Basic Information | |
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Family ID | F084852 |
Family Type | Metagenome |
Number of Sequences | 112 |
Average Sequence Length | 58 residues |
Representative Sequence | MRDLKRFEEDIQNILDKFQFEGETRRKIFSQLMEYASEQDKFNAEQQAGNPQKGNQND |
Number of Associated Samples | 92 |
Number of Associated Scaffolds | 112 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 75.89 % |
% of genes near scaffold ends (potentially truncated) | 26.79 % |
% of genes from short scaffolds (< 2000 bps) | 72.32 % |
Associated GOLD sequencing projects | 83 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.59 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (91.964 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater (32.143 % of family members) |
Environment Ontology (ENVO) | Unclassified (91.071 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (90.179 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 48.84% β-sheet: 0.00% Coil/Unstructured: 51.16% | Feature Viewer |
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Powered by Feature Viewer |
Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.59 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 112 Family Scaffolds |
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PF10073 | DUF2312 | 8.93 |
PF04308 | RNaseH_like | 5.36 |
PF00565 | SNase | 3.57 |
PF00462 | Glutaredoxin | 2.68 |
PF01464 | SLT | 2.68 |
PF05708 | Peptidase_C92 | 1.79 |
PF10504 | DUF2452 | 0.89 |
PF13638 | PIN_4 | 0.89 |
PF08298 | AAA_PrkA | 0.89 |
PF00574 | CLP_protease | 0.89 |
COG ID | Name | Functional Category | % Frequency in 112 Family Scaffolds |
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COG0616 | Periplasmic serine protease, ClpP class | Posttranslational modification, protein turnover, chaperones [O] | 1.79 |
COG0740 | ATP-dependent protease ClpP, protease subunit | Posttranslational modification, protein turnover, chaperones [O] | 1.79 |
COG1030 | Membrane-bound serine protease NfeD, ClpP class | Posttranslational modification, protein turnover, chaperones [O] | 0.89 |
COG2766 | Predicted Ser/Thr protein kinase | Signal transduction mechanisms [T] | 0.89 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 92.86 % |
Unclassified | root | N/A | 7.14 % |
Visualization |
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Powered by ApexCharts |
Scaffold | Taxonomy | Length | IMG/M Link |
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3300000101|DelMOSum2010_c10004652 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 9816 | Open in IMG/M |
3300001346|JGI20151J14362_10068154 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 1404 | Open in IMG/M |
3300001346|JGI20151J14362_10161648 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 656 | Open in IMG/M |
3300001450|JGI24006J15134_10005307 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 6730 | Open in IMG/M |
3300001450|JGI24006J15134_10007266 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 5621 | Open in IMG/M |
3300001460|JGI24003J15210_10002755 | All Organisms → cellular organisms → Bacteria | 7689 | Open in IMG/M |
3300001460|JGI24003J15210_10027089 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 2120 | Open in IMG/M |
3300001589|JGI24005J15628_10001734 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 11518 | Open in IMG/M |
3300001589|JGI24005J15628_10008556 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 4820 | Open in IMG/M |
3300004097|Ga0055584_101063336 | All Organisms → cellular organisms → Bacteria | 846 | Open in IMG/M |
3300005514|Ga0066866_10171670 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 769 | Open in IMG/M |
3300005521|Ga0066862_10035992 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 1784 | Open in IMG/M |
3300006735|Ga0098038_1008966 | All Organisms → cellular organisms → Bacteria | 3964 | Open in IMG/M |
3300006735|Ga0098038_1028788 | Not Available | 2080 | Open in IMG/M |
3300006737|Ga0098037_1014744 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 2975 | Open in IMG/M |
3300006751|Ga0098040_1049404 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 1310 | Open in IMG/M |
3300006752|Ga0098048_1191097 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 605 | Open in IMG/M |
3300006752|Ga0098048_1235264 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 537 | Open in IMG/M |
3300006916|Ga0070750_10123188 | Not Available | 1188 | Open in IMG/M |
3300006919|Ga0070746_10062782 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 1912 | Open in IMG/M |
3300006921|Ga0098060_1124179 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 723 | Open in IMG/M |
3300006922|Ga0098045_1117357 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 622 | Open in IMG/M |
3300006924|Ga0098051_1129094 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 672 | Open in IMG/M |
3300006928|Ga0098041_1155238 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 736 | Open in IMG/M |
3300007276|Ga0070747_1124673 | All Organisms → cellular organisms → Bacteria | 937 | Open in IMG/M |
3300007276|Ga0070747_1133041 | Not Available | 901 | Open in IMG/M |
3300009071|Ga0115566_10001584 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 19347 | Open in IMG/M |
3300009077|Ga0115552_1141187 | All Organisms → cellular organisms → Bacteria | 1016 | Open in IMG/M |
3300009435|Ga0115546_1032739 | All Organisms → cellular organisms → Bacteria | 2092 | Open in IMG/M |
3300009435|Ga0115546_1034488 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 2029 | Open in IMG/M |
3300009481|Ga0114932_10205689 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 1197 | Open in IMG/M |
3300009507|Ga0115572_10317894 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 880 | Open in IMG/M |
3300009507|Ga0115572_10591620 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 611 | Open in IMG/M |
3300009593|Ga0115011_10747417 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 805 | Open in IMG/M |
3300009786|Ga0114999_10916962 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 639 | Open in IMG/M |
3300010392|Ga0118731_104108542 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 642 | Open in IMG/M |
3300010430|Ga0118733_105783023 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 649 | Open in IMG/M |
3300010883|Ga0133547_10138430 | All Organisms → cellular organisms → Bacteria | 5302 | Open in IMG/M |
3300012953|Ga0163179_10033669 | Not Available | 3461 | Open in IMG/M |
3300012953|Ga0163179_10655931 | All Organisms → cellular organisms → Bacteria | 886 | Open in IMG/M |
3300014959|Ga0134299_1049083 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 610 | Open in IMG/M |
3300017697|Ga0180120_10102220 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 1246 | Open in IMG/M |
3300017709|Ga0181387_1031678 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 1037 | Open in IMG/M |
3300017710|Ga0181403_1024233 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 1285 | Open in IMG/M |
3300017714|Ga0181412_1101951 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 674 | Open in IMG/M |
3300017720|Ga0181383_1001749 | All Organisms → cellular organisms → Bacteria | 6231 | Open in IMG/M |
3300017720|Ga0181383_1051757 | Not Available | 1103 | Open in IMG/M |
3300017720|Ga0181383_1060124 | All Organisms → cellular organisms → Bacteria | 1020 | Open in IMG/M |
3300017727|Ga0181401_1071200 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 918 | Open in IMG/M |
3300017728|Ga0181419_1137325 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 590 | Open in IMG/M |
3300017730|Ga0181417_1115253 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 651 | Open in IMG/M |
3300017733|Ga0181426_1061540 | All Organisms → cellular organisms → Bacteria | 745 | Open in IMG/M |
3300017735|Ga0181431_1023565 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 1428 | Open in IMG/M |
3300017737|Ga0187218_1144412 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 563 | Open in IMG/M |
3300017742|Ga0181399_1156465 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 546 | Open in IMG/M |
3300017743|Ga0181402_1025303 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 1675 | Open in IMG/M |
3300017744|Ga0181397_1023014 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 1821 | Open in IMG/M |
3300017746|Ga0181389_1127901 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 686 | Open in IMG/M |
3300017746|Ga0181389_1208201 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 504 | Open in IMG/M |
3300017749|Ga0181392_1123586 | All Organisms → cellular organisms → Bacteria | 765 | Open in IMG/M |
3300017750|Ga0181405_1006193 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 3532 | Open in IMG/M |
3300017750|Ga0181405_1077387 | All Organisms → cellular organisms → Bacteria | 853 | Open in IMG/M |
3300017750|Ga0181405_1142238 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 595 | Open in IMG/M |
3300017753|Ga0181407_1009873 | All Organisms → cellular organisms → Bacteria | 2735 | Open in IMG/M |
3300017755|Ga0181411_1075999 | Not Available | 1011 | Open in IMG/M |
3300017755|Ga0181411_1129990 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 732 | Open in IMG/M |
3300017756|Ga0181382_1150843 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 606 | Open in IMG/M |
3300017757|Ga0181420_1096238 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 914 | Open in IMG/M |
3300017759|Ga0181414_1164113 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 579 | Open in IMG/M |
3300017764|Ga0181385_1048751 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 1320 | Open in IMG/M |
3300017764|Ga0181385_1162499 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 676 | Open in IMG/M |
3300017765|Ga0181413_1073136 | All Organisms → cellular organisms → Bacteria | 1051 | Open in IMG/M |
3300017765|Ga0181413_1086758 | All Organisms → cellular organisms → Bacteria | 955 | Open in IMG/M |
3300017767|Ga0181406_1264704 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 503 | Open in IMG/M |
3300017769|Ga0187221_1205273 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 567 | Open in IMG/M |
3300017773|Ga0181386_1221936 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 563 | Open in IMG/M |
3300017776|Ga0181394_1105069 | All Organisms → cellular organisms → Bacteria | 900 | Open in IMG/M |
3300017781|Ga0181423_1393464 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 501 | Open in IMG/M |
3300020165|Ga0206125_10056948 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 1853 | Open in IMG/M |
3300020374|Ga0211477_10200097 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 698 | Open in IMG/M |
3300020438|Ga0211576_10176521 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 1146 | Open in IMG/M |
3300020474|Ga0211547_10103585 | All Organisms → Viruses → Predicted Viral | 1491 | Open in IMG/M |
3300020595|Ga0206126_10019738 | All Organisms → cellular organisms → Bacteria | 4539 | Open in IMG/M |
3300021365|Ga0206123_10007198 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 7977 | Open in IMG/M |
(restricted) 3300024255|Ga0233438_10181027 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 880 | Open in IMG/M |
3300025085|Ga0208792_1100175 | Not Available | 504 | Open in IMG/M |
3300025086|Ga0208157_1050713 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 1116 | Open in IMG/M |
3300025096|Ga0208011_1104101 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 600 | Open in IMG/M |
3300025120|Ga0209535_1000545 | All Organisms → cellular organisms → Bacteria | 27010 | Open in IMG/M |
3300025120|Ga0209535_1003962 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 9341 | Open in IMG/M |
3300025128|Ga0208919_1078759 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 1083 | Open in IMG/M |
3300025137|Ga0209336_10133786 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 668 | Open in IMG/M |
3300025138|Ga0209634_1011705 | All Organisms → cellular organisms → Bacteria | 5231 | Open in IMG/M |
3300025141|Ga0209756_1033750 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 2706 | Open in IMG/M |
3300025168|Ga0209337_1000198 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 47928 | Open in IMG/M |
3300025645|Ga0208643_1161129 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 559 | Open in IMG/M |
3300025652|Ga0208134_1010229 | All Organisms → cellular organisms → Bacteria | 3958 | Open in IMG/M |
3300025759|Ga0208899_1167340 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 733 | Open in IMG/M |
3300025870|Ga0209666_1292919 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 647 | Open in IMG/M |
3300027906|Ga0209404_10014026 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 4384 | Open in IMG/M |
3300028196|Ga0257114_1119518 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 1049 | Open in IMG/M |
3300028197|Ga0257110_1310586 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 565 | Open in IMG/M |
3300029448|Ga0183755_1004925 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 6293 | Open in IMG/M |
3300029448|Ga0183755_1084329 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 669 | Open in IMG/M |
3300029787|Ga0183757_1013737 | All Organisms → cellular organisms → Bacteria | 2164 | Open in IMG/M |
3300031757|Ga0315328_10253140 | All Organisms → cellular organisms → Bacteria | 1031 | Open in IMG/M |
3300031766|Ga0315322_10629966 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 683 | Open in IMG/M |
3300031774|Ga0315331_10847755 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 634 | Open in IMG/M |
3300031775|Ga0315326_10362146 | All Organisms → cellular organisms → Bacteria | 945 | Open in IMG/M |
3300031851|Ga0315320_10033017 | Not Available | 4090 | Open in IMG/M |
3300032047|Ga0315330_10705493 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 587 | Open in IMG/M |
3300032088|Ga0315321_10082549 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64 | 2204 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Seawater | Environmental → Aquatic → Marine → Strait → Unclassified → Seawater | 32.14% |
Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 28.57% |
Aqueous | Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous | 6.25% |
Seawater | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater | 6.25% |
Marine | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine | 5.36% |
Pelagic Marine | Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine | 5.36% |
Seawater | Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater | 2.68% |
Pelagic Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine | 2.68% |
Seawater | Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater | 1.79% |
Marine | Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine | 0.89% |
Marine | Environmental → Aquatic → Marine → Inlet → Unclassified → Marine | 0.89% |
Seawater | Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater | 0.89% |
Marine | Environmental → Aquatic → Marine → Coastal → Sediment → Marine | 0.89% |
Marine Sediment | Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment | 0.89% |
Freshwater To Marine Saline Gradient | Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient | 0.89% |
Marine | Environmental → Aquatic → Marine → Coastal → Unclassified → Marine | 0.89% |
Marine | Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine | 0.89% |
Marine | Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine | 0.89% |
Deep Subsurface | Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface | 0.89% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
3300000101 | Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010 | Environmental | Open in IMG/M |
3300001346 | Pelagic Microbial community sample from North Sea - COGITO 998_met_01 | Environmental | Open in IMG/M |
3300001450 | Marine viral communities from the Pacific Ocean - LP-53 | Environmental | Open in IMG/M |
3300001460 | Marine viral communities from the Pacific Ocean - LP-28 | Environmental | Open in IMG/M |
3300001589 | Marine viral communities from the Pacific Ocean - LP-40 | Environmental | Open in IMG/M |
3300004097 | Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG | Environmental | Open in IMG/M |
3300005514 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263 | Environmental | Open in IMG/M |
3300005521 | Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV255 | Environmental | Open in IMG/M |
3300006735 | Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG | Environmental | Open in IMG/M |
3300006737 | Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG | Environmental | Open in IMG/M |
3300006751 | Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG | Environmental | Open in IMG/M |
3300006752 | Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG | Environmental | Open in IMG/M |
3300006916 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 | Environmental | Open in IMG/M |
3300006919 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 | Environmental | Open in IMG/M |
3300006921 | Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG | Environmental | Open in IMG/M |
3300006922 | Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG | Environmental | Open in IMG/M |
3300006924 | Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG | Environmental | Open in IMG/M |
3300006928 | Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG | Environmental | Open in IMG/M |
3300007276 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 | Environmental | Open in IMG/M |
3300009071 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405 | Environmental | Open in IMG/M |
3300009077 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328 | Environmental | Open in IMG/M |
3300009435 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 | Environmental | Open in IMG/M |
3300009481 | Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG | Environmental | Open in IMG/M |
3300009507 | Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 | Environmental | Open in IMG/M |
3300009593 | Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome | Environmental | Open in IMG/M |
3300009786 | Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126 | Environmental | Open in IMG/M |
3300010392 | Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385 | Environmental | Open in IMG/M |
3300010430 | Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samples | Environmental | Open in IMG/M |
3300010883 | western Arctic Ocean co-assembly | Environmental | Open in IMG/M |
3300012953 | Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome | Environmental | Open in IMG/M |
3300014959 | Marine microbial communities to study oil droplet degradation from Trondheimsfjord, Norway - 0148 : 4 days incubation | Environmental | Open in IMG/M |
3300017697 | Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2) | Environmental | Open in IMG/M |
3300017709 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27 | Environmental | Open in IMG/M |
3300017710 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28 | Environmental | Open in IMG/M |
3300017714 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15 | Environmental | Open in IMG/M |
3300017720 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 | Environmental | Open in IMG/M |
3300017727 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20 | Environmental | Open in IMG/M |
3300017728 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24 | Environmental | Open in IMG/M |
3300017730 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13 | Environmental | Open in IMG/M |
3300017733 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 49 SPOT_SRF_2013-12-23 | Environmental | Open in IMG/M |
3300017735 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21 | Environmental | Open in IMG/M |
3300017737 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11 (version 2) | Environmental | Open in IMG/M |
3300017742 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21 | Environmental | Open in IMG/M |
3300017743 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17 | Environmental | Open in IMG/M |
3300017744 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23 | Environmental | Open in IMG/M |
3300017746 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29 | Environmental | Open in IMG/M |
3300017749 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 | Environmental | Open in IMG/M |
3300017750 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29 | Environmental | Open in IMG/M |
3300017753 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26 | Environmental | Open in IMG/M |
3300017755 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09 | Environmental | Open in IMG/M |
3300017756 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 | Environmental | Open in IMG/M |
3300017757 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22 | Environmental | Open in IMG/M |
3300017759 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28 | Environmental | Open in IMG/M |
3300017764 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11 | Environmental | Open in IMG/M |
3300017765 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28 | Environmental | Open in IMG/M |
3300017767 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20 | Environmental | Open in IMG/M |
3300017769 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2) | Environmental | Open in IMG/M |
3300017773 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24 | Environmental | Open in IMG/M |
3300017776 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23 | Environmental | Open in IMG/M |
3300017781 | Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14 | Environmental | Open in IMG/M |
3300020165 | Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1 | Environmental | Open in IMG/M |
3300020374 | Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291766-ERR318618) | Environmental | Open in IMG/M |
3300020438 | Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942) | Environmental | Open in IMG/M |
3300020474 | Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976) | Environmental | Open in IMG/M |
3300020595 | Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160412_1 | Environmental | Open in IMG/M |
3300021365 | Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1 | Environmental | Open in IMG/M |
3300024255 (restricted) | Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG | Environmental | Open in IMG/M |
3300025085 | Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025086 | Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025096 | Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025120 | Marine viral communities from the Pacific Ocean - LP-28 (SPAdes) | Environmental | Open in IMG/M |
3300025128 | Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025137 | Marine viral communities from the Pacific Ocean - LP-32 (SPAdes) | Environmental | Open in IMG/M |
3300025138 | Marine viral communities from the Pacific Ocean - LP-40 (SPAdes) | Environmental | Open in IMG/M |
3300025141 | Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes) | Environmental | Open in IMG/M |
3300025168 | Marine viral communities from the Pacific Ocean - LP-53 (SPAdes) | Environmental | Open in IMG/M |
3300025645 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes) | Environmental | Open in IMG/M |
3300025652 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes) | Environmental | Open in IMG/M |
3300025759 | Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes) | Environmental | Open in IMG/M |
3300025870 | Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_125m_DNA (SPAdes) | Environmental | Open in IMG/M |
3300027906 | Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes) | Environmental | Open in IMG/M |
3300028196 | Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10m | Environmental | Open in IMG/M |
3300028197 | Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10m | Environmental | Open in IMG/M |
3300029448 | Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082 | Environmental | Open in IMG/M |
3300029787 | Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172 | Environmental | Open in IMG/M |
3300031757 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315 | Environmental | Open in IMG/M |
3300031766 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 21515 | Environmental | Open in IMG/M |
3300031774 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915 | Environmental | Open in IMG/M |
3300031775 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315 | Environmental | Open in IMG/M |
3300031851 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515 | Environmental | Open in IMG/M |
3300032047 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 34915 | Environmental | Open in IMG/M |
3300032088 | Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 21515 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOSum2010_1000465220 | 3300000101 | Marine | MRDLKRFEEDIQKILDKFQFEGETRRKIFSQLMEYASDQDQFNIEIEAGNPQKGSQND* |
JGI20151J14362_100681545 | 3300001346 | Pelagic Marine | MRDLKKFEEDIQNILDKFQFVGETRRKIFSQLMEYASEQDKFNAEQQAGNPQKGNQND* |
JGI20151J14362_101616483 | 3300001346 | Pelagic Marine | RFEEDIQNILDKFQFEGETRRKIFSQLMEYASEQDKFNAEQQAGNPKKGNQNE* |
JGI24006J15134_100053073 | 3300001450 | Marine | MKDLKRFEKDVQGILDKFKFEGKLRRKIFSQLMEYASEQDRFAAEEQQTQKK* |
JGI24006J15134_1000726616 | 3300001450 | Marine | MRDLKRFEEDIQKILDKFQFEGETRRKIFSQLMEYASEQDKFNIELEAGNPQKGNQNE* |
JGI24003J15210_1000275513 | 3300001460 | Marine | MRDLKRFEEDIQNILDKFQFEGAIRRKIFSQLMEYASEQDKFNAEQQAGNPKKGNQNDNDR* |
JGI24003J15210_100270891 | 3300001460 | Marine | MRDLKRFEEDIQNILDKFQFEGETRRKIFSQLMEYASEQDKFNAEQQAGNPQKGNQNE* |
JGI24005J15628_1000173414 | 3300001589 | Marine | MRDLKRFEEDIQKILDKFQFEGETRRKIFSQLMEYASEQDQFNIELEAGNPQKGNQNE* |
JGI24005J15628_1000855614 | 3300001589 | Marine | MRDLKRFEEDIQKILDKFQFEGETRRKIFSQLMEYASEQDQFNIELEAGNPQK |
Ga0055584_1010633363 | 3300004097 | Pelagic Marine | MRDLKKFEEDIQKILDKFQFEGETRRKIFSQLMEYASEEDQFEAEQQAGNPQKGNQND* |
Ga0066866_101716701 | 3300005514 | Marine | MRDLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASEQDLFEAEQQAGNPKKGSHNDQDQ* |
Ga0066862_100359924 | 3300005521 | Marine | MRDLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASEQDQFNAEQQAGNPQKGSQND* |
Ga0098038_100896611 | 3300006735 | Marine | MRDLKRFEEDIQNILDKFHFVGETRRKIFSQLMEYASDQDKFNAEQQAGNPQKGSQND* |
Ga0098038_10287885 | 3300006735 | Marine | MRDLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASEQDKFNAEQQAGNPKKGNQK* |
Ga0098037_10147447 | 3300006737 | Marine | MRDLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASDQDKFNAEQQAGNPQKGSQND* |
Ga0098040_10494044 | 3300006751 | Marine | MKDLKRFEEDIQNILDKFEFVGETRRKIFSQLMEYASEQDQFNAEQQAGNPQKGNQNE* |
Ga0098048_11910973 | 3300006752 | Marine | MRDLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASEQDKFNAEHQAGNPKKGNQNE* |
Ga0098048_12352641 | 3300006752 | Marine | MKDLKRFEKDVQDILDKFKFEGKLRRKIFSQLMEYASEQDRFAPEEQQTQKK* |
Ga0070750_101231884 | 3300006916 | Aqueous | MRDLKRFEKDVQGILDRFQFKGETRRKIFSQLMEYASEQDKFNAEQQAGNPKKGNQNDNDR* |
Ga0070746_100627824 | 3300006919 | Aqueous | MRDLKRFEEDIQKILDKFQFEGETRRKIFSQLMEYASEQDKFNAEQQAGNPKKGNQNDNDR* |
Ga0098060_11241791 | 3300006921 | Marine | QSIRKGSHRVGSSLRGSSRGGIRKMRDLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASEQDQFNAEQQAGNPQKGSQND* |
Ga0098045_11173572 | 3300006922 | Marine | MKDLKRFEEDIQEILDKFQFSGELRRKIFSQLMEYASELDQFEADQQAGNPKKGNQK* |
Ga0098051_11290941 | 3300006924 | Marine | MRDLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASEQQRYNESQQASNPKKGNQK* |
Ga0098041_11552383 | 3300006928 | Marine | RGQMKDLAKFEKDIQKILDKFQFEGETRRKIFSQLMEYASEEEQFKFELEYKAGNPKKGNQK* |
Ga0070747_11246731 | 3300007276 | Aqueous | LKRFEEDIQNILDKFQFAGETRRKIFSQLMEYASEQDQFNAEQQAGNPQKGNQND* |
Ga0070747_11330411 | 3300007276 | Aqueous | MRDLKRFEKDVQGILDRFQFKGETRSKIFSQLMEYASEEERFKFELDYKAGNPKKGNQK* |
Ga0115566_1000158423 | 3300009071 | Pelagic Marine | MRDLKRFEEDIQNILDKFQFEGETRRKIFSQLMEYASEQDKFNAEQQAGNPKKGNQNE* |
Ga0115552_11411871 | 3300009077 | Pelagic Marine | MRNLKRFEEDIQNILDKFQFAGETRRKIFSQLMEYASDQDQFNIEIEAGNPQKGSQND* |
Ga0115546_10327394 | 3300009435 | Pelagic Marine | MRDLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASEQDKFNAEQQAGNPKKGNQNE* |
Ga0115546_10344882 | 3300009435 | Pelagic Marine | MRDLKKFEKDIQNILDKFQFVGETRRKIFSQLMEYASEQDKFNAEQQAGNPQKGNQND* |
Ga0114932_102056895 | 3300009481 | Deep Subsurface | MRDLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASDQDKFNAEQQAGNPQKGNQND* |
Ga0115572_103178944 | 3300009507 | Pelagic Marine | MRDLKTFEEDIQNILDKFQFEGETRRKIFSQLMEYASEQDKFNAEQQAGNPKKGNQNE* |
Ga0115572_105916202 | 3300009507 | Pelagic Marine | MRDLKKFEEDIQNILDKFQFVGETRRKIFSQLMEYASEQDQFEAEQQAGNPQKGNQND* |
Ga0115011_107474174 | 3300009593 | Marine | MRDLKRFEKDVQGILDRFQFKGETRRKIFSQLMEYASEQDQFEAEQQAGNPQKGSQND* |
Ga0114999_109169621 | 3300009786 | Marine | KEIKEFNREKFGEDIQKILDLFQFEGGLRRQIFSQLMEYASESAQLNAEQQAGNPQKGSQNDQR* |
Ga0118731_1041085422 | 3300010392 | Marine | MRDLKRFEEDLQNILDKFQFAGETRRKIFSQLMEYASEEERFKFELDYKAGNPKKGNQK* |
Ga0118733_1057830232 | 3300010430 | Marine Sediment | MRDLKRFEEDLQNILDKFQFAGETRRKIFSQLMEYASEQDQFNAEQQAGNPQKGNQNE* |
Ga0133547_1013843013 | 3300010883 | Marine | MRDLKRFEEDIQKILDKFQFEGETRRKIFSQLMEYASEQDQFNIELEAGNPQKGSQND* |
Ga0163179_100336692 | 3300012953 | Seawater | MRDLKRFEEDIQNILDKFQFSGETRRKIFSQLMEYASEEEQFKFELDYKAGNPKKGNQK* |
Ga0163179_106559311 | 3300012953 | Seawater | LKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASDQDKFNAEQQAGNPQKGSQND* |
Ga0134299_10490832 | 3300014959 | Marine | MRDLKKFEEDIQNILDKFQFAGETRRQIFSQIMEYASEQDRFEAEQQAGNPQKGSQND* |
Ga0180120_101022203 | 3300017697 | Freshwater To Marine Saline Gradient | MRDLKKFEKDVQKILDKFQFEGETRRKIFSQLMEYASEQDQFEAEQQAGNPQKGNQND |
Ga0181387_10316782 | 3300017709 | Seawater | MRNLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASEQDKFNAEQQAGNPQKGSQND |
Ga0181403_10242331 | 3300017710 | Seawater | MRDLKRFEEDIQKILDKFQFEGETRRKIFSQLMEYAGEQDQFNIELEAGNPQK |
Ga0181412_11019512 | 3300017714 | Seawater | MRDLKRFEEDIQKILDKFQFEGETRRKIFSQLMEYASDQDKFNAEQQAGNPQKGSQND |
Ga0181383_100174911 | 3300017720 | Seawater | MRDLKRFEEDLQDILDKFQFAGETRRKIFSQLMEYASEEEQFKFELEYKAGNPKKGNQK |
Ga0181383_10517573 | 3300017720 | Seawater | MRDLKKFEEDVQNILDKFQFEGETRRKIFSQLMEYASEEERFKFELDYKAGNPKKGNQK |
Ga0181383_10601242 | 3300017720 | Seawater | MRDLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASDQDKFNAEQQAGNPQEGSQND |
Ga0181401_10712003 | 3300017727 | Seawater | MRDLKRFEEDIQKILDKFQFEGETRRKIFSQLMEYASEQDQFEAEQQAGNPQKGSQND |
Ga0181419_11373251 | 3300017728 | Seawater | HXGLWKMRNLKRFEEDIQNILDKFQFAGKTRRKIFSQLMEYASEQDKFNAEQQAGNPQKGSQND |
Ga0181417_11152533 | 3300017730 | Seawater | WKMRDLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASDQDKFNAEQQAGNPQKGSQND |
Ga0181426_10615403 | 3300017733 | Seawater | MRDLKRFEEDIQKILDKFQFEGETRRKIFSQLMEYASEQDKFNAEQQAGNPQKGNQND |
Ga0181431_10235652 | 3300017735 | Seawater | MRDLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASEQDKFNAEQQAGNPQKGSQND |
Ga0187218_11444121 | 3300017737 | Seawater | KRFEEDLQDILDKFQFAGETRRKIFSQLMEYASEDEQFKFELEYKAGNPKKGNQK |
Ga0181399_11564651 | 3300017742 | Seawater | GLRKMKDLKKFEEDIQKILDKFQFVGETRRKIFSQLMEYACDQDKFNAEQQAGNPQKGSQNDQR |
Ga0181402_10253035 | 3300017743 | Seawater | MRDLKRFEEDIQNILDKFQFEGETRRKIFSQLMEYASDQDKFNAEQQAGNPQKGSQND |
Ga0181397_10230141 | 3300017744 | Seawater | MRDLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASEQDQFNIELEAGNPQKGSQND |
Ga0181389_11279012 | 3300017746 | Seawater | MKDLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASEQDQFEAEQQAGNPQKGSQND |
Ga0181389_12082011 | 3300017746 | Seawater | EDIQNILDKFQFEGETRRKIFSQLMEYASEQDQFNIELEAGNPQKGSQND |
Ga0181392_11235861 | 3300017749 | Seawater | EDIQNILDKFQFAGETRRKIFSQLMEYASEQDKFNAEQQAGNPQKGNQND |
Ga0181405_10061933 | 3300017750 | Seawater | MRDLKRFEEDLQNILDKFQFEGETRRKIFSQLMEYASEEERFKFELDYKAGNPKKGNQK |
Ga0181405_10773873 | 3300017750 | Seawater | FEEDIQNILDKFQFVGETRRKIFSQLMEYASDQDKFNAEQQAGNPQKGSQND |
Ga0181405_11422382 | 3300017750 | Seawater | MRDLKKFEEDIQKILDKFQFVGETRRKIFSQLMEYASEQDKFNAEQQAGNPQKGNQND |
Ga0181407_10098731 | 3300017753 | Seawater | QNILDKFQFEGETRRKIFSQLMEYASEQDQFNIELEAGNPQKGSQND |
Ga0181411_10759992 | 3300017755 | Seawater | MRDLKKFEEDIQNILDKFQFAGETRRKIFSQLMEYASEQDQFNAEQQAGNPKKGNQK |
Ga0181411_11299901 | 3300017755 | Seawater | FVGQSIIKGSHLVGPSVRVSSHXGIWKMRDLKRFEEDIQKILDKFQFEDETRRKIFSQLMEYASEQDQFNIELEAGNPQKGNQNE |
Ga0181382_11508431 | 3300017756 | Seawater | MRDLKRFEEDIQNILDKFQFEGETRRKIFSQLMEYASEQDKFNAEQQAGNPQKGSQND |
Ga0181420_10962383 | 3300017757 | Seawater | MRDLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASEQDKFNAEQQAGNPQKGNQNE |
Ga0181414_11641132 | 3300017759 | Seawater | MRDLKRFEEDIQKILDKFQFEGETRRKIFSQLMEYASEQDQFNIELEAGNAKKGSQNDQR |
Ga0181385_10487511 | 3300017764 | Seawater | QNILDKFQFVGETRRKIFSQLMEYASDQDKFNAEQQAGNPQEGSQND |
Ga0181385_11624992 | 3300017764 | Seawater | MRDLKRFEEDIQNILDKFQFEGETRRKIFSQLMEYASEADRYDAEVQAGNPQKGSQNDQR |
Ga0181413_10731362 | 3300017765 | Seawater | MRDLKRFEEDIQKILDKFQFVGETRRKIFSQLMEYASDQDKFNAEQQAGNPQKGSQND |
Ga0181413_10867581 | 3300017765 | Seawater | VRGSSHXGIWKMRDLKRFEEDIQKILDKFQFEDETRRKIFSQLMEYASEQDQFNIELEAGNPQKGSQND |
Ga0181406_12647043 | 3300017767 | Seawater | MRDLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASEQDQFNAEQQAGNPQ |
Ga0187221_12052732 | 3300017769 | Seawater | LWKMRDLKRFEEDIQNILDKFQFEGETRRKIFSQLMEYASEQDKFNAEQQAGNPQKGSQN |
Ga0181386_12219361 | 3300017773 | Seawater | FRGQMKDLKRFEKDIQGILDRFHFVGETRRKIFSQLMEYASEEERFKFELDYKAGNPKKGNQK |
Ga0181394_11050693 | 3300017776 | Seawater | EKDIQGILDRFHFVGETRRKIFSQLTEYAGELKRYEQEQQAGKPQKGSQNDDD |
Ga0181423_13934643 | 3300017781 | Seawater | MRDLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYAGEQDQFNIELEAGNPQKGNQNE |
Ga0206125_100569482 | 3300020165 | Seawater | MRDLKKFEKDIQNILDKFQFVGETRRKIFSQLMEYASEQDKFNAEQQAGNPQKGNQND |
Ga0211477_102000973 | 3300020374 | Marine | RKMRNLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASDQDKFNAEQQAGNPQKGSQND |
Ga0211576_101765214 | 3300020438 | Marine | MRDLKRFEEDIQKILDKFQFEGETRRKIFSQLMEYASEQDKFNAEQQAGNPQKGSQND |
Ga0211547_101035852 | 3300020474 | Marine | MRNLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASDQDKFNAEQQAGNPQKGSQND |
Ga0206126_100197382 | 3300020595 | Seawater | MRDLKTFEEDIQKILDKFQFEGETRRKIFSQLVRAFGEQQAGKTQKGSQNE |
Ga0206123_1000719819 | 3300021365 | Seawater | MRDLKKFEEDIQNILDKFQFVGETRRKIFSQLMEYASEQDKFNAEQQAGNPQKGNQND |
(restricted) Ga0233438_101810272 | 3300024255 | Seawater | MRDLKRFEKDIQNILDKFQFAGETRRKIFSQLMEYASEQDQFNAEQQAGNPQKGNQNE |
Ga0208792_11001752 | 3300025085 | Marine | MKDLKRFEKDVQDILDKFKFEGKLRRKIFSQLMEYASEQDRFAPEEQQTQKK |
Ga0208157_10507132 | 3300025086 | Marine | MRDLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASDQDKFNAEQQAGNPQKGSQND |
Ga0208011_11041012 | 3300025096 | Marine | MKDLKRFEEDIQNILDKFEFVGETRRKIFSQLMEYASEQDQFNAEQQAGNPQKGNQNE |
Ga0209535_100054553 | 3300025120 | Marine | WKMRDLKRFEEDIQNILDKFQFEGETRRKIFSQLMEYASEQDKFNAEQQAGNPQKGNQNE |
Ga0209535_100396213 | 3300025120 | Marine | MRDLKRFEEDIQNILDKFQFEGAIRRKIFSQLMEYASEQDKFNAEQQAGNPKKGNQNDND |
Ga0208919_10787595 | 3300025128 | Marine | MRDLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASEQERYNAEQEAGNPQKGSQND |
Ga0209336_101337863 | 3300025137 | Marine | MRDLKRFEEDIQKILDKFQFEGETRRKIFSQLMEYASEQDKFNAEQQAGNPQKGNQNE |
Ga0209634_101170514 | 3300025138 | Marine | MRDLKRFEEDIQKILDKFQFEDETRRKIFSQLMEYASEQDQFNIELEAGNPQKGSQND |
Ga0209756_10337506 | 3300025141 | Marine | MRDLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASEQDQFNAEQQAGNPQKGSQND |
Ga0209337_100019812 | 3300025168 | Marine | MRDLKRFEEDIQNILDKFQFEGETRRKIFSQLMEYASEQDKFNAEQQAGNPQKGNQNE |
Ga0208643_11611292 | 3300025645 | Aqueous | MKDLKRFEEDLQNILDKFQFAGETRRKIFSQLMEYASDQDQFNIEIEAGNPQKGSQND |
Ga0208134_101022911 | 3300025652 | Aqueous | MRDLKRFEEDIQKILDKFQFEGETRRKIFSQLMEYASDQDQFNIEIEAGNPQKGSQND |
Ga0208899_11673402 | 3300025759 | Aqueous | MRDLKRFEKDVQGILDRFQFKGETRRKIFSQLMEYASEQDKFNAEQQAGNPKKGNQNDND |
Ga0209666_12929192 | 3300025870 | Marine | MRDLKRFEEDIQNILDKFQFEGETRRKIFSQLMEYASEQDKFNAEQQAGNPQKGNQND |
Ga0209404_1001402612 | 3300027906 | Marine | MKDLKRFEKDVQGILDKFKFEGKLRRKIFSQLMEYASEQDRFAAEEQQTQKK |
Ga0257114_11195182 | 3300028196 | Marine | MRDLKRFEEDIQNILDKFQFEGAIRRKIFSQLMEYASEQDKFNAEQQAGNPQKGNQND |
Ga0257110_13105862 | 3300028197 | Marine | MRDLKRFEEDIQKILDKFQFEGETRRKIFSQLMEYASEQDQFNIELEAGNPQKGSQND |
Ga0183755_100492514 | 3300029448 | Marine | MRDLKKFEKDIQNILDKFQFAGETRRQIFSQIMEYASEQERYNAEQEAGNPQKGSQND |
Ga0183755_10843291 | 3300029448 | Marine | IQNILDKFQFVGETRRKIFSQLMEYASEQDKFNAEQQAGNPQKGSQND |
Ga0183757_10137372 | 3300029787 | Marine | MRDLKRFEEDIQNILDKFQFAGETRRKIFSQLMEYASEEEQFKFELEYKAGNPKKGNQK |
Ga0315328_102531403 | 3300031757 | Seawater | MKDLKRFEKDIQGILDRFHFVGETRRKIFSQLMEYASESDRFSAEEEAGNPKKGNQK |
Ga0315322_106299662 | 3300031766 | Seawater | MKDLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYANEQDQFNAEQQAGNPQKGSQND |
Ga0315331_108477553 | 3300031774 | Seawater | QKILDKFQFVGETRRKIFSQLVRAFGEQQAGNAKKGSQNDQR |
Ga0315326_103621461 | 3300031775 | Seawater | RFEEDIQNILDKFQFVGETRRKIFSQLMEYANEQDQFNAEQQAGNPQKGSQND |
Ga0315320_100330172 | 3300031851 | Seawater | MRDLKRFEEDIQNILDKFQFAGETRRKIFSQLMEYASEEERFKFELDYKAGNPKKGNQK |
Ga0315330_107054933 | 3300032047 | Seawater | MRDLKRFEEDIQNILDKFQFVGETRRKIFSQLMEYASDQDKFNAEQLAGNPQKGSQND |
Ga0315321_100825491 | 3300032088 | Seawater | MKDLKRFEKDVQGILDKFKFEGKLRRKIFSQLMEYASEQDRFAAEEQQTQ |
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