Metagenome Family F084747

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084747
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	113 residues
Representative Sequence	FQVAGFGPFHAPGASDMILRNANSGEFEVYDIVNNQITTANSLGAVGLDFQVGGFAADPPTLSGTFTDISNDQLVQAMAGFGGDAADDSNSVFLGDDTSQQPLLTTPQQA
Number of Associated Samples	85
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.57 %
% of genes near scaffold ends (potentially truncated)	91.96 %
% of genes from short scaffolds (< 2000 bps)	94.64 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (82.143 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (20.536 % of family members)
Environment Ontology (ENVO)	Unclassified (29.464 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.464 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.35% β-sheet: 14.49% Coil/Unstructured: 81.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF04545	Sigma70_r4	2.68
PF04392	ABC_sub_bind	1.79
PF03401	TctC	0.89
PF03412	Peptidase_C39	0.89
PF00881	Nitroreductase	0.89
PF01494	FAD_binding_3	0.89
PF12951	PATR	0.89
PF12071	DUF3551	0.89
PF00034	Cytochrom_C	0.89
PF13483	Lactamase_B_3	0.89
PF01345	DUF11	0.89
PF02518	HATPase_c	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.79
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.79
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.89
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.89
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.89
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.14 %
Unclassified	root	N/A	17.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.14 %
Unclassified	root	N/A	17.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.14 %
Unclassified	root	N/A	17.86 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	66.07 %
Unclassified	root	N/A	17.86 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	6.25 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	2.68 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.79 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	63.39 %
Unclassified	root	N/A	17.86 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	6.25 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.79 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	52.68 %
Unclassified	root	N/A	17.86 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.04 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	6.25 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.68 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	1.79 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	51.79 %
Unclassified	root	N/A	17.86 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	6.25 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	3.57 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.68 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.79 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.79 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.89 %
Gloeobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria	0.89 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	51.79 %
Unclassified	root	N/A	17.86 %
Candidatus Magnetobacterium	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium	6.25 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	3.57 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.68 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.79 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.79 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	0.89 %
Gloeobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales	0.89 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	51.79 %
Unclassified	root	N/A	17.86 %
Candidatus Magnetobacterium casensis	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	6.25 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	3.57 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.68 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.79 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.79 %
unclassified Methylocystis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis	0.89 %
Gloeobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae	0.89 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	51.79 %
Unclassified	root	N/A	17.86 %
Candidatus Magnetobacterium casensis	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	6.25 %
Methylobacterium sp. WSM2598	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. WSM2598	3.57 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.68 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.79 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.79 %
Methylocystis sp. B8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. B8	0.89 %
Gloeobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae → Gloeobacter	0.89 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	51.79 %
Unclassified	root	N/A	17.86 %
Candidatus Magnetobacterium casensis	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	6.25 %
Methylobacterium sp. WSM2598	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. WSM2598	3.57 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2.68 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.79 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1.79 %
Gloeobacter violaceus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae → Gloeobacter → Gloeobacter violaceus	0.89 %
Methylocystis sp. B8	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. B8	0.89 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_104709049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	635	Open in IMG/M
3300004479\|Ga0062595_102300869	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	531	Open in IMG/M
3300005172\|Ga0066683_10046533	All Organisms → cellular organisms → Bacteria → Proteobacteria	2549	Open in IMG/M
3300005181\|Ga0066678_11138032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. WSM2598	501	Open in IMG/M
3300005186\|Ga0066676_11138869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300005332\|Ga0066388_100441069	All Organisms → cellular organisms → Bacteria	1944	Open in IMG/M
3300005332\|Ga0066388_107754862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M
3300005406\|Ga0070703_10456775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. WSM2598	567	Open in IMG/M
3300005434\|Ga0070709_10484524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	937	Open in IMG/M
3300005434\|Ga0070709_11717539	Not Available	513	Open in IMG/M
3300005436\|Ga0070713_101384121	Not Available	682	Open in IMG/M
3300005436\|Ga0070713_101863550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Gloeobacteria → Gloeobacterales → Gloeobacteraceae → Gloeobacter → Gloeobacter violaceus	584	Open in IMG/M
3300005439\|Ga0070711_101842677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. WSM2598	531	Open in IMG/M
3300005440\|Ga0070705_101738683	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	528	Open in IMG/M
3300005445\|Ga0070708_101232378	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	699	Open in IMG/M
3300005454\|Ga0066687_10277056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	944	Open in IMG/M
3300005454\|Ga0066687_10897667	Not Available	528	Open in IMG/M
3300005467\|Ga0070706_100483022	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	1153	Open in IMG/M
3300005471\|Ga0070698_101769988	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	570	Open in IMG/M
3300005518\|Ga0070699_101302004	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	666	Open in IMG/M
3300005552\|Ga0066701_10767244	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300005554\|Ga0066661_10570170	Not Available	675	Open in IMG/M
3300005555\|Ga0066692_10617618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	679	Open in IMG/M
3300005557\|Ga0066704_10580740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	724	Open in IMG/M
3300005559\|Ga0066700_10460448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	892	Open in IMG/M
3300005578\|Ga0068854_101296805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	655	Open in IMG/M
3300005713\|Ga0066905_100402142	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300005713\|Ga0066905_100647344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	900	Open in IMG/M
3300005713\|Ga0066905_101231062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	670	Open in IMG/M
3300005764\|Ga0066903_100187267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3066	Open in IMG/M
3300005764\|Ga0066903_100281417	All Organisms → cellular organisms → Bacteria	2608	Open in IMG/M
3300005764\|Ga0066903_101781353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1176	Open in IMG/M
3300005764\|Ga0066903_103808157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	811	Open in IMG/M
3300005764\|Ga0066903_104287662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	762	Open in IMG/M
3300005764\|Ga0066903_106340233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617	Open in IMG/M
3300005764\|Ga0066903_107745402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553	Open in IMG/M
3300006038\|Ga0075365_10270921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1194	Open in IMG/M
3300006163\|Ga0070715_10990278	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	523	Open in IMG/M
3300006175\|Ga0070712_101155452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	673	Open in IMG/M
3300006175\|Ga0070712_101376089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	615	Open in IMG/M
3300006755\|Ga0079222_11367886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	652	Open in IMG/M
3300006796\|Ga0066665_11027717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	630	Open in IMG/M
3300006852\|Ga0075433_10478888	Not Available	1096	Open in IMG/M
3300006854\|Ga0075425_100075932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3793	Open in IMG/M
3300006954\|Ga0079219_10504306	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300007265\|Ga0099794_10680817	Not Available	547	Open in IMG/M
3300009100\|Ga0075418_10784389	Not Available	1029	Open in IMG/M
3300009156\|Ga0111538_12286857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	679	Open in IMG/M
3300009162\|Ga0075423_10332676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1592	Open in IMG/M
3300010046\|Ga0126384_11568035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300010046\|Ga0126384_12502226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300010358\|Ga0126370_11114370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	728	Open in IMG/M
3300010358\|Ga0126370_11975178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	569	Open in IMG/M
3300010361\|Ga0126378_10856167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1017	Open in IMG/M
3300010398\|Ga0126383_10734873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1067	Open in IMG/M
3300010398\|Ga0126383_12331750	Not Available	621	Open in IMG/M
3300010401\|Ga0134121_12553915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554	Open in IMG/M
3300010863\|Ga0124850_1134131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. WSM2598	601	Open in IMG/M
3300012189\|Ga0137388_11383906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	643	Open in IMG/M
3300012208\|Ga0137376_10989306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	720	Open in IMG/M
3300012361\|Ga0137360_11176543	Not Available	663	Open in IMG/M
3300012361\|Ga0137360_11225377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	649	Open in IMG/M
3300012362\|Ga0137361_10260554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → unclassified Methylocystis → Methylocystis sp. B8	1581	Open in IMG/M
3300012958\|Ga0164299_10310198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	974	Open in IMG/M
3300012971\|Ga0126369_11474430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	770	Open in IMG/M
3300012971\|Ga0126369_11505653	Not Available	763	Open in IMG/M
3300012971\|Ga0126369_11505870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	763	Open in IMG/M
3300012986\|Ga0164304_10712354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	764	Open in IMG/M
3300012986\|Ga0164304_11477600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300016319\|Ga0182033_12039070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300016341\|Ga0182035_10101114	Not Available	2112	Open in IMG/M
3300016341\|Ga0182035_11118897	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	701	Open in IMG/M
3300016357\|Ga0182032_10248550	Not Available	1381	Open in IMG/M
3300018431\|Ga0066655_10387010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	921	Open in IMG/M
3300018431\|Ga0066655_11029007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	571	Open in IMG/M
3300018433\|Ga0066667_11068324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	698	Open in IMG/M
3300020579\|Ga0210407_10424160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1041	Open in IMG/M
3300021178\|Ga0210408_10768503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	756	Open in IMG/M
3300021403\|Ga0210397_10905385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	683	Open in IMG/M
3300021479\|Ga0210410_10815042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	819	Open in IMG/M
3300021560\|Ga0126371_13614144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300025898\|Ga0207692_10361473	Not Available	897	Open in IMG/M
3300025905\|Ga0207685_10202936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	933	Open in IMG/M
3300025915\|Ga0207693_10151568	All Organisms → cellular organisms → Bacteria	1824	Open in IMG/M
3300025915\|Ga0207693_11186000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	576	Open in IMG/M
3300025922\|Ga0207646_11859952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300025928\|Ga0207700_11185278	Not Available	682	Open in IMG/M
3300025928\|Ga0207700_11473398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300025928\|Ga0207700_11969920	Not Available	511	Open in IMG/M
3300025929\|Ga0207664_10740524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	884	Open in IMG/M
3300025939\|Ga0207665_11630268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300026118\|Ga0207675_101850575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	622	Open in IMG/M
3300026552\|Ga0209577_10087473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2550	Open in IMG/M
3300026552\|Ga0209577_10553529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	730	Open in IMG/M
3300027874\|Ga0209465_10399369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	688	Open in IMG/M
3300027882\|Ga0209590_10353891	Not Available	946	Open in IMG/M
3300028720\|Ga0307317_10169377	Not Available	735	Open in IMG/M
3300028768\|Ga0307280_10337964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	554	Open in IMG/M
3300028784\|Ga0307282_10062815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1677	Open in IMG/M
3300028824\|Ga0307310_10109762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1236	Open in IMG/M
3300031546\|Ga0318538_10093746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1541	Open in IMG/M
3300031640\|Ga0318555_10089094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1615	Open in IMG/M
3300031736\|Ga0318501_10392663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	749	Open in IMG/M
3300031771\|Ga0318546_10202539	Not Available	1356	Open in IMG/M
3300031771\|Ga0318546_10868001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	635	Open in IMG/M
3300031780\|Ga0318508_1214072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300031796\|Ga0318576_10431818	Not Available	622	Open in IMG/M
3300031805\|Ga0318497_10801677	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	528	Open in IMG/M
3300031945\|Ga0310913_10441420	Not Available	924	Open in IMG/M
3300031947\|Ga0310909_11359448	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	569	Open in IMG/M
3300032044\|Ga0318558_10098924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1363	Open in IMG/M
3300032094\|Ga0318540_10576985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.86%
Host-Associated	Host-Associated	7.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.86%
Plants	Host-Associated → Plants	7.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.46%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.79%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.93%
Loam	Environmental → Terrestrial → Soil → Loam	33.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.46%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.79%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	21.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.18%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	20.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.25%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.25%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1047090491	3300000955	Soil	IRNNAITSAFNIGTVGLDFQVAGFGPFHAPGASDMVLRNKNTGEFEVYDIVNNQITTANSLGTVGLDWSVGGFAVDPPTLSGTFTDISNDQLVQAMAGFGGDAADDSNSVFLGDDTSQQPLLTTPQQA*
Ga0062595_1023008691	3300004479	Soil	RNKNTGQFEVYDIRSNAITSASNIGTVGLDFQVAGFGPFHAPGASDMVLRNKNTGEFEVYDIVNNQITTANSLGAVGLDFQLGGFAVDPPTVSGAFADISNDQLVQAMAGFGGDVDDQSNIVFLDDDTSQQTFLTTPQYA*
Ga0066683_100465335	3300005172	Soil	VGPDFQVAGFGPFHAAGASDMILRNKNTGEFFVYDIVNNQITTANSLGAVGLDWSVGGFAVDPPTLSGTFADMSNDQLVQAMAGFGGDAGDDSNSIFLGDDTSQQALLTTPQA*
Ga0066678_111380321	3300005181	Soil	IRNNAITSAFNIGTVGLDFQVAGFGPFHAPGASDMILRNANSGEFEVYDIVNNQITTANSLGTVGLDFQVGGFAVDPPTVSGTFTDISDDQLVQAMAGFGGDANDGSNSVFLGDDTSQQPLLTTPQ*
Ga0066676_111388691	3300005186	Soil	FQVAGFGPFHAPGASDMILRNANSGEFEVYDIVNNQITTANSLGAVGLDFQVGGFAADPPTLSGTFTDISNDQLVQAMAGFGGDAADDSNSVFLGDDTSQQPLLTTPQQA*
Ga0066388_1004410691	3300005332	Tropical Forest Soil	LNFQVAGFGPFHGPGTSDMILRNATTGEFEVYDIVNNQITSANSLGTVGLDFQVGGFAVDPPTGAAGASGEVGQLVQAMAGFGDGAADNLNTVALGADTSQPLLTAPQQA*
Ga0066388_1077548621	3300005332	Tropical Forest Soil	EFEVYDIASNQITTANSLGSVGLDWSVGGFASDPPTVSGAFTDISNAQLVQAMAGFGGGSGAGESLNAAALSADTSQQPSLTTPQHA*
Ga0070703_104567751	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	ITSAFNIGTVGLDFQVAGFGPFHAPGASDMILRNVNSGEFEVYDIVNNQITTANSLGAVGLDFQVGGFAVDPPTLSGTFTDISNDQLVQAMAGFGGDAADDSNSVFLGDDTSQQPLLTTPQ*
Ga0070709_104845241	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MMLRNKNTGAFELYDIRNNAIIAASSPGTVGPDFQVAGFGPFHAPGASDMVLRNANTGEFEVYDIVNNQITSANSLGTVGLDWSVGGFATDPPAASGAFADGSNDRLVQTMAGFGAGAAETSGSVPLVLETSQQLLTTPQHA*
Ga0070709_117175391	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	SAFNIGTVGPDFEVAGFGPFHAAGASDMILRNRSSGEFFVYDIVNNQITTANSLGTVGLDWSVGGFAADPPSGNSGQITQLVQAMADFGGGGDAADGLDAAAFGSDAQQPFLTTPQNA*
Ga0070713_1013841211	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	FHAPGASDMVLRNTATGEFEVYDIVNNQITTANSLGTVGLDWSVGGFAVDPPSASGGFADGSNDQLVQAMAGFDGGGMAETLNATAFGSDMSQQTLLTTPQHA*
Ga0070713_1018635501	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	DFQVAGFGPFHAPGASDMILRNANTGQFEVYDIVNNQITTANSLGAVGLDFQVGGFAVDPPTASSASMGGSSQVGQLVQAMAGFDGGNGGAEIMNTAALTADTSQQTFLTPPQQA*
Ga0070711_1018426771	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	ITSAFNIGTVGLDFQVAGFGPFHAPGASDMILRNAHSGEFEVYDIVNNQITTANSLGAVGLDFQVGGFAVDPPTGSSASMGDSSDVTQLVQAMAGFGDGESGDGVDIVPLGADTSHQTLLTTPPQA*
Ga0070705_1017386831	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RNSNTGQFEVYDIRNNAITSAFNIGTVGLDFQVAGFGPFHAPGASDMILRNVNSGEFEVYDIVNNQITTANSMGAVGLDFQLGGFAVDPPTGSSASMGDSSNVTQLVQAMAGFGGDAADDSNSVFLGDDTSQQPLLTTPQ*
Ga0070708_1012323781	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	DFQVAGFGPFHAPGASDMILRNVNSGEFEVYDIVNNQITTANSMGAVGLDFQLGGFAVDPPTLSGTFTDISNDQLVQAMAGFGGDAADDSNSVFLGDDTSQQPSLTTPQ*
Ga0066687_102770563	3300005454	Soil	PGASDMILRNVNSGEFEVYDIVNNQITTANSMGAVGLDFQVGGFAVDPPTLSGTFTDISNDQLVQAMAGFGGDAADDSNSVFLGDDTSQQPFLTTPQQA*
Ga0066687_108976671	3300005454	Soil	NIGTVGLDFQVAGFGPFHAPGASDMILRNANTGEFWVYDIVNNQIATSNSLGAVGVDFQLGGFAVDPPTASSGDFSGQLVQAMAGFGGGAADGMNAAPLGADASQQPLLTMPQHA*
Ga0070706_1004830221	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LRNVNTGQFEVYDIRNNAITSASSLGAVGPDFQVAGFGPFHRPGASDMMLRNKNTGQFELYDIVNNQITSASNVGSVGLDFQVGGFVADPPTGSMGSADSTSQLVQAMAGFGGSSGAADGLNAAPLGADTSQQTLLTTPQHA*
Ga0070698_1017699881	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	AFNIGTVGLDFQVAGFGPFHAPGASDMILRNANTGEFEVYDIVNNQITTANSLGAVGLDFQVGGFAVDPPTLSGTFTDISNDQLVQAMAGFGGDAADDSNSVFLGDDTSQQPLLTTPQ*
Ga0070699_1013020041	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	DFQVAGFGPFHAPGASDMILRNVNSGEFEVYDIVNNQITTANSLGTVGLDWSVGGFAVDPPTLSGTFTDISNDQLVQAMAGFGGDAADDSNSVFLGDDTSQQPLLTTPQ*
Ga0066701_107672442	3300005552	Soil	IVNNQITTANSLGTVGLNFQVGGFAVDPPTGSSASMGDSSNVTQLVQALAGFGGGATEGSNSVFLGDDTSQQPLLTTPHA*
Ga0066661_105701701	3300005554	Soil	MLKNTGAFEIYDVKNNAITAASSAGTVGTDFQVAGFGPFHAPGASDMILRNANTGEFEVYDIVNNQITTANSLGPVGLDWSVGGFAVDPPTTSGAFADGSNAQLVQAMAGSW*
Ga0066692_106176181	3300005555	Soil	NTGEFEVYDIVNNQITTANSLGTVGLDWSVGGFAVDPPTLSGTFTDISNDQLVQAMAGFGGDAADDSNSVFLGDDTSQQPLLTTPQHA*
Ga0066704_105807401	3300005557	Soil	PGASDMILRNANTGEFEVYDIVNNQITTANSMGAVGLDFQLGGFAVDPPTLSGTFTDISNDQLVQAMAGFGGDAADDSNSVFLGDDTSQQPLLTTPQQA*
Ga0066700_104604482	3300005559	Soil	PGASDMILRNVNSGQFEVYDIVNNQITTANSMGAVGLDFQLGGFAVDPPTLSGTFTDISNDQLVQAMAGFGGDAADDSNSVFLGDDTSQQPLLTTPQQA*
Ga0068854_1012968051	3300005578	Corn Rhizosphere	GFGPFHAPGASDMILRNKNTGEFEVYDVINNQITSANSMGSVGLDFQVGGFAADPPTGSGAFAVGSNDQLVQAMAGFGGGSGAESLNAVPVGADTSQQSLLSPPQHA*
Ga0066905_1004021422	3300005713	Tropical Forest Soil	DGATDMILRNRNTGQFEVYDIRNNAITSASNLGTVGLDFQVAGFGPFHGPGTSDMMLRNANTGQFEVYDIVNNQITSAFNVGAVGLDFQLGGFAVDPPTVSGTFTDMSSDQLVQAMASFGGGAADDSDSVFLGDDTSQQSFLTPPQA*
Ga0066905_1006473442	3300005713	Tropical Forest Soil	FQVAGFGPFHAPGASDMILRNANTGQFEVYDIVNNQITTANSLGAVGLDFQVGGFAADPPTGATGSSDGSTSQLVQAMAGFGGGAADTSNTVPLGAETSQQTFLTTPQHA*
Ga0066905_1012310622	3300005713	Tropical Forest Soil	PDFQVAGFGPFHAPGASDMVLRNKNSGEFEVYDIVNNQITTANSLGTVGLDWSVGGFAVDSPAGAGGFAGGANDQLVQAMAGFGGGDAADDVNDVDFGSDAQQPFLTTPQYA*
Ga0066903_1001872671	3300005764	Tropical Forest Soil	ASDMILRNVSTGEFEVYDIVSNQITTANSLGTVGLDWSVGGFAADPPAVPGAFVNGSNDQLVHAMAGFGGSGAAESLNAANFGSDVPQQALLTTSQHA*
Ga0066903_1002814174	3300005764	Tropical Forest Soil	FHAPGASDMILRNANTGQFEVYDIVNNQITTANSLGAVGLNFQVGGFAANPATASTGGGGSTAQLVQAMAAFGGGDGAADGLNIAPLGADASQTFLTQPHA*
Ga0066903_1017813531	3300005764	Tropical Forest Soil	GQFELYDIVNNQITSAFNVGAVGLDFQLGGFAADPPTLSGTFTDISNDQLVQAMAGFGGGSGGADTSNTIPLGADTSQQQVLTTPQA*
Ga0066903_1038081571	3300005764	Tropical Forest Soil	MILRNANTGEFEGYDIVNNQITSANSLGSVGLDWSVGGFAVDPPTVSGAFTDISTSQLVQAMEGFGGGSGAANGLNTAPLGADTSPQTLLTTPHA*
Ga0066903_1042876622	3300005764	Tropical Forest Soil	ASNIGTVGLDFQVAGFGPFHAAGASDMILRNANSGEFEVYDIVNNQITTANSLGTVGLDWSVGGFAVDPPTVSGAFTDISDDQLVQAMAGFGSDTADDSNSVFLGDDTSQQTFLTTPHA*
Ga0066903_1063402331	3300005764	Tropical Forest Soil	DMMLRNRNTGQFEVYDIRSNAIASASNIGTVGLDFQVAGFGPFHAAGASDMVLRNKNTGEFEVYDIVNNQITSANSLGTVGLDWSVGGFAVDPPTVSGTFIDISDDQLVQAMAGFGGDTVDDSNSVFLGDDTSPQTFLTTPQPA*
Ga0066903_1077454022	3300005764	Tropical Forest Soil	EFEGYDIVNNQITSANSLGSVGLDWSVGGFAVDPPSVSGTFTDISNDQLVQAMAGFGGGSGAGDSLNTAPLSADISQQTFLTAPQHA*
Ga0075365_102709212	3300006038	Populus Endosphere	MMLRSATSGQFEVYDIVNNQIASAFNVGTVGLNFQVAGFGAFHAPGASDMVLRNTATGEFEVYDIVNNQITTANSLGTVGLDWSVGGFAVDPPSASGGFADGSNNQLVQAMAGFDGGGMAETLNATAFGSDMSQQTLLTTPQHA*
Ga0070715_109902781	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	EVYDIRNNAITAASSPGTVGPDFQVAGFGAFHAAGASDMVLRNKNSGEFEVYDIVNNQITTANSLGSVGLDWSVGGFAVDPPSVSGASADASNDQLLQAMAGFGGDEAADASSAAAFGSDMSHQPLLTTPQYA*
Ga0070712_1011554521	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VGLDFQVAGFGPFHAPGASDMVLRNKNTGEFEVYDIVNNQITTANSLGAVGLDFQLGGFAVDPPTASGTFIDIANDQLVQAMAWLGGGAVDDSNSVFLETSQQTFLTTPQA*
Ga0070712_1013760892	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GQFEVYDIVNNQITTANSMGAVGLDFQLGGFAVDPPTLSGTFTDISNDQLVQAMAGFGGDAADDSNSVFLGDDTSQQPLLTTPQQA*
Ga0079222_113678862	3300006755	Agricultural Soil	GFGAFHAGGASDMILRNKTTGEFEVYDIVNNQITTANSLGTVGLDWSVGGFAVDAPTGAGGSAGGANDQLVQAMAGFDGGDADDDLNVALLGSDISQPLLTMPQQG*
Ga0066665_110277171	3300006796	Soil	GFGPFHAPGASDMILRNKNSGQFEVYDIVKNEITTANSLGAVGLDWSVGGFAVDPPTASGTIIDISNGQLVQAMAGFGGSGAADALNAAPFGADPSPQMHLTTPHA*
Ga0075433_104788881	3300006852	Populus Rhizosphere	VGPDFEVAGFGPFHAAGASDMILRNRSSGEFFVYDIVNNQITTANSLGTVGLDWSVGGFAADPPSGNSGQITQLVQAMADFGGGGDAADGLDAAAFGSDAQQPFLTTPQNA*
Ga0075425_1000759327	3300006854	Populus Rhizosphere	MILRNVNSGEFEVYDIVNNQITTANSMGAVGLDFQVGGFAVDPPTLSGTFTDISNDQLVQAMAGFGGGATDDSNSVFLGDDTSQQPFLTTPQQA*
Ga0079219_105043061	3300006954	Agricultural Soil	FEIYTVRSNAIVAASSPGIVGTDFQVAGFGVFHAGGTSDMILRNKNTGEFFVYDIVNNQITTANSLGSVGLDWSVGGFAADAPSASGASAGVSNDRLVQAMAGFAGGDAANDLNDAILGAADISQPSFLTSPNA*
Ga0099794_106808172	3300007265	Vadose Zone Soil	MMLRNSNTDQFEVYDIRNNAITSAFNIGTVGLDFQVAGFGPFHAPGASDMILRNAHSGEFEVYDIVNNQITTANSMGAVGLDWSVGGFAVDPPTGSTGSTSQLVQAMAGFGDDAADDSNDVFLGADTS
Ga0075418_107843891	3300009100	Populus Rhizosphere	ITSASNIGTVGLDFQVAGFGPFHAPAASDMILRNRSSGEFFVYDIVNNQITTANSLGTVGLDWSVGGFAADPPSGNSGQITQLVQAMADFGGGGDAAQSPSALALGVDPSQQPLLTMPPQHV*
Ga0111538_122868571	3300009156	Populus Rhizosphere	MILRNKNTGEFEVYDVINNQITSANSMGSVGLDFQVGGFAADPPTGSGAFAVGSNDQLVQAMAGFGGGSGAVESLNAAPLSADPSQQSLLTTPQHA*
Ga0075423_103326761	3300009162	Populus Rhizosphere	PLASDMILRNKNTGEFEVYDIVNNQITTANSLGTVGLDWSVGGFAADPPTVSGAFTDISNDQLVQAMAGFGGGSGAGESLNAGLVNADTSQQPLLTTPQHA*
Ga0126384_115680351	3300010046	Tropical Forest Soil	GPFHGPATSDMMLRSTTTGQFEVYDIVNNQITSASNIGTVGLDFQVGGFAVDPPTASGTFTDISDDQLVQAMAGFGGGAADDLNTVALGDDTSPESFLMAPQYA*
Ga0126384_125022261	3300010046	Tropical Forest Soil	NTGEFEVYDIVNNQITAANSLGSVGLDWSVGGFAVDPLTASGTFTDISNDQLAQAMAGFGGGAGDDSNSVFLGDDTAQQTFLTTPQPA*
Ga0126370_111143701	3300010358	Tropical Forest Soil	GLDFEVAGFGPFHAPAASDMILRNKNSGEFEVYDIVNNQITTANSLGSVGLDWSVGGFAVDPPTVSGAFTDMSNDQLVQAMAGFGGDTADDSDGVFLGDDASQQTFLTTPQA*
Ga0126370_119751782	3300010358	Tropical Forest Soil	MILRNKNTGEFEVYDIVNNQITSANSLGSVGLDWSVGGFAVDPPTASDAFVDMSSDQLVQAMAGFGGDAADDSNSVFLGNDTSQQTFLTTPHV*
Ga0126378_108561671	3300010361	Tropical Forest Soil	QVAGFGPFHAPGASDMMLRNANTGQFEVYDLVNNQITAANSLGAVGLNFQVGGFAADPPTENASDVGQLVQAMASFGGSGAEESLNAAPLGTETSQQLLTIPQHT*
Ga0126383_107348732	3300010398	Tropical Forest Soil	EFEVYDIVNNQITTANSLGSVGLDWSVGGFAVDPPSVSGTFTDISNDQLVQAMAGFGGGSGAGESVNPAPLSADTSQQPFLTTPHA*
Ga0126383_123317502	3300010398	Tropical Forest Soil	HGPGTSDMMLRNANTGQFELYDIVNNQITSAFNVGAVGLDFQVGGFAVDPPTDNSGDAGQLVQAMAGFGDGSGAAENLSPAAFSADASQQTFLTTPQHA*
Ga0134121_125539151	3300010401	Terrestrial Soil	GPFHAPGASDMILRNKNTGEFEVYDVINNQITSANSMGSVGLDFQVGGFAADPPTGSGAFAVGSNDQLVQAMAGFGGGSGAVESLNAAPLSADPSQQSLLTTPQHA*
Ga0124850_11341311	3300010863	Tropical Forest Soil	VNNQITSAFDIGTVGPEFQVAGFGPFHAPGTSDMMLRNATSGQFELYDIVNNQITSAFNIGAVGLNFQVGGFAADPPTASVGSSGSTSQLVQAMAGFGGSNGAADGLNTVPLGADTSQQQFLTTPHV*
Ga0137388_113839061	3300012189	Vadose Zone Soil	NAITSAFNIGTVGLDFQVAGFGPFHAPGASDMILRNANTGEFEVYDIVNNQITTANSLGTVGLDFQVGGFAVDPPTVSGTFTDISDDQLVQAMAGFGGDANDGSNSVFLGDDTTQQTLLTTPQQA*
Ga0137376_109893062	3300012208	Vadose Zone Soil	VGLDFQVAGFGPFHAPGASDMILRNANTGEFEVYDIVNNQITTANSLGAVGLDFQVGGFAADPPTGAMGRTGSTSQLVQAMAGFDGGSGAGEGLNASFVSADTSQQSLLTVPQHA*
Ga0137360_111765432	3300012361	Vadose Zone Soil	TGQFEVYDIRNNAITSAFNIGTVGLDFQVAGFGPFHAPGASDMILRNANTGEFEVYDIVNNQITTANSLGTVGLNFQVGGFAVDPPTTSGAFAGGSNDQLVQAMAGFGVGSGAGDSLNAAPLGADTSQQPLLTTPQHA*
Ga0137360_112253772	3300012361	Vadose Zone Soil	AFNIGTVGLDFQVAGFGPFHAPGASDMILRNANTGEFEVYDIVNNQITTANSLGAVGLDWSVGGFAVDPPTVSDTFTDISNDQLVQAMAGLGGDTADDSNSVFLGDDTSQQTFLTTPHA*
Ga0137361_102605541	3300012362	Vadose Zone Soil	TGQFELYDIRNNAITSAFNIGTVGLDFQVAGFGPFHAPGASDMILRNAHSGEFEVYDIVNNEITTSNSMGAVGLDFQLGGFAVDPPTGSMGSSGLTSQLVQAMAGFGGGGGAAGSLSAAALGADTSQQTLLTTPLHG*
Ga0164299_103101981	3300012958	Soil	SPGTVGPDFQVAGFGPFHAPGASDMILRNKNTREFEVYDVINNQITSANSMGSVGLDFQVGGFAADPPTGSGAFAVGSNDQLVQAMAGFGGGSGAVESLNAAPLSADPSQQSLLTTPQHA
Ga0126369_114744301	3300012971	Tropical Forest Soil	NTGQFELYDIVNNQITSAFNIGAVGLDFQLGGFAVDPPTGSMGSSDGSTSQLVQAMAGFGGDAADDSNDISLGADTSQQLFLTTPQT*
Ga0126369_115056531	3300012971	Tropical Forest Soil	GQFEVYDIVNNAITSAFNIGTVGLNFQVAGFGPFHGPATSDMILRNATTGEFEVYDIVNNAITSANSLGTVGLDFQVGGFAVDPPAGLPGDSTRVGQLVQTMAAFGSGAAGGLNTAPLDADTSQPFLTTPQHA*
Ga0126369_115058702	3300012971	Tropical Forest Soil	LDFQVAGFGAFHAPGASDMILRNANTGQFEVYDIVNNQITTANSLGAVGLDFQLGGFAADPPTASGAFTDISTSQLVQAMAGFGGGSGAADNAVALGANTSQQPLLTTPHA*
Ga0164304_107123542	3300012986	Soil	KNNAIVVASSPGTVGPDFQVAGFGPFHAPGASDMILRNANSGEFEVYDIVNNQITTANSLGSVGLDWSVGGFAVDPPTVSGAFADASNDQLVQTMAGFGAGGAAESLNVPAFSDMSQQALLTTPQHA*
Ga0164304_114776001	3300012986	Soil	DMILRNKNTGEFEVYDVINNQITSANSMGSVGLDFQVGGFAADPPTGSGAFAVGSNDQLVQAMAGFGGGSGAVESLNAAPLSADPSQQSLLTTPQHA*
Ga0182033_120390701	3300016319	Soil	NIRANAITSASNLGTVGLDFQVAGFGPFHGPGTSDMMLRNATSGQFELYDIVNNRITSAFNIGAVGLDFQLGGFAADPPTLSGAFTDISNDQLVQAMAGFGGSSGAADGLSTVPLGADTSQQQLLTTPQHV
Ga0182035_101011141	3300016341	Soil	NAITAASSPGTVGLNFQAAGFGPFHAAGASDMVLRNTTTGEFEVYDIVNNQITTANSLGTVGLDWSVGGFAADPPAGSTGDSSGQLAQAMAGFGGGGAAESLNVTPPLGADTSQQQFLTMPQHA
Ga0182035_111188971	3300016341	Soil	PDFQVAGFGPFHAPGASDMILRNGNTGQFEVYDIVNNQITTANSLGAVGLDFQVGGFAADPATGSMGSSDSTSQLVQAMAGFGGGSGAADGLNTGLASADTSQHPLLTAPQHA
Ga0182032_102485503	3300016357	Soil	LNFQAAGFGPFHAAGASDMVLRNTTTGEFEVYDIVNNQITTANSLGTVGLDWSVGGFAADPPAGSTGDSSGQLAQAMAGFGGGGAAESLNVTPPLGADTSQQQFLTMPQHA
Ga0066655_103870101	3300018431	Grasslands Soil	NKNTGEFEVYDIVNNQITTANSLGTVGLDWSVGGFAVDPPTLSGTFTDISNDQLVQAMAGFGGDAADDSNSVFLGDDTSQQPLLTTPQQA
Ga0066655_110290071	3300018431	Grasslands Soil	RNRNTGQFEVYDLRSNAITSAFNIGTVGPDFQVAGFGAFHATGASDMVLRNKNTGEFEVYDIVNNQITTSNGLGTVGLDWSVGGFAVDVPTGAGAFAGGANDQLVQAMAGFGGGDAADDLNAALLGSDISQPLLTMPQQG
Ga0066667_110683242	3300018433	Grasslands Soil	LDFQVAGFGPFHAPGASDMILRNANTGEFEVYDIVNNQITTANSMGAVGLDFQLGGFAVDPPTLSGTFTDISNDQLVQAMAGFGGDAADDSNSVFLGDDTSQQPLLTTPQQA
Ga0210407_104241601	3300020579	Soil	TVGPDFQVAGFGPFDAPSASDMILRNANTGQFEVYDIVNNQITTANGMGTVGLDWSVGGFAVDPPTGSMGNSDGSTSQLVQAMAGFGGEGGAADASNTTPLGADTSQQPSLTTPQHP
Ga0210408_107685031	3300021178	Soil	TCEIYDTKNNAITSASSPGTVGPDFQVAGFGPFDAPSASDMILRNANTGQFEVYDIVNNQITTANGMGTVGLDWSVGGFAVDPPTGSMGNSDGSTSQLVQAMAGFGGEGGAADASNTTPLGADTSQQPSLTTPQHP
Ga0210397_109053851	3300021403	Soil	TGQRPTNTGTFEIYDTKNNAITSASSPGTVGPDFQVAGFGPFDAPSASDMILRNANTGQFEVYDIVNNQITTANGMGTVGLDWSVGGFAVDPPTGSMGNSDGSTSQLVQAMAGFGGEGGAADASNTTPLGADTSQQPSLTTPQHP
Ga0210410_108150422	3300021479	Soil	QVAGFGPFQAAGASDMVLRNKNTGEFEVYDIVNNQITTANSLRTVGLDWSVGGFAVDPPAVSGAFADASNDQLVQAMANFGGDAGDDSNSVFFGDDTSQQTFLTTPQQA
Ga0126371_136141441	3300021560	Tropical Forest Soil	FQVAGFGAFYAPTASDMILRNVSTGEFEVYDIVSNQITTANSLGTVGLDWSVGGFASDPPTLSGTFTDISNDQLVQAMAGFGGGAADTSATAPLSADTSQQMFLTTPHA
Ga0207692_103614731	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	FGAFHAAGASYMVLRNANTGEFEVYDIVNNQITTANSLGTVGLDWSVGGFAADPPSASGAFSDGSNDRLVQVMAGFADGSGAAENVNTGVFAADMSQAFLAAVQHG
Ga0207685_102029361	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VAGFGPFHAAGASDMILRNRSSGEFFVYDIVNNQITTANSLGTVGLDWSVGGFAADPPSGNSGQITQLVQAMADFVGGGDAADGLNAALGAGDTSQQTFLTTPNA
Ga0207693_101515684	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	TSASNLGTVGLDFQVAGFGPFHAPGASDMILRNANTGQFEVYDIVNNQITTANSLGAVGLDFQVGGFAVDPPTASSASMGGSSQVGQLVQAMAGFDGGNGGAEIMNTAALTADTSQQTFLTPPQQA
Ga0207693_111860001	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	SNAITSASNIGTVGLDFQVAGFGPFHAPGASDMVLRNKNTGEFEVYDIVNNQITTANSLGAVGLDFQLGGFAVDPPTASGTFIDIANDQLVQAMAWLGGGAVDDSNSVFLETSQQTFLTTPQA
Ga0207646_118599521	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	DFQVAGFGPFHRPGASDMMLRNKNTGQFELYDIVNNQITSASNVGSVGLDFQVGGFVADPPTGSMGSADSTSQLVQAMAGFGGSSGAADGLNAAPLGADTSQQTLLTTPQHA
Ga0207700_111852781	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	FHAPGASDMVLRNTATGEFEVYDIVNNQITTANSLGTVGLDWSVGGFAVDPPSASGGFADGSNDQLVQAMAGFDGGGMAETLNATAFGSDMSQQTLLTTPQHA
Ga0207700_114733981	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GPFHAAGASDMILRNKNTGEFFVYDIVNNQITTANSLGAVGLDWSVGGFAVDPPTLSGTFADMSNDQLVQAMAGFGGDAGDDSNSIFLGDDTSQQALLTTPQA
Ga0207700_119699201	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	PDFEVAGFGPFHAAGASDMILRNRSSGEFFVYDIVNNQITTANSLGTVGLDWSVGGFAADPPSGNSGQITQLVQAMADFGGGGDAADGLDAAAFGSDAQQPFLTTPQNA
Ga0207664_107405242	3300025929	Agricultural Soil	VGPDFQVAGFGAFHAAGASDMVLRNKNSGEFEVYDIVNNQITTANSLGSVGLDWSVGGFAVDPPSVSGASADASNDQLLQAMAGFGGDEAADASSAAAFGSDMSHQPLLTTPQYA
Ga0207665_116302681	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	GSFEIYDIKNNAITSASSPGTVGPDFQVAGFGPFHAVGASDMILRNKNTGEFEVYDIVNNQITTANSLGTVGLDWSVGGFAVDPPAVSGAFADASNDQLVQAMASFGGDAGGDSNSVFLGDDTSQQTFLTTPQQA
Ga0207675_1018505751	3300026118	Switchgrass Rhizosphere	VGPDFEVAGFGPFHAAGASDMILRNRNTGEYFVYDIVNNQITTANSLGSVGLDWSVGGFAVDPPSVSGASADASNDQLLQAMAGFGGDEAADASSAAAFGSDMSHQPLLTTPQYA
Ga0209577_100874738	3300026552	Soil	VNSGEFEVYDIVNNQITTANSMGAVGLDFQLGGFAVDPPTGSSASMGDSSDVAELVQAMAGFGGDAADDSNSVFLGDDTSQQPLLTTPQQA
Ga0209577_105535293	3300026552	Soil	SDMILRNKNTGEFEVYDIVNNQITTANSLGTVGLDWSVGGFAADPPTLTGSFAEISNDQLVQAMAGLGGGSGAADGLNAGFAIAETSEQTWSTTPHHT
Ga0209465_103993691	3300027874	Tropical Forest Soil	YNIRNNAITSASNLGTVGLDFQVAGFGPFHGPGTSDMMLRNVNTGQFELYDIVNNQITSAFNIGAVGLDFQLGGFAVDPPTGSLGSSDGSTSQLVQAMAGFGGGGSAAESLNAAALATDTSPQPLLTTPQHA
Ga0209590_103538912	3300027882	Vadose Zone Soil	ILRNANTGEFEVYDIVNNQITTANSLGAVGLDFQVGGFAIDPPTGSSASMGDSSDVTQLVQAMAGFGDGESGDGVDTIPFGADTSQQTLLTTPTQV
Ga0307317_101693771	3300028720	Soil	NSNTGQFEVYDIRNNGITSAFNIGTVGPDFQVAGFGPFHAAGASDMVLRNANTGEFFVYVIVNNQITTANSLGSVGLDWSVGGFAVDPPSASGGFADASNDQLVQAMAGFGGGGAAESLTAAGFGSDASQQALLTPPQHA
Ga0307280_103379641	3300028768	Soil	TFIGTVGLDWQFAGIGPVHGPGESDLVLRNVNTGQFEVYDIVNNQITTANSLGAVGLDFQLGGFAVDPPTVSGAFADISNDQLVQAMAGFGGDVDEQSNIDFLDDDTSQQTFLSTPQYA
Ga0307282_100628151	3300028784	Soil	ANTGEFFVYVIVNNQITTANSLGSVGLDWSVGGFAVDPPSASGGFADASNDQLVQAMAGFGGGGAAESLTAAGFGSDASQQALLTPPQHA
Ga0307310_101097621	3300028824	Soil	GLDFQVAGFGPFHAPGASDMVLRNKNTGEFEVYDIVNNQITTANSLGAVGLDFQLGGFAVDPPTVSGAFADISNDQLVQAMAGFGGDVDEQSNIDFLDDDTSQQTFLSTPQYA
Ga0318538_100937461	3300031546	Soil	DMILRNANSSQVEVYDIVNNQITTANSLGAVGLDFQVGGFAADPPTASAGGSDGSTSQLVQAMAGFGGGSGADDSLNNALSTADTSEQPLLTTPQCG
Ga0318555_100890941	3300031640	Soil	PGASDMILRNANSSQVEVYDIVNNQITTANSLGAVGLDFQVGGFAADPPTASAGGSDGSTSQLVQAMAGFGGGSGADDSLNNALSTADTSEQPLLTTPQCG
Ga0318501_103926631	3300031736	Soil	DIRNNAITSAFNIGTVGLDFQVVGFGPFHAPGASDMILRNANSSQVEVYDIVNNQITTANSLGAVGLDFQVGGFAADPPTASAGGSDGSTSQLVQAMAGFGGGSGADDSLNNALSTADTSEQPLLTTPQCG
Ga0318546_102025391	3300031771	Soil	SPGTVGLNFQAAGFGPFHAAGASDMVLRNTTTGEFEVYDIVNNQITTANSLGTVGLDWSVGGFAADPPAGSTGDSSGQLAQAMAGFGGGGAAESLNVTPPLGADTSQQQFLTMPQHA
Ga0318546_108680012	3300031771	Soil	LVLRNVNNRQFEVYDIVNNQITSAFNIGAVGLDFQLGGFAVDPPTVSGTFTDISSDQLAQNGRFGGGAADNSNDISLGDDMSQHTFLTAPHA
Ga0318508_12140721	3300031780	Soil	LVLRNVNNRQFEVYDIVNNQITSAFNIGAVGLDFQLGGFAVDPPTVSGTFTDISSDQLAQNGRFGGGAADNSNDISLGDDMSQHTFLTALHA
Ga0318576_104318181	3300031796	Soil	FHAAGASDMVLRNTTTGEFEVYDIVNNQITTANSLGTVGLDWSVGGFAADPPAGSTGDSSGQLAQAMAGFGGGGAAESLNVTPPLGADTSQQQFLTMPQHA
Ga0318497_108016771	3300031805	Soil	NNITNAAALGTVGLNFQVAGFGAFHAPGASDMILRNANTGQFEVYDIVNNQITTANSLGAVGLDFQVGGFAADPATGSMGSSDSTSQLVQAMAGFGGGSGAADGLNTGLASADTSQHPLLTAPQHA
Ga0310913_104414201	3300031945	Soil	EIYDIKNNAITAASSPGTVGLNFQAAGFGPFHAAGASDMVLRNTTTGEFEVYDIVNNQITTANSLGTVGLDWSVGGFAADPPAGSTGDSSGQLAQAMAGFGGGGAAESLNVTPPLGADTSQQQFLTMPQHA
Ga0310909_113594481	3300031947	Soil	GPDFQVAGFGPFHAPGASDMILRNGNTGQFEVYDIVNNQITTANSLGAVGLDFQVGGFAADPATGSMGSSDSTSQLVQAMAGFGGGSGAADGLNTGLASADTSQHPLLTAPQHA
Ga0318558_100989241	3300032044	Soil	VLRNVNNRQFEVYDIVNNQITSAFNIGAVGLDFQLGGFAVDPPTVSGTFTDISSDQLAQNGGFGGGAADNSNDISLGDDMSQHTFLTAPHA
Ga0318540_105769852	3300032094	Soil	ANAITSASNLGTVGLDFQVAGFGPFHGPGTSDMMLRNATSGQFELYDIVNNRITSAFNIGAVGLDFQLGGFAADPPTLSGAFTDISNDQLVQAMAGFGGSSGAADGLSTVPLGADTSQQQLLTTPQHV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F084747

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences