Metagenome / Metatranscriptome Family F084799

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084799
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	49 residues
Representative Sequence	MPRYYFHLTDGKQVLNNHKGIDLSGNAAARDDALALARDLKHGAVMPGW
Number of Associated Samples	100
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.32 %
% of genes near scaffold ends (potentially truncated)	95.54 %
% of genes from short scaffolds (< 2000 bps)	88.39 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.679 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.393 % of family members)
Environment Ontology (ENVO)	Unclassified (23.214 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.750 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.48% β-sheet: 2.60% Coil/Unstructured: 77.92%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01293	PEPCK_ATP	5.36
PF04140	ICMT	3.57
PF13649	Methyltransf_25	3.57
PF00582	Usp	1.79
PF11158	DUF2938	1.79
PF05362	Lon_C	1.79
PF00011	HSP20	1.79
PF13467	RHH_4	1.79
PF02190	LON_substr_bdg	1.79
PF05164	ZapA	1.79
PF09361	Phasin_2	0.89
PF00216	Bac_DNA_binding	0.89
PF05990	DUF900	0.89
PF04828	GFA	0.89
PF08402	TOBE_2	0.89
PF09286	Pro-kuma_activ	0.89
PF01799	Fer2_2	0.89
PF02518	HATPase_c	0.89
PF00487	FA_desaturase	0.89
PF07883	Cupin_2	0.89
PF13340	DUF4096	0.89
PF01545	Cation_efflux	0.89
PF06150	ChaB	0.89
PF13420	Acetyltransf_4	0.89
PF03992	ABM	0.89
PF00211	Guanylate_cyc	0.89
PF06718	DUF1203	0.89
PF02566	OsmC	0.89
PF04226	Transgly_assoc	0.89
PF00118	Cpn60_TCP1	0.89
PF08028	Acyl-CoA_dh_2	0.89
PF04392	ABC_sub_bind	0.89
PF00501	AMP-binding	0.89
PF05532	CsbD	0.89
PF02604	PhdYeFM_antitox	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1866	Phosphoenolpyruvate carboxykinase, ATP-dependent	Energy production and conversion [C]	5.36
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	1.79
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	1.79
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	1.79
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	1.79
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	1.79
COG3027	Cell division protein ZapA, inhibits GTPase activity of FtsZ	Cell cycle control, cell division, chromosome partitioning [D]	1.79
COG4934	Serine protease, subtilase family	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.89
COG4782	Esterase/lipase superfamily enzyme	General function prediction only [R]	0.89
COG4572	Cation transport regulator ChaB	Inorganic ion transport and metabolism [P]	0.89
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.89
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.89
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.89
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.89
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.89
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.89
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.89
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.89
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.89
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.89
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.89
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.89
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.89
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.89
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.89
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.68 %
Unclassified	root	N/A	22.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.68 %
Unclassified	root	N/A	22.32 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.68 %
Unclassified	root	N/A	22.32 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	65.18 %
Unclassified	root	N/A	22.32 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	61.61 %
Unclassified	root	N/A	22.32 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.89 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	31.25 %
Unclassified	root	N/A	22.32 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.32 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.46 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.89 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.32 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.46 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.89 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.89 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.89 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.32 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.46 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	0.89 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.89 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.89 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.32 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.46 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.46 %
Rhizobium mesoamericanum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium mesoamericanum	0.89 %
Methylobacterium sp. WSM2598	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. WSM2598	0.89 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.89 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_107046217	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300001396\|JGI20175J14863_1023567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	779	Open in IMG/M
3300004058\|Ga0055498_10110488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium mesoamericanum	566	Open in IMG/M
3300004635\|Ga0062388_102476633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	544	Open in IMG/M
3300005164\|Ga0066815_10017463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	969	Open in IMG/M
3300005205\|Ga0068999_10142343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300005332\|Ga0066388_103350525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	819	Open in IMG/M
3300005332\|Ga0066388_104516412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. WSM2598	709	Open in IMG/M
3300005338\|Ga0068868_101047659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	748	Open in IMG/M
3300005542\|Ga0070732_10731322	Not Available	603	Open in IMG/M
3300005764\|Ga0066903_100356929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2368	Open in IMG/M
3300006163\|Ga0070715_10091375	All Organisms → cellular organisms → Bacteria → Proteobacteria	1402	Open in IMG/M
3300006175\|Ga0070712_100135743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1870	Open in IMG/M
3300006175\|Ga0070712_101347781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	622	Open in IMG/M
3300006178\|Ga0075367_10185494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1297	Open in IMG/M
3300006642\|Ga0075521_10663033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300006854\|Ga0075425_100390404	All Organisms → cellular organisms → Bacteria	1603	Open in IMG/M
3300006904\|Ga0075424_100099264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3067	Open in IMG/M
3300009094\|Ga0111539_10026118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7148	Open in IMG/M
3300009094\|Ga0111539_10745907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1140	Open in IMG/M
3300009147\|Ga0114129_10414242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1774	Open in IMG/M
3300010049\|Ga0123356_11987475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	725	Open in IMG/M
3300010359\|Ga0126376_10077405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2459	Open in IMG/M
3300010359\|Ga0126376_11809373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	649	Open in IMG/M
3300010360\|Ga0126372_11245553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	770	Open in IMG/M
3300010376\|Ga0126381_102175041	Not Available	798	Open in IMG/M
3300010398\|Ga0126383_10516022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1256	Open in IMG/M
3300010398\|Ga0126383_10598845	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300011264\|Ga0151623_1130327	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300012080\|Ga0153921_1099981	Not Available	543	Open in IMG/M
3300012204\|Ga0137374_10707253	Not Available	756	Open in IMG/M
3300012207\|Ga0137381_10873214	Not Available	778	Open in IMG/M
3300012922\|Ga0137394_10971258	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300012931\|Ga0153915_11063121	Not Available	944	Open in IMG/M
3300012955\|Ga0164298_10474880	Not Available	829	Open in IMG/M
3300012985\|Ga0164308_11026936	Not Available	734	Open in IMG/M
3300013503\|Ga0120127_10023322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1116	Open in IMG/M
3300014308\|Ga0075354_1012288	Not Available	1265	Open in IMG/M
3300014324\|Ga0075352_1266418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300014501\|Ga0182024_11754552	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300015372\|Ga0132256_101205259	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300015373\|Ga0132257_104628116	Not Available	501	Open in IMG/M
3300016270\|Ga0182036_10413179	Not Available	1054	Open in IMG/M
3300016294\|Ga0182041_10381878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1193	Open in IMG/M
3300016357\|Ga0182032_10332218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1211	Open in IMG/M
3300016387\|Ga0182040_10428424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1044	Open in IMG/M
3300016422\|Ga0182039_11631295	Not Available	589	Open in IMG/M
3300017944\|Ga0187786_10330861	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300017947\|Ga0187785_10568384	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300017997\|Ga0184610_1183871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	695	Open in IMG/M
3300018072\|Ga0184635_10158457	Not Available	904	Open in IMG/M
3300018076\|Ga0184609_10349003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	690	Open in IMG/M
3300019869\|Ga0193705_1015147	Not Available	1682	Open in IMG/M
3300021168\|Ga0210406_10490504	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300021363\|Ga0193699_10010345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3341	Open in IMG/M
3300021402\|Ga0210385_10915787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	673	Open in IMG/M
3300021560\|Ga0126371_10157169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2340	Open in IMG/M
3300025321\|Ga0207656_10017987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	2776	Open in IMG/M
3300025914\|Ga0207671_10130596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1928	Open in IMG/M
3300025931\|Ga0207644_11727259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300025937\|Ga0207669_10857051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	756	Open in IMG/M
3300025961\|Ga0207712_11218259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	672	Open in IMG/M
3300026075\|Ga0207708_11427181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	608	Open in IMG/M
3300026273\|Ga0209881_1182795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300026859\|Ga0207859_1023129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	534	Open in IMG/M
3300026887\|Ga0207805_1019462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	687	Open in IMG/M
3300026890\|Ga0207781_1006848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1270	Open in IMG/M
3300026895\|Ga0207758_1000291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6592	Open in IMG/M
3300027654\|Ga0209799_1160534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300027703\|Ga0207862_1186576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617	Open in IMG/M
3300027898\|Ga0209067_10678337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	596	Open in IMG/M
3300027915\|Ga0209069_10602196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	633	Open in IMG/M
3300028711\|Ga0307293_10032035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1592	Open in IMG/M
3300028715\|Ga0307313_10006590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2809	Open in IMG/M
3300028819\|Ga0307296_10167479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1189	Open in IMG/M
3300029922\|Ga0311363_10517809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1206	Open in IMG/M
3300031081\|Ga0308185_1058185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300031170\|Ga0307498_10007677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2030	Open in IMG/M
3300031446\|Ga0170820_14580382	Not Available	963	Open in IMG/M
3300031474\|Ga0170818_102201557	Not Available	992	Open in IMG/M
3300031546\|Ga0318538_10643861	Not Available	575	Open in IMG/M
3300031744\|Ga0306918_11216560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	581	Open in IMG/M
3300031748\|Ga0318492_10419044	Not Available	705	Open in IMG/M
3300031846\|Ga0318512_10752567	Not Available	501	Open in IMG/M
3300031890\|Ga0306925_10847695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	944	Open in IMG/M
3300031893\|Ga0318536_10197938	All Organisms → cellular organisms → Bacteria	1023	Open in IMG/M
3300031910\|Ga0306923_10582755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1257	Open in IMG/M
3300031912\|Ga0306921_11148104	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300031912\|Ga0306921_11779126	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300031912\|Ga0306921_12147118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	590	Open in IMG/M
3300031942\|Ga0310916_11194728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	629	Open in IMG/M
3300031947\|Ga0310909_10806889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	775	Open in IMG/M
3300031947\|Ga0310909_11432204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	552	Open in IMG/M
3300031947\|Ga0310909_11580895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	520	Open in IMG/M
3300031962\|Ga0307479_11892629	Not Available	547	Open in IMG/M
3300031981\|Ga0318531_10028175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2290	Open in IMG/M
3300032075\|Ga0310890_11139458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	633	Open in IMG/M
3300032076\|Ga0306924_10041172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5070	Open in IMG/M
3300032076\|Ga0306924_10882588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	991	Open in IMG/M
3300032076\|Ga0306924_11905153	All Organisms → cellular organisms → Bacteria → Proteobacteria	616	Open in IMG/M
3300032091\|Ga0318577_10608646	Not Available	519	Open in IMG/M
3300032261\|Ga0306920_101814232	All Organisms → cellular organisms → Bacteria → Proteobacteria	860	Open in IMG/M
3300032770\|Ga0335085_12170326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	559	Open in IMG/M
3300032805\|Ga0335078_12190069	Not Available	583	Open in IMG/M
3300032828\|Ga0335080_11538861	Not Available	657	Open in IMG/M
3300032829\|Ga0335070_11470887	Not Available	621	Open in IMG/M
3300032892\|Ga0335081_10636087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1308	Open in IMG/M
3300032892\|Ga0335081_11853936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	650	Open in IMG/M
3300032897\|Ga0335071_12024772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300033289\|Ga0310914_10084061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2706	Open in IMG/M
3300033513\|Ga0316628_101453259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	913	Open in IMG/M
3300034090\|Ga0326723_0045121	Not Available	1857	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.71%
Host-Associated	Host-Associated	14.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.79%
Plants	Host-Associated → Plants	12.50%
Aquatic	Environmental → Aquatic	8.93%
Arthropoda	Host-Associated → Arthropoda	0.89%
Fungi	Host-Associated → Fungi	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.93%
Sediment	Environmental → Aquatic → Sediment	4.46%
Freshwater	Environmental → Aquatic → Freshwater	2.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.68%
Marine	Environmental → Aquatic → Marine	1.79%
Peat	Environmental → Terrestrial → Peat	1.79%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.89%
Roots	Host-Associated → Plants → Roots	0.89%
Mycelium	Host-Associated → Fungi → Mycelium	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.50%
Loam	Environmental → Terrestrial → Soil → Loam	11.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.46%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.79%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.79%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.89%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.89%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.75%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.57%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.79%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.89%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.89%
Acid Mine Drainage	Environmental → Aquatic → Freshwater → Groundwater → Acid Mine Drainage	0.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.89%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.04%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.04%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.25%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.57%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.68%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.79%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.79%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.79%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.89%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.89%
Sediment	Environmental → Aquatic → Freshwater → Groundwater → Acid Mine Drainage → Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.89%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.89%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001396	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012	Environmental	Open in IMG/M
3300004058	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqB_D1	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005205	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011264	Acid mine drainage microbial communities from Malanjkhand copper mine, India - M16 k-mer 63	Environmental	Open in IMG/M
3300012080	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ005 MetaG	Host-Associated	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300014308	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026273	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193 (SPAdes)	Environmental	Open in IMG/M
3300026859	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 25 (SPAdes)	Environmental	Open in IMG/M
3300026887	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 49 (SPAdes)	Environmental	Open in IMG/M
3300026890	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 51 (SPAdes)	Environmental	Open in IMG/M
3300026895	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 12 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300031081	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_159 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1070462172	3300000955	Soil	MPRYYFCLTDGKQVLNNHKGIDLSGNAAAREDALVLARDLKHGAVMPGWDWSGW
JGI20175J14863_10235672	3300001396	Arctic Peat Soil	MPRYYFHLTDGKQVLNNHKGIDLSGNAAARADAVALARDLKHGAAMPGWNWTGWFIVIV
Ga0055498_101104881	3300004058	Natural And Restored Wetlands	MPRYYFHLTDGKQVLNNHKGIDLSGNAVAREDALALARDLKHGAVMP
Ga0062388_1024766331	3300004635	Bog Forest Soil	MPRYFFRLTNGKRVLDNHQGIDLPGDAAALTDALTLARDLKHGATMPGWDWT
Ga0066815_100174631	3300005164	Soil	MPRYYFHLTDGNQVLNNHKGIDLSGDAAARDDAMTLARDLKHGAVMRGWNW
Ga0068999_101423431	3300005205	Natural And Restored Wetlands	MPRYYFHLTDGNQVLNNHKGIDLSGNATARTDALALARDLKNGA
Ga0066388_1033505252	3300005332	Tropical Forest Soil	MPLYFFQLTDGEQVLDNHQGLDLPGDAAARDDALALARDLKHG
Ga0066388_1045164121	3300005332	Tropical Forest Soil	MPLYYFHLTDGEQVLDNHQGLDLPGEAAARDDALALARDLKHGNVMPGWDW
Ga0068868_1010476592	3300005338	Miscanthus Rhizosphere	MPRYYFRLTDGNQILNNHKGVDLAGDAAALEDALALARDLKHGPVMQGWDWAGWFVKIVD
Ga0070732_107313221	3300005542	Surface Soil	MPRYYFHLTDGKSVLNNHQGLELAGNAAARADAVALADDLRRGVKMAGWKWDG
Ga0066903_1003569293	3300005764	Tropical Forest Soil	MPRYFFHLTDGKKILNNHKGIDLSGNAAAREDALALAR
Ga0070715_100913754	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MARYYFHLTDGKQVLTTHKGVDLPGNAAAREEALRFAGELKHGKKV
Ga0070712_1001357431	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPRYYFHLTDGDQVLTNHKGVDLPGSAAARADAVVFARDLKGGAV
Ga0070712_1013477811	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPRYYFQLTDGKQVLNNHQGVDLAGNAAARDDAVVLARDLKHGNAMPGWNWTGWFVAI
Ga0075367_101854941	3300006178	Populus Endosphere	MPRYFFHLTDGKETVNNPEGMDLPGTAAAREEAMVLARDLKHGKVMP
Ga0075521_106630332	3300006642	Arctic Peat Soil	MPRYYFHLTDGKQVLNNHKGIDLSGNAAARADAVALARDL
Ga0075425_1003904044	3300006854	Populus Rhizosphere	MPRYYFQLTDGKQVLNNHQGVDLAGNAAARDDAVVLARDLKHGNAM
Ga0075424_1000992641	3300006904	Populus Rhizosphere	MPRYYFHLTDGKQVLNNHKGIDLSGNAAAREDALALARDLKHGAVMPGWNWTGWFVVI
Ga0111539_100261189	3300009094	Populus Rhizosphere	MPRYYFHLTDGKQVLDNHKGIDLPGNAAARTDAVALARDLKHGAVMPGWN*
Ga0111539_107459073	3300009094	Populus Rhizosphere	MPRYFFHLSDGKQVLNNHKGIDLSGNAAARENALVLARDLKHGAV
Ga0114129_104142421	3300009147	Populus Rhizosphere	MPRYYFHLTDGKQVLNNHKGIDLSGNAAAREDALTLARDLKHGAVMPGWNWTG
Ga0123356_119874752	3300010049	Termite Gut	MPRYYFLLTDGEQVLNNHKGIDLAGDAAARTDAVALARDLKHGTVMPNWDW
Ga0126376_100774053	3300010359	Tropical Forest Soil	MPRYYFHLTDGKQVLNNHKGVDLPANAAARDDAVVLARDL
Ga0126376_118093731	3300010359	Tropical Forest Soil	MPRYYFHLSDGKQVLNNHKGIDLSGNAAAREDALVLARNLKHGAAMPGWDWSGWF
Ga0126372_112455532	3300010360	Tropical Forest Soil	MPLYYFRLTDGEQVLDNHQGLDLAGEAAAREDALALARDLKHG
Ga0126381_1021750412	3300010376	Tropical Forest Soil	MPRYYFHLTDGKQVLNNHKGVDLAGNAAARANAVVLARDLNHGAVMPGW
Ga0126383_105160221	3300010398	Tropical Forest Soil	MPRYYFHLSDGKKVLSNHKGIDLSGNAAAREDALVLARDLKHGAVMPGWDWSG
Ga0126383_105988452	3300010398	Tropical Forest Soil	MPRYYFRLTDGEQVLDNHQGLDLAGEAAAREDALALARDLKRGNVMPGWDWDGWFINI
Ga0151623_11303272	3300011264	Sediment	MRDNAMPRYYFHLTDGKQVLNNHQGIDLPGNAAARADAVALAGNLTSGAV
Ga0153921_10999811	3300012080	Attine Ant Fungus Gardens	MPRYYFHLTDGKNVLSNHQGIDLAGDAAAHADAVALAD
Ga0137374_107072531	3300012204	Vadose Zone Soil	MRYYFHLTDGKEVVKQPNGVELPGRAAAREDALVLARDLREGKVFPGRKWDDW
Ga0137381_108732142	3300012207	Vadose Zone Soil	MPRYFFHLTDGKQVVKSHKPEGLELPGNAAARAEALMLARDLKHGRLMPE
Ga0137394_109712582	3300012922	Vadose Zone Soil	MPRYFFHLTDGKRVEKGDRPQGIELAGNATAREEALMLARDLKHGKLMPGRKW
Ga0153915_110631211	3300012931	Freshwater Wetlands	MPRYYFHLTDGRNLLNNHQGVDLPGNAAARADAMILA
Ga0164298_104748801	3300012955	Soil	MPRYYFHLSDGDQVLTNHKGIDLPGNAAARADAVVL
Ga0164308_110269362	3300012985	Soil	MPRYFFHLTDGKQVLNNHKGIDLSGNAAAREDAMAFARDL
Ga0120127_100233221	3300013503	Permafrost	MPRFYFHLTDGKQVLSNHKGVDLSGNAAARDDAVVLARDLKHGEAMPGWDW
Ga0075354_10122881	3300014308	Natural And Restored Wetlands	MPRYYFHLTDGKQVLNNHKGIDLSGNAVAREDALA
Ga0075352_12664181	3300014324	Natural And Restored Wetlands	MPRYYFHLTDGKQVLNNHKGIDLSGNAVAREDALALARDLKHGAVMPGWNW
Ga0182024_117545521	3300014501	Permafrost	MPRYYFHLTDGKNILSNHQGIDLAGDAAAHADALALADDLRRGVKMPGGKWDGW
Ga0132256_1012052591	3300015372	Arabidopsis Rhizosphere	MPRYYFHLTDGNKVLNNHKGIDLSGNAAARDDAMALARDL
Ga0132257_1046281161	3300015373	Arabidopsis Rhizosphere	MPRYYFHLTDGDQVLTNHKGVDLPGNAAARADAVV
Ga0182036_104131791	3300016270	Soil	MPRYYFHLTNGNEVLTNHTGVDLPGNAAARTDAVA
Ga0182041_103818781	3300016294	Soil	MPRYYFHLSDGKQVLNNHKGIDLSGNAAAREDALALARHLKHGAVMPGWDWS
Ga0182032_103322183	3300016357	Soil	MPRYYFHLTNGNEVLTNHTGVDLPGNAAARTDAVALARD
Ga0182040_104284242	3300016387	Soil	MPRYYFRLINGKQVLNNHKGIDLPGNAVARTDAVALARDLKHGKVMPNWDWRGWFV
Ga0182039_116312952	3300016422	Soil	MPRYYFHLSNGTQVLDNHKGLDLPGDAAAREDAVVLARDLKHGAAMPG
Ga0187786_103308612	3300017944	Tropical Peatland	MPRYYFRLTDGAQVLDNHQGVDLAGDAAAREDAVALARDLKQGVAMPRWDWGGWFV
Ga0187785_105683842	3300017947	Tropical Peatland	MPRYYFNLTDGKQTLSNHKGIDLPGHAAARADAVEFARGLKRGTAMPGW
Ga0184610_11838711	3300017997	Groundwater Sediment	MPRYYFHLTDGKETVKNPEGMDLSGAAAAREEAMVLARDLKHGKVMPGR
Ga0184635_101584572	3300018072	Groundwater Sediment	MPRYYFHLTDGKQVLNNHKGIYLSGNAAAREEALAMERDL
Ga0184609_103490032	3300018076	Groundwater Sediment	MPRYYFHLTDGKETVKNPEGMDLSGTAAAREEAMVLARDLKHGKVMPGRSWNGW
Ga0193705_10151474	3300019869	Soil	MPRYYFHLTDGKQVLNNHKGIDLPGNAAVREDAVALARDLK
Ga0210406_104905043	3300021168	Soil	MPRYFFHLTDGKQVLSNHKGIDLPGDAAARDDAVVLARDLKHGAVMPGWDWTG
Ga0193699_100103453	3300021363	Soil	MPRYYFHLTDGKETVKNPEGMDLSGAAAAREEAMVLARDLKHGKVMPGRSWNGWLV
Ga0210385_109157871	3300021402	Soil	MPRYYFHLTNGRDVLSNHKGVDLPGHAAARTDAVALARDLKGGVAMPGWEWT
Ga0126371_101571694	3300021560	Tropical Forest Soil	MPRYYFHLSDGKKVLGNHKGIDLSGNAAAREDALVLARDLKHGAVMPGWDWSGWFVM
Ga0207656_100179874	3300025321	Corn Rhizosphere	MPRYFFHLSDGRQVLNNHKGIDLSGNAAARENALVLGRDLKHGAVMPGWDWG
Ga0207671_101305964	3300025914	Corn Rhizosphere	MPRYFFHLSDGKQVLNNHKGIDLSGNAAARENALVLARD
Ga0207644_117272592	3300025931	Switchgrass Rhizosphere	MPRYYFRLTDGNQILNNHKGVDLAGDAAALEDALALARDLKHGPVMQGWDWAGWFVKIV
Ga0207669_108570511	3300025937	Miscanthus Rhizosphere	MPRYFFHLSDGRQVLNNHKGIDLSGNAAARENALVLARDLKHGAVMPGWD
Ga0207712_112182591	3300025961	Switchgrass Rhizosphere	MPRYYFHLTDGKETVNNPQGMDLPGTAAAREEAMVLARDLKHGKVMPG
Ga0207708_114271812	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MPRYFFHLSDGKQVLNNHKGIDLSGNAAARENALVLARDLK
Ga0209881_11827951	3300026273	Soil	MPRYYFHLTDGKQVLNNHKGIDLSGNAAARADAVALARDLKHGAAMPGWN
Ga0207859_10231291	3300026859	Tropical Forest Soil	MPRYYFHLGDGKQVLNNHKGIDLSGNAAAREDALVLARDLKHGAVMPGWDWSGWFVTIVD
Ga0207805_10194621	3300026887	Tropical Forest Soil	MPRYFFHLTDGKHVLNNHKGIDLAGNAAARDDAVTLARDLKHGAIMRGWNWTGWFVTIL
Ga0207781_10068483	3300026890	Tropical Forest Soil	MPRYFFHLTDGKHVLNNHKGIDLAGNAAARDDAVTLARDLKHGAIMRGWNWTGW
Ga0207758_10002918	3300026895	Tropical Forest Soil	MPRYYFHLGDGKQVLNNHKGIDLSGNAAAREDALVLARDLKHGAVMPGWDWSGWFVTI
Ga0209799_11605341	3300027654	Tropical Forest Soil	MPRYYFRLTDGEQVLDNHQGLDLAGEAAAREDALALARDLKRGDVMPGWEWDGWFINIV
Ga0207862_11865761	3300027703	Tropical Forest Soil	MPRYYFHLTNGEQVLDNHKGLDLPGDAAAREDAVVLARDLKHGAAMPGWDWAGWLVVINNEQG
Ga0209067_106783372	3300027898	Watersheds	MPRSYFHLTDGKQAQNNRKGVDLPSDAAARADAGTLAYDL
Ga0209069_106021961	3300027915	Watersheds	MPRYYFHLTDGKKVLNNHKGIDLSGNAAAREDALALARDLKHGAIMRGWNWTGWFV
Ga0307293_100320351	3300028711	Soil	MPRYYFHLTDGKETVKNPEGMDLSGTAAAREEAMVLARDLKHGKVMP
Ga0307313_100065901	3300028715	Soil	MPRYYFHLTDGKETVKNPEGMDLSGTAAAREEAMVLARDLKHGKVMPG
Ga0307296_101674793	3300028819	Soil	MPRYYFHLTDGKETVKNPEGMDLSGTAAAREEAMVLARDLKHGKVMPGRSWNGWLVT
Ga0311363_105178092	3300029922	Fen	MPRYFFHLTDGKQVLNNHKGIDLAGNAAAIANAVVLAGDLKAGAVMPGFDWTG
Ga0308185_10581852	3300031081	Soil	MPRYYFHLTDGKQVLDNHKGIDLSGNAAAREDALAPARDLKHGAVMPGWNWTGWFVVIVD
Ga0307498_100076772	3300031170	Soil	MPRYYFHLTDGKQVLNNHKGIDLSGNAAAREDALALARDLKHGAVMPGWNWTG
Ga0170820_145803822	3300031446	Forest Soil	MPRYYFHLTDGKQVLNNHKGIDLPGNAAARENAVALAPDLE
Ga0170818_1022015571	3300031474	Forest Soil	MPRYYFHLTDGKQVLNNHKGVDLSGNAAAREDALALARDLKHGAVMP
Ga0318538_106438611	3300031546	Soil	MPRYYFHLSNGTQVLDNHKGLDLPGDAAAREDAVVLARDLKHGAAMPGWDWAGWL
Ga0306918_112165602	3300031744	Soil	MPRYYFRLINGKQVLNNHKGIDLPGNAVARTDAVALARDLKHGKVMPNWDWR
Ga0318492_104190442	3300031748	Soil	MPRYYFHLSNGTQVLDNHKGLDLPGDAAAREDAVVLARDLKHGAAMPGWDWAGWLV
Ga0318512_107525671	3300031846	Soil	MPRYYFHLTNGKQVLDNHKGINLPGDAATRNDAVELARDLK
Ga0306925_108476953	3300031890	Soil	MPRYYFHLSDGKQVLNNHKGIDLSGNAAAREDALALARDLKHGAVMPGWDWSGWFVTI
Ga0318536_101979381	3300031893	Soil	MPRYYFHLSDGKKVLSNHKGIDLSGNAAAREDALVLARDLKHGAVMPGWDW
Ga0306923_105827553	3300031910	Soil	MPRYYFHLSDGKQVLNNHKGIDLPGNAAAREDALALA
Ga0306921_111481043	3300031912	Soil	MPRYYFHLSDGKKVLSNHKGIDLSGNAAAREDALVLARDLKHGAVMPGWDWTG
Ga0306921_117791261	3300031912	Soil	MVFFAADRFAMPRYYFHLSDGKQVLNNHKGIDLAGNAAAREDALALARDLKHGAVMPGW
Ga0306921_121471181	3300031912	Soil	MPRYYFRLINGKQVLNNHKGIDLPGNAVARTDAVALARDLKHGKVMPNWDWRGWFVAIV
Ga0310916_111947281	3300031942	Soil	MPRYHFHLTDGKQVLKNHKGIDLPGNAAARDDALVLARDLKHGPV
Ga0310909_108068891	3300031947	Soil	MPRYYFHLSNGTQVLDNHKGLDLPGDAAAREDAVVLARDLKHGAAMPGWDWAGWLVVINNEQ
Ga0310909_114322041	3300031947	Soil	MPRYYFHLTNGKEVLNNHKGMDLPGHAAARTDAVALARDLKHGAAMP
Ga0310909_115808951	3300031947	Soil	MPRYYFRLINGKQVLNNHKGIDLPGNAVARTDAVALARDLKHGK
Ga0307479_118926291	3300031962	Hardwood Forest Soil	MPRYYFHLTDGKNVLSNHQGIDLAGDAAARADALALADDLRRG
Ga0318531_100281751	3300031981	Soil	MPRYYFHLSDGKKVLSNHKGIDLSGNAAAREDALVLARDLKHGAVMPGWDWSGW
Ga0310890_111394581	3300032075	Soil	MPRYYFHLTDGNQVLNNHKGIDLSGDAAARDDAMTLARDLKHGAVMRGW
Ga0306924_100411721	3300032076	Soil	MPRYYFHLSDGKQVLNNHKGIDLSGNAAAREDALALARDLKHGAVMPGWDWSGWF
Ga0306924_108825882	3300032076	Soil	MPRYYFHLTNGKEVLSNHKGIDLPGHAAARTDALALARDLKHGAAMPGWDWTGWFVMIV
Ga0306924_119051532	3300032076	Soil	MPRYYFHLTNGKEVLNNHKGIDLPGHAAARTDALALARDLKHGAARQHK
Ga0318577_106086461	3300032091	Soil	MPRYYFHLSNGTQVLDNHKGLDLPGDAAAREDAVVLARDLKHGAAMPGWDWAGWLVV
Ga0306920_1018142322	3300032261	Soil	MPRYYFHLTNGNEVLNNHKGIDLPGHAAARTDALALARDLKHGAAMPGWDWTGWF
Ga0335085_121703261	3300032770	Soil	MPRYYFHLTDGKQVLNNHKGIDLSGNAAARDDALALARDLKHGAVMPGW
Ga0335078_121900692	3300032805	Soil	MARFYFHLTDGKQVLSNHKGLDLAGDAAARDNAVAL
Ga0335080_115388611	3300032828	Soil	MPRYFFHLTDGKQVLNNHKGLDLAGNAAARDDALVLARDLKHGALMAGWN
Ga0335070_114708871	3300032829	Soil	MPRYYFHLTDGLHVLNNHKGIDVPGNAAARDDALALARDFKHGAIMP
Ga0335081_106360873	3300032892	Soil	MPRYYFRLTDGAQVLDNHQGVDLAGDAAAREDAVALARDLKQGAAMPGWDWGGWFVRIV
Ga0335081_118539362	3300032892	Soil	VLRYYFHLTNGQRVLNNHKGIDLSGKATAREGALPLARDLKHGSAMPGWELGRLVGENR
Ga0335071_120247721	3300032897	Soil	MPRYYFHLTDGAQLLNNHKGVDLAGDAAAREDATVLARHLKHADAMRGWD
Ga0310914_100840616	3300033289	Soil	MPRYHFHLTDGKQVLKNHKGIDLPGNAAARDDALVLARDLKHGPVMQGWD
Ga0316628_1014532591	3300033513	Soil	MPRYYFHLTDGNQVLNNHKGIDLSGNAAARADAVALARDLKHGAV
Ga0326723_0045121_1_162	3300034090	Peat Soil	MPRYYFHLTDGNQVLNNHKGIDLSGNAAARADAVAFARDLKNGAVMPGWNWTGW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084799

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences