Metagenome / Metatranscriptome Family F084797

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084797
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	94 residues
Representative Sequence	INDSCTLYGARRFVIECPAPSTTVFLAMKNSIIFISALSLVAMMLASCNSVPSAFAPDETATTGVTRQTNETRPERSAEDSVNSISGGHY
Number of Associated Samples	105
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	18.75 %
% of genes near scaffold ends (potentially truncated)	47.32 %
% of genes from short scaffolds (< 2000 bps)	92.86 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.107 % of family members)
Environment Ontology (ENVO)	Unclassified (33.929 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.107 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 23.73% β-sheet: 0.00% Coil/Unstructured: 76.27%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01740	STAS	5.36
PF13211	DUF4019	4.46
PF13884	Peptidase_S74	3.57
PF03400	DDE_Tnp_IS1	1.79
PF13430	DUF4112	0.89
PF00501	AMP-binding	0.89
PF04773	FecR	0.89
PF14534	DUF4440	0.89
PF14020	DUF4236	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1662	Transposase and inactivated derivatives, IS1 family	Mobilome: prophages, transposons [X]	1.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	76.79 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	76.79 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	71.43 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	4.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	71.43 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	4.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	71.43 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	4.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	71.43 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	3.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	71.43 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.89 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.89 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig559631	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	632	Open in IMG/M
2170459016\|G1P06HT02HHM5P	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	625	Open in IMG/M
2189573004\|GZGWRS401EUDW0	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300002899\|JGIcombinedJ43975_10012314	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1369	Open in IMG/M
3300002910\|JGI25615J43890_1091923	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300005093\|Ga0062594_101657543	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300005174\|Ga0066680_10226979	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1183	Open in IMG/M
3300005176\|Ga0066679_10755410	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	625	Open in IMG/M
3300005187\|Ga0066675_10741561	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	739	Open in IMG/M
3300005293\|Ga0065715_10459752	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	817	Open in IMG/M
3300005294\|Ga0065705_10140620	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2163	Open in IMG/M
3300005332\|Ga0066388_105500016	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	642	Open in IMG/M
3300005343\|Ga0070687_100932237	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300005366\|Ga0070659_101040627	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	720	Open in IMG/M
3300005437\|Ga0070710_11047439	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	596	Open in IMG/M
3300005446\|Ga0066686_10905866	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	579	Open in IMG/M
3300005450\|Ga0066682_10611911	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	682	Open in IMG/M
3300005451\|Ga0066681_10178080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1263	Open in IMG/M
3300005471\|Ga0070698_100950639	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	806	Open in IMG/M
3300005530\|Ga0070679_101325200	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300005555\|Ga0066692_10036976	All Organisms → cellular organisms → Bacteria	2631	Open in IMG/M
3300005561\|Ga0066699_10076042	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2151	Open in IMG/M
3300005576\|Ga0066708_10255142	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1115	Open in IMG/M
3300005764\|Ga0066903_100086593	All Organisms → cellular organisms → Bacteria	4131	Open in IMG/M
3300006034\|Ga0066656_10462042	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300006163\|Ga0070715_10114619	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1276	Open in IMG/M
3300006796\|Ga0066665_11359667	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300006797\|Ga0066659_10132414	All Organisms → cellular organisms → Bacteria	1747	Open in IMG/M
3300006797\|Ga0066659_10164628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1590	Open in IMG/M
3300006797\|Ga0066659_10180638	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1528	Open in IMG/M
3300007258\|Ga0099793_10466396	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300009012\|Ga0066710_100553891	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1740	Open in IMG/M
3300009090\|Ga0099827_10625660	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	929	Open in IMG/M
3300009098\|Ga0105245_10403096	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1367	Open in IMG/M
3300009100\|Ga0075418_13093833	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	507	Open in IMG/M
3300010046\|Ga0126384_12080849	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	544	Open in IMG/M
3300010301\|Ga0134070_10119498	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300010303\|Ga0134082_10237525	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	753	Open in IMG/M
3300010333\|Ga0134080_10558351	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300010335\|Ga0134063_10529546	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300010359\|Ga0126376_11582870	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	687	Open in IMG/M
3300010366\|Ga0126379_10787003	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300010999\|Ga0138505_100075416	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300011270\|Ga0137391_10326905	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1320	Open in IMG/M
3300012096\|Ga0137389_11357181	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	605	Open in IMG/M
3300012200\|Ga0137382_10057863	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2444	Open in IMG/M
3300012201\|Ga0137365_10361410	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1072	Open in IMG/M
3300012202\|Ga0137363_10514695	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300012202\|Ga0137363_10588214	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	939	Open in IMG/M
3300012202\|Ga0137363_10930110	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300012208\|Ga0137376_10476427	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1083	Open in IMG/M
3300012208\|Ga0137376_10873709	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300012210\|Ga0137378_10608761	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1002	Open in IMG/M
3300012285\|Ga0137370_10443721	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	790	Open in IMG/M
3300012285\|Ga0137370_10611859	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	674	Open in IMG/M
3300012350\|Ga0137372_10304602	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300012357\|Ga0137384_10486479	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1014	Open in IMG/M
3300012359\|Ga0137385_10321572	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1328	Open in IMG/M
3300012361\|Ga0137360_10982847	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300012361\|Ga0137360_11068316	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	697	Open in IMG/M
3300012362\|Ga0137361_11787375	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	533	Open in IMG/M
3300012363\|Ga0137390_10173242	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2145	Open in IMG/M
3300012582\|Ga0137358_10581581	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	752	Open in IMG/M
3300012896\|Ga0157303_10265429	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300012917\|Ga0137395_10131506	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1697	Open in IMG/M
3300012923\|Ga0137359_11509328	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	560	Open in IMG/M
3300012924\|Ga0137413_10091450	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1875	Open in IMG/M
3300012929\|Ga0137404_10698087	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	917	Open in IMG/M
3300012958\|Ga0164299_10411587	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	872	Open in IMG/M
3300012960\|Ga0164301_10846118	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	704	Open in IMG/M
3300012975\|Ga0134110_10124932	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1051	Open in IMG/M
3300012987\|Ga0164307_10566161	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	870	Open in IMG/M
3300012989\|Ga0164305_11313060	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	633	Open in IMG/M
3300013297\|Ga0157378_12676118	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300015051\|Ga0137414_1010469	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	752	Open in IMG/M
3300015359\|Ga0134085_10561513	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300015372\|Ga0132256_103703915	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300015373\|Ga0132257_102533386	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300015374\|Ga0132255_103364977	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	681	Open in IMG/M
3300018433\|Ga0066667_10272881	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1297	Open in IMG/M
3300019361\|Ga0173482_10676263	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300019865\|Ga0193748_1018034	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	662	Open in IMG/M
3300019885\|Ga0193747_1069864	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	866	Open in IMG/M
3300019886\|Ga0193727_1002288	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	8071	Open in IMG/M
3300019997\|Ga0193711_1006790	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300020012\|Ga0193732_1072474	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300020016\|Ga0193696_1038567	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1272	Open in IMG/M
3300020062\|Ga0193724_1026548	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1234	Open in IMG/M
3300021168\|Ga0210406_10157503	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1904	Open in IMG/M
3300021405\|Ga0210387_10468281	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300021418\|Ga0193695_1047227	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	934	Open in IMG/M
3300024179\|Ga0247695_1038918	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	684	Open in IMG/M
3300025905\|Ga0207685_10033583	All Organisms → cellular organisms → Bacteria	1856	Open in IMG/M
3300025928\|Ga0207700_10013409	All Organisms → cellular organisms → Bacteria	5332	Open in IMG/M
3300025930\|Ga0207701_10440482	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1119	Open in IMG/M
3300026301\|Ga0209238_1238359	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	539	Open in IMG/M
3300026304\|Ga0209240_1117266	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	917	Open in IMG/M
3300026324\|Ga0209470_1202995	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	836	Open in IMG/M
3300026331\|Ga0209267_1305177	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300026530\|Ga0209807_1230749	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	630	Open in IMG/M
3300026538\|Ga0209056_10268693	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1200	Open in IMG/M
3300026551\|Ga0209648_10180101	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1636	Open in IMG/M
3300027483\|Ga0207637_1006079	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	633	Open in IMG/M
3300028807\|Ga0307305_10499267	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300028811\|Ga0307292_10278277	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	698	Open in IMG/M
3300028876\|Ga0307286_10336696	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	561	Open in IMG/M
3300030917\|Ga0075382_11604111	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	630	Open in IMG/M
3300031231\|Ga0170824_107383025	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1767	Open in IMG/M
3300031912\|Ga0306921_12346759	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	558	Open in IMG/M
3300031945\|Ga0310913_11187918	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300032205\|Ga0307472_100386010	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1165	Open in IMG/M
3300032261\|Ga0306920_103624465	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.96%
Host-Associated	Host-Associated	7.14%
Engineered	Engineered	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.96%
Plants	Host-Associated → Plants	7.14%
Solid Waste	Engineered → Solid Waste	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.46%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.68%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.89%
Grass	Engineered → Solid Waste → Grass	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.04%
Loam	Environmental → Terrestrial → Soil → Loam	8.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.79%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.89%
Composting	Engineered → Solid Waste → Grass → Composting	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	23.21%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.68%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.79%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.89%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.18%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.36%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019865	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s1	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019997	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021418	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2	Environmental	Open in IMG/M
3300024179	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027483	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05.2A1-12 (SPAdes)	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300030917	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_09801040	2124908045	Soil	LYGARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSTFAPDETATTGVTRETNETPRERSAEDSVNSISGGHY
2ZMR_01165860	2170459016	Switchgrass, Maize And Mischanthus Litter	MVINDSCTLYDSQRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCTSAFAPDETATTGVARQTNETRPERSADSVNSISGGHY
FG2_08700790	2189573004	Grass Soil	LSAGCLRGWEYAIDNSCTLHGARRFVIEYPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSVSSAFAPDETATTGVTRQTNETPQRSAEDANSISGGHY
JGIcombinedJ43975_100123142	3300002899	Soil	LPDGKCGHDVIDESCTLYGARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIFAPDETATAGVTRQTNETRPERSANSISGGHY*
JGI25615J43890_10919232	3300002910	Grasslands Soil	IDYSCTLYDSQRFVIECPAPSTTIVLAMKNSIIFISALSLVAMMLASCNSVFEPDETATTGARRQTNETPPKRSAEDSANSIGGGHY*
Ga0062594_1016575431	3300005093	Soil	INDSCTLYGARRFVIECPAPSTTIFLTMKNSIIFISAHSLVAMMLASCNSLPSAFAPDETATTHVTSHTNETPPERSAEDSANSISGGHY*
Ga0066680_102269793	3300005174	Soil	RRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSVFAPDETETTGVTRQTNETRPERSAQDSVNSISGGHY*
Ga0066679_107554102	3300005176	Soil	MPFDDSCTLYCARRFVIECPAPSTTIVLAMKNSIIFISALSLVAMMLASCNSVFAPDETATTGVTRQTNETPRERSAEDSVNSISGGHY*
Ga0066675_107415612	3300005187	Soil	MNLQPVDTAPDLIDDSCTLYGAWRFVIECPAPSTTMFLAMKNSIIFISALSLVAMMLASCNSVFAPDETATTGVTRQTNETPPPERTAEDSVNSISGGHY*
Ga0065715_104597521	3300005293	Miscanthus Rhizosphere	MTRRLHINEPCMLYDPRRFVIECRSPSTTIFLAMKNSIIFISALSLVAMVLTSCNSVFAPDETATTHVTTHTNETPPERSAEDSANSISGGHY*
Ga0065705_101406204	3300005294	Switchgrass Rhizosphere	MICRAYIDESCTLYGARRFVIECPAPSTTIFLAMKNSIIFISVLSLVAMMLASCNSIPSAFAPDETVTTGVTRQTNETRPERSAEDSVNSISGGHY*
Ga0066388_1055000161	3300005332	Tropical Forest Soil	MCCHSVGYASQDRARIADDGRMVNESGAYVSNDFCTLYGSRRFVIECPAPSMTIFLAMKNSIIFISALSLAAMMLASCNSVFAPDETATTGVTSQTHQNSPDWQAHNETPPERSAAERNSISAGGY*
Ga0070687_1009322371	3300005343	Switchgrass Rhizosphere	INDSCTLYGARRFVIECPAPSTTVFLAMKNSIIFISALSLVAMMLASCNSVPSAFAPDETATTGVTRQTNETRPERSAEDSVNSISGGHY*
Ga0070659_1010406271	3300005366	Corn Rhizosphere	MTRRLHINEFARFNDPRRFVIECRSPSTTIFLGMKNSIIFISALSLVAMVLTSCNSVFAPDETATTHVTTHTNETPPERSAEDSANSISGGHY*
Ga0070710_110474391	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	CRTTTRHRYAINDSCTLYGARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCSSTFAPDETATTGTGRYFNEPPPERSAEDSVNSMSGGHY*
Ga0066686_109058661	3300005446	Soil	MNLQPVDTAADPIDESCTLYGARRFVIECPAPSTTIVLAMKNSIIFISALSLVAMMLASCNSVFAPDETATTGVTRQTNETPRQRSAEDSVNSISGGHY*
Ga0066682_106119112	3300005450	Soil	MNLQPVDTAADLINDSCTLYSARRFVIECPAPSTTIVLAMKNSIIFISALALVAMMLASCNSVFAPDETATTGVTRQTNETPPPERTAEDSVNSISGGHY*
Ga0066681_101780803	3300005451	Soil	MPFDDSCNLYGARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSAFAPDETATTGATRQTNETRPERSAENSVNSMSGGHH*
Ga0070698_1009506391	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MNPDSVNIAPDLIEESCTLYGARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCSSALAPDETATTGVAHYTNDTRPERSAEGSANSISGGHY*
Ga0070679_1013252003	3300005530	Corn Rhizosphere	SQRFVIECRAQSRTILLAMKYSIIFISAFCLVAMMLASCSSAFAPDETARTGVTSQTDETRPERSAEDSANSISGGHN*
Ga0066692_100369761	3300005555	Soil	MSQCSANVIDKSCALYGARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSVFAPDETATTGVTRQTNETPPERSAEDSVNSISGGHY*
Ga0066699_100760424	3300005561	Soil	MSQCSANVIDKSCALYGARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSVFAPDETETTGVTRQTNETRPERSAQDSVNSISGGHY*
Ga0066708_102551421	3300005576	Soil	ARRFVIECPAQSTTIVLAMKNSIIFISALSLLAMMLASCNSVFAPDETATTGVTRQTNETPPPERTAEDSVNSISGGHY*
Ga0066903_1000865936	3300005764	Tropical Forest Soil	MISRHPINEACTLYESRRFVIECPAPSTTILLAMKYSIIFISVLSLAAMLLASCGSVLAPDETATTGVTNQTNETPPERSVDKGSISGGSY*
Ga0066656_104620422	3300006034	Soil	MNLQPVDTVADFIDDFCTLYGARRFVIECPAPSTTIVLAMKNSIIFISALSLVAMMLASCNSIPSAFAPDETATTGATRQTNETRPERSAEDSVNSISGGHY*
Ga0070715_101146193	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	SCTLYGARRFVIECPAPSTTVFLAMKNSIIFISALSLVAMMLASCKSVPSAFAPDETATTSETWHTNETPPEPSAEGSGNSISGGHY*
Ga0066665_113596671	3300006796	Soil	INESYTLYGERRFVIECPAPSTTMFLAMKNSIIFISALSLVAMMLASCNSIPSAFAPDETARTGVTSQTNETPRERSAEDSVNSISGGHY*
Ga0066659_101324144	3300006797	Soil	INESYTLYGERRFVIECPAPSTTIFLAMKNSIIFISALSLVTMMLASCNIIPSAFAPDETAKTGVTSQTNETPPRRSAEDSVNSISGGHY*
Ga0066659_101646281	3300006797	Soil	INESYTLYGERRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSVFAPDETETTGVTRQTNETRPERSAQDSVNSISGGHY*
Ga0066659_101806384	3300006797	Soil	MPFDDSCTLYCARRFVIECPAPSTTIVLAMKNSIIFISALSLVAMMLASCNSVFAPDETATTGVTRQTNETPPERSTQDSANSISGGHY*
Ga0099793_104663962	3300007258	Vadose Zone Soil	CRAVAIQPDAVSDSCTLYDSQRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSAFAPDETARTGVTSQTNETPPERNAEDSVNSISGGHY*
Ga0066710_1005538914	3300009012	Grasslands Soil	ERRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSVFAPDETETTGVTRQTNETRPERSAQDSVNSISGGHY
Ga0099827_106256602	3300009090	Vadose Zone Soil	MAGCSGHDLIDDSCTLYGERRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSVFAPDETATTGVTRQTNETPRERSAEDSVNSISGGHY*
Ga0105245_104030962	3300009098	Miscanthus Rhizosphere	VSLGSRRFVIECPALSTTIFPAMKNSMIFISVLSLVAMILASCSSTFAPDETATTGVTRQADETQHERSAEDSVNSISGGHY*
Ga0075418_130938331	3300009100	Populus Rhizosphere	PDDHAPPGCHERNPARFTTKLFVIECPAPSTTILFAMKNSNIFISGLSLVAMTLASCNSVPSAFAPDETATTGVTRQTDETRPERSAEDSVNSISGGHY*
Ga0126384_120808491	3300010046	Tropical Forest Soil	MILSRLKPAFYGRAGRKNGHPIGEHSCTLYSARCSVIESTVKDKFLGMKNSIIFISALSLVAMMLASCESVFAPDESATTGATRQTNEAPPERSANSISGGAY*
Ga0134070_101194981	3300010301	Grasslands Soil	MRLFRHLIDESCTLYSARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSVFAPDETATTGVTRQTNETPPERSAQDSVNSISGGHY*
Ga0134082_102375251	3300010303	Grasslands Soil	CRLIAVFRNRPSPLLWLRGPVQMNLQPVATAADLIDDSCTLYCSRRFVIECPAPSTTIVLAMKNSIIFISALSLVAMMLASCNSVFAPDETATTGVTRQTNETPPERSAQDSANSISGGHY*
Ga0134080_105583512	3300010333	Grasslands Soil	GQDRCRIADGCRMSQCSANVIDKSCALYGARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSVFAPDETATTGVTRQTNETHHERSAEDSVNSISGGHY*
Ga0134063_105295462	3300010335	Grasslands Soil	DCRMVNDPAMMASTNRYTLYGERRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSVFAPDETATTGVTRQTNETPPERSAQDSVNSISGGHY*
Ga0126376_115828701	3300010359	Tropical Forest Soil	LLFTRQGQNDNCGTLYGAQRFVIESPAPSTTIFLGMKNSIIFISALSLAAMMLASCNSVPSVFAPDETARTGVTTQTEETRPERSAEDSVNSMSGGHY*
Ga0126379_107870031	3300010366	Tropical Forest Soil	AVSFSSAQTTKRPADPCTLYGARCSMIESLAVNDDVLGMRNSITFISALSLVAMMLASCASAFAPDETATTHVTSQTNEAPPERSAEDSVNSISGGHY*
Ga0138505_1000754162	3300010999	Soil	RRSDFRCAAIDYSCTLYDSQRFVIECRAPSTTICLGMKNSIIFISALSLVAMMLASCNSIPSAFAPDETATTGVTRQTNETRPERSAEDSVNSISGGHY*
Ga0137391_103269053	3300011270	Vadose Zone Soil	MAGCSGHDLIDDSCTLYGARRFVIECPAPSTTIVLAMKNSIIFMSALSLVAMMLASCNSVFAPDETATTGVTRQTNETPRERSAEDSVNSISGGHY*
Ga0137389_113571811	3300012096	Vadose Zone Soil	MPFDDSCTLYGARRFVIECPAPSTTIVLAMKNSIIFISALSLVAMMLASCNSIPSAFAPDETATTGVTRQTNETPPERSAEGSANSISGGHY*
Ga0137382_100578631	3300012200	Vadose Zone Soil	YGERRFVIECPAPSTTIFLAMKNSIIFISALSLVAMVLASCNSIPSAFAPDETAKTGVTSQTNETPPRRSAEDSVNSISGGHY*
Ga0137365_103614102	3300012201	Vadose Zone Soil	MRLFRHLIDESCTLYSARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMVLASCNSIPSAFAPDETATTGATRQTNETRPERSAEDSVNSISGGHY*
Ga0137363_105146951	3300012202	Vadose Zone Soil	RRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSAFAPDETATTGETWHTNETPPEPSAEGSGNSISGGHY*
Ga0137363_105882142	3300012202	Vadose Zone Soil	MSDLPTSIDESCTLYGARRFVIECPAPSTTVFLAMKNTIIFISALSLVAMMLASCKSIPSAFAPDETATTGETWQTNETPPERSAEGSGNSISGGHY*
Ga0137363_109301102	3300012202	Vadose Zone Soil	FTARRFVIECPAPSTTIFLSMKNSLIFISALSLVAMMLASCNSILAPDETATTGEARYSNEPPPQKSAEGSANSISGGHY*
Ga0137376_104764272	3300012208	Vadose Zone Soil	MPFDDSCTLYCSRRFVIECPAPSTTIVLAMKNSIIFISALSLVAMMLASCNSVFAPDETATTGVTRQTNETPPPERTAEDSVNSISGGHY*
Ga0137376_108737092	3300012208	Vadose Zone Soil	MMMIRHDVINESYTLYGERRFVIECPAPSTTIFLAMKNSIIFISALSLVAMVLASCNSIPSAFAPDETAKTGVTSQTNETPPRRSAEDSVNSISGGHY*
Ga0137378_106087612	3300012210	Vadose Zone Soil	MNLQPVDTAADPIDESCTLYGARRFVIECPAPSTTIVLAMKNSIIFISALSLAAMMLASCNSVFAPDETATTGVTRQTNETPRQRSAEDSVNSISGGHY*
Ga0137370_104437211	3300012285	Vadose Zone Soil	MLYGERRFVIKCPAPSTTIFLAMKNSIIFISALSLVAMVLASCNSIPSAFAPDETARTGVTRQTNETPPERSAEDSVNSISGGHY*
Ga0137370_106118592	3300012285	Vadose Zone Soil	HDVINESYMLYDERRFVIKCPAPSTTNFLAMKNSIIFISALSLVAMMLASCNSIPSAFASDETARTGVTRQTNETPPERSAQDSVNSISGGHY*
Ga0137372_103046022	3300012350	Vadose Zone Soil	MADHPAIMSFDYSCTLYGARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSVFAPDETATTGVTRQTNETRPERSAQDSVNSISGGHY*
Ga0137384_104864791	3300012357	Vadose Zone Soil	MNLQPVDTAADPIDESCTLYGARRFVIECPAPSTTIFLAMKNSIIFISALSLVAIMLASCNSVFAPDETATTGVTRQTNETPRQRSAEDSVNSISGGHY*
Ga0137385_103215722	3300012359	Vadose Zone Soil	MNLQPVDTAPDLIDESCTLYGERRFVIECPAPSTTIVLAMKNSIIFISALSLVAMMLASCNSVFAPDETATTGVTRQTNETHHERSAEDSVNSISGGHY*
Ga0137360_109828471	3300012361	Vadose Zone Soil	MPFDDSCTLYCARRFVIECPAPSTTIVLAMKNSIIFISALSLVAMMLASCNSIPSAFAPDETARTGVTSQTNETPRERSAEDSVNSISGGHY*
Ga0137360_110683161	3300012361	Vadose Zone Soil	MSDLPTSIDESCTLYGARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSAFASDETATTGETWQTNETPPERSAEDSNSISGGHY*
Ga0137361_117873751	3300012362	Vadose Zone Soil	MNLQPVDTAPDLINDSCTLYGERRFVIECPAPSTTIVLAMKNSIIFISALSLVAMMLASCNSVFAPDETATTGVTRQTNETPRPERSAEDSVNSISGGHY*
Ga0137390_101732422	3300012363	Vadose Zone Soil	MAGCSGHDLIDDSCTLYGERRFVIECPAPSTTIVLAMKNSIIFMSALSLVAMMLASCNSVFAPDETATTGVTRQTNETPRERSAEDSVNSISGGHY*
Ga0137358_105815811	3300012582	Vadose Zone Soil	RMMMIRHDVINESHTLYGERRFVIECPAPLTTIFLAMKNSIIFISALSLVAMMLASCNSIPSAFASDETARTGVTRQTNETPPERSAQDSVNSISGGHY*
Ga0157303_102654291	3300012896	Soil	SVLDCRMAKRSGHDVIDESCTLYGSRRSVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSAFAPDETATTGVTRQTNETPPERSAEDSVNSISGGHY*
Ga0137395_101315061	3300012917	Vadose Zone Soil	MAGCSGHDLIDDSCTLYGERRFVIECPAPSTTIVLAMKNSIIFISALSLVAMMLASCNSIPSVFAPDETATTNVTRQTNETRPQRSAEDSVN
Ga0137359_115093282	3300012923	Vadose Zone Soil	MNLQPVSTAPDLIDESYTLYGALRFVIECPAPSTTIALAMKNSIIFISALSLVAMMLASCNSVFAPDETATTGVTRQTNETPRERSAEDSVNSISGGHY*
Ga0137413_100914502	3300012924	Vadose Zone Soil	MAADPAMNVINESYTLYGERRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSAFAPDETATTGVTRQTNATPPERSAQDSANSISGGHY*
Ga0137404_106980871	3300012929	Vadose Zone Soil	MMMIRHDVINESYTLYGERRFVIKCPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSAFAPDETAKTGVTSQTNETPPRRSAEDSVNSISGGHY*
Ga0164299_104115871	3300012958	Soil	MKTILDVDGWADARRLRIIAIPSTILQAYGARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSAFAPDETATTGATRQTNETPPERSADTGTISGGHY*
Ga0164301_108461181	3300012960	Soil	DSCTLYGARRFVIECPAPSTTVFLAMKNSIIFISALSLVAMMLASCKSVPSAFAPDETATTSETWHTNETPPEPSAEGSGNSISGGHY*
Ga0134110_101249321	3300012975	Grasslands Soil	KLVKTNCLRDSEVSRIEASIRFRDSQRFVIECPGPSTTIFLAMKNSIIFISALSLVAMMLASCNSVFAPDETATTGVMKQTNEAPHERSAEDSVNSISGGHY*
Ga0164307_105661612	3300012987	Soil	MKTILDVDGWADARRLRIIAIPSTILQAYGARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCDSLFAPDETATTHVAGHTNETPPEQNAEGHGNSISGGHY*
Ga0164305_113130602	3300012989	Soil	LIFSCYFVATFLHALRARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSAFAPDETAKTGVTSQTNETPHERSAEDSVNSISGGHY*
Ga0157378_126761182	3300013297	Miscanthus Rhizosphere	GHYVTNESYTLERARRFVIECPAPSTTILLAMKYSIIFISALSLVAMMLASCNSIPSAFAPDETATTGVTRQTNETPPQRSAEGSVNSISGGRY*
Ga0137414_10104692	3300015051	Vadose Zone Soil	LPDGDDPAMNVINESYTLYGERRFVIECPAPSTTIILAMKNSIIFISALSLVATMLASCSSILAPDETARTGVTRQSNEAPPERSAGDSVNSISGGHY*
Ga0134085_105615131	3300015359	Grasslands Soil	MPFDDSCTLYGARRFVIECPAPSTTIVLAMKNSIIFISALSLVAMMLASCNSVFAPDETATTGVTRQTNETRPERSAEDSVNSISGGHY*
Ga0132256_1037039152	3300015372	Arabidopsis Rhizosphere	LLDGRCFGHDVIDESYTLYGERRFVIECPAPSTTIFLAMKHSIILISALSLVAMLLASCSSVLAPDETATTGVTRQTDETYHERSAEDSVNSISGVHFQQDF
Ga0132257_1025333861	3300015373	Arabidopsis Rhizosphere	GARRFVIECPAPSTTIFLAMKHSIILISALSLVAMLLASCSSVLAPDETATTGVTRQTDETYHERSAEDSVNSISGGHY*
Ga0132255_1033649771	3300015374	Arabidopsis Rhizosphere	TGPLHRITQECELNGSTIDDSCTLCGERRFVIECPAPSTTILLAMKNSIIFISALSLVAMMLASCSSILAPDETATTGVTRQTNETAPQRSAEDSANSISG*
Ga0066667_102728812	3300018433	Grasslands Soil	MSQCSANVIDKSCALYGARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSVFAPDETATTGVTRQTNETPPERSAEDSVNSISGGHY
Ga0173482_106762631	3300019361	Soil	YGARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSAFAPDETATTGATRQTNETPLERSAEERNSITGGHY
Ga0193748_10180341	3300019865	Soil	DVINESYTLYGERRFVIECPAPSTTIILAMKNSIIFISVLSLVAMMLASCSSILAPDETARTGVTRQTNEAPPERSAGDSVNSISGGHY
Ga0193747_10698641	3300019885	Soil	HSTLYGARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSAFAPDETATTGETRQTNETRPERSAEDSVNSISGGHY
Ga0193727_10022888	3300019886	Soil	CTLYGARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSAFAPDETATTGVTRQTNETRPERSAEDSVNSISGGHY
Ga0193711_10067904	3300019997	Soil	VINESYTLYGERRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSAFAPDETATTGVTRQTNETPRERSAEDSVNSISGGHY
Ga0193732_10724742	3300020012	Soil	MSGHDVINESYTLYGERRFVIECPAPSTTIVLAMKNSIIFISALSLVAMMLASCSSILAPDETARTGVTRQTNEAPPERSAGDSVNSISGGHY
Ga0193696_10385672	3300020016	Soil	LPDGDDPAMNVINESYTLYGERRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIFAPDETARTGVTSQTNETRPERSAEDSVNSISGGHY
Ga0193724_10265483	3300020062	Soil	HDVINESYTLYGERRFVLECPAPSTTIFLAMKNSIIFISALSLVAMMLGSCNSVPSAFAPDETARTGVTSQTNETAPQRSAEDSVNSISGGHY
Ga0210406_101575035	3300021168	Soil	LEALSGFTARRFVIECPAPSTTIFLSMKNSLIFISALSLVAMMLASCNSILAPDETATTGEARYSNEPPPQKSAEGSANSISGGHY
Ga0210387_104682811	3300021405	Soil	MSYKIARCWVRLEALSGFTARRFVIECPAPSTTIFLSMKNSLIFISALSLVAMMLASCNSILAPDETATTGEARYSNEPPPQKSAEGSANSISGGHY
Ga0193695_10472271	3300021418	Soil	APDLIDQFYTLYASQRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSAFAPDETATTGVTRQTNETRPERSAEDSVNSISGGHN
Ga0247695_10389181	3300024179	Soil	FCMLYGSRRFVIECPAPSTTIFLAMKNSIIFISALSLIAMMLASCGSVLAPDETATTGVTSQTNEAAPERSGNSISGGQY
Ga0207685_100335831	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MICRAYIDESCTLYGARRFVIECPAPSTTVFLAMKNSIIFISALSLVAMMLASCKSVPSAFAPDETATTSETWHTNETPPEPSAEGSGNSISGGHY
Ga0207700_100134096	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LIAGRRMICRAYINDSCTLYGARRFVIECPAPSTTVFLAMKNSIIFISALSLVAMMLASCKSVPSAFAPDETATTSETWHTNETPPEPSAEGSGNSISGGHY
Ga0207701_104404821	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTRRLHINEPCMLYDPRRFVIECRSPSTTIFLAMKNSIIFISALSLAAMVLTSCNSVFAPDETATTHVTTHTNETPPERSAEDSANSISGGHY
Ga0209238_12383591	3300026301	Grasslands Soil	MSQCSANVIDKSCALYGARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSAFAPDETATTGATSKTNETPPRRSAEDSVNSISGGHH
Ga0209240_11172661	3300026304	Grasslands Soil	IDYSCTLYDSQRFVIECPAPSTTIVLAMKNSIIFISALSLVAMMLASCNSVFEPDETATTGARRQTNETPPKRSAEDSANSIGGGHY
Ga0209470_12029952	3300026324	Soil	MRLFRHLIDESCTLYSARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMVLASCNSIPSAFAPDETATTGATRQTNETRPERSAEDSVNSISGGHY
Ga0209267_13051772	3300026331	Soil	YGERRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSVFAPDETETTGVTRQTNETRPERSAQDSVNSISGGHY
Ga0209807_12307492	3300026530	Soil	KGRARTVFDGRIVRWSGHDVINESYTLYGERRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSAFAPDETATTGATRQTNETRPERSAENSVNSMSGGHH
Ga0209056_102686931	3300026538	Soil	MNQCSADLIDESCTLYGARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSVFAPDETATTGITRQTNETPPERSAEDSVNSISGGHY
Ga0209648_101801013	3300026551	Grasslands Soil	MICRAYIDESCTLYGARRCVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSAFARDETATTGETWQTNETPPERSAEDSGNSISGGHY
Ga0207637_10060792	3300027483	Soil	ASLTASAHAIDDSCKLYGARRFVIECPAPSTTIFLGMKNSFIFISALSLVAMMLASCSSIFAPDETATTGVTRQTNETPPERSAEDSVNSISGGHY
Ga0307305_104992671	3300028807	Soil	YTLYGVRRFVLECPAPSTTVFLAMKNSIIFISALSLVAMMLASCNSVPSAFAPDETARTGVTSQTNETPSRRSAEDSVNSISGGHY
Ga0307292_102782773	3300028811	Soil	RRSDFRCAAIDYSCTLYDSQRFVIECRAPSTTICLGMKNSIIFISALSLVAMMLVSCNSIPTAFAPDETATTGVTTQTNETRPERSAEDSVNSISGGHY
Ga0307286_103366962	3300028876	Soil	MSGHDVINESYTLYGARRFVIECPAPSTTIVLAMKNSIIFISALSLVAMMLASCNSVFAPDETTTTGVTRQTNETPPQRSAEDSVNSISGGHY
Ga0075382_116041112	3300030917	Soil	VYVFNDSCTLYGARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSAFAPDETATTGVTSQTNETPHERSAEDSVNSISGGHY
Ga0170824_1073830252	3300031231	Forest Soil	LPDGRSGHDVINESCPLYGERRFVLERPAPSTTIFLAMKNSIIFISALSLVAMMLASCSSTFAPDETATTGTGRYFNEPPPERSAEGSVSSMSGGHY
Ga0306921_123467591	3300031912	Soil	MALPQSAAPASQDRARIINDSWTLYGARRFVIECPPPSTTIFLAMKNSIIFISAFSLAAMVLASCNSIPSAFAPDETATTGVTRETNETPPERSAEGHGNSISGGHY
Ga0310913_111879181	3300031945	Soil	LYRARRFVIECPAPSTTILLAMKNSIIFISALSLVAMMLASCNSIPSAFAPDETATTGVASQTNETPHERSAEDSVNSISGGHY
Ga0307472_1003860101	3300032205	Hardwood Forest Soil	MICRAYIDESCTLYGARRFVIECPAPSTTIFLAMKNSIIFISALSLVAMMLASCNSIPSAFAPDETATTGVTGQTNETRPERSAEDSVNSISGGHY
Ga0306920_1036244652	3300032261	Soil	IDALQTLYCARRFVIECPAPSTTIFLAMKNSIIFISALSLVAIMLASCNSIPGAFAPDETATTHVTSQTNEAPPERSAEDSVNSISGGHY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084797

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences