Metagenome Family F084864

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084864
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	122 residues
Representative Sequence	MITAGLVGCLVAASLVLTLMAFPRRFSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCIASLFLTAVGATLVVTARERNEGSTAALRATLIAAIPGMLLLALMLYGFVNAML
Number of Associated Samples	94
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	36.61 %
% of genes near scaffold ends (potentially truncated)	36.61 %
% of genes from short scaffolds (< 2000 bps)	84.82 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.286 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (16.964 % of family members)
Environment Ontology (ENVO)	Unclassified (30.357 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.893 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 84.55% β-sheet: 0.00% Coil/Unstructured: 15.45%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF08818	DUF1801	15.18
PF01965	DJ-1_PfpI	3.57
PF11746	DUF3303	2.68
PF12973	Cupin_7	2.68
PF08241	Methyltransf_11	1.79
PF02653	BPD_transp_2	1.79
PF13407	Peripla_BP_4	1.79
PF00753	Lactamase_B	1.79
PF01872	RibD_C	1.79
PF00285	Citrate_synt	1.79
PF01546	Peptidase_M20	1.79
PF03551	PadR	1.79
PF00903	Glyoxalase	0.89
PF03475	3-alpha	0.89
PF05163	DinB	0.89
PF03629	SASA	0.89
PF14306	PUA_2	0.89
PF14534	DUF4440	0.89
PF00009	GTP_EFTU	0.89
PF00326	Peptidase_S9	0.89
PF00300	His_Phos_1	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	15.18
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	15.18
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	15.18
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.79
COG0372	Citrate synthase	Energy production and conversion [C]	1.79
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.79
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.79
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.79
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.79
COG2258	N-hydroxylaminopurine reductase YiiM, contains MOSC domain	Defense mechanisms [V]	0.89
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.29 %
Unclassified	root	N/A	35.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.29 %
Unclassified	root	N/A	35.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.29 %
Unclassified	root	N/A	35.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.71 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	13.39 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	7.14 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	7.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.46 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.71 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	11.61 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	7.14 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.46 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.79 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.71 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	11.61 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	7.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.46 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.79 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1.79 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.89 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.71 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	11.61 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.46 %
Chroococcidiopsidales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Chroococcidiopsidales	1.79 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.79 %
unclassified Chloroflexia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia	0.89 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.71 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	11.61 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.46 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	1.79 %
Chroococcidiopsidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Chroococcidiopsidales → Chroococcidiopsidaceae	1.79 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.89 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.71 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	11.61 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.46 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1.79 %
Chroococcidiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Chroococcidiopsidales → Chroococcidiopsidaceae → Chroococcidiopsis	1.79 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.89 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.71 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	11.61 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.46 %
unclassified Chroococcidiopsis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Chroococcidiopsidales → Chroococcidiopsidaceae → Chroococcidiopsis → unclassified Chroococcidiopsis	1.79 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1.79 %
Mycobacterium marinum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium marinum	0.89 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.71 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	11.61 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	7.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.46 %
Chroococcidiopsis sp. CCMEE 29	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Chroococcidiopsidales → Chroococcidiopsidaceae → Chroococcidiopsis → unclassified Chroococcidiopsis → Chroococcidiopsis sp. CCMEE 29	1.79 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1.79 %
Mycobacterium marinum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium marinum	0.89 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886007\|SwRhRL2b_contig_1479522	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	840	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0720527	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11245912	Not Available	903	Open in IMG/M
3300000550\|F24TB_11171877	Not Available	515	Open in IMG/M
3300000559\|F14TC_100012257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1832	Open in IMG/M
3300001431\|F14TB_100032569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1953	Open in IMG/M
3300003987\|Ga0055471_10154797	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300003999\|Ga0055469_10235822	Not Available	580	Open in IMG/M
3300004114\|Ga0062593_100493530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1132	Open in IMG/M
3300004157\|Ga0062590_101895676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300004463\|Ga0063356_100589145	All Organisms → cellular organisms → Bacteria	1499	Open in IMG/M
3300004463\|Ga0063356_103820976	Not Available	648	Open in IMG/M
3300004463\|Ga0063356_103962718	Not Available	637	Open in IMG/M
3300004479\|Ga0062595_101488730	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	623	Open in IMG/M
3300004480\|Ga0062592_100062800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2096	Open in IMG/M
3300004643\|Ga0062591_100707177	All Organisms → cellular organisms → Bacteria → Acidobacteria	912	Open in IMG/M
3300004643\|Ga0062591_100917467	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	823	Open in IMG/M
3300005289\|Ga0065704_10342095	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	822	Open in IMG/M
3300005294\|Ga0065705_10119383	All Organisms → cellular organisms → Bacteria	3110	Open in IMG/M
3300005295\|Ga0065707_11049582	Not Available	527	Open in IMG/M
3300005331\|Ga0070670_101371989	Not Available	648	Open in IMG/M
3300005365\|Ga0070688_100659731	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	806	Open in IMG/M
3300005440\|Ga0070705_100661581	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	816	Open in IMG/M
3300005444\|Ga0070694_101419671	Not Available	586	Open in IMG/M
3300005444\|Ga0070694_101940585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium marinum	503	Open in IMG/M
3300005455\|Ga0070663_101346228	Not Available	631	Open in IMG/M
3300005456\|Ga0070678_100423526	Not Available	1161	Open in IMG/M
3300005459\|Ga0068867_101166281	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300005544\|Ga0070686_101077690	Not Available	662	Open in IMG/M
3300005564\|Ga0070664_100493481	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300005577\|Ga0068857_100978168	Not Available	814	Open in IMG/M
3300005617\|Ga0068859_100090981	All Organisms → cellular organisms → Bacteria	3102	Open in IMG/M
3300005719\|Ga0068861_100861323	Not Available	855	Open in IMG/M
3300005937\|Ga0081455_10531511	Not Available	782	Open in IMG/M
3300006844\|Ga0075428_100152754	All Organisms → cellular organisms → Bacteria	2508	Open in IMG/M
3300006845\|Ga0075421_100061531	All Organisms → cellular organisms → Bacteria	4745	Open in IMG/M
3300006845\|Ga0075421_100141411	All Organisms → cellular organisms → Bacteria → Proteobacteria	3012	Open in IMG/M
3300006845\|Ga0075421_100221170	All Organisms → cellular organisms → Bacteria	2333	Open in IMG/M
3300006845\|Ga0075421_101054067	All Organisms → cellular organisms → Bacteria → Acidobacteria	917	Open in IMG/M
3300006846\|Ga0075430_101144806	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300006846\|Ga0075430_101261928	Not Available	608	Open in IMG/M
3300006847\|Ga0075431_100992980	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300006854\|Ga0075425_102525967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300009094\|Ga0111539_10795636	Not Available	1101	Open in IMG/M
3300009100\|Ga0075418_11035618	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300009148\|Ga0105243_11587536	Not Available	680	Open in IMG/M
3300009156\|Ga0111538_12009633	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300009176\|Ga0105242_11082004	Not Available	815	Open in IMG/M
3300009553\|Ga0105249_11309499	Not Available	796	Open in IMG/M
3300010397\|Ga0134124_11837865	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	640	Open in IMG/M
3300010399\|Ga0134127_13593922	Not Available	508	Open in IMG/M
3300010403\|Ga0134123_11213647	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	785	Open in IMG/M
3300011119\|Ga0105246_10090415	All Organisms → cellular organisms → Bacteria	2204	Open in IMG/M
3300011423\|Ga0137436_1037565	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1223	Open in IMG/M
3300011429\|Ga0137455_1159315	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300011439\|Ga0137432_1029978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Chroococcidiopsidales → Chroococcidiopsidaceae → Chroococcidiopsis → unclassified Chroococcidiopsis → Chroococcidiopsis sp. CCMEE 29	1597	Open in IMG/M
3300011440\|Ga0137433_1052421	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300012897\|Ga0157285_10224187	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	603	Open in IMG/M
3300012901\|Ga0157288_10125171	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	734	Open in IMG/M
3300012904\|Ga0157282_10186247	Not Available	660	Open in IMG/M
3300012948\|Ga0126375_10697579	Not Available	790	Open in IMG/M
3300012958\|Ga0164299_10032821	All Organisms → cellular organisms → Bacteria → Proteobacteria	2274	Open in IMG/M
3300013096\|Ga0157307_1147686	Not Available	544	Open in IMG/M
3300014866\|Ga0180090_1043546	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	754	Open in IMG/M
3300015371\|Ga0132258_12615987	All Organisms → cellular organisms → Bacteria → Proteobacteria	1260	Open in IMG/M
3300018083\|Ga0184628_10221097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Chroococcidiopsidales → Chroococcidiopsidaceae → Chroococcidiopsis → unclassified Chroococcidiopsis → Chroococcidiopsis sp. CCMEE 29	992	Open in IMG/M
3300019356\|Ga0173481_10146916	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	968	Open in IMG/M
3300019356\|Ga0173481_10288954	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300019361\|Ga0173482_10028055	All Organisms → cellular organisms → Bacteria → Acidobacteria	1673	Open in IMG/M
3300025901\|Ga0207688_10604224	Not Available	691	Open in IMG/M
3300025917\|Ga0207660_10522044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	964	Open in IMG/M
3300025960\|Ga0207651_10886328	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	794	Open in IMG/M
3300025961\|Ga0207712_11331871	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	642	Open in IMG/M
3300026035\|Ga0207703_12058954	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300026062\|Ga0208654_1016114	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300026089\|Ga0207648_10222040	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1680	Open in IMG/M
3300026095\|Ga0207676_11070825	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	796	Open in IMG/M
3300026095\|Ga0207676_12429253	Not Available	521	Open in IMG/M
3300026118\|Ga0207675_100752953	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	985	Open in IMG/M
3300026121\|Ga0207683_10469353	Not Available	1161	Open in IMG/M
3300027682\|Ga0209971_1079638	Not Available	797	Open in IMG/M
3300027717\|Ga0209998_10095831	Not Available	731	Open in IMG/M
3300027876\|Ga0209974_10051192	Not Available	1388	Open in IMG/M
3300027907\|Ga0207428_10018882	All Organisms → cellular organisms → Bacteria	5881	Open in IMG/M
3300027907\|Ga0207428_11243782	Not Available	517	Open in IMG/M
3300027909\|Ga0209382_10033556	All Organisms → cellular organisms → Bacteria	6174	Open in IMG/M
3300027909\|Ga0209382_10035762	All Organisms → cellular organisms → Bacteria	5970	Open in IMG/M
3300027909\|Ga0209382_10240524	All Organisms → cellular organisms → Bacteria	2059	Open in IMG/M
3300028380\|Ga0268265_10471369	All Organisms → cellular organisms → Bacteria → Proteobacteria	1177	Open in IMG/M
3300028812\|Ga0247825_10050631	All Organisms → cellular organisms → Bacteria	2757	Open in IMG/M
3300028889\|Ga0247827_10815527	Not Available	619	Open in IMG/M
3300031538\|Ga0310888_10010026	All Organisms → cellular organisms → Bacteria	3584	Open in IMG/M
3300031538\|Ga0310888_10416019	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	791	Open in IMG/M
3300031538\|Ga0310888_10731130	Not Available	609	Open in IMG/M
3300031547\|Ga0310887_10118023	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1344	Open in IMG/M
3300031547\|Ga0310887_10486302	Not Available	741	Open in IMG/M
3300031716\|Ga0310813_10110519	All Organisms → cellular organisms → Bacteria	2153	Open in IMG/M
3300031854\|Ga0310904_10000926	All Organisms → cellular organisms → Bacteria	8817	Open in IMG/M
3300031854\|Ga0310904_11104544	Not Available	568	Open in IMG/M
3300031892\|Ga0310893_10081520	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300031908\|Ga0310900_10104862	All Organisms → cellular organisms → Bacteria	1823	Open in IMG/M
3300031913\|Ga0310891_10047783	Not Available	1190	Open in IMG/M
3300031940\|Ga0310901_10461169	Not Available	563	Open in IMG/M
3300031943\|Ga0310885_10868572	Not Available	515	Open in IMG/M
3300031944\|Ga0310884_10153157	Not Available	1192	Open in IMG/M
3300032075\|Ga0310890_10826027	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	735	Open in IMG/M
3300032075\|Ga0310890_11868169	Not Available	500	Open in IMG/M
3300032122\|Ga0310895_10128357	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300032180\|Ga0307471_103877483	Not Available	529	Open in IMG/M
3300032211\|Ga0310896_10088688	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1357	Open in IMG/M
3300034147\|Ga0364925_0100100	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300034148\|Ga0364927_0112429	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	764	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	56.25%
Host-Associated	Host-Associated	43.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.11%
Plants	Host-Associated → Plants	43.75%
Aquatic	Environmental → Aquatic	7.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.54%
Sediment	Environmental → Aquatic → Sediment	5.36%
Marine	Environmental → Aquatic → Marine	1.79%
Floodplain	Environmental → Terrestrial → Floodplain	1.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.64%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.07%
Loam	Environmental → Terrestrial → Soil → Loam	8.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.68%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.79%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.79%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.64%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	16.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.07%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.57%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.79%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	16.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	15.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.04%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.36%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	5.36%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.68%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.79%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886007	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300014866	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT890_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026062	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1 (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwRhRL2b_0054.00002330	2162886007	Switchgrass Rhizosphere	MITAGLVGCLVAASLVLTLMAFPRRFSFAARYRRIAWLPVAALLIEGLLWRPVLTKLSYFAVIPLLLTCIASLFLTAVGATLVATARERNESSTATLRATLIAAIPGMLLLALMLYGFVNAML
ICChiseqgaiiDRAFT_07205271	3300000033	Soil	MITLGLMGCLVAAGLVLALMAFPRRFSLAARYRQVAWLPVAALLIQGILWKPVLTKLSYFAVVPLLLTCIASLFLAAVGATLVVTARERNERSSALVRATLIAAIPGMLLFAAMLYGFVKTLL*
ICChiseqgaiiFebDRAFT_112459121	3300000363	Soil	ASLVVTLMAFPRRFSVAERYRRVAWVPVAALLIEGVLWKPVLTKLGYFFVVPLLLTCIASLFLAAVGATLVVTARERNERSSALVRATLIAAIPGMLLFAAMLYGFVKTLL*
F24TB_111718771	3300000550	Soil	VITIGLLGCLVAAGLVLTLMAYPRRFSFAARYRRVAWLPVTALLIEGVLWKPVLTKLSYFAVVPLLLTCIASLFLTAVGVTLVVTARERNEGSTAALRATLIAAIPGMLFLALMVYGFVNAML*
F14TC_1000122573	3300000559	Soil	MITVGLVGCLVAASLVLTLMAFPRRFSFAARYQRIAWLPVAALLIEGVLWKPVLTKLSYFAVVPLLLTCIASLFLTAVGVTLVVTARERNEGSTAALRATLIAAIPGMLFLALMVYGFVNAML*
F14TB_1000325693	3300001431	Soil	MITVGLVGCLVAASLVLTLMAFPRRFSFAARYQRIAWPPVAAXLIEGVLWRPVLTKLSYFAVVPLLLTCIASLFLTAVGVTLVVTARERNEGSTAALRATLIAAIPGMLFLALMVYGFVNAML*
Ga0055471_101547972	3300003987	Natural And Restored Wetlands	MITLGLLGCLVAASVLALIAFPRTASFAQTYRRVAWLPVAALLIEGLLWKPLLTRLSYFAVIPPLLTCVVSLFLAAIGATLVVTSRERHEGSAAMLRATLIAAIPGMLLLALMFYGFVTAILEK*
Ga0055469_102358222	3300003999	Natural And Restored Wetlands	MITLGLLGCLVAASVLALIAFPRTASFAQTYRRVAWLPVAALLIEGLLWKPLLTRLSYFAVIPPLLTCVVSLFLAAIGATLVVTSRERHEGSAAMLRATLIAAIPGMLL
Ga0062593_1004935302	3300004114	Soil	MIALGLVGCLVAVGLVLTLLAFPRRFTVAARYRRVAWLPATALLIEGALWQPVLSKLSYFAVIPLLLTSAASLVLAAVGAILVVMARERNDDPVALLGATAIAAIPGLLLAALMFYGYISAVI*
Ga0062590_1018956762	3300004157	Soil	SRMIALGLVGCLVAVGLVLTLLAFPRRFTVAARYRRVAWLPATALLIEGALWQPVLSKLSYFAVIPLLLTSAASLVLAAVGAILVVMARERNDDPVALLGATAIAAIPGLLLAALMFYGYISAVI*
Ga0063356_1005891453	3300004463	Arabidopsis Thaliana Rhizosphere	MLTVGLVGCLVAASLVLTLMAFPRRFSVAERYRRVAWVPVAALLIEGVLWKPVLTKLGYFFVVPLLLTCIASLLLAAVGATLVATARERNESSTAMLRATLIAAIPGMLFLALMLYGFVNAMF*
Ga0063356_1038209762	3300004463	Arabidopsis Thaliana Rhizosphere	MITVGLVGLLVAAGLVLTLMAFPRRSSFAARYRRVAWIPVAALLIEGVLWKPVLTKLSYFAIVPPLLTCIASLFLAAVGATLVVTTRERNEGSTEVLRATLIAAIPGMLLLGLMVYEFVDAVLR*
Ga0063356_1039627181	3300004463	Arabidopsis Thaliana Rhizosphere	ITLGLLGCLLAASVLALIAFPGTSSFAQRYRRVAWLPVAALLIEGILWKPFLARLSYFAVVPLLFTCVASLFLAAIGATWLATSRGRKEGSTEMRRATLVAAIPGMLLLALMFYGFVNAILEK*
Ga0062595_1014887302	3300004479	Soil	MITLGLVGCLVAASVLALIALPRASSFAQRYRRVAWLPVAALLIEGILWKPFLTRLSYFAVVPLLLTCVASLFLAAIGATLVATSHGRKEGSAEILRATLVAAIPGMLLLVLMVYGFVNAILEK*
Ga0062592_1000628001	3300004480	Soil	MIALGLVGCLVAVGLVLTLLAFPRRFTVAARYRRVAWLPATALLIEGALWQPVLSKLSYFAVIPLLLTSAASLVLAAVGAILVVMARERNDDPVALLGATAIAAIPGLLLAALMFYG
Ga0062591_1007071771	3300004643	Soil	MIALGLVGCLVAVGLVLTLLAFPRRFTVAARYRRVAWLPATALLIEGALWQPVLSKLSYFAVIPLLLTSAASLVLAAVGAILVVMARERNDDPVALLGATAIA
Ga0062591_1009174672	3300004643	Soil	VLALIALPRASSFAQRYRRVAWLPVAALLIEGILWKPFLTRLSYFAVVPLLLTCVASLFLAAIGATLVATSHGRKEGSAEILRATLVAAIPGMLLLVLMVYGFVNAILEK*
Ga0065704_103420951	3300005289	Switchgrass Rhizosphere	MITAGLVGCLVAASLVLTLMAFPRRFSFAARYRRIAWLPVAALLIEGLLWRPVLTKLSYFAVIPLLLTCIASLFLTAVGATLVATARERNESSTATLRATLIAAIPGMLLLALMLYGFVNAML*
Ga0065705_101193832	3300005294	Switchgrass Rhizosphere	MITVGLMGCLVAASLVLTLMAFPRRVSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYAAVIPLLLTCIASLFLTAVGATLVVTARERNEGSAAALRATLVAAIPGMLLLALMLYGFVNAML*
Ga0065707_110495821	3300005295	Switchgrass Rhizosphere	MITVGLVGCLVAVSLVLTLMVFPRRFSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYAAVIPLLLTCIASLFLTAVGATLVVTARERNEGSAAALRATLVAAIPGMLLLALMLYGFVNAML*
Ga0070670_1013719892	3300005331	Switchgrass Rhizosphere	MITAGLVGCLVAASLVLTLMAFPRRFSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCIASLFLAAVGATLVVTARERNEGSTAVLRATLVAAIPGMLLLALMLYGFVNAML*
Ga0070688_1006597311	3300005365	Switchgrass Rhizosphere	LALIALPRASSFAQRYRRVAWLPVAALLIEGILWKPFLTRLSYFAVVPLLLTCVASLFLAAIGATLVATSHGRKEGSAEILRATLVAAIPGMLLLVLMVYGFVNAILEK*
Ga0070705_1006615812	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VITVGLVGCLVAASLVLTLMAFPRRFSFAARYQRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCIASLFLAAVGATLVVTARERNEGSTAVLRATLVAAIPGMLLLALMLYGFVNAML*
Ga0070694_1014196711	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MITVGLMGCLVAASLVLTLMAFPRRVSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYAAVIPLLLTCIASLFLTAVGATLVVTARERNEGSAAALRATLVAAIPGMLLLALMLYGFVN
Ga0070694_1019405851	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	GNPESSRMITVGLVGCLVAAGLVVTLMAFPRRGSVAARYRRVAWLPVAALLVEGVLWKPVFTKLSYFAVVPLLLTCIASLFLTAVGATLVVTARERNEGFTAALRATLIAAIPGMLFLALMLYGFVNALL*
Ga0070663_1013462282	3300005455	Corn Rhizosphere	CSRMITAGLVGCLVAASLVLTLMAFPRRFSFAARYRRVAWLPVAALLIEGILWKPVLTKLSYFAVIPLLLTCIASLFLTAVGATLVVTARERNEGSTAALRATVIAAIPGMLFLALMLYGFVNAML*
Ga0070678_1004235262	3300005456	Miscanthus Rhizosphere	MITVGLAGCLVAASLVLTLMAFPRRFSFAARYRRVAWLPVAALLIEGLLWKPVLTKLSYFAVIPLLLTCIASLFLTAVGATLVVTARERNEGSTAALRATLIAAIPGMLLLALMLYGFVNAML*
Ga0068867_1011662812	3300005459	Miscanthus Rhizosphere	MITVGLVGCLVAASLVLTLMAFPRRFSFAARYQRVAWLPVAALLIEGVLWKPVFTKLSYFAVVPLLLTCIASLFLTAVGATLVVTARERNEGSTAALRATLIAAIPGMLLLALMLYGFV
Ga0070686_1010776902	3300005544	Switchgrass Rhizosphere	VGLAGCLVAASLVLTLMAFPRRFSFAARYRRVAWLPVAALLIEGLLWKPVLTKLSYFAVIPLLLTCIASLFLTAVGATLVVTARERNEGSTAALRATLIAAIPGMLLLALMLYGFVNAML
Ga0070664_1004934811	3300005564	Corn Rhizosphere	ALPRASSFAQRYRRVAWLPVAALLIEGILWKPFLTRLSYFAVVPLLLTCVASLFLAAIGATLVATSHGRKEGSAEILRATLVAAIPGMLLLVLMVYGFVNAILEK*
Ga0068857_1009781682	3300005577	Corn Rhizosphere	MGCLVAASLVLTLMAFPRRVSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYAAVIPLLLTCIASLFLTAVGATLVVTARERNEGSAAALRATLVAAIPGMLLLALMLYGFVNAML*
Ga0068859_1000909812	3300005617	Switchgrass Rhizosphere	LAPFSACAYRPGKQQMITLGLVGCLVAASVLALIALPRASSFAQRYRRVAWLPVAALLIEGILWKPFLTRLSYFAVVPLLLTCVASLFLAAIGATLVATSHGRKEGSAEILRATLVAAIPGMLLLVLMVYGFVNAILEK*
Ga0068861_1008613232	3300005719	Switchgrass Rhizosphere	MITVGLVGCLVAASLVLTLMAFPRRFSFAARYQRVAWLPVAALLIEGVLWKPVFTKLSYFAVVPLLLTCIASLFLTAVGATLVVTARERNEGFTAALRATLIAAIPGMLFLALMLYGFVNALL*
Ga0081455_105315112	3300005937	Tabebuia Heterophylla Rhizosphere	MITLGLLGCLVAAGLVLTLMVFTRRFNFAMTYPRVAWLPVAALLIEGILWKPLLTRLSYFAVVPLLLTCIASFFLTAAGAALVVTARARNEQSSEVLRVTLIAAIPALLLLALMFYGFVNTIFGSRGA*
Ga0075428_1001527543	3300006844	Populus Rhizosphere	MITVGLVACLVAASLVLTLMVFPRRFSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCIASLFLTAVGATLVVTARERNEGSTAALRATLIAAIPGMLLLALMLYGFVNAML*
Ga0075421_1000615313	3300006845	Populus Rhizosphere	VIALGFLGCLVAAGLLLTLMTFPRHFNLGATYRRVAWLPVAALVIEAILWKPLLTKLSYFAVVPLLLTCVASLVLTVVGATLGAAARERNESSKEMLRATVIAAIPGILLLALMLYGLVNTMLQGHRA*
Ga0075421_1001414115	3300006845	Populus Rhizosphere	MITLGLIGCLAAAGLVLTLLAFPRRFSFAARYQRVAWLPMTALLIEGVLWQPVLTKLSYFAVVPLLLTAVASLVLAAVGATLVVMARERNDDAAGLLGATAIAAIPGMLLLALMFYGFINAVI*
Ga0075421_1002211704	3300006845	Populus Rhizosphere	MITLGLLGCLVAASLVLTLMAFPRRFKFAVTYPRVAWLPAAALLIEGILWKPLLTRLSYFAVVPLLLTCIASLFLTAVGATLVATARARNEGSSEVLRATLIAAIPALLFLALMFYGFVNTILGSRGA*
Ga0075421_1010540672	3300006845	Populus Rhizosphere	MITLGLIGCLVAVGLVLALLAFPRRYSFAARYRRVAWLPVAALLIEGVLWQPVLTKLSYFAVVPLLLTSVASLVLTAVGAALVVMARERNDDAAGLLGATAIAAIP
Ga0075430_1011448061	3300006846	Populus Rhizosphere	LMTFPRHFNLGATYRRVAWLPVAALVIEAILWKPLLTKLSYFAVVPLLLTCVASLVLTVVGATLGAAARERNESSKEMLRATVIAAIPGILLLALMLYGLVNTMLQGHRA*
Ga0075430_1012619282	3300006846	Populus Rhizosphere	MITLGLIGCLVAVGLVLALLAFPRRYSFAARYRRVAWLPVAALLIEGVLWQPVLTKLSYFAVVPLLLTSVASLVLTAVGAALVVMARERNDDAAGLLGATAIAAIPGMLLLALMFYGFINAVI*
Ga0075431_1009929802	3300006847	Populus Rhizosphere	MITLGLIGCLAAAGLVLTLLAFPRRFSFAARYQRVAWLPMTALLIEGVLWQPVLTKLSYFAVVPLLLTAVASLVLAAVGATLVVMARERNDDAAGLLGATAIAAIPGMLLLALMFYGFIKAVI*
Ga0075425_1025259671	3300006854	Populus Rhizosphere	MITLGLLGCLVAASVVLTFMAFPRRFNVAVTYPRLAWLPVAVLLIEGILWKPLLTRLSYFAVVPLLLTCIASFFLTAVGATLVATARARNEGSSEVLRATLIAAIPALLLLALMFYGF
Ga0111539_107956361	3300009094	Populus Rhizosphere	MITLGLLGCLVAASLLLTLMAFPRRFNVAVSYPRVAWLPVAALLIEGILWKPLLTRLNYFAVVPLLLTCIASFFLTAIGATLVATARARNEASSEVLRATLIAAIPALLLLALMFYGFVKTMLGSSGA*
Ga0075418_110356181	3300009100	Populus Rhizosphere	VIALGFLGCLVAAGLLLTLMTFPRHLNLGATYRRVAWLPVAALVIEAILWKPLLTKLSYFAVVPLLLTCVASLVLTVVGATLGAAARERNESSKEMLRATVIAAIPGILLLALMLYGLVNTMLQGHRA*
Ga0105243_115875361	3300009148	Miscanthus Rhizosphere	MITLGLVGCLVAASVLALIALPRASSFAQRYRRVAWLPVAALLIEGILWKPFLTRLSYFAVVPLLLTCVASLFLAAIGATLVATSHGRKEGSAEILRATL
Ga0111538_120096331	3300009156	Populus Rhizosphere	MITLGLLGCLVVASLVLALVAFPRSINFVTTYRRVAWLPVAALLIEGILWKPLLARLSYFAVIPLLLTCFASVCLTAVGATLVATSRERNEGSRETLRATLIAAIPGLLLLALMFYGFVSAILKT*
Ga0105242_110820042	3300009176	Miscanthus Rhizosphere	MITVGLAGCLVAASLVLTLMAFPRRFSFAARYRRVAWLPVAALLIEGLLWKPVLTKLSYFAVIPLLLTCIASLFLTAVGATLVVTARERNEGSTATLRATLIAAIPGMLFLALMLYGFVNAML*
Ga0105249_113094991	3300009553	Switchgrass Rhizosphere	MITVGLVGCLVAASLVLTLMVFPRRFSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCIASLFLAAVGATLVVTARERNEGSTAVLRATLIAAIPGMLLLALMLYGFVKAML*
Ga0134124_118378652	3300010397	Terrestrial Soil	ASVLALIALPRASSFAQRYRRVAWLPVAALLIEGILWKPFLTRLSYFAVVPLLLTCVASLFLAAIGATLVATSHGRKEGSAEILRATLVAAIPGMLLLVLMVYGFVNAILEK*
Ga0134127_135939221	3300010399	Terrestrial Soil	MITVGLLGCLVAASLVLTLMAFPRRFSFAARYQRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCIASLFLTAVGATLVVTARERHEGFTAALRATLIAAIPGMLFLALMLYGFVNAWL*
Ga0134123_112136472	3300010403	Terrestrial Soil	MITVGLLGCLVAASLVLTLMAFPRRFSFAARYQRVAWLPVAALLIEGVLWKPVFTKLSYFAVVPLLLTCIASLFLTAVGATLVMTARERNEGSTAALRATLIAAIPGMLFLALMLYGFVNAML*
Ga0105246_100904153	3300011119	Miscanthus Rhizosphere	MITLGLVGCLVAASVLALIALPRSSSFVQMYRRVAWLPVAALLIEGILWKPFLTRLSYFAVVPLLLTCVASLFLAAIGATLVATSHGRKEGSAEILRATLVAAIPGMLLLVLMVYGFVNAILEK*
Ga0137436_10375652	3300011423	Soil	MITLGLVGCLVAASLVLTLMAFPRRFSFATRYRRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCLASLFLTAVGATLVVTARERNEGSTAALRATLIAAIPGMLLLALMLYGFVNAML*
Ga0137455_11593151	3300011429	Soil	MITLGLVGCLVAASLVLTLMAFPRRFSFATRYRRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCLASLFLTAVGATLVVTARERNEGSTAALRATLI
Ga0137432_10299781	3300011439	Soil	MITLGLVGCLVAASLVLTLMAFPRRFSFAARYQRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCIASLFLTAVGATLVVTARERNEGSTAALRATLIAAIPGMLLLALMLYGFVNAML*
Ga0137433_10524212	3300011440	Soil	MITLGLVGCLVAASLVLTLMAFPRRFSFAARYQRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCIASLFLTAVGATLVGTARERNEGSTAAPRATLIAAIPGMLLLALMLYGFVNAML*
Ga0157285_102241872	3300012897	Soil	MITVGLAGCLVAASLVLTLMAFPRRFSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCIASLFLAAVGATLVVTARERNEGSTAVLRATLVAAIPGMLLLALMLYGFVNAML*
Ga0157288_101251712	3300012901	Soil	MITVGLAGCLVAASLVLTLMAFPRRFSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYAAVIPLLLTCIASLFLTAVGATLVVTARERNEGSTAVLRATLIAAIPGMLLLALMLYGFVNAML*
Ga0157282_101862472	3300012904	Soil	MITVGLAGCLVAASLVLTLMAFPRRFSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCIASLFLADVGATLVVTARERNEGSTAVLRATLVAAIPGMLLLALMLYGFVNAML*
Ga0126375_106975792	3300012948	Tropical Forest Soil	MIALGLLGCLVAATLVATLMAFPRRFNFAATYCRVAWLPVAALLIEAILWKPLLTRLSYFAVVPLLLTCIASFFLAAVGATLVATARARNEGSGDVLRATLIAAIPAMLLLALMFYGFVSTILGNSGA*
Ga0164299_100328212	3300012958	Soil	MITLGLLGCLVAASVVLTLMAFPRRFNVAVTYPRLAWLPVAVLLIEGILWKPLLTRLSYFAVVPLLLTCIASFFLTAVGATLVATARARNEGSSEVLRATLIAAIPALLLLALMFYGFVSTILGSSGA*
Ga0157307_11476861	3300013096	Soil	VITVGLVGCLVAASLALTLMAFPRRFSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCIASLFLAAVGATLVVTARERNEGSTAVLRATLVAAIPGMLL
Ga0180090_10435462	3300014866	Soil	MITLGLVGCIVAASLVLTLMAFPRRFSFAARYQRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCIASLFLTAVGATLVVTARERNEGSTGALRATLIAAIPGMLLLALMLYGFVNAML*
Ga0132258_126159872	3300015371	Arabidopsis Rhizosphere	MITLGLLGCLVAASLLLTLMAFPRRFNFAVTYPRVAWLPVAALLIEGILWKPLLTRLNYFAVVPLLLTCIASFFLTAIGATLVATARARNEASSEVLRATLIAAIPALLLLALMFYGFVSTILGSSGA*
Ga0184628_102210972	3300018083	Groundwater Sediment	MITLGLVGCLVAASLVLTLMAFPRRFSFATRYRRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCLASLFLTAVGATLVVTARERNEGSTAALRA
Ga0173481_101469162	3300019356	Soil	VITVGLVGCLVAASLALTLMAFPRRFSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCIASLFLAAVGATLVVTARERNEGSTAVLRATLVAAIPGMLLLALMLYGFVNAML
Ga0173481_102889541	3300019356	Soil	TLTVSRMIALGLVGCLVAVGLVLTLLAFPRRFTVAARYRRVAWLPATALLIEGALWQPVLSKLSYFAVIPLLLTSAASLVLAAVGAILVVMARERNDDPVALLGATAIAAIPGLLLAALMFYGYISAVI
Ga0173482_100280552	3300019361	Soil	MAFPRRFSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCIASLFLAAVGATLVVTARERNEGSTAVLRATLVAAIPGMLLLALMLYGFVNAML
Ga0207688_106042242	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MITLGLVGCLVAASVLALIALPRASSFAQRYRRVAWLPVAALLIEGILWKPFLTRLSYFAVVPLLLTCVASLFLAAIGATLVATSHGRKEGSAEILRATLVAAIPGMLLLVLMVYGFVNAILEK
Ga0207660_105220442	3300025917	Corn Rhizosphere	MITVGLLGCLVAASLVLTLMAFPRRFSFAARYQRVAWLPVAALLIEGILWKPVLTKLSYAAVIPLLLTCIASLFLTAVGATLVVTARERNEGSAAALRATLVAAIPGMLLLALMLYGFVNAML
Ga0207651_108863282	3300025960	Switchgrass Rhizosphere	GKQQMITLGLVGCLVAASVLALIALPRASSFAQRYRRVAWLPVAALLIEGILWKPFLTRLSYFAVVPLLLTCVASLFLAAIGATLVATSHGRKEGSAEILRATLVAAIPGMLLLVLMVYGFVNAILEK
Ga0207712_113318711	3300025961	Switchgrass Rhizosphere	MITVGLVGCLVAASLVLTLMVFPRRFSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCIASLFLTAVGATLVLTARERNEGSTAALRATLIAAIPGMLLLALMLYG
Ga0207703_120589541	3300026035	Switchgrass Rhizosphere	MITLGLLGCLVAASVLALIALPRASSFAQRYRRVAWLPVAALLIEGILWKPFLTRLSYFAVVPLLLTCVASLFLAAIGATLVATSHGRKEGSAEILRATLVAAIPGMLLLVLMVYGFVNA
Ga0208654_10161142	3300026062	Natural And Restored Wetlands	MITLGLMGCLVAAGLVLALMAFPRRFSLAARYRQVAWLPVAALLIQGILWKPVLTKLSYFAVVPLLLTCIASLFLAAVGATLVVTARERNERSSALVRATLIAAIPGMLLFAAMLYGFVKTLL
Ga0207648_102220403	3300026089	Miscanthus Rhizosphere	MITVGLVGCLVAASLVLTLMAFPRRFSFAARYQRVAWLPVAALLIEGVLWKPVFTKLSYFAVVPLLLTCIASLFLTAVGATLVVTARERNEGSTAALRATVIAAIPGMLFLALMLYGFVNALL
Ga0207676_110708252	3300026095	Switchgrass Rhizosphere	QMITLGLVGCLVAASVLALIALPRASSFAQRYRRVAWLPVAALLIEGILWKPFLTRLSYFAVVPLLLTCVASLFLAAIGATLVATSHGRKEGSAEILRATLVAAIPGMLLLVLMVYGFVNAILEK
Ga0207676_124292532	3300026095	Switchgrass Rhizosphere	VITVGLVGCLVAASLALTLMAFPRRFSFAARYRRVAWLPVAALLIEGLLWRPVLTKLSYFAVIPLLLTCIASLFLAAVGATLVVTARERNEGSTAVLRATLVAAIPGMLLLALMLYGFVNAML
Ga0207675_1007529532	3300026118	Switchgrass Rhizosphere	MITVGLVGCLVAASLVLTLMAFPRRFSFAARYQRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCIASLFLTAVGATLVVTARERHEGFTAALRATLIAAIPGMLFLALMLYGFVNAML
Ga0207683_104693531	3300026121	Miscanthus Rhizosphere	MITVGLAGCLVAASLVLTLMAFPRRFSFAARYRRVAWLPVAALLIEGLLWKPVLTKLSYFAVIPLLLTCIASLFLTAVGATLVVTARERNEGSTAALRATLIAAIPGMLLLALMLYGFVNAML
Ga0209971_10796382	3300027682	Arabidopsis Thaliana Rhizosphere	TLMAFPRRFSFAARYRRIAWLPVAALLIEGLLWRPVLTKLSYFAVIPLLLTCIASLFLTAVGATLVATARERNESSTATLRATLITAIPGMLLLALMLYGFVNAML
Ga0209998_100958311	3300027717	Arabidopsis Thaliana Rhizosphere	MITAGLVGCLVAASLVLTLMAFPRRFSFAARYRRIAWLPVAALLIEGLLWRPVLTKLSYFAVIPLLLTCIASLFLTAVGATLVATARERNESSTATLRATLITAIPGMLLLALMLYGFVNAML
Ga0209974_100511922	3300027876	Arabidopsis Thaliana Rhizosphere	MITAGLVGCLVAASLVLTLMAFPRRFSFAARYRRIAWLPVAALLIEGLLWRPVLTKLSYFAIVPPLLTCIASLFLTAVGATLVATARERNESSTATLRATLIAAIPGMLLLALMLYGFVNAML
Ga0207428_100188828	3300027907	Populus Rhizosphere	MITVGLVACLVAASLVLTLMVFPRRFSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCIASLFLTAVGATLVVTARERNEGSTAALRATLIAAIPGMLLLALMLYGFVNAML
Ga0207428_112437821	3300027907	Populus Rhizosphere	WLSASAAGVGLISYCGGRSLQPMITLGLLGCLVAASLLLTLMAFPRRFNVAVSYPRVAWLPVAALLIEGILWKPLLTRLNYFAVVPLLLTCIASFFLTAIGATLVATARARNEASSEVLRATLIAAIPALLLLALMFYGFVKTMLGSSGA
Ga0209382_100335565	3300027909	Populus Rhizosphere	VIALGFLGCLVAAGLLLTLMTFPRHFNLGATYRRVAWLPVAALVIEAILWKPLLTKLSYFAVVPLLLTCVASLVLTVVGATLGAAARERNESSKEMLRATVIAAIPGILLLALMLYGLVNTMLQGHRA
Ga0209382_100357627	3300027909	Populus Rhizosphere	MITLGLLGCLVAASLVLTLMAFPRRFKFAVTYPRVAWLPAAALLIEGILWKPLLTRLSYFAVVPLLLTCIASLFLTAVGATLVATARARNEGSSEVLRATLIAAIPALLFLALMFYGFVNTILGSRGA
Ga0209382_102405243	3300027909	Populus Rhizosphere	MITLGLIGCLVAVGLVLALLAFPRRYSFAARYRRVAWLPVAALLIEGVLWQPVLTKLSYFAVVPLLLTSVASLVLTAVGAALVVMARERNDDAAGLLGATAIAAIPGMLLLALMFYGFINAVI
Ga0268265_104713692	3300028380	Switchgrass Rhizosphere	MITVGLMGCLVAASLVLTLMAFPRRVSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYAAVIPLLLTCIASLFLTAVGATLVVTARERNEGSAAALRATLVAAIPGMLLLALMLYGFVNAML
Ga0247825_100506312	3300028812	Soil	MITFGLMGCLVAASLVLILMAFPRRVSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYAAVIPLLLTCIASLFLTAVGATLVVTARERNEGSAAALRATLVAAIPGMLLLALMLYGFVNAML
Ga0247827_108155271	3300028889	Soil	MITVGLMGCLVAASLVLILMAFPRRVSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYAAVIPLLLTCIASLFLTAVGATLVVTARERNEGSAAALRATLVAAIPGMLLLALMLYGFVNAML
Ga0310888_100100264	3300031538	Soil	MITVGLVGCLVAASLVLTLMVFPRRFSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCIASLFLAAVGATLVVTARERNEGSTAVLRATLIAAIPGMLLLALMLYGFVNAML
Ga0310888_104160192	3300031538	Soil	AASVLALIALPRASSFAQRYRRVAWLPVAALLIEGILWKPFLTRLSYFAVVPLLLTCVASLFLAAIGATLVATSHGRKEGSAEILRATLVAAIPGMLLLVLMVYGFVNAILEK
Ga0310888_107311301	3300031538	Soil	MITLGVLGCTIAAVLVLTLLAFSKRFNLAAAYRRVAWLPVAALLIEAALWKPLLASLSYFGAIFPLLTGIASLFLATVGATLVATARARNEDTTEMLRATLIAAIPGMILLALIFYGLVNAWLGSRDA
Ga0310887_101180233	3300031547	Soil	LAPFSACAYRPGKQQMITLGLVGCLVAASVLALIALPRASSFAQRYRRVAWLPVAALLIEGILWKPFLTRLSYFAVVPLLLTCVASLFLAAIGATLVATSHGRKEGSAEILRATLVAAIPGMLLLVLMVYGFVNAILEK
Ga0310887_104863021	3300031547	Soil	LVAASLVLTLMAFPRRFSFAARYRRVAWLPVAALLIEGLLWKPVLTKLSYFAVIPLLLTCIASLFLTAVGATLVVTARERNEGSTAALRATLIAAIPGMLLLALMLYGFVNAML
Ga0310813_101105192	3300031716	Soil	MIALGLVGCLVAVGLVLTLLAFPRRFTVAARYRRVAWLPATALLIEGALWQPVLSKLSYFAVIPLLLTSAASLVLAAVGAILVVMARERNDDPVALLGATAIAAIPGLLLAALMFYGYISAVI
Ga0310904_100009262	3300031854	Soil	MITVGLVGCLVAASLVLTLMVFPRRFSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCIASLFLTAVGATLVVTARERNEGSTAALRATLIAAIPGMLFLALMLYGFVNAMP
Ga0310904_111045442	3300031854	Soil	LTLMAFPRRVSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYAAVIPLLLTCIASLFLTAVGATLVVTARERNEGSAAALRATLVAAIPGMLLLALMLYGFVNAML
Ga0310893_100815203	3300031892	Soil	MITAGLVGCLVAASLVLTLMAFPRRFSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCIASLFLTAVGATLVVTARERNEGSTAALRATLIAAIPGMLLLALMLYGFVNAML
Ga0310900_101048624	3300031908	Soil	MITVGLVGCLVAASLVLTLMVFPRRFSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCIASLFLAAVGATLVVTARERNEGSTAVLRATLIAAIPGMLFLALMLYGFVNAML
Ga0310891_100477831	3300031913	Soil	MITVGLVGCLVAASLVLTLMVFPRRFSFAARYRRVAWLPVAALLIEGVLWRPVLTKLSYFAVIPLLLTCIASLFLTAVGATLVATARERNESSTATLRATLIAAIPGMLLLALMLYGFVNAML
Ga0310901_104611692	3300031940	Soil	MITLGVLGYTIAAVLVLTLLAFSKRFNLAAAYRRVAWLPVAALLIEAALWKPLLASLSYFGAIFPLLTGIASLFLATVGATLVATARARNEDTTEMLRATLIAAIPGMILLALIFYGLVN
Ga0310885_108685721	3300031943	Soil	STPRFGQQVCSRMITVGLMGCLVAASLVLTLMAFPRRVSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYAAVIPLLLTCIASLFLTAVGATLVVTARERNEGSAAALRATLVAAIPGMLLLALMLYGFVNAML
Ga0310884_101531571	3300031944	Soil	MITLGLLGCLVAASVLALIALPRASSFAQRYRRVAWLPVAALLIEGILWKPFLTRLSYFAVVPLLVTCVASFLLAAIGATLVATSRGRKEGSTEILRATLVAAIPGMLLLALMFYGFVNAILEK
Ga0310890_108260271	3300032075	Soil	PGKQQMITPGLVGCLVAASVLALIALPRASSFAQRYRRVAWLPVAALLIEGILWKPFLTRLSYFAVVPLLLTCVASLFLAAIGATLVATSHGRKEGSAEILRATLVAAIPGMLLLVLMVYGFVNAILEK
Ga0310890_118681691	3300032075	Soil	GDIAKVSGQHVCSRMITVGLVGCLVAASLVLTLMVFPRRFSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCIASLFLAAVGATLVVTARERNEGSTAVLRATLIAAIPGMLFLALMLYGFVNAML
Ga0310895_101283571	3300032122	Soil	MITVGLVGCLVAASLVLTLMVFPRRFSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYAAVIPLLLTCIASLFLTAVGATLVVTARERNEGSAAALRATLVAAIPGMLLLALMLYGFVNAML
Ga0307471_1038774831	3300032180	Hardwood Forest Soil	MITVGLVGCLVAASLVVTLMAFPRRFSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYAAVIPLLLTCIASLFLTAVGATLLVTARERNEGSTAVLRATLIAAIPGMLLLALMLYGFVNAML
Ga0310896_100886882	3300032211	Soil	MITVGLVGCLVAASLVLTLMVFPRRFSFAARYRRVAWLPVAALLIEGVLWKPVLTKLSYFAVIPLLLTCIASLFLAAVGATLVVTARERNEGSTAALRATLIAAIPGMLLLALMLYGFVNAML
Ga0364925_0100100_603_974	3300034147	Sediment	MITLGLVGCLVAAGLVLTLLAFPRRFGFAERYRRVAWLPVAALVIEGVLWKPLLTNLSYFAVIPPLVTCIASLLLAAVGATLVVTARERNEDVTSVVRATLIAAIPGVLLLGLLVYGLVGAVV
Ga0364927_0112429_265_636	3300034148	Sediment	MITLGLVGCLVAAGLVLTLLAFPRRFGFAERYRRVAWLPVAALVIEGVLWKPLLTNLSYFAVIPPLVTCIASLLLAAVGATLVVTARERNEDVTSVVRATLIAAIPGVLLLGLLVYELVGAVV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F084864

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences