Metagenome / Metatranscriptome Family F084756

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084756
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	45 residues
Representative Sequence	MNLELTDEQTEALIRELSQIIDGDRYPLSPRIVALKEILGQL
Number of Associated Samples	75
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	18.52 %
% of genes near scaffold ends (potentially truncated)	83.93 %
% of genes from short scaffolds (< 2000 bps)	89.29 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.607 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (42.857 % of family members)
Environment Ontology (ENVO)	Unclassified (52.679 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.393 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.43% β-sheet: 0.00% Coil/Unstructured: 58.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00892	EamA	2.68
PF04120	Iron_permease	2.68
PF13432	TPR_16	1.79
PF00589	Phage_integrase	1.79
PF10387	DUF2442	1.79
PF02515	CoA_transf_3	0.89
PF01370	Epimerase	0.89
PF12762	DDE_Tnp_IS1595	0.89
PF13229	Beta_helix	0.89
PF01547	SBP_bac_1	0.89
PF07589	PEP-CTERM	0.89
PF12773	DZR	0.89
PF13403	Hint_2	0.89
PF02666	PS_Dcarbxylase	0.89
PF13643	DUF4145	0.89
PF04191	PEMT	0.89
PF01609	DDE_Tnp_1	0.89
PF12680	SnoaL_2	0.89
PF00196	GerE	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0688	Phosphatidylserine decarboxylase	Lipid transport and metabolism [I]	0.89
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.89
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.89
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.89
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.89
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.89
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.89
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.61 %
All Organisms	root	All Organisms	38.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.61 %
cellular organisms	root	All Organisms → cellular organisms	38.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.61 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.39 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.57 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.89 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.89 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.43 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.89 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.89 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.89 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.61 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.36 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.68 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.68 %
unclassified Candidatus Omnitrophica	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica	0.89 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.36 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	1.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.79 %
Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_67_20	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_67_20	0.89 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.89 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.89 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.36 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	1.79 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.79 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	0.89 %
Acidisoma	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma	0.89 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.89 %
Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_67_20	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_67_20	0.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.36 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	1.79 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.89 %
unclassified Acidisoma	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → unclassified Acidisoma	0.89 %
Edaphobacter acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter acidisoli	0.89 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	0.89 %
Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_67_20	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_67_20	0.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.61 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.36 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	1.79 %
Acidisoma sp. L85	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → unclassified Acidisoma → Acidisoma sp. L85	0.89 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.89 %
Edaphobacter acidisoli	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter acidisoli	0.89 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	0.89 %
Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_67_20	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_67_20	0.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_103795572	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter acidisoli	567	Open in IMG/M
3300004633\|Ga0066395_10864884	Not Available	546	Open in IMG/M
3300004635\|Ga0062388_100096228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → unclassified Acidisoma → Acidisoma sp. L85	2107	Open in IMG/M
3300005569\|Ga0066705_10656325	Not Available	637	Open in IMG/M
3300005764\|Ga0066903_104068047	Not Available	783	Open in IMG/M
3300006163\|Ga0070715_10728614	Not Available	595	Open in IMG/M
3300006172\|Ga0075018_10758838	Not Available	529	Open in IMG/M
3300006175\|Ga0070712_100514716	Not Available	1005	Open in IMG/M
3300006755\|Ga0079222_12072007	Not Available	562	Open in IMG/M
3300010048\|Ga0126373_13256205	Not Available	505	Open in IMG/M
3300010359\|Ga0126376_10240083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1533	Open in IMG/M
3300010360\|Ga0126372_10424195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1223	Open in IMG/M
3300010360\|Ga0126372_12245744	Not Available	595	Open in IMG/M
3300010361\|Ga0126378_10148433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2384	Open in IMG/M
3300010376\|Ga0126381_100687442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1462	Open in IMG/M
3300010376\|Ga0126381_104397068	Not Available	545	Open in IMG/M
3300011120\|Ga0150983_13797149	Not Available	721	Open in IMG/M
3300011120\|Ga0150983_14161322	Not Available	510	Open in IMG/M
3300011120\|Ga0150983_14293415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300012096\|Ga0137389_11495730	Not Available	571	Open in IMG/M
3300012202\|Ga0137363_11584461	Not Available	547	Open in IMG/M
3300012918\|Ga0137396_10600088	Not Available	814	Open in IMG/M
3300012923\|Ga0137359_11173704	Not Available	655	Open in IMG/M
3300012927\|Ga0137416_10533365	Not Available	1015	Open in IMG/M
3300012961\|Ga0164302_10889306	Not Available	682	Open in IMG/M
3300012986\|Ga0164304_10449314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	929	Open in IMG/M
3300016294\|Ga0182041_12343266	Not Available	500	Open in IMG/M
3300016319\|Ga0182033_10432777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1118	Open in IMG/M
3300016341\|Ga0182035_10118016	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Omnitrophica WOR_2 bacterium RIFCSPHIGHO2_02_FULL_67_20	1979	Open in IMG/M
3300016341\|Ga0182035_10530900	Not Available	1009	Open in IMG/M
3300016341\|Ga0182035_10626913	Not Available	931	Open in IMG/M
3300016341\|Ga0182035_11647276	Not Available	579	Open in IMG/M
3300016357\|Ga0182032_10202573	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	1511	Open in IMG/M
3300016387\|Ga0182040_10019783	All Organisms → cellular organisms → Bacteria → Proteobacteria	3710	Open in IMG/M
3300016387\|Ga0182040_10176670	Not Available	1548	Open in IMG/M
3300016387\|Ga0182040_10295639	All Organisms → cellular organisms → Bacteria → Proteobacteria	1236	Open in IMG/M
3300016387\|Ga0182040_11075650	Not Available	673	Open in IMG/M
3300016387\|Ga0182040_11952494	Not Available	504	Open in IMG/M
3300016422\|Ga0182039_10465934	Not Available	1085	Open in IMG/M
3300016422\|Ga0182039_12267191	Not Available	501	Open in IMG/M
3300016445\|Ga0182038_11992939	Not Available	526	Open in IMG/M
3300020580\|Ga0210403_10791180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	754	Open in IMG/M
3300020580\|Ga0210403_10950953	Not Available	675	Open in IMG/M
3300020581\|Ga0210399_10662657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	860	Open in IMG/M
3300020581\|Ga0210399_11563887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300020583\|Ga0210401_10817796	Not Available	791	Open in IMG/M
3300021171\|Ga0210405_10640332	Not Available	825	Open in IMG/M
3300021171\|Ga0210405_11094020	Not Available	596	Open in IMG/M
3300021178\|Ga0210408_10690328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	804	Open in IMG/M
3300021178\|Ga0210408_10723589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	783	Open in IMG/M
3300021401\|Ga0210393_10155558	All Organisms → cellular organisms → Bacteria → Proteobacteria	1839	Open in IMG/M
3300021401\|Ga0210393_11091192	Not Available	645	Open in IMG/M
3300021404\|Ga0210389_10839407	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300021405\|Ga0210387_10482581	Not Available	1101	Open in IMG/M
3300021405\|Ga0210387_10917208	Not Available	770	Open in IMG/M
3300021420\|Ga0210394_11713302	Not Available	526	Open in IMG/M
3300021479\|Ga0210410_10707632	Not Available	889	Open in IMG/M
3300021479\|Ga0210410_11687345	Not Available	527	Open in IMG/M
3300021560\|Ga0126371_12252812	Not Available	658	Open in IMG/M
3300022718\|Ga0242675_1111738	Not Available	537	Open in IMG/M
3300024288\|Ga0179589_10395776	Not Available	633	Open in IMG/M
3300025906\|Ga0207699_10262261	Not Available	1195	Open in IMG/M
3300027537\|Ga0209419_1099305	Not Available	579	Open in IMG/M
3300027703\|Ga0207862_1083472	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300028047\|Ga0209526_10389032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	928	Open in IMG/M
3300030981\|Ga0102770_11195568	Not Available	555	Open in IMG/M
3300031668\|Ga0318542_10555961	Not Available	598	Open in IMG/M
3300031681\|Ga0318572_10985868	Not Available	500	Open in IMG/M
3300031682\|Ga0318560_10355319	Not Available	792	Open in IMG/M
3300031682\|Ga0318560_10447620	Not Available	699	Open in IMG/M
3300031719\|Ga0306917_10044820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2942	Open in IMG/M
3300031719\|Ga0306917_10050661	Not Available	2792	Open in IMG/M
3300031719\|Ga0306917_11508434	Not Available	517	Open in IMG/M
3300031744\|Ga0306918_11154039	Not Available	599	Open in IMG/M
3300031744\|Ga0306918_11435263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	528	Open in IMG/M
3300031747\|Ga0318502_10123682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1455	Open in IMG/M
3300031753\|Ga0307477_11137170	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300031768\|Ga0318509_10018488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3211	Open in IMG/M
3300031768\|Ga0318509_10208499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1088	Open in IMG/M
3300031771\|Ga0318546_10634371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	752	Open in IMG/M
3300031771\|Ga0318546_11238434	All Organisms → cellular organisms → Bacteria → Proteobacteria	524	Open in IMG/M
3300031792\|Ga0318529_10293740	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300031792\|Ga0318529_10397163	Not Available	642	Open in IMG/M
3300031797\|Ga0318550_10466027	Not Available	610	Open in IMG/M
3300031797\|Ga0318550_10471883	Not Available	606	Open in IMG/M
3300031798\|Ga0318523_10688089	Not Available	502	Open in IMG/M
3300031819\|Ga0318568_10341221	Not Available	932	Open in IMG/M
3300031833\|Ga0310917_10343182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1013	Open in IMG/M
3300031879\|Ga0306919_10649810	Not Available	813	Open in IMG/M
3300031890\|Ga0306925_10767052	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300031897\|Ga0318520_10070405	Not Available	1895	Open in IMG/M
3300031910\|Ga0306923_10527321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1333	Open in IMG/M
3300031946\|Ga0310910_10415083	Not Available	1067	Open in IMG/M
3300031954\|Ga0306926_11353071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	829	Open in IMG/M
3300031959\|Ga0318530_10112932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1087	Open in IMG/M
3300032001\|Ga0306922_10824425	All Organisms → cellular organisms → Bacteria → Proteobacteria	968	Open in IMG/M
3300032001\|Ga0306922_11995327	Not Available	565	Open in IMG/M
3300032035\|Ga0310911_10840653	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300032059\|Ga0318533_10227906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1341	Open in IMG/M
3300032059\|Ga0318533_10620838	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300032060\|Ga0318505_10330181	Not Available	720	Open in IMG/M
3300032060\|Ga0318505_10559268	Not Available	538	Open in IMG/M
3300032261\|Ga0306920_100190976	All Organisms → cellular organisms → Bacteria → Proteobacteria	3057	Open in IMG/M
3300032261\|Ga0306920_100210371	All Organisms → cellular organisms → Bacteria	2902	Open in IMG/M
3300032261\|Ga0306920_101298780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1047	Open in IMG/M
3300032261\|Ga0306920_101498685	Not Available	963	Open in IMG/M
3300033289\|Ga0310914_10913588	Not Available	777	Open in IMG/M
3300033290\|Ga0318519_10585437	Not Available	677	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.32%
Aquatic	Environmental → Aquatic	2.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.32%
Freshwater	Environmental → Aquatic → Freshwater	1.79%
Sediment	Environmental → Aquatic → Sediment	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.50%
Loam	Environmental → Terrestrial → Soil → Loam	9.82%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	70.54%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	42.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.04%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030981	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 4C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1037955721	3300004092	Bog Forest Soil	MNLGLNDVQTEVLVRELSQIIQNDRYPLSSRIRVLKEILAKLRPEPAR
Ga0066395_108648841	3300004633	Tropical Forest Soil	MNLELNDVQAEVLIRELHSIIQNDRYPLSPRIVALREILGKLRPEPARAG
Ga0062388_1000962283	3300004635	Bog Forest Soil	MNLELTDEQTEALIRELSLIIENDRYPLSPRIRVLKAIRA
Ga0066705_106563251	3300005569	Soil	LTPTDEQTEVLIRELSQIIENDRYPSPRIVTLKEI
Ga0066903_1040680471	3300005764	Tropical Forest Soil	MDLKLTDEQAAALTRELNNIVQNDRYPLSPRIVTLKEIL
Ga0070715_107286142	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	TDEQTEALTRELSQIIDRDRYPLSPRIVALKEILGKRRP*
Ga0075018_107588381	3300006172	Watersheds	MTHLELTDEQTEALVRGLSQIIDGDRYPLSPRIVALKEILGMMRPEPA
Ga0070712_1005147162	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MDFELTDEQTEALIRELSKIIDGDRYPLSPRIVPMKEIRGMLRSEPSHEPLPAGGR*
Ga0079222_120720072	3300006755	Agricultural Soil	MNLELTDEQTEALIRELSQIIDGDRYPLSPRIVALKEILGQL
Ga0126373_119050202	3300010048	Tropical Forest Soil	MQLELTDEQAAALLAALSRLIDNDRYPLSPRIRIA
Ga0126373_132562051	3300010048	Tropical Forest Soil	MNLELNDVQAEVLIRELHSIIQNDRYPLSPRIVALREILGKLRPEPARAAAAAPPP
Ga0126376_102400832	3300010359	Tropical Forest Soil	MHLELNDEQAEALIRELHNIIQNDRYFLSPRVRVLKEILGKLR
Ga0126372_104241953	3300010360	Tropical Forest Soil	MDLKLTDEQTDALICDLRNTIQNDRYPLSPRIVTL
Ga0126372_122457442	3300010360	Tropical Forest Soil	MHLDLNDEQTELLIRELSQLIADDRYFLGHRARVLKEILGKLRPE
Ga0126378_101484335	3300010361	Tropical Forest Soil	MDLKLTEEQAAALVRELNNIVQNDRYPLSPRIVT*
Ga0126381_1006874422	3300010376	Tropical Forest Soil	MTMNLELNDLQAEVPIRELDHIVRNDRYPLSPRIVALREILGLLRPEPTRAAA
Ga0126381_1043970681	3300010376	Tropical Forest Soil	MNLEHEQAAALVRELNNIVQNDRYPLSPRIVTLKEILEQ
Ga0150983_137971491	3300011120	Forest Soil	MHLELTDEQTEALTRELSQIIQNDRYPLSPRIRVLKDILGQLRP
Ga0150983_141613222	3300011120	Forest Soil	MHLELTDEQTEALIRELSQLIDGDRYPLSPRIRVLKEIFGMMRPEPARPAPLPL
Ga0150983_142934152	3300011120	Forest Soil	MNLELTDEQSEALIRELGQIVRNDRYFLSPRVRVLRDILGKLRPEPA
Ga0137389_114957302	3300012096	Vadose Zone Soil	MNLELSDVQAEALSRELSHLIENDRYPLSPRIVALKEILGMLR
Ga0137363_115844612	3300012202	Vadose Zone Soil	MHLELTDAQTEALMRELSKIIDGDRYPLSPRIGVLKGILGQLRPEAEREPLPARR
Ga0137396_106000881	3300012918	Vadose Zone Soil	MHLELTDEQTEALIRELSQTIDGDRYPLSPRIRVLKEILGM
Ga0137359_111737042	3300012923	Vadose Zone Soil	MHLELTDAQTEALMRELSKIIDGDRYPLSPRIRVL
Ga0137416_105333651	3300012927	Vadose Zone Soil	MHLELTDEQTEALIRELSQLIDGHRYPLSPRMRELKEILGM
Ga0164302_108893062	3300012961	Soil	VHLELTDEQTEALTRELSLIVQSDRYPLSPRIVAL
Ga0164304_104493141	3300012986	Soil	MNLELTEEQTEALIRELGQIVRNDRYFLSPRVRVLRDILGKLRPEPAR
Ga0182041_123432661	3300016294	Soil	MNLELNEVQADVLTRELHSIIQNDRHPLSPRIVTLKEILGQLRPQPER
Ga0182033_104327771	3300016319	Soil	MNLELNDAQAEVLTRELHCIIQHDRYPLSPRIVALKEILSRLRPAPARPRAPTVPF
Ga0182035_101180161	3300016341	Soil	MNLDLNDQQTEALIRELGSIIQNDRYPLSPRIVAL
Ga0182035_105309004	3300016341	Soil	MNLELSDVQAEVLIRELHSIIQNDRYPLSPRVVALKEILGQLQPEP
Ga0182035_106269131	3300016341	Soil	MNLDMNDVQTGVLIRELHGIIQSDRYPLSPRIVALKEILGQLRPEPARTPAP
Ga0182035_116472761	3300016341	Soil	MDLELNDVQTEALIRELDRIVRNDRYPLSPRIVALKEILGQLRPEPERAPAPS
Ga0182032_102025731	3300016357	Soil	MNLELNDLQTDVLIRELGSIIQNDRYPLSPRIVALKEILG
Ga0182040_100197835	3300016387	Soil	MNLDLNDVQTEALIRELSHLIQNDRYPFSPRIVTLKEILGQLRPETKREPLAPRR
Ga0182040_101766701	3300016387	Soil	MHLELTDEQTAALVRELSQIVQNDRYPLSPRIVALKGILGMLRPERAPRAPAP
Ga0182040_102956391	3300016387	Soil	MHLELNDAQTEALICELHNIVQNDRYPLSPRIVALKEILGMMRPEPPRAAVAAPSPGIYA
Ga0182040_110756501	3300016387	Soil	MNLELNDVQTEVLTRELHSIIQNDRYPLSPRIVALKEIPGQLR
Ga0182040_119524942	3300016387	Soil	MTNLELTDEQTEALIRELSPIIDGDRYPLSPRIVPLKEILTMMRPEPEREPL
Ga0182039_104659343	3300016422	Soil	MHLELTDEQTAALVRELSQIVPNDRYPLSPRIVALKGD
Ga0182039_122671912	3300016422	Soil	MHLELTDEQAAALVRELSQIVPNDRYPLSPRIVALKGD
Ga0182038_119929391	3300016445	Soil	MHLELTDEQAQALIQGLRKLIDGDRHPLSPRILALKE
Ga0210403_107911802	3300020580	Soil	MNLELTDEQSEALIRELGQIVRNDRYFLSPRVRVFRDILGKL
Ga0210403_109509531	3300020580	Soil	MNLELTDEQTEALIREISQIIDGDRYPLSPRIVALKEILGMMRPEP
Ga0210399_106626571	3300020581	Soil	MNLELTDEQTEALIREISQIIDGDRYPLSPRIVAL
Ga0210399_115638873	3300020581	Soil	LELNDMQTEVLIRELSSIVQNDRYPLSPRIRVLKEILGMMRPEPARPAPLPPLRN
Ga0210401_108177961	3300020583	Soil	MNLELTDEQTEALIRELSLIIDGDRYPFSPRIRVLKEILGCWG
Ga0210405_106403322	3300021171	Soil	MHLDLTDAQTEALMRELSKIIDGDRYPLSPRIRVLKEILGMLRP
Ga0210405_110940201	3300021171	Soil	MNLELTDEQAEALIRELSLIIEYGRYRLSPHIRALKEILGMLRPEPA
Ga0210408_106903281	3300021178	Soil	MNLELTDEQSEALIRELGQIVRNDRYFLSPRVRVLRDILGKLRPEPARPTAAPLRNYE
Ga0210408_107235891	3300021178	Soil	MNLELTQVQTEALIRELSQIVQNDRYPLSPRIVALKEILGQLRPEAARPAP
Ga0210393_101555582	3300021401	Soil	MNLELTDEQTEALIRELGQIVRNDRYFLSPRVRVLRDILGKLRPGPARPTAAPLRN
Ga0210393_110911922	3300021401	Soil	MHLELTDEQTEALIRELSLIIEYDRYRLSLHIIRALKEILGQLRPEPARPAPLPP
Ga0210389_108394071	3300021404	Soil	MHLELNDVQTEASIRELSRTIENDRYPLSPRIVTLKEILTKLRPEPAR
Ga0210387_104825811	3300021405	Soil	MHLELTDEQTEALTRELSQIIQNDRYPLSPRIRVLKDILGSY
Ga0210387_109172082	3300021405	Soil	MTHLELTDEKTEALTRELSQIIENDRYPLSPRIVALKEILGQLRPEPA
Ga0210394_117133022	3300021420	Soil	MHLELTDEQTEAPIRELSLIIDGDRHPLSPRIVVLKEIVGMLRPEPVREPLPPRRWRA
Ga0210410_107076322	3300021479	Soil	LLWIAYIRGMDFELTDEQTEALIRELSKIIDGDRYPLSPRIVPMKEIRGMLRSEPSHEPLPAGGR
Ga0210410_116873451	3300021479	Soil	MTHLELTDEKTEALTRELSQIIENDRYPLSPRIVALKEILGQL
Ga0126371_122528123	3300021560	Tropical Forest Soil	MNLELNDVQAAVLTRELHSIIQNDRYPLSPRIVALKEVLGQLRPE
Ga0242675_11117381	3300022718	Soil	MNLELTDEPSEAFIRELSQIIEYDRYPLSPRNVALKEVLG
Ga0179589_103957762	3300024288	Vadose Zone Soil	MHLELTDEQTEALMRELSKIIDGDRYPLSPRIRVLKEILGM
Ga0207699_102622612	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTHLELTDEQTEALIRELSQIIDNDRYPLSLRIVALKEISWKRRP
Ga0209419_10993051	3300027537	Forest Soil	MHLDLTDAQTEALMRELSKIIDGDRYPLSPRIRVLKEILGMLRPEPVREPLPP
Ga0207862_10834721	3300027703	Tropical Forest Soil	MYLELNDVQAEVLTRELHSIIQNDRYPFSPRIVALKE
Ga0209526_103890323	3300028047	Forest Soil	MNLELNDMKAEALARELSHLIENDRYPLSPRIVALKEILGMLRPEPARP
Ga0102770_111955683	3300030981	Soil	MHLELTDEQTEALIRELSQIVQNDRYPLSPRIVALRGILGQLRPE
Ga0318542_105559611	3300031668	Soil	MNLELTDEQKEALIRELSPIIDGDRYPFSPRIRVLKEVLGQLQ
Ga0318572_109858681	3300031681	Soil	MNLVLKDVQAAVLTRELHTIIQNDRYPLSPRIVALRRSWG
Ga0318560_103553192	3300031682	Soil	MNLELNDLQTEALMRELSNIVQNDRYPFSPRIVVLKEVLGVLRPEPEREPLPARRH
Ga0318560_104476201	3300031682	Soil	MTHLELNDMQTEVLIRELSSIVQNDRYPLSPRIRVLKEILGMMRPE
Ga0306917_100448201	3300031719	Soil	MNLELTDEQTEALIRELPQIIDGDRYPLSPRIVALKEILGQLRPEPVREP
Ga0306917_100506615	3300031719	Soil	MTHLELNDMQTEVLIRELSSIVQNDRYPLSPRIRVLKEILGMMRPEPAR
Ga0306917_115084341	3300031719	Soil	MDLELNDVQTEALIRELDRIVRNDRYPLSPRIVALKEILGQLRPE
Ga0306918_111540391	3300031744	Soil	MNLELNDAQAEVLTRELHCIIQHDRYPLSPRIVALKEILSRLRPAPARPRAPTVPFRGTE
Ga0306918_114352631	3300031744	Soil	MNLELTDEQTEALIRELPQIIDGDRYPLSPRIVALKEILGQLRPEP
Ga0318502_101236822	3300031747	Soil	MNLELNDVQIEALLRELSQDRAERSLPLSPRIVALKEN
Ga0307477_111371701	3300031753	Hardwood Forest Soil	MHLELNDVQTEASIRELSRTIENDRYPLSPRIVTLK
Ga0318509_100184881	3300031768	Soil	MNLDLNDVQTEALIRELSHLIQNDRYPFSPRIVTLKE
Ga0318509_102084994	3300031768	Soil	MNLELTDEQTEALIRELPQIIDGDRYPLSPRIVALKEILGQLRPEPV
Ga0318546_106343713	3300031771	Soil	MNLELTDEQTEALIRELPQIIDGDRYPLSPRIVALKEILGQLRPEPVR
Ga0318546_111247081	3300031771	Soil	MAIGMTDEETGALIRELNEIVWSDPFSPRIVALKEILGQLR
Ga0318546_112384342	3300031771	Soil	MHLELNDAQTEALICELHNIVQNDRYPLSPRIVALKE
Ga0318529_102937402	3300031792	Soil	MYLELNDVQAEVLTRELHSIIQNDRYPFSPRIVALK
Ga0318529_103971633	3300031792	Soil	MNLELNDVQTEVLTRELHSIIQNDRYPLSPRIVALKEIPGQLRPEPIREPLPR
Ga0318550_104660271	3300031797	Soil	MTHLELNDMQTEVLIRELSSIVQNDRYPLSPRIRVLKEILGMMRP
Ga0318550_104718832	3300031797	Soil	MYLELNDVQAEVLTRELHSIIQNDRYPLSPRIVALKEIPGQLRPEPIREPL
Ga0318550_105249441	3300031797	Soil	MAIGMTDEETGALIRELNEIVWSDPFSPRIVALKEILGQLRP
Ga0318523_106880891	3300031798	Soil	MHLELTDEQTAALVRELSQIVQNDRYPLSPRIVALKEILGMLRPEPARPAPL
Ga0318568_103412212	3300031819	Soil	MTHLELNDMQTEVLIRELSSIVQNDRYPLSPRIRVLKEILGMMRPEPA
Ga0310917_103431821	3300031833	Soil	MNLELTDEQTEALIRELPQIIDGDRYPLSPRIVALK
Ga0306919_106498102	3300031879	Soil	MSLDLTDEQTALLEKELSRIIQNDRYPLSPRIVALRRSWG
Ga0306925_107670521	3300031890	Soil	MNLALNDLQTEVLTRELHNIIQNDRYPLSPRILALKEMLGML
Ga0318520_100704052	3300031897	Soil	VNLELTNEQSEALIRLLSRSIDGDRYPLSARIGVLKE
Ga0306923_105273214	3300031910	Soil	MNLELTDEQTEALIRELPQIIDGDRYPLSPRIVALKEILGQ
Ga0310910_104150831	3300031946	Soil	MPLELTDEQTEALIRELSQIIDGDRYPLSPRIVALREILGMLR
Ga0306926_113530712	3300031954	Soil	MNLDLSDAQIEVLIRELGNIIQTDRYPLSPRIVVLKEILGMMRPEPEREPLS
Ga0318530_101129321	3300031959	Soil	MTHLELNDMQTEVLIRELSSIVQNDRYPLSPRIRVLKEILGMMRPEPARPAPLPPLRN
Ga0306922_108244253	3300032001	Soil	MHLELNDAQTEALVRELSNIAQNDRYPLSPRIVALKEILGMLRPEPERE
Ga0306922_119953271	3300032001	Soil	MDLELNDVQTEALIRELDRIVRNDRYPLSPRIVALKEILGQ
Ga0310911_108406531	3300032035	Soil	MNLELTDEQTEALIRELSPIIDGDRYPLSPRIVPLKEIL
Ga0318533_102279063	3300032059	Soil	MNLELNDAQAEALIRELHSIVQADRYPLSPRIEALKEILGRLRPEPERAPA
Ga0318533_106208382	3300032059	Soil	MNLALNDLQTEVLTRELHIIIPNDRYPLSPRIVVI
Ga0318505_100410384	3300032060	Soil	MNLELTDEETGALIRELTQIVQNDRYPLSPRIVALKEILA
Ga0318505_103301812	3300032060	Soil	MTHLELNDMQTEVLIRELSSIVQNDRYPLSPRIRVLKEILGMM
Ga0318505_105592681	3300032060	Soil	MNLELNDLQTEALMRELSNIVQNDRYPFSPRIVALKEILAMMRPEPEREPLPPRRH
Ga0306920_1001909766	3300032261	Soil	MNLDLNDVQTEVLIRELGSIIQNDRYPLSPRIMTLREILGMMCPEP
Ga0306920_1002103717	3300032261	Soil	VCSPLLWIAYIRGMNLELTDEQTEALIRELSQIIDSDRYPLSPRIVALKEILGQLRPEPERVSWRT
Ga0306920_1012987801	3300032261	Soil	MTLDLTDEQTEALARLLSAAIDGDRYPLSPRIRTLQEILD
Ga0306920_1014986851	3300032261	Soil	MNLDLNDVKTEVLIRELGSIVQNDRYPFSSRIVILRERSFVSP
Ga0310914_109135881	3300033289	Soil	MNLELNDEQTEALIRLLSRTIDDDRYPLSARIGVLKEILGKLRPEPA
Ga0318519_105854372	3300033290	Soil	MNLELTDEQTEALIRELSQIIDSDRYPLSPRIVALKEILGQLRPEPERVSWRT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084756

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences