Metagenome / Metatranscriptome Family F084798

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084798
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	58 residues
Representative Sequence	MPAEADKRPDKSQTHEPAKGGLKPAHENAYPSGDSPKAQGDKLQHAVDEAAERKKK
Number of Associated Samples	93
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.57 %
% of genes near scaffold ends (potentially truncated)	30.36 %
% of genes from short scaffolds (< 2000 bps)	92.86 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.536 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.821 % of family members)
Environment Ontology (ENVO)	Unclassified (41.071 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (59.821 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.67% β-sheet: 0.00% Coil/Unstructured: 83.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF03328	HpcH_HpaI	28.57
PF02515	CoA_transf_3	4.46
PF02803	Thiolase_C	2.68
PF12172	DUF35_N	1.79
PF03401	TctC	0.89
PF13586	DDE_Tnp_1_2	0.89
PF02900	LigB	0.89
PF07690	MFS_1	0.89
PF01656	CbiA	0.89
PF01391	Collagen	0.89
PF13432	TPR_16	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	28.57
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	28.57
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	28.57
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	4.46
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	2.68
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.54 %
Unclassified	root	N/A	4.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.54 %
Unclassified	root	N/A	4.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.54 %
Unclassified	root	N/A	4.46 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	87.50 %
Unclassified	root	N/A	4.46 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.89 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	71.43 %
Unclassified	root	N/A	4.46 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16.07 %
Unclassified	root	N/A	4.46 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	13.39 %
Unclassified	root	N/A	4.46 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	13.39 %
Unclassified	root	N/A	4.46 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	13.39 %
Unclassified	root	N/A	4.46 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.89 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.89 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	11.61 %
Unclassified	root	N/A	4.46 %
Rhodoplanes sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	1.79 %
Bradyrhizobium sp. BTAi1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. BTAi1	0.89 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	0.89 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_120934694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2555	Open in IMG/M
3300004114\|Ga0062593_101349741	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300004114\|Ga0062593_101501085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	726	Open in IMG/M
3300004114\|Ga0062593_102005334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	643	Open in IMG/M
3300004114\|Ga0062593_103307532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300004153\|Ga0063455_101589974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300004156\|Ga0062589_100452784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1064	Open in IMG/M
3300004157\|Ga0062590_100801312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	866	Open in IMG/M
3300004157\|Ga0062590_101417222	All Organisms → cellular organisms → Bacteria → Proteobacteria	692	Open in IMG/M
3300004463\|Ga0063356_102432696	All Organisms → cellular organisms → Bacteria → Proteobacteria	801	Open in IMG/M
3300004479\|Ga0062595_101232293	Not Available	667	Open in IMG/M
3300004479\|Ga0062595_101774475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300004479\|Ga0062595_102128484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300005335\|Ga0070666_11077692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	597	Open in IMG/M
3300005365\|Ga0070688_100815055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	731	Open in IMG/M
3300005441\|Ga0070700_100308960	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300005458\|Ga0070681_11700598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300005548\|Ga0070665_101860569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300005614\|Ga0068856_101172223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	785	Open in IMG/M
3300005614\|Ga0068856_101324817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	735	Open in IMG/M
3300005618\|Ga0068864_100309824	All Organisms → cellular organisms → Bacteria	1480	Open in IMG/M
3300005842\|Ga0068858_100279082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1591	Open in IMG/M
3300006028\|Ga0070717_11401592	All Organisms → cellular organisms → Bacteria → Proteobacteria	635	Open in IMG/M
3300006048\|Ga0075363_100603363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	658	Open in IMG/M
3300006057\|Ga0075026_100992346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	522	Open in IMG/M
3300006163\|Ga0070715_10099439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1354	Open in IMG/M
3300006172\|Ga0075018_10206834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	933	Open in IMG/M
3300006178\|Ga0075367_10401523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	867	Open in IMG/M
3300006178\|Ga0075367_11104239	Not Available	507	Open in IMG/M
3300006572\|Ga0074051_11404600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	630	Open in IMG/M
3300006576\|Ga0074047_11868642	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300006580\|Ga0074049_12930339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	805	Open in IMG/M
3300006854\|Ga0075425_101860730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	675	Open in IMG/M
3300006881\|Ga0068865_101401890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	624	Open in IMG/M
3300006904\|Ga0075424_102569847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300007004\|Ga0079218_12487947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300007788\|Ga0099795_10518749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	558	Open in IMG/M
3300009093\|Ga0105240_11960232	All Organisms → cellular organisms → Bacteria → Proteobacteria	609	Open in IMG/M
3300009098\|Ga0105245_12123999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	615	Open in IMG/M
3300009098\|Ga0105245_12208343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	604	Open in IMG/M
3300009148\|Ga0105243_12968270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	514	Open in IMG/M
3300009551\|Ga0105238_11594246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	683	Open in IMG/M
3300009840\|Ga0126313_10316299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1224	Open in IMG/M
3300010045\|Ga0126311_10620262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	858	Open in IMG/M
3300010371\|Ga0134125_12239569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	594	Open in IMG/M
3300010403\|Ga0134123_11112796	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300010403\|Ga0134123_11364024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	747	Open in IMG/M
3300011423\|Ga0137436_1025872	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300012208\|Ga0137376_10754361	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300012212\|Ga0150985_100278762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	650	Open in IMG/M
3300012212\|Ga0150985_114967722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300012469\|Ga0150984_105798728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	574	Open in IMG/M
3300012469\|Ga0150984_105920147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300012469\|Ga0150984_106721557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	640	Open in IMG/M
3300012902\|Ga0157291_10302782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	555	Open in IMG/M
3300012907\|Ga0157283_10081204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	826	Open in IMG/M
3300012924\|Ga0137413_10783072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	731	Open in IMG/M
3300012929\|Ga0137404_10197925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1700	Open in IMG/M
3300012930\|Ga0137407_11362865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	674	Open in IMG/M
3300012951\|Ga0164300_10100880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. BTAi1	1267	Open in IMG/M
3300013296\|Ga0157374_12142276	Not Available	586	Open in IMG/M
3300013297\|Ga0157378_12682141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	551	Open in IMG/M
3300015195\|Ga0167658_1042595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1144	Open in IMG/M
3300015371\|Ga0132258_11462342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1726	Open in IMG/M
3300015372\|Ga0132256_102224201	All Organisms → cellular organisms → Bacteria → Proteobacteria	653	Open in IMG/M
3300015373\|Ga0132257_104010653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	536	Open in IMG/M
3300015374\|Ga0132255_101252271	All Organisms → cellular organisms → Bacteria → Proteobacteria	1118	Open in IMG/M
3300015374\|Ga0132255_102152829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	850	Open in IMG/M
3300015374\|Ga0132255_103905201	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300018029\|Ga0187787_10279766	Not Available	619	Open in IMG/M
3300018077\|Ga0184633_10559970	Not Available	545	Open in IMG/M
3300018422\|Ga0190265_10090902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2829	Open in IMG/M
3300018432\|Ga0190275_10132849	All Organisms → cellular organisms → Bacteria → Proteobacteria	2266	Open in IMG/M
3300018466\|Ga0190268_10333349	All Organisms → cellular organisms → Bacteria → Proteobacteria	933	Open in IMG/M
3300018476\|Ga0190274_12587139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	604	Open in IMG/M
3300021384\|Ga0213876_10802262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300025899\|Ga0207642_10768188	All Organisms → cellular organisms → Bacteria → Proteobacteria	611	Open in IMG/M
3300025901\|Ga0207688_10322897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	947	Open in IMG/M
3300025908\|Ga0207643_10676841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	666	Open in IMG/M
3300025911\|Ga0207654_10253088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1181	Open in IMG/M
3300025918\|Ga0207662_10059755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2285	Open in IMG/M
3300025921\|Ga0207652_11630857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	549	Open in IMG/M
3300025927\|Ga0207687_10412122	All Organisms → cellular organisms → Bacteria → Proteobacteria	1113	Open in IMG/M
3300025933\|Ga0207706_11266936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	610	Open in IMG/M
3300025936\|Ga0207670_11405639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	592	Open in IMG/M
3300025937\|Ga0207669_10814668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	775	Open in IMG/M
3300025940\|Ga0207691_10945591	All Organisms → cellular organisms → Bacteria → Proteobacteria	720	Open in IMG/M
3300025944\|Ga0207661_12052533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	518	Open in IMG/M
3300025945\|Ga0207679_11723322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	573	Open in IMG/M
3300025945\|Ga0207679_11752634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	568	Open in IMG/M
3300025960\|Ga0207651_11481918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300025972\|Ga0207668_11681862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	573	Open in IMG/M
3300026023\|Ga0207677_11749620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	577	Open in IMG/M
3300026035\|Ga0207703_10862866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	866	Open in IMG/M
3300026078\|Ga0207702_10402319	All Organisms → cellular organisms → Bacteria → Proteobacteria	1321	Open in IMG/M
3300026089\|Ga0207648_10069832	All Organisms → cellular organisms → Bacteria → Proteobacteria	3061	Open in IMG/M
3300026121\|Ga0207683_10545835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1071	Open in IMG/M
3300027903\|Ga0209488_10532695	All Organisms → cellular organisms → Bacteria → Proteobacteria	858	Open in IMG/M
3300031232\|Ga0302323_101501126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	759	Open in IMG/M
3300031241\|Ga0265325_10000237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	39283	Open in IMG/M
3300031241\|Ga0265325_10531300	All Organisms → cellular organisms → Bacteria → Proteobacteria	509	Open in IMG/M
3300031247\|Ga0265340_10022258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3242	Open in IMG/M
3300031548\|Ga0307408_101218623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	703	Open in IMG/M
3300031716\|Ga0310813_10126779	All Organisms → cellular organisms → Bacteria → Proteobacteria	2023	Open in IMG/M
3300031716\|Ga0310813_10167061	All Organisms → cellular organisms → Bacteria → Proteobacteria	1783	Open in IMG/M
3300031716\|Ga0310813_12285277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300031852\|Ga0307410_10332355	All Organisms → cellular organisms → Bacteria → Proteobacteria	1209	Open in IMG/M
3300031938\|Ga0308175_100681610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1114	Open in IMG/M
3300032012\|Ga0310902_10913089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300032275\|Ga0315270_11092497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300033475\|Ga0310811_11398075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	539	Open in IMG/M
3300034268\|Ga0372943_1135687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	51.79%
Host-Associated	Host-Associated	48.21%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	48.21%
Terrestrial	Environmental → Terrestrial	47.32%
Aquatic	Environmental → Aquatic	4.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.75%
Sediment	Environmental → Aquatic → Sediment	3.57%
Roots	Host-Associated → Plants → Roots	3.57%
Freshwater	Environmental → Aquatic → Freshwater	0.89%
Peat	Environmental → Terrestrial → Peat	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.29%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.61%
Loam	Environmental → Terrestrial → Soil → Loam	9.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.57%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.68%
Lake	Environmental → Aquatic → Freshwater → Lake	0.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.68%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.79%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	8.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.36%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.68%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.68%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.79%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.79%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.89%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1209346943	3300002568	Soil	MSAETDKRPDKSQTHEPAKGGLKPPHDDAYPSGDSPKAQGDKLQHAVDEAAEGKKTAS*
Ga0062593_1013497411	3300004114	Soil	MADASTNKRPDPSQTDQPAKGGLKPADPKVHPSGDSPKPQGDKLEHAVDEAAKGKKK*
Ga0062593_1015010852	3300004114	Soil	MATDTKTDKRPDKAQSREPAKGGLKPAHENAYPSGDSPKAQGDKLQHAVDKAAEGKK*
Ga0062593_1020053342	3300004114	Soil	MADTRTDNRPDKSQLQEPAKGGPKPAHENAYPSGDSPKPHGDKLQHSTDEAAKKKP*
Ga0062593_1033075322	3300004114	Soil	MADASTDKRPTPSQTDEPAKGGLKPADPKTHPSGDSPKAQGDKLQHAVDKAAESKTK*
Ga0063455_1015899741	3300004153	Soil	GRAAALSWAPSQEKPMPASTEARPDKSQTQDPAKGGMKPADPNTHPSGDSPKPQGDKLQHAVDDAADRKPK*
Ga0062589_1004527841	3300004156	Soil	VMPAEADKRPDKSQTHEPAKGGLKPAHENAYPSGDSPKAQGDKLQHAVDEAANRKSKAG*
Ga0062590_1008013122	3300004157	Soil	MPAEADKRPDKSQTHEPAKGGLKPAHENAYPSGDSPKAQGDKLQHAVDEAANRKSKAG*
Ga0062590_1014172221	3300004157	Soil	MADAKPDKRPEQSQTDDPAKGGIKPAHKSTYPSGDSPKPQGDKLQHAVDDAAERKKKT
Ga0063356_1024326962	3300004463	Arabidopsis Thaliana Rhizosphere	MTEQTKKRPEPAQTAEPAKGGVEQPHRKPYPSGDSPKPQGDKLEHAADEATKRKQS*
Ga0062595_1012322931	3300004479	Soil	MTANHKTDTRPERSQADEPAKGGTKLAQQRPFPSGDSPKPHGDKLEHAVDEAAHQTNKK*
Ga0062595_1017744752	3300004479	Soil	MSAETDKRPDKSQTHEPAKGGLKPPHDDAYPSGDSPKAQGDKLQHAVDEAAKGKKKAG*
Ga0062595_1021284841	3300004479	Soil	PDKSQTHEPAKGGLKPARDDAYPSGDSPKAQGDKLQHAVDEAANRKSKAG*
Ga0070666_110776922	3300005335	Switchgrass Rhizosphere	MPAEADKRPDKSQTHEPAKGGLKPARDDAYPSGDSPKAQGDKLQHAVDEAAVERKKKAS*
Ga0070688_1008150552	3300005365	Switchgrass Rhizosphere	KRPTPSQTDEPAKGGLKPADPKVHPSGDSPKAQGDKLQHAVDEAAEGAEKKKN*
Ga0070700_1003089601	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	KRPDKAQSREPAKGGLKPAHENAYPSGDSPKAQGDKLQHAVDKAAEGKK*
Ga0070681_117005982	3300005458	Corn Rhizosphere	MATDTKTDKRPDKAQSREPAKGGLKPAHENAYPSGDSPKAQGDKLQHAVDKAA
Ga0070665_1018605691	3300005548	Switchgrass Rhizosphere	MSAEADKRPTNDQTREPAKGGLKQPHDNAYPCGDSPKAQGDKLQHAVDEAAERKKKAS*
Ga0068856_1011722232	3300005614	Corn Rhizosphere	MTDTGTNKRPDPSQADEPAKGGLKPADPKVHPSGDSPKPQGDKLQHAVDEAAKGKK*
Ga0068856_1013248172	3300005614	Corn Rhizosphere	MPAEADKRAEKLQTHEPAKGGLKPAHDNAYPSGDSPKAQGDKLQHAVDEAAEGKKTAS*
Ga0068864_1003098243	3300005618	Switchgrass Rhizosphere	MPAEADKRPDKSQTHEPAKGGLKPPHDSAYPSGDSPKAQGDKLQHAVDEAAKGKNKAG*
Ga0068858_1002790823	3300005842	Switchgrass Rhizosphere	MSAETDKRPDKSQTHEPAKGGLQPPHDDAYPSGDSPKAQGDKLQHAVDEAAEGKKTAS*
Ga0070717_114015922	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKAMPAGANKRPEKSQTHEPAKGGLKPARENAYPSGDSPKAQGDKLQHAVDEAAARKKKAS*
Ga0075363_1006033631	3300006048	Populus Endosphere	MSAEAEKRPTNAQTRDPAKGGLKPAHENAYPSGDSPKAQGDKLQHAVDEAAERKKKAG*
Ga0075026_1009923461	3300006057	Watersheds	ALSSTAQENSMPAETKADKLPDPSQTRDPAKGGIKPAHENAYPSGDSPKGHGDKLQHAVDEAAGGKKKDEGQVP*
Ga0070715_100994391	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MSAKADKRPEKSQTHEPAKGGLKPAHGSVYPSGDSPKAQGDKLQHALDEAANRKKKAG*
Ga0075018_102068342	3300006172	Watersheds	MPAETKTDKRPDPSQTRDPAKGGTKPAHENAYPSGDSPKGHGDKLQHAVDEAGGGKKKD*
Ga0075367_104015232	3300006178	Populus Endosphere	MPAEAKTDKRPEKSQSHEPAKGGTKPAHDDVYPSGDSPKAQGDKLQHAVDEAARRKQKG*
Ga0075367_111042392	3300006178	Populus Endosphere	MADAKTEKRPDKSQLQEPAKGGTKPAHENAYPSGDSPKPHGDKLEHAVDEAIAPKRKTGSI*
Ga0074051_114046002	3300006572	Soil	MPAEADKRPDKSQTHEPAKGGLKPARGDAYPSGDSPKAQGDKLQHALDEAAE
Ga0074047_118686422	3300006576	Soil	MPAEADKRPEKSQTHEAAKGGLKPAHDSAYPSGDSPKAQGDRLQHAVDEAANRKKKAG*
Ga0074049_129303392	3300006580	Soil	MPAEADKRPDKSQTHEPAKGGLKPARGDAYPSGDSPKAQGDKLQHALDEAAEGKKKAG*
Ga0075425_1018607302	3300006854	Populus Rhizosphere	MPAEADKRPDKSQTHEPAKGGLKPAHDSTYPSGDSPKAQGDKLQHAVDEAAVGKKKAG*
Ga0068865_1014018902	3300006881	Miscanthus Rhizosphere	MSAEADKRPTNDQTREPAKGGLKQPHDNAYPSGDSPKAQGDKLQHAVDEAA
Ga0075424_1025698472	3300006904	Populus Rhizosphere	MPAETTDKRPRPAESSQSDEPAKGGTKPAHNKPYPAGDSPKPHGDKLQHAVDEVSGGKKPS*
Ga0079218_124879471	3300007004	Agricultural Soil	VESSQLDEPAKGGTKPAHDKPFPAGDSPKPHGDKLQHAVDEVGGGKKPA*
Ga0099795_105187492	3300007788	Vadose Zone Soil	MPAEADKRPEKSQTHEPAKGGLKPAHDSAYPSGDSPKAQGDKLQHAVDEAAVGKKKAG*
Ga0105240_119602322	3300009093	Corn Rhizosphere	MADAKTDKRPEHSQSDEPAKGGLKPPHQKPHPSGDSEKAEGDKLQHAVDDAAHKKR*
Ga0105245_121239992	3300009098	Miscanthus Rhizosphere	MSAETDKRPDKSQTHEPAKGGLKPAHENAYPSGDSPKAQGDKLQHAVDEAAEGKKTAS*
Ga0105245_122083432	3300009098	Miscanthus Rhizosphere	MPAEADKRPDKSQTHEPAKGGLKPAHENAYPSGDSPKAQGDKLQHAVDEADNRKSKAG*
Ga0105243_129682701	3300009148	Miscanthus Rhizosphere	PDKSQTHEPAKGGLQPPHDDAYPSGDSPKAQGDKLQHAVDEAAEGKKTAS*
Ga0105238_115942462	3300009551	Corn Rhizosphere	MDSQDKRPEKSDDPAKGGMKPADNKVHPSGDDPKRQGDELQHAVDQAAERRKAK*
Ga0126313_103162992	3300009840	Serpentine Soil	MAEAKTDNRPDKTESREPAKGGTKPAHENTYPSGDSPKPHGDKLQRAADEIAKK*
Ga0126311_106202621	3300010045	Serpentine Soil	LEAQESIQENAEENVMPAEADKRPEKSQTHEPAKGDLKPAHDSAYPSGDSPKAQGDKLQHAVDEAAVGKKKAS*
Ga0134125_122395691	3300010371	Terrestrial Soil	MADASTDKRPTPSQTDEPAKGGLKPADPKTHPSGDSPKAEGDKLRHAVDKAADHVRKKAKGDLLQNSR
Ga0134123_111127962	3300010403	Terrestrial Soil	MADASTDKRPTPSQTDEPAKGGLKPADPKVHPSGDSPKAQGDKLQHAVDEAAEGAEKKKN
Ga0134123_113640241	3300010403	Terrestrial Soil	AMATDTKTDKRPDKAQSREPAKGGLKPAHENAYPSGDSPKAQGDKLHHAVDKAAEGKK*
Ga0137436_10258723	3300011423	Soil	MPAEPDKRPEKSQTHEPAKGGLKPAHDSAYPSGDSPKAQGDKLQHAVDEAAVGKKKAS*
Ga0137376_107543612	3300012208	Vadose Zone Soil	MPAAADKRPEKSQTHEPAKGGLKPPHDNAYPSGDSPKAQGDKLQHAVDEAAARKKKAS*
Ga0150985_1002787622	3300012212	Avena Fatua Rhizosphere	MSAETDNRPDKSQTHEPAKGGLKPPHDDAYPSGDSPKAQGDKLQHAVDEAAEGKKTAS*
Ga0150985_1149677222	3300012212	Avena Fatua Rhizosphere	EDVMPAEADKRPDKSQTHEPAKGGLKPAHENAYPSGDSPKAQGDKLQHAVDEAANRKSKAG*
Ga0150984_1057987281	3300012469	Avena Fatua Rhizosphere	HPMADAKSDNRPDESQTREPATGGTKPAHENAYPSGDSPKRQGDKLEHAVDEAAKRKNQ*
Ga0150984_1059201472	3300012469	Avena Fatua Rhizosphere	MPAEADKRPDKSQTHEPAKGGLKPAHDDAFPSGDSPKAQGDKLQHAVDEAAERNKKAS*
Ga0150984_1067215571	3300012469	Avena Fatua Rhizosphere	MADAKSDNRPDKSQSREPAKGGTKPAHENAYPSGDSPKAQGDKLEHAVDGAAKRKNQ*
Ga0157291_103027821	3300012902	Soil	QETPMADASTDKRPTPSQTDEPAKGGLKPADPKTHPSGDSPKAQGDKLQHAVDKAAESKTK*
Ga0157283_100812042	3300012907	Soil	MPAEADKRPDKSQTHEPAKGGLKPAHENAYPSGDSPKAQGDKLQHAVDEAANRK
Ga0137413_107830722	3300012924	Vadose Zone Soil	MPAAADKRPEKSQTHEPAKGGLKPPHDNAYPSGDSPKAQGDKLQHAVDEAAERKKKAS*
Ga0137404_101979253	3300012929	Vadose Zone Soil	MSAEADKRPEKSQTHEPAKGGLKPARDDAYPSGDSPKAQGDKLQHAVDEAAERKKKN*
Ga0137407_113628652	3300012930	Vadose Zone Soil	MSAEADKRPEKSQTHEPAKGGLKPARDDAYPSGDSPKRHGDKLEHVIEKSSEKKAG*
Ga0164300_101008804	3300012951	Soil	LSWADQENVMSAETDKRPDKSQTHEPAKGGLKPPHDDAYPSGDSPKAQGDKLQHAVDEAAEGKKPAS*
Ga0157374_121422762	3300013296	Miscanthus Rhizosphere	MSAETDKRPDKSQTHEPAKGGLKPPHDDAYPSGDSPKAQGDKLQHAVDEAAEGQKTAS*
Ga0157378_126821411	3300013297	Miscanthus Rhizosphere	SDNRPDKSQTREPAKGGTKPAHDNAYPSGDSPKPHGDKLQRAADEIAKK*
Ga0167658_10425951	3300015195	Glacier Forefield Soil	MPAETKADKLPDPSQTRDPAKGGIKPAHENAYPSGDSPKGHGDKLQHAVDEAAGGKKKDEGQVP*
Ga0132258_114623422	3300015371	Arabidopsis Rhizosphere	MADAKTDKRPEKSQRDEPAKGGTKPPHKNAYPSGDSPKPQGDKLQHAVDEAAERKKAG*
Ga0132256_1022242012	3300015372	Arabidopsis Rhizosphere	MADAKTDKRPEKSQTDEPAKGGTKPPHKNAYPSGDSPKPQGDKLQHAVDEAAERKKAG*
Ga0132257_1040106531	3300015373	Arabidopsis Rhizosphere	SWAVQEVSMPAEADKRPEKSQTHEAAKGGLKPAHDSAYPSGDSPKAQGDKLQHALDEAANRKKKAG*
Ga0132255_1012522712	3300015374	Arabidopsis Rhizosphere	MSAKADKRPEKSQTHEPAKGGLKPAHDSAYPSGDSPKAQGDRLQHAVDEAANRKKKAG*
Ga0132255_1021528293	3300015374	Arabidopsis Rhizosphere	MADAKTDERPEKSQGGEPAKGGTKPPHKNAYPSGDSPKPQGDKLQHAVDEAAERKKAG*
Ga0132255_1039052012	3300015374	Arabidopsis Rhizosphere	MASTNPEKQRPGSGQTDNPAKGGVTPAHRKPFLSGDSPKPQGDKLQHAVDEAADRRKKSE
Ga0187787_102797661	3300018029	Tropical Peatland	MAVETRTDQRPEKSQTDEPAKGSIKPAHKTSYPSGDGLKREGDKLQHAVDEAAKPR
Ga0184633_105599702	3300018077	Groundwater Sediment	MPAEPDKRPEKSQTHEPAKGGLKPAHDSAYPSGDSPKAQGDKLQHAVDEAAVGKKKAS
Ga0190265_100909023	3300018422	Soil	MAEAKPDKRIEKSQTDEPAKGGLKPADEGLQPSGDSPKPHGDKLQHAVDEAAEKK
Ga0190275_101328493	3300018432	Soil	MADAKPDNRPDQSQTHEPAKGGTKPAHENAYPSGDSPKPHGDKLEHAVDEAAKK
Ga0190268_103333492	3300018466	Soil	MPAAPNEKRPIEKSQTDEPAKGGIKPAKPGLHPSGDSPKPHGDKLQHAVDEAADTEK
Ga0190274_125871391	3300018476	Soil	MPAEADKRPEKSQTHEPAKGGLKPAHDSAYPSGDSPKAQGDKLQHAVDEAAD
Ga0213876_108022621	3300021384	Plant Roots	MADASTNKRPAPSQTDEPAKGGLKPADPKVHPSGDSPKPQGDKLEHAVDEAAERK
Ga0207642_107681882	3300025899	Miscanthus Rhizosphere	MPAEADKRPDKSQTHEPAKGGLKPAHENAYPSGDSPKAQGDKLQHAVDEAANRKSKAG
Ga0207688_103228972	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MATDTKTDKRPDKAQSREPAKGGLKPAHENAYPSGDSPKAQGDKLQHAVDKAAEGKK
Ga0207643_106768413	3300025908	Miscanthus Rhizosphere	MPAESYKRPEKSQTHEPAKGGLKPAHENAYPSGDSPKAQGDKLLHAVDEAANRKSKAG
Ga0207654_102530882	3300025911	Corn Rhizosphere	MAEASTNKRPDPSQADEPAKGGLKPADPKVRPSGDSPKAEGDKLQHAVDEAAEGAEKKKN
Ga0207662_100597553	3300025918	Switchgrass Rhizosphere	MPAEADKRPDKSQTHEPAKGGLKPAHENAYPSGDSPKAQGDKLQHAVDEAAKGKNKAG
Ga0207652_116308571	3300025921	Corn Rhizosphere	MAEASTNKHLNPSQTDEPAKGGLKPADPKVHPSGDSPKPQGDKLEHAVDEAAKGKKK
Ga0207687_104121222	3300025927	Miscanthus Rhizosphere	MSAETDKRPDKSQTHEPAKGGLQPPHDDAYPSGDSPKAQGDKLQHAVDEAAEGKKTAS
Ga0207706_112669363	3300025933	Corn Rhizosphere	KRPDKSQTHEPAKGGLKPAHENAYPSGDSPKAQGDKLDEAANRKSKAG
Ga0207670_114056392	3300025936	Switchgrass Rhizosphere	TQENAMPADAEKRPTDAQTREPAKGGVKPAQQGTHPSGDSPKAQGDKLQHAVDEAADRKKKAS
Ga0207669_108146682	3300025937	Miscanthus Rhizosphere	MADASTDKRPTPSQTDEPAKGGLKPADPKTHPSGDSPKAQGDKLQHAVDKAAESKTK
Ga0207691_109455912	3300025940	Miscanthus Rhizosphere	MPAEADKRPDKSQTHEPAKGGLKPAHENAYPSGDSPKAQGDKLQHAVDEAAEGKKKAG
Ga0207661_120525332	3300025944	Corn Rhizosphere	TNKRPDPSQTDQPAKGGLKPADPKVHPSGDSPKPQGDKLEHAVDEAAKGKKK
Ga0207679_117233222	3300025945	Corn Rhizosphere	MPAEADKRPEKSQTHEPAKGGLKPAHENAYPSGDSPKAQGDKLQHAVDEAAKGKKKAG
Ga0207679_117526341	3300025945	Corn Rhizosphere	ADASTNKRPDPSQTDQPAKGGLKPADPKVHPSGDSPKPQGDKLEHAVDEAAKGKKK
Ga0207651_114819182	3300025960	Switchgrass Rhizosphere	MANADKRPDPSQSDEPAKGGLKPADSKVRPSGDTPKAQGDTLQHAVDEAAAGKGK
Ga0207668_116818621	3300025972	Switchgrass Rhizosphere	SMPAEADKRPEKSQTHEAAKGGLKPAHDSAYPSGDSPKAQGDRLQHAVDEAANRKKKAG
Ga0207677_117496202	3300026023	Miscanthus Rhizosphere	MPAEADKRPDKSQTHEPAKGGLKPAHENAYPSGDSPKAQGDKLQHAVDE
Ga0207703_108628661	3300026035	Switchgrass Rhizosphere	MPAEADKRPDKSQTHEPAKGGLKPAHENAYPSGDSPKAQGDKLQHAVDEAAERKKK
Ga0207702_104023193	3300026078	Corn Rhizosphere	MTDTGTNKRPDPSQADEPAKGGLKPAHDNAYPSGDSPKAQGDKLQHAVDEAAEGKKTAS
Ga0207648_100698325	3300026089	Miscanthus Rhizosphere	MPAEADKRPDKSQTHEPAKGGLKPAHENAYPSGDSPKAQGDKLDEAANRKSKAG
Ga0207683_105458351	3300026121	Miscanthus Rhizosphere	SVQEDVMPAEADKRPDKSQTHEPAKGGLKPAHENAYPSGDSPKAQGDKLQHAVDEAANRKSKAG
Ga0209488_105326952	3300027903	Vadose Zone Soil	MPAEADKRPEKSQTHEPAKGGLKPAHDSAYPSGDSPKAQGDKLQHAVDEAAVGKKKAG
Ga0302323_1015011262	3300031232	Fen	MPAEADKRPEKAQTHEPSKGGLEPAHKDAYPSGDSPKGHGDKLQHAVDEAAVTKKKSG
Ga0265325_1000023728	3300031241	Rhizosphere	MADADNAKHAKPRQDNDPAKGGTTPPHKETYKSGDSPKPQGDKLQHAVDEAAQRQNKKN
Ga0265325_105313001	3300031241	Rhizosphere	MPATDKRPEKSQTDEPAKGGLKPAHENAFPSGDSAKRQGDKLQHAVDEATAWDKKPG
Ga0265340_100222583	3300031247	Rhizosphere	MPATEKRPEKSQTDEPAKGGLKPAHENAFPSGDSAKRQGDKLQHAVDEATAWDKKPG
Ga0307408_1012186232	3300031548	Rhizosphere	MAADTKTEKRPDQPQTHEPAKGGLKPAHKDAFPSGDSPKAQGDKLQHAVDEAAQRKKKSG
Ga0310813_101267793	3300031716	Soil	MADACTNKRPDPSQTDQPAKGGLKPADPKVHPSGDSPKPQGDKLEHAVDEAAKGKKK
Ga0310813_101670612	3300031716	Soil	MTDTGTNKRPDPSQADEPAKGGLKPADPKVHPSGDSPKPQGDKLQHAVDEAAKGKK
Ga0310813_122852772	3300031716	Soil	MADAKTDKRPEKSQGDEPAKGGTKPPHKNAYPSGDSPKPQGDKLQHAVDEAAERKKAG
Ga0307410_103323553	3300031852	Rhizosphere	MAADTKTEKRPDQPQTHEPAKGGLKPAHKDAFPSGDSPKAQGDKLQHAVDEAAERKKKSG
Ga0308175_1006816102	3300031938	Soil	MADASTNKRPDPSQTDQPAKGGLKPADPKVHPSGDSPKPQGDKLEHAVDEAAKGKKK
Ga0310902_109130891	3300032012	Soil	MPAEADKRPEKSQTHEAAKGGLKPAHDSAYPSGDSPKAQGDRLQHAVDEAANRKKKAG
Ga0315270_110924971	3300032275	Sediment	MPADTKTEKQPDPSQSRDPAKGGTTPAHKDTYPSGDSPKAQGDKLQHAVDEAARPKK
Ga0310811_113980752	3300033475	Soil	MTDTGTNKRPDPSQADEPAKGGLKPADPQVHPSGDSPKPQGDKLQHAVDEAAKGKK
Ga0372943_1135687_248_418	3300034268	Soil	MADVKADNRTDKSQTREPAKGGTKPAHDQAYSSGDSPKPQGDKLQHAVDEAANKKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084798

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences