Metagenome / Metatranscriptome Family F084708

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Overview

Basic Information
Family ID	F084708
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	48 residues
Representative Sequence	MNSMNQSKVDDELKKLAMDYIKATNANDQALAETIMHNMEELKKLTHA
Number of Associated Samples	54
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	66.96 %
% of genes near scaffold ends (potentially truncated)	12.50 %
% of genes from short scaffolds (< 2000 bps)	82.14 %
Associated GOLD sequencing projects	45
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Predicted Viral (48.214 % of family members)
NCBI Taxonomy ID	10239 (predicted)
Taxonomy	All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (44.643 % of family members)
Environment Ontology (ENVO)	Unclassified (69.643 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (95.536 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.26% β-sheet: 0.00% Coil/Unstructured: 44.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01555	N6_N4_Mtase	4.46
PF13640	2OG-FeII_Oxy_3	3.57
PF13759	2OG-FeII_Oxy_5	3.57
PF00156	Pribosyltran	1.79
PF12098	DUF3574	0.89
PF07484	Collar	0.89
PF14240	YHYH	0.89
PF02086	MethyltransfD12	0.89
PF11623	NdhS	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	4.46
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	4.46
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	4.46
COG0338	DNA-adenine methylase	Replication, recombination and repair [L]	0.89
COG3392	Adenine-specific DNA methylase	Replication, recombination and repair [L]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.71 %
Unclassified	root	N/A	39.29 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	58.04 %
Unclassified	root	N/A	39.29 %
cellular organisms	root	All Organisms → cellular organisms	2.68 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	48.21 %
Unclassified	root	N/A	39.29 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	8.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.68 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	48.21 %
Unclassified	root	N/A	39.29 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	8.93 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.68 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	48.21 %
Unclassified	root	N/A	39.29 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	8.93 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	2.68 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	48.21 %
Unclassified	root	N/A	39.29 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	8.93 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.68 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	48.21 %
Unclassified	root	N/A	39.29 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	6.25 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	2.68 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	2.68 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	48.21 %
Unclassified	root	N/A	39.29 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	6.25 %
uncultured phage MedDCM-OCT-S04-C348	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S04-C348	2.68 %
Synechococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae	2.68 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	48.21 %
Unclassified	root	N/A	39.29 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	6.25 %
Synechococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus	2.68 %
uncultured phage MedDCM-OCT-S04-C348	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S04-C348	2.68 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	48.21 %
Unclassified	root	N/A	39.29 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	6.25 %
unclassified Synechococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus	2.68 %
uncultured phage MedDCM-OCT-S04-C348	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S04-C348	2.68 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	48.21 %
Unclassified	root	N/A	39.29 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	6.25 %
Synechococcus sp. ARS1019	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. ARS1019	2.68 %
uncultured phage MedDCM-OCT-S04-C348	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S04-C348	2.68 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005400\|Ga0066867_10013780	All Organisms → Viruses → Predicted Viral	3420	Open in IMG/M
3300005404\|Ga0066856_10044079	All Organisms → Viruses → Predicted Viral	1949	Open in IMG/M
3300005404\|Ga0066856_10052999	All Organisms → Viruses → Predicted Viral	1773	Open in IMG/M
3300005404\|Ga0066856_10061254	All Organisms → Viruses → Predicted Viral	1643	Open in IMG/M
3300005404\|Ga0066856_10112941	All Organisms → Viruses → Predicted Viral	1186	Open in IMG/M
3300005404\|Ga0066856_10143292	All Organisms → Viruses → Predicted Viral	1043	Open in IMG/M
3300005424\|Ga0066826_10052579	All Organisms → Viruses → Predicted Viral	1555	Open in IMG/M
3300005429\|Ga0066846_10249377	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S04-C348	583	Open in IMG/M
3300005430\|Ga0066849_10090547	All Organisms → Viruses → Predicted Viral	1219	Open in IMG/M
3300005597\|Ga0066832_10009026	All Organisms → Viruses → Predicted Viral	3327	Open in IMG/M
3300005599\|Ga0066841_10001498	All Organisms → Viruses → Predicted Viral	3838	Open in IMG/M
3300005599\|Ga0066841_10006947	All Organisms → Viruses → Predicted Viral	1852	Open in IMG/M
3300005599\|Ga0066841_10011189	All Organisms → Viruses → Predicted Viral	1440	Open in IMG/M
3300005599\|Ga0066841_10056177	Not Available	639	Open in IMG/M
3300005599\|Ga0066841_10070497	Not Available	578	Open in IMG/M
3300006024\|Ga0066371_10022272	All Organisms → Viruses → Predicted Viral	1737	Open in IMG/M
3300006024\|Ga0066371_10103113	Not Available	856	Open in IMG/M
3300006166\|Ga0066836_10402925	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	824	Open in IMG/M
3300006332\|Ga0068500_1102815	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	10454	Open in IMG/M
3300006332\|Ga0068500_1665034	All Organisms → Viruses → Predicted Viral	1781	Open in IMG/M
3300006412\|Ga0099955_1038004	All Organisms → Viruses → Predicted Viral	1678	Open in IMG/M
3300006478\|Ga0100224_1017554	All Organisms → Viruses → Predicted Viral	1664	Open in IMG/M
3300006478\|Ga0100224_1032549	All Organisms → Viruses → Predicted Viral	1068	Open in IMG/M
3300006565\|Ga0100228_1037721	All Organisms → Viruses → Predicted Viral	3144	Open in IMG/M
3300006565\|Ga0100228_1201985	All Organisms → Viruses → Predicted Viral	1278	Open in IMG/M
3300006751\|Ga0098040_1087376	All Organisms → Viruses	946	Open in IMG/M
3300008097\|Ga0111541_10003946	Not Available	5143	Open in IMG/M
3300008097\|Ga0111541_10013666	All Organisms → Viruses → Predicted Viral	2956	Open in IMG/M
3300008097\|Ga0111541_10058975	All Organisms → Viruses → Predicted Viral	1502	Open in IMG/M
3300009593\|Ga0115011_10278687	All Organisms → Viruses → Predicted Viral	1264	Open in IMG/M
3300009593\|Ga0115011_10390483	All Organisms → Viruses → Predicted Viral	1081	Open in IMG/M
3300009593\|Ga0115011_10534884	Not Available	935	Open in IMG/M
3300009593\|Ga0115011_10842287	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	763	Open in IMG/M
3300009593\|Ga0115011_12166293	Not Available	512	Open in IMG/M
3300009679\|Ga0115105_10128931	Not Available	846	Open in IMG/M
3300009679\|Ga0115105_10193889	Not Available	568	Open in IMG/M
3300009679\|Ga0115105_10378276	All Organisms → Viruses → Predicted Viral	2512	Open in IMG/M
3300009679\|Ga0115105_10458524	Not Available	936	Open in IMG/M
3300009679\|Ga0115105_10577910	Not Available	882	Open in IMG/M
3300009679\|Ga0115105_11360815	All Organisms → Viruses → Predicted Viral	1511	Open in IMG/M
3300009790\|Ga0115012_10365100	All Organisms → Viruses → Predicted Viral	1101	Open in IMG/M
3300009790\|Ga0115012_10531670	Not Available	923	Open in IMG/M
3300009790\|Ga0115012_11301879	Not Available	615	Open in IMG/M
3300011324\|Ga0138385_1024667	Not Available	501	Open in IMG/M
3300012952\|Ga0163180_10050194	All Organisms → Viruses → Predicted Viral	2508	Open in IMG/M
3300012953\|Ga0163179_10970928	Not Available	739	Open in IMG/M
3300012954\|Ga0163111_12777575	Not Available	500	Open in IMG/M
3300017757\|Ga0181420_1233641	Not Available	526	Open in IMG/M
3300017767\|Ga0181406_1166862	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	659	Open in IMG/M
3300020255\|Ga0211586_1041277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. ARS1019	784	Open in IMG/M
3300020345\|Ga0211706_1057248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. ARS1019	810	Open in IMG/M
3300020345\|Ga0211706_1114492	Not Available	539	Open in IMG/M
3300020394\|Ga0211497_10070621	All Organisms → Viruses → Predicted Viral	1463	Open in IMG/M
3300020395\|Ga0211705_10023979	All Organisms → Viruses → Predicted Viral	2224	Open in IMG/M
3300020395\|Ga0211705_10041860	All Organisms → Viruses → Predicted Viral	1655	Open in IMG/M
3300020411\|Ga0211587_10433100	Not Available	530	Open in IMG/M
3300020416\|Ga0211644_10286961	Not Available	677	Open in IMG/M
3300020428\|Ga0211521_10207754	Not Available	893	Open in IMG/M
3300020438\|Ga0211576_10000360	Not Available	38776	Open in IMG/M
3300020445\|Ga0211564_10064504	All Organisms → Viruses → Predicted Viral	1828	Open in IMG/M
3300020445\|Ga0211564_10096326	All Organisms → Viruses → Predicted Viral	1473	Open in IMG/M
3300020445\|Ga0211564_10098369	All Organisms → Viruses → Predicted Viral	1458	Open in IMG/M
3300020445\|Ga0211564_10100843	All Organisms → Viruses → Predicted Viral	1439	Open in IMG/M
3300020445\|Ga0211564_10292733	Not Available	803	Open in IMG/M
3300020445\|Ga0211564_10327948	Not Available	753	Open in IMG/M
3300020449\|Ga0211642_10126871	All Organisms → Viruses → Predicted Viral	1103	Open in IMG/M
3300020449\|Ga0211642_10321056	Not Available	666	Open in IMG/M
3300020450\|Ga0211641_10243671	Not Available	887	Open in IMG/M
3300020452\|Ga0211545_10230409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. ARS1019	853	Open in IMG/M
3300020457\|Ga0211643_10525254	Not Available	582	Open in IMG/M
3300020465\|Ga0211640_10001369	Not Available	15701	Open in IMG/M
3300020467\|Ga0211713_10401162	Not Available	664	Open in IMG/M
3300020467\|Ga0211713_10645000	Not Available	515	Open in IMG/M
3300020470\|Ga0211543_10096817	All Organisms → Viruses → Predicted Viral	1511	Open in IMG/M
3300020471\|Ga0211614_10406602	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	602	Open in IMG/M
3300020472\|Ga0211579_10007408	Not Available	7642	Open in IMG/M
3300020472\|Ga0211579_10042544	All Organisms → Viruses → Predicted Viral	2851	Open in IMG/M
3300020472\|Ga0211579_10049870	All Organisms → Viruses → Predicted Viral	2602	Open in IMG/M
3300020472\|Ga0211579_10083934	All Organisms → Viruses → Predicted Viral	1925	Open in IMG/M
3300020472\|Ga0211579_10102213	All Organisms → Viruses → Predicted Viral	1718	Open in IMG/M
3300020472\|Ga0211579_10232599	All Organisms → Viruses → Predicted Viral	1063	Open in IMG/M
3300020472\|Ga0211579_10243775	All Organisms → Viruses → Predicted Viral	1035	Open in IMG/M
3300020472\|Ga0211579_10399923	Not Available	779	Open in IMG/M
3300020472\|Ga0211579_10478750	Not Available	703	Open in IMG/M
3300020472\|Ga0211579_10527294	Not Available	665	Open in IMG/M
3300020475\|Ga0211541_10434668	Not Available	641	Open in IMG/M
3300020478\|Ga0211503_10494767	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S04-C348	646	Open in IMG/M
3300020478\|Ga0211503_10743411	Not Available	500	Open in IMG/M
3300025096\|Ga0208011_1044060	All Organisms → Viruses → Predicted Viral	1051	Open in IMG/M
3300026076\|Ga0208261_1001506	Not Available	8332	Open in IMG/M
3300026076\|Ga0208261_1013271	All Organisms → Viruses → Predicted Viral	2515	Open in IMG/M
3300026077\|Ga0208749_1047322	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	908	Open in IMG/M
3300026077\|Ga0208749_1047788	Not Available	903	Open in IMG/M
3300026077\|Ga0208749_1071954	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	724	Open in IMG/M
3300026077\|Ga0208749_1074351	Not Available	711	Open in IMG/M
3300026166\|Ga0208276_1001174	All Organisms → Viruses → Predicted Viral	4166	Open in IMG/M
3300026166\|Ga0208276_1022648	Not Available	747	Open in IMG/M
3300026166\|Ga0208276_1035983	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured phage MedDCM-OCT-S04-C348	568	Open in IMG/M
3300026257\|Ga0208407_1063619	All Organisms → Viruses → Predicted Viral	1212	Open in IMG/M
3300026260\|Ga0208408_1012609	All Organisms → Viruses → Predicted Viral	3482	Open in IMG/M
3300026321\|Ga0208764_10375705	Not Available	671	Open in IMG/M
3300027906\|Ga0209404_10059223	All Organisms → Viruses → Predicted Viral	2185	Open in IMG/M
3300027906\|Ga0209404_10111642	All Organisms → Viruses → Predicted Viral	1628	Open in IMG/M
3300027906\|Ga0209404_10115175	All Organisms → Viruses → Predicted Viral	1604	Open in IMG/M
3300027906\|Ga0209404_10191390	All Organisms → Viruses → Predicted Viral	1265	Open in IMG/M
3300027906\|Ga0209404_10520740	Not Available	788	Open in IMG/M
3300027906\|Ga0209404_10932273	Not Available	593	Open in IMG/M
3300031774\|Ga0315331_10651724	Not Available	749	Open in IMG/M
3300032006\|Ga0310344_10230018	All Organisms → Viruses → Predicted Viral	1580	Open in IMG/M
3300032006\|Ga0310344_10247251	All Organisms → Viruses → Predicted Viral	1521	Open in IMG/M
3300032006\|Ga0310344_10313319	All Organisms → Viruses → Predicted Viral	1342	Open in IMG/M
3300032006\|Ga0310344_11753126	Not Available	500	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	57.14%
Unclassified	Environmental → Aquatic → Marine → Unclassified	40.18%
Strait	Environmental → Aquatic → Marine → Strait	1.79%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	50.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	40.18%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	7.14%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	44.64%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	40.18%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	6.25%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	3.57%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.79%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	1.79%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.89%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005400	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV261	Environmental	Open in IMG/M
3300005404	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205	Environmental	Open in IMG/M
3300005424	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV49	Environmental	Open in IMG/M
3300005429	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV76	Environmental	Open in IMG/M
3300005430	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69	Environmental	Open in IMG/M
3300005597	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF51B	Environmental	Open in IMG/M
3300005599	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF91A	Environmental	Open in IMG/M
3300006024	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_DCM_ad_63m_LV_B	Environmental	Open in IMG/M
3300006166	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91	Environmental	Open in IMG/M
3300006332	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0200m	Environmental	Open in IMG/M
3300006412	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0125m	Environmental	Open in IMG/M
3300006478	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0125m	Environmental	Open in IMG/M
3300006565	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0125m	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300008097	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_DCM_ad_131m_LV_B (version 2)	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009679	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_155_C17_100m_0.8um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300011324	Marine microbial communities from the Southern Atlantic ocean - KN S17 DCM_A metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012952	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 4 Metagenome	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300020255	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556136-ERR599013)	Environmental	Open in IMG/M
3300020345	Marine microbial communities from Tara Oceans - TARA_B100000427 (ERX556079-ERR599137)	Environmental	Open in IMG/M
3300020394	Marine microbial communities from Tara Oceans - TARA_B000000557 (ERX556068-ERR599026)	Environmental	Open in IMG/M
3300020395	Marine microbial communities from Tara Oceans - TARA_B100000427 (ERX555987-ERR599133)	Environmental	Open in IMG/M
3300020411	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)	Environmental	Open in IMG/M
3300020416	Marine microbial communities from Tara Oceans - TARA_B100001109 (ERX556137-ERR599039)	Environmental	Open in IMG/M
3300020428	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020445	Marine microbial communities from Tara Oceans - TARA_B100001996 (ERX555961-ERR599087)	Environmental	Open in IMG/M
3300020449	Marine microbial communities from Tara Oceans - TARA_B100001079 (ERX556008-ERR599020)	Environmental	Open in IMG/M
3300020450	Marine microbial communities from Tara Oceans - TARA_B100000575 (ERX555933-ERR599077)	Environmental	Open in IMG/M
3300020452	Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)	Environmental	Open in IMG/M
3300020457	Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)	Environmental	Open in IMG/M
3300020465	Marine microbial communities from Tara Oceans - TARA_B100000579 (ERX556060-ERR598961)	Environmental	Open in IMG/M
3300020467	Marine microbial communities from Tara Oceans - TARA_B100000945 (ERX555966-ERR598957)	Environmental	Open in IMG/M
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental	Open in IMG/M
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental	Open in IMG/M
3300020472	Marine microbial communities from Tara Oceans - TARA_B100001250 (ERX556017-ERR598995)	Environmental	Open in IMG/M
3300020475	Marine microbial communities from Tara Oceans - TARA_B100002029 (ERX555951-ERR599001)	Environmental	Open in IMG/M
3300020478	Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX556025-ERR599111)	Environmental	Open in IMG/M
3300025096	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)	Environmental	Open in IMG/M
3300026076	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_DCM_ad_131m_LV_B (SPAdes)	Environmental	Open in IMG/M
3300026077	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_DCM_ad_63m_LV_B (SPAdes)	Environmental	Open in IMG/M
3300026166	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF91A (SPAdes)	Environmental	Open in IMG/M
3300026257	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69 (SPAdes)	Environmental	Open in IMG/M
3300026260	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV67 (SPAdes)	Environmental	Open in IMG/M
3300026321	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91 (SPAdes)	Environmental	Open in IMG/M
3300027906	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300031774	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 34915	Environmental	Open in IMG/M
3300032006	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066867_100137808	3300005400	Marine	LIQMTLKNSMNQAKVDEELKKLAMDYIIATNADNHALAEAIMHNMEELKKLTHA*
Ga0066856_100440796	3300005404	Marine	MNLKNSTNQSKVDDELKKLAMEYIKATNDKDQTLAKTIMHNMEELKKLTHD*
Ga0066856_100529994	3300005404	Marine	MKMSLKNSTNQQKVDDELKKLAMEYINATNANNQSLAETIMHNMEELKKLTSD*
Ga0066856_100612541	3300005404	Marine	MNSINKSKVEDELKKLAMDYIKATNAKDLTLAKTIMTNMEELKKLTNA*
Ga0066856_101129415	3300005404	Marine	KVDDELKKLAMDYIKATNANDQSLAETILNDMQVMKELMKEK*
Ga0066856_101432921	3300005404	Marine	MNSINQSRVEDELKKLAMDYIKATNAKDLTLAKTIMHNMEELKKLTNA*
Ga0066826_100525795	3300005424	Marine	LKNSMNQAKVDEELKKLAMDYIIATNADNHALAEAIMHNMEELKKLTHA*
Ga0066846_102493773	3300005429	Marine	MNQAKVDEELKKLAMDYIIATNADNHALAEAIMHNMEELKKLTHA*
Ga0066849_100905475	3300005430	Marine	MKMSLKNSMNQSKVDEELKKLAMDYIIATNADNQALAETIMHNMEELKKLTHA*
Ga0066832_100090265	3300005597	Marine	MTLKNSMNQAKVDEELKKLAMDYIIATNADNHALAEAIMHNMEELKKLTHA*
Ga0066841_1000149810	3300005599	Marine	MNSMNQSKVDEALKKLAMDYIKATNAKDHSLAENILHDMEVMKNLTKEK*
Ga0066841_100069475	3300005599	Marine	MKMSLKNSMNQSKVDEELKKLAMDYIIATNANNQALAETIMHNMEELKKLTHA*
Ga0066841_100111891	3300005599	Marine	MNSMNQSKVDEELKKLAMDYIIATNANNQALAETIMHNMEELKKLTHA*
Ga0066841_100561771	3300005599	Marine	MNQSKVDEELKKLAMDYIIATNANDQALAETIMHNMEELKKLTHA*
Ga0066841_100704973	3300005599	Marine	MNSINQSRVEDELKKLAMDYIKATNANDQALAETIMHNMEELKKLTHA*
Ga0066371_100222725	3300006024	Marine	MNSMNKSKVEDELKKLAMDYIKATNAKNLTLAETILHNMEELKKLTDA*
Ga0066371_101031134	3300006024	Marine	MNSINKSKVEDELKKLAMEYIKATNAKDLTLAETILHNMEELKKLTNA*
Ga0066836_104029253	3300006166	Marine	MNQSKVDEELKKLAMDYIIATNANNQALAETIMHNMEELKKLTHA*
Ga0068500_11028158	3300006332	Marine	MNQSKVDEELKKLAMDYIKATNANDLSTAETILHNMEELKKLTHA*
Ga0068500_16650344	3300006332	Marine	MNSINQSKVDEELKKMAMDYIKATNAKQHATAESILHDMEVMKNLMKEK*
Ga0099955_10380045	3300006412	Marine	MNSINKSKVEDELKKLAMDYIKATNAKDLTLAKTIMNNMEELKKLTNA*
Ga0100224_10175546	3300006478	Marine	MNSINKSKVEDELKKLAMDYIKATNAKDLTLAKTIMTNMEELKKLTDA*
Ga0100224_10325493	3300006478	Marine	MNSMNQSKVDEELKKLAMDYIKATNANDLSTAETILHNMEELKKLTHA*
Ga0100228_10377215	3300006565	Marine	MNQSKVEDELKKLAMDYIKATNAKDLTLAETILHNMEELKKLTNG*
Ga0100228_12019853	3300006565	Marine	MNSMNQSKVDDELKKLAMDYIKATNANDQSLAETIMHNMEELKKLTHA*
Ga0098040_10873763	3300006751	Marine	MNQSKVDEELKKLAMDYIKATNAKDQATAETILHDMDVMRKLTKEK*
Ga0111541_100039466	3300008097	Marine	MNQSKVDDELKKLAMDYIKATNANDQSLAETILNDMQVMRELMKEK*
Ga0111541_100136661	3300008097	Marine	MNQSKVEDELKKLAMDYIKATNAKQHSTAESILHDMEVMRNLMKEK*
Ga0111541_100589753	3300008097	Marine	MNSINKTRVEDELKKLAMDYIKATNAKDLTLAETILHNMEELKKLTNA*
Ga0115011_102786874	3300009593	Marine	MNQSKVDEELKKLAMDYIKATNANDHSTAENILHDMEVMKNLMKEK*
Ga0115011_103904832	3300009593	Marine	SINKTRVEDELKKLAMDYIKATNAKDLTLAKTIMHNMEELKKLTDA*
Ga0115011_105348842	3300009593	Marine	MNSINKSRVEDELKKLAMDYIKATNAKDLTLAETILHNMEELKKLTNG*
Ga0115011_108422871	3300009593	Marine	MNQSKVDEELKKLAMDYIKATNANDHSTAESILHDMEVMKNLTKEK*
Ga0115011_121662933	3300009593	Marine	MNQAKIDEELKKLAMDYIIATNADNQALAETIMHNMEELKKLTHA*
Ga0115105_101289313	3300009679	Marine	MNQSKVEDELKKLAMDYIKATNAKDLTLAETILHNMEELKKLTNV*
Ga0115105_101938892	3300009679	Marine	MNSINKTRVEDELKKLAMDYIKATNAKDLTLAKTILHNMEELKKLTDA*
Ga0115105_103782766	3300009679	Marine	MNSINQSKVDDELKKLAMDYIKATNADDHALAEQILHDMEVMKNLTKEK*
Ga0115105_104585242	3300009679	Marine	MNQSKVDEELKKLAMDYIIATNADNQALAETIMHNMEELKKLTHA*
Ga0115105_105779102	3300009679	Marine	MNSINQSRVEDELKKLAMDYIKATNAKDLTLAKTIMHNMEELKKLTNG*
Ga0115105_113608153	3300009679	Marine	MNSINKTRVEDELKKLAMDYIKATNAKDLTLAETILHNMEELKKLTNG*
Ga0115012_103651004	3300009790	Marine	EDELKKLAMDYIKATNAKDLTLAKTIMTNMEELKKLTNA*
Ga0115012_105316701	3300009790	Marine	MNSINKTRVEDELKKLAMDYIKATNAKDLTLAKTIMHNMEELKKLTDA*
Ga0115012_113018794	3300009790	Marine	MNSINKTRVEDELKKLAMDYIKATNAKDLTLAKTIMTNMEELKKLT
Ga0138385_10246672	3300011324	Marine	MNQSKVDEELKKLAMDYIKATNADDQATAESILHDMEVMKNLTKEKQWHEPKGV*
Ga0163180_100501943	3300012952	Seawater	MNSINKSKVEDELKKLAMDYIKATNAKDLTLAETILHNMEELKKLTNG*
Ga0163179_109709282	3300012953	Seawater	MNSINKSKVEDELKKLAMDYIKATNAKDLTLAKTIMHNMEELKKLTNA*
Ga0163111_127775752	3300012954	Surface Seawater	MNQSKVDDELKKLAMDYIKATNAKDLTLAKTIMTNMEELKKLTNA*
Ga0181420_12336412	3300017757	Seawater	MNSINKTRVEDELKKLAMDYIKATNAKDLTLAKTIMHNMEELKKLTNG
Ga0181406_11668623	3300017767	Seawater	RVEDELKKLAMDYIKATNAKDLTLAKTILHNMEELKKLTDA
Ga0211586_10412771	3300020255	Marine	MNSINKSKVEDELKKLAMDYIKATNAKDLTLAKTIMTNMEELKKLTNA
Ga0211706_10572481	3300020345	Marine	MSSMNSMNQSKVEDELKKLAMDYINATNAKDISLAETILHNMEELKKLTNG
Ga0211706_11144922	3300020345	Marine	MNSKISTNQSKVDDELKKLAMDYIKATNDKDQTLAKTIMHNMEELKKLTHD
Ga0211497_100706212	3300020394	Marine	MNSINKSKVEDELKKLAMDYIKATNAKDLTLAKTIMNNMEELKKLTND
Ga0211705_100239795	3300020395	Marine	MNSINQSKVDDELKKLAMDYIKATNADDLSTAETILHNMEELKKLTHD
Ga0211705_100418605	3300020395	Marine	MNSISQSKVDEELRKLAMDYIKATNAKDQALAETILNDMEVMQKLMKEK
Ga0211587_104331001	3300020411	Marine	MNSINQSKVDDELKKLAMDYIKATNADDQALAETILNDMQVMKELTKEK
Ga0211644_102869614	3300020416	Marine	MNSINKSKVEDELKKLAMDYIKATNAKDLTLAETILHNMEELKKLTNA
Ga0211521_102077542	3300020428	Marine	MNSINKSKLEDELKKLAMDYIKATNAKDLTLAKTIMTNMEELKKLTNG
Ga0211576_1000036037	3300020438	Marine	MNSINQSRVEDELKKLAMDYIKATNAKDLTLAKTIMHNMEELKKLTNG
Ga0211564_100645042	3300020445	Marine	MTSINKSKIEEELKKLAMDYIDATNKKRVAEATAILANMEELKKLTND
Ga0211564_100963265	3300020445	Marine	MNSINQSKVDDELKKLAMDYIKATNADDHALAEQILHDMEVMKNLMKEK
Ga0211564_100983697	3300020445	Marine	RVEDELKKLAMDYIKATNAKDLTLAETILHNMEELKKLTNG
Ga0211564_101008432	3300020445	Marine	MNSMNQSKVDDELKKLAMDYIKATNANDQALAETIMHNMEELKKLTHA
Ga0211564_102927332	3300020445	Marine	MNQSKVDEELKKLAMDYIIATNADNQALAETIMHNMEELKKLTHA
Ga0211564_103279483	3300020445	Marine	MKMSLKNSTNQQKVDDELKKLAMEYINATNANNQSLAETIMHNMEELKKLTSD
Ga0211642_101268712	3300020449	Marine	MNSMNKSKVEDELKKLAMDYIKATNAKDLTLAENILHNMEELKKLTNA
Ga0211642_103210563	3300020449	Marine	KVEDELKKLAMDYIKATNAKDLTLAKTIMTNMEELKKLTNA
Ga0211641_102436714	3300020450	Marine	MNSMNKAKVEDELKKMALEYIKATNANNITLAESILNNMEELKRITNA
Ga0211545_102304092	3300020452	Marine	MNSINKTRVEDELKKLAMDYIKATNAKDLALAKTILHNMEELKKLTDA
Ga0211643_105252541	3300020457	Marine	MNSINKSKVEDELKKLAMDYIKATNAKDLTLAKTIMTNMEELKKL
Ga0211640_100013694	3300020465	Marine	MNSMNKAKVEDELKKMALDYIKATNANNITLAESILNNMEELKRITNA
Ga0211713_104011622	3300020467	Marine	MKMSLKSTTNQQKVDDELKKLAMEYIKATNANDLSLAETIMHNMEELKKLTSD
Ga0211713_106450001	3300020467	Marine	MNSMNQSKVEDELKKLAMDYIKATNAKDLTLAETILHNMEELKKLTNG
Ga0211543_100968171	3300020470	Marine	MNQSKVDEELKKLAMDYIKATNANDQATAENILHDMEVMKNLTKEKQWHEPKGA
Ga0211614_104066023	3300020471	Marine	INKSKVEDELKKLAMDYIKATNAKDLTLAETILHNMEELKKLTNA
Ga0211579_1000740816	3300020472	Marine	MNQSKVDDELKKLAMEYIKATNDKDLTLAKTIMHNMEELKKLTDD
Ga0211579_100425446	3300020472	Marine	MKMSLKSTTNQQKVDDELKKLAMEYIKATNANDIALAETIMHNMEELKKLTDA
Ga0211579_100498702	3300020472	Marine	MNSISQSKVDEELKKLAMDYIKATNAKDQALAETILNDMEVMKKLMKEK
Ga0211579_100839345	3300020472	Marine	MNSINKTRVEDELKKLAMDYIKATNAKDLTLAKTILHNMEELKKLTDA
Ga0211579_101022133	3300020472	Marine	MNSINKTRVEDELKKLAMDYIKATNAKDLTLAETILHNMEELKKLTNG
Ga0211579_102325994	3300020472	Marine	MNSINQSKVDEELKKLAMDYIKATNANDHSTAENILHDMEVMKNLMKEK
Ga0211579_102437754	3300020472	Marine	MNSMNQSKVDEELKKLAMDYIKATNANDQATAETIMHNMEELKKLTHA
Ga0211579_103999233	3300020472	Marine	MNSMNQSKVDEELKKLAMDYIKATNAKDHSLAENILHDMEVMKNLTKQK
Ga0211579_104787503	3300020472	Marine	MNSINQSKVDDELKKLAMDYIKATNADDHALAEQILHDMEVMKNLTKEK
Ga0211579_105272942	3300020472	Marine	MNSMNQSKVDEELKKLAMDYIKATNAKDQATAETILHDMDVMRKLTKEK
Ga0211541_104346683	3300020475	Marine	MKMSLKNSTNQQKVDDELKRLAMDYINATNANDQSLAETIMHNMEELKKLTDG
Ga0211503_104947672	3300020478	Marine	MNSISQSKVDEELKKLAMDYIKATNANDQATAENILHDMQVMRDLMKEK
Ga0211503_107434112	3300020478	Marine	MNSMNQSKVDEELKKLAMDYIKATNANDQATAENILHDMEVMKNLTREKQWHEPKGV
Ga0208011_10440602	3300025096	Marine	MNQAKVDEELKKLAMDYIIATNADNHALAEAIMHNMEELKKLTHA
Ga0208261_100150620	3300026076	Marine	MSYMNSMNQSKVDDELKKLAMDYIKATNANDQSLAETILNDMQVMRELMKEK
Ga0208261_10132711	3300026076	Marine	MNSINKTRVEDELKKLAMDYIKATNAKDLTLAETILHNMEELKKLTNA
Ga0208749_10473221	3300026077	Marine	MNSMNKSKVEDELKKLAMDYIKATNAKNLTLAETILHNMEELKKLTDA
Ga0208749_10477881	3300026077	Marine	MNSINKSKVEDELKKLAMDYIKATNAKDLTLAKTIMHNMEELKKLTNA
Ga0208749_10719541	3300026077	Marine	KKLAMDYIKATNAKDLTLAKTIMTNMEELKKLTNA
Ga0208749_10743511	3300026077	Marine	MNSINKSKVDEELKKLAMDYIKATNANDLSTAETILHNMEELKKLTHA
Ga0208276_100117411	3300026166	Marine	MNSMNQSKVDEALKKLAMDYIKATNAKDHSLAENILHDMEVMKNLTKEK
Ga0208276_10226482	3300026166	Marine	MNQSKVDEELKKLAMDYIIATNANNQALAETIMHNMEELKKLTHA
Ga0208276_10359833	3300026166	Marine	MNSMNQSKVDEELKKLAMDYIIATNANDQALAETIMHNMEELKKLTHA
Ga0208407_10636195	3300026257	Marine	MNQAKVDEELKKLAMDYIIATNADNQALAETIMHNMEELKKLTHA
Ga0208408_101260913	3300026260	Marine	MTLKNSMNQAKVDEELKKLAMDYIIATNADNHALAEAIMHNMEELKKLTHA
Ga0208764_103757053	3300026321	Marine	LKNSMNQSKVDEELKKLAMDYIIATNANNQALAETIMHNMEELKKLTHA
Ga0209404_100592239	3300027906	Marine	FLIQMNLKNSTNQSKVDDELKKLAMEYIKATNDKDQTLAKTIMHNMEELKKLTHD
Ga0209404_101116421	3300027906	Marine	EDELKKLAMDYIKATNAKDLTLAKTIMHNMEELKKLTNG
Ga0209404_101151753	3300027906	Marine	MNSINQSRVEDELKKLAMDYIKATNAKDLTLAKTIMHNMEELKKLTNA
Ga0209404_101913902	3300027906	Marine	MNSINKSRVEDELKKLAMDYIKATNAKDLTLAETILHNMEELKKLTNG
Ga0209404_105207402	3300027906	Marine	MTLKNSTNQSKVDDELKKLAIEYIKATNGKDQELAQTIMHNMEELKKLTDA
Ga0209404_109322733	3300027906	Marine	MNSINQSKVDDELKKLAMDYIKATNADNHALAETIMHNMEELKKLTHD
Ga0315331_106517243	3300031774	Seawater	MNSMNQSKVDDELKKLAMDYIKATNANDQSLAETIMHNMEELKKLTHD
Ga0310344_102300181	3300032006	Seawater	MNSMNQSKVDEELKKLAMDYIKATNANDQATAENILHDMDVMRKLTKEK
Ga0310344_102472514	3300032006	Seawater	MNSINQSKVDEELKKMAMDYIKATNAKQHATAESILHDMEVMKNLMKEK
Ga0310344_103133195	3300032006	Seawater	MNQSKVDDELKKLAMDYIKATNANDQSLAETIMHNMEELKKLTHA
Ga0310344_117531262	3300032006	Seawater	MNQSKVDEELKKLAMDYIKATNANDLSTAETILHNMEELKKLTHA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084708

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences