Metagenome / Metatranscriptome Family F084707

Overview

Basic Information

• Family ID: F084707
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 112
• Average Sequence Length: 38 residues
• Representative Sequence: MDVFEEIVIFVVSNGYYFAAIPFVIGIIGAILKAYEVF
• Number of Associated Samples: 72
• Number of Associated Scaffolds: 112

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 21.43 %
• % of genes near scaffold ends (potentially truncated): 8.93 %
• % of genes from short scaffolds (< 2000 bps): 84.82 %
• Associated GOLD sequencing projects: 68
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (89.286 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine (33.929 % of family members)
• Environment Ontology (ENVO): Unclassified (95.536 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline) (88.393 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 48.48%
  β-sheet: 0.00%
  Coil/Unstructured: 51.52%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00565	SNase	32.14
PF01618	MotA_ExbB	22.32
PF01521	Fe-S_biosyn	1.79
PF13640	2OG-FeII_Oxy_3	1.79
PF07992	Pyr_redox_2	0.89
PF07460	NUMOD3	0.89
PF06414	Zeta_toxin	0.89
PF01592	NifU_N	0.89
PF05992	SbmA_BacA	0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	1.79
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	1.79
COG0822	Fe-S cluster assembly scaffold protein IscU, NifU family	Posttranslational modification, protein turnover, chaperones [O]	0.89

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.29 %
All Organisms	root	All Organisms	10.71 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.29 %
cellular organisms	root	All Organisms → cellular organisms	8.93 %
Viruses	superkingdom	All Organisms → Viruses	1.79 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.29 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	7.14 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.79 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.46 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	1.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.79 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.29 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1.79 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.29 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.79 %
Thaumarchaeota incertae sedis	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis	1.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.29 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.79 %
Marine Group I	clade	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I	1.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.29 %
Marine Group I thaumarchaeote	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	1.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.79 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000140|LPfeb09P26500mDRAFT_c1008733	Not Available	1363
3300000163|LPjun09P162000mDRAFT_c1023237	Not Available	962
3300000219|LPfeb10P161000mDRAFT_c1062158	Not Available	575
3300000222|LPjun09P12500mDRAFT_1016212	Not Available	1548
3300000264|LP_A_09_P04_500DRAFT_1017847	Not Available	946
3300001683|GBIDBA_10084189	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	1043
3300001781|Deep_1025801	All Organisms → cellular organisms → Bacteria	1475
3300005604|Ga0066852_10248075	Not Available	605
3300005948|Ga0066380_10057201	Not Available	1110
3300005953|Ga0066383_10030772	Not Available	1748
3300005953|Ga0066383_10197006	Not Available	596
3300005969|Ga0066369_10234948	Not Available	594
3300006013|Ga0066382_10112566	Not Available	950
3300006166|Ga0066836_10414119	Not Available	813
3300006304|Ga0068504_1124012	Not Available	1225
3300006306|Ga0068469_1177090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1032
3300006306|Ga0068469_1179338	Not Available	642
3300006306|Ga0068469_1182561	Not Available	568
3300006308|Ga0068470_1100212	Not Available	4816
3300006308|Ga0068470_1131146	Not Available	1229
3300006308|Ga0068470_1169898	Not Available	1865
3300006308|Ga0068470_1444652	Not Available	896
3300006308|Ga0068470_1458351	All Organisms → cellular organisms → Bacteria → Proteobacteria	814
3300006309|Ga0068479_1100129	Not Available	664
3300006309|Ga0068479_1213384	Not Available	537
3300006310|Ga0068471_1081205	Not Available	4478
3300006310|Ga0068471_1228125	Not Available	4032
3300006310|Ga0068471_1239044	Not Available	3789
3300006310|Ga0068471_1270928	Not Available	3166
3300006310|Ga0068471_1376317	Not Available	2041
3300006310|Ga0068471_1489947	Not Available	1952
3300006310|Ga0068471_1502760	Not Available	2857
3300006311|Ga0068478_1132407	Not Available	1235
3300006313|Ga0068472_10479344	Not Available	1015
3300006324|Ga0068476_1200966	All Organisms → cellular organisms → Bacteria → Proteobacteria	848
3300006324|Ga0068476_1226576	Not Available	1232
3300006325|Ga0068501_1099356	Not Available	2260
3300006325|Ga0068501_1161346	Not Available	1132
3300006325|Ga0068501_1269046	Not Available	662
3300006335|Ga0068480_1115964	Not Available	1281
3300006335|Ga0068480_1309193	All Organisms → Viruses → Predicted Viral	1508
3300006336|Ga0068502_1925051	Not Available	621
3300006338|Ga0068482_1347935	Not Available	3461
3300006339|Ga0068481_1212137	Not Available	4152
3300006339|Ga0068481_1212138	Not Available	1783
3300006339|Ga0068481_1251861	Not Available	992
3300006339|Ga0068481_1359204	Not Available	3046
3300006339|Ga0068481_1425620	Not Available	1021
3300006339|Ga0068481_1436314	Not Available	1430
3300006339|Ga0068481_1444335	Not Available	1346
3300006340|Ga0068503_10200811	Not Available	5225
3300006340|Ga0068503_10401423	Not Available	1463
3300006340|Ga0068503_10498468	Not Available	1580
3300006340|Ga0068503_10579240	Not Available	1197
3300006340|Ga0068503_10654305	Not Available	607
3300006340|Ga0068503_10668579	All Organisms → Viruses → Predicted Viral	1036
3300006341|Ga0068493_10513941	Not Available	1515
3300006344|Ga0099695_1122510	Not Available	1553
3300006346|Ga0099696_1101870	Not Available	892
3300006414|Ga0099957_1074472	All Organisms → cellular organisms → Bacteria → Proteobacteria	1710
3300006414|Ga0099957_1132357	Not Available	1638
3300006416|Ga0100043_10585706	Not Available	989
3300006416|Ga0100043_10711446	Not Available	1404
3300006753|Ga0098039_1040877	Not Available	1635
3300006900|Ga0066376_10169957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1321
3300006900|Ga0066376_10501450	Not Available	685
3300006902|Ga0066372_10600628	Not Available	655
3300006902|Ga0066372_10747123	Not Available	590
3300007160|Ga0099959_1306227	All Organisms → cellular organisms → Bacteria → Proteobacteria	751
3300007291|Ga0066367_1033741	Not Available	1767
3300007756|Ga0105664_1141090	Not Available	549
3300009173|Ga0114996_10072166	Not Available	3012
3300009420|Ga0114994_10070009	Not Available	2398
3300009425|Ga0114997_10091915	Not Available	1865
3300009544|Ga0115006_12232280	Not Available	505
3300009595|Ga0105214_102529	Not Available	963
3300009622|Ga0105173_1007541	Not Available	1467
3300009622|Ga0105173_1020577	Not Available	995
3300009705|Ga0115000_10093610	Not Available	2025
3300017779|Ga0181395_1192156	Not Available	636
3300020263|Ga0211679_1036630	Not Available	901
3300020286|Ga0211624_1055162	Not Available	539
3300020290|Ga0211698_1073896	Not Available	522
3300020389|Ga0211680_10132533	Not Available	1005
3300020399|Ga0211623_10131973	Not Available	868
3300021065|Ga0206686_1161903	Not Available	653
3300021087|Ga0206683_10222139	Not Available	985
3300021359|Ga0206689_10488820	Not Available	687
3300021442|Ga0206685_10001496	Not Available	7055
3300021442|Ga0206685_10325704	Not Available	523
3300021791|Ga0226832_10385617	Not Available	587
3300025052|Ga0207906_1028349	Not Available	772
3300025128|Ga0208919_1245796	Not Available	521
3300025188|Ga0207913_1027429	Not Available	895
3300026092|Ga0207965_1051873	Not Available	905
3300026103|Ga0208451_1046361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	539
3300027622|Ga0209753_1028034	Not Available	1708
3300027810|Ga0209302_10466786	Not Available	563
3300027827|Ga0209035_10098627	Not Available	1443
3300027827|Ga0209035_10561338	Not Available	547
3300028487|Ga0257109_1100236	Not Available	881
3300028487|Ga0257109_1222132	Not Available	527
3300031757|Ga0315328_10438691	Not Available	756
3300031766|Ga0315322_10766637	Not Available	600
3300031801|Ga0310121_10012394	Not Available	6574
3300031801|Ga0310121_10217942	Not Available	1153
3300031886|Ga0315318_10189053	Not Available	1172
3300032032|Ga0315327_10993771	Not Available	501
3300032278|Ga0310345_11052944	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Thaumarchaeota incertae sedis → Marine Group I → Marine Group I thaumarchaeote	795
3300032278|Ga0310345_11619941	Not Available	632
3300032820|Ga0310342_101566482	Not Available	785
3300032820|Ga0310342_103485263	Not Available	519

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Type

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	84.82%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	7.14%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.46%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	2.68%
Strait	Environmental → Aquatic → Marine → Strait	0.89%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	34.82%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	34.82%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	15.18%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	7.14%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.46%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	1.79%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.89%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.89%

Habitat

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	33.93%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	22.32%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	15.18%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	7.14%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.46%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	3.57%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	3.57%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	3.57%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	1.79%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.89%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.89%
Background Seawater	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater	0.89%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.89%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.89%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000140	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - February 2009 P26 500m	Environmental
3300000163	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P16 2000m	Environmental
3300000219	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - February 2010 P16 1000m	Environmental
3300000222	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - June 2009 P12 500m	Environmental
3300000264	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_A_09_P04_500	Environmental
3300001683	Hydrothermal vent plume microbial communities from Guaymas Basin, Gulf of California - IDBA assembly	Environmental
3300001781	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Deep Sites	Environmental
3300005604	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63	Environmental
3300005948	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_O2min_ad_571m_LV	Environmental
3300005953	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_Bottom_ad_3770_LV_A	Environmental
3300005969	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_Bottom_ad_4513_LV_A	Environmental
3300006013	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_NADW_ad_2500m_LV_B	Environmental
3300006166	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV91	Environmental
3300006304	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_1000m	Environmental
3300006306	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_1_0500m	Environmental
3300006308	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500m	Environmental
3300006309	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0500m	Environmental
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental
3300006311	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_1000m	Environmental
3300006313	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770m	Environmental
3300006324	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0500m	Environmental
3300006325	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_0500m	Environmental
3300006335	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_2_0500m	Environmental
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental
3300006338	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_1_0770m	Environmental
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental
3300006341	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT236_2_0770m	Environmental
3300006344	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0500m	Environmental
3300006346	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_0770m	Environmental
3300006414	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0500m	Environmental
3300006416	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0770m	Environmental
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental
3300007160	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_1000m	Environmental
3300007291	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_AAIW_ad_750m_LV_A	Environmental
3300007756	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDBack_2015_DNA CLC_assembly	Environmental
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental
3300009544	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean- Svalbard ARC20M Metagenome	Environmental
3300009595	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3635_2500	Environmental
3300009622	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155	Environmental
3300009705	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_128	Environmental
3300017779	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16	Environmental
3300020263	Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX555942-ERR599125)	Environmental
3300020286	Marine microbial communities from Tara Oceans - TARA_B100000470 (ERX556011-ERR599131)	Environmental
3300020290	Marine microbial communities from Tara Oceans - TARA_B100000749 (ERX556131-ERR599154)	Environmental
3300020389	Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX556139-ERR599008)	Environmental
3300020399	Marine microbial communities from Tara Oceans - TARA_B100000470 (ERX555969-ERR598947)	Environmental
3300021065	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 500m 12015	Environmental
3300021087	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 80m 12015	Environmental
3300021359	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015 (Metagenome Metatranscriptome)	Environmental
3300021442	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015	Environmental
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental
3300025052	Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)	Environmental
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental
3300025188	Marine microbial communities from the Deep Atlantic Ocean - MP2913 (SPAdes)	Environmental
3300026092	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_O2min_ad_571m_LV (SPAdes)	Environmental
3300026103	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155 (SPAdes)	Environmental
3300027622	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_550m (SPAdes)	Environmental
3300027810	Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome (SPAdes)	Environmental
3300027827	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - AAIW_A/KNORR_S2/LV (SPAdes)	Environmental
3300028487	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_2000m	Environmental
3300031757	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315	Environmental
3300031766	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 21515	Environmental
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental
3300032032	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315	Environmental
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LPfeb09P26500mDRAFT_10087333	3300000140	Marine	MDVFEEIVIFVFSYGYIFASIPFVLGIIGAVLKAYEVF*
LPjun09P162000mDRAFT_10232373	3300000163	Marine	MDVFEEIVIFVFSYGYIFAAIPFVLGIIGAILKAHQVF*
LPfeb10P161000mDRAFT_10621582	3300000219	Marine	MDVFEEIVIFVFSYGYVFAAIPFVLGIIGAILKANEVF*
LPjun09P12500mDRAFT_10162124	3300000222	Marine	MGVFETLEEVVIFVVSYGYYFAAIPFIIGIIGAVLKAYEVF*
LP_A_09_P04_500DRAFT_10178473	3300000264	Marine	MDVFEEIVIFVFSYGYVFASIPFVIGILGAILKAYEVF*
GBIDBA_100841893	3300001683	Hydrothermal Vent Plume	MDVFEEIVIFVVSNGYYFASIPFVIGIIGAVLKAHEVF*
Deep_10258011	3300001781	Hydrothermal Vent Plume	MNVFEEVVIFVFSYGYIIAAIPFGLGIIGAVVFN*
Ga0066852_102480752	3300005604	Marine	MKLKGVYDTIEEIVIFVVSYGYYFASIPFILGILGAIILD*
Ga0066380_100572012	3300005948	Marine	MDVFEETVIFVVSYGYFFAAIPFAIGILGAILKANEVF*
Ga0066383_100307721	3300005953	Marine	FEEIVIFVVSNGYYFASIPFIIGIIGAILKANQVF*
Ga0066383_101970061	3300005953	Marine	MGVFEEVVIFVFTYGYIFAAIPFVLGIIGAILKAHQVF*
Ga0066369_102349482	3300005969	Marine	MDVFEEIVIFVFSYGYIFAAIPFILGIIGAIVLN*
Ga0066382_101125663	3300006013	Marine	MDVFEEIVIFVVSNGYYFAAIPFVIGTIAAVLKAYEVF*
Ga0066836_104141193	3300006166	Marine	MKLKGVYDTIEEIVIFVVSYGYYFAAIPFILGILGAIILD*
Ga0068504_11240123	3300006304	Marine	MGVFEEIVIFVFTYGYIFAAIPFVLGIIGAIVLN*
Ga0068469_11770901	3300006306	Marine	MDVFEEIVIFVVSNGYYFASIPFVIGTIAAVLKAYEVF*
Ga0068469_11793382	3300006306	Marine	MKLMDVFEETVIFVVSYGYFFAAIPFAIGILGAILKAHEVF*
Ga0068469_11825612	3300006306	Marine	MDVFEEIVIFVFSYGYVFAAIPFVLGIIGAILKAYEVF*
Ga0068470_11002127	3300006308	Marine	MDVFEEIVIFVVSNGYYFASIPFVVGTIAAILKAYEVF*
Ga0068470_11311463	3300006308	Marine	MRLMDVFEETVIFVVSYGYFFAAIPFAIGILGAILKANEVF*
Ga0068470_11698984	3300006308	Marine	MRLMDVFEETVIFIVSYGYFFAAIPFAIGILGAILKAHEVF*
Ga0068470_14446523	3300006308	Marine	MGVFDTLEEIIIFVVSYGYYFASIPFILGIIGAIVLN*
Ga0068470_14583513	3300006308	Marine	MKLMDVFEETVIFVVSYGYYFAAIPFVLGIIGAIVLN*
Ga0068479_11001293	3300006309	Marine	MDVFEETVIFVVSYGYFFAAIPFAIGILGAILKAHEVF*
Ga0068479_12133842	3300006309	Marine	MDVFEEIVIFVVSNGYYFAAIPFVIGIIGAILKAYEVF*
Ga0068471_10812053	3300006310	Marine	MDVFEEIVIFIVSNGYYFASIPFVIGTIAAVLKAYEVF*
Ga0068471_12281255	3300006310	Marine	MDVFEEIVIFVFSYGYIFAAIPFVLGFIGAIVLN*
Ga0068471_12390448	3300006310	Marine	MGAFDTLEEIIIFVVSYGYYFAAIPFVLGIIGAIVLN*
Ga0068471_12709289	3300006310	Marine	MAVFDYIEETVIFVVSYGYYFAAIPFILGIIGAILKANEVF*
Ga0068471_13763173	3300006310	Marine	MKLMDVFEETVIFVVSYGYFFAAIPFTIGILGAILKAYEVF*
Ga0068471_14899473	3300006310	Marine	MDVFEEIVIFVVSNGYYFASIPFVIGIIGAILKAHEVF*
Ga0068471_15027605	3300006310	Marine	MDVFEEIVIFVVSYGYYFAAIPFILGIIGAIVLN*
Ga0068478_11324073	3300006311	Marine	MGVFEEIVIFVVSYGYIFAAIPFVLGIIGAIVLN*
Ga0068472_104793442	3300006313	Marine	MDVFEEIVIFVFSYGYVFAAIPFVLGIIGAIVLN*
Ga0068476_12009663	3300006324	Marine	TRLMAVFDYIEEIVIFVVSYGYYFAAIPFVLGIIGAIVLN*
Ga0068476_12265762	3300006324	Marine	MDVFEEIVIFVVSHGYYFAAIPFAIGILGAILKANEVF*
Ga0068501_10993563	3300006325	Marine	MDVFEEIVIFVFSYGYIFASIPFFLGTIAAVLKAYEVF*
Ga0068501_11613463	3300006325	Marine	MAVFDYIEETVIFVVSYGYYFAAIPFVLGIIGAIVLN*
Ga0068501_12690462	3300006325	Marine	MDVFEEIVIFVFSYGYVFASIPFVLGIIGAILKAHEVF*
Ga0068480_11159643	3300006335	Marine	MDVFEEIVIFVFSYGYVFAAIPFVIGILGAILKANEVF*
Ga0068480_13091933	3300006335	Marine	MGVFDTLEEIIIFIVSYGYYFAAIPFILGIIGAIVLN*
Ga0068502_19250511	3300006336	Marine	MDVFEEIIIFVVSNGYYFAAIPFVIGVIGAILKAYEVF*
Ga0068482_13479355	3300006338	Marine	MDVFEEVIIFVVSHGYYFAAIPFVLGIIGAVLKAYEVF*
Ga0068481_12121374	3300006339	Marine	MDVFEEIVIFVVSHGYYFAAIPFVIGTIAAILKAYEVF*
Ga0068481_12121383	3300006339	Marine	MDVFEEIVIFVVSYGYYFAAIPFVIGTIAAILKAHEVF*
Ga0068481_12518612	3300006339	Marine	MDVFEEIVIFVFSYGYVFASIPFVLGILGAILKAYEVF*
Ga0068481_13592043	3300006339	Marine	MAVFDYIEETVIFVVSYGYYFASIPFILGIIGAIVLN*
Ga0068481_14256203	3300006339	Marine	MDVFEETVMFVVSYGYFFAAIPFVIGTIAAILKAHEGF*
Ga0068481_14363142	3300006339	Marine	MDVFEEIVIFIVSYGYNFAAIPFVLGIIGAIVLN*
Ga0068481_14443352	3300006339	Marine	MDVFEETIIFIVSYGYYFAAIPFVLGIIGAIVLN*
Ga0068503_1020081110	3300006340	Marine	MDVFEEIVIFVVSYGYIFAAIPFVLGIIGAIVLN*
Ga0068503_104014232	3300006340	Marine	MDVFEEIVIFVFSYGYIFASIPFVLGIIGAILKAYEVF*
Ga0068503_104984682	3300006340	Marine	MDVFEETVIFIVSYGYFFAAIPFVIGIIGAVLKAYEVF*
Ga0068503_105792403	3300006340	Marine	MDVFEEIVIFVFSYGYIFAAIPFVLGIIGAILKANEVF*
Ga0068503_106543051	3300006340	Marine	MDVFEEIVIFVVSYGYYFASIPFVIGIIGAILKAHE
Ga0068503_106685792	3300006340	Marine	MGVFEEIVIFVFSYGYIFASIPFVLGIIGAVLKAYEVF*
Ga0068493_105139411	3300006341	Marine	TKLMDVFEEIVIFVFSYGYVFAAIPFVLGIIGAILKANEVF*
Ga0099695_11225103	3300006344	Marine	MDVFEEIVIFVVSNGYYFASIPFVIGTIAAILKAHEVF*
Ga0099696_11018702	3300006346	Marine	MDVFEEIVIFVFSYGYIFAAIPFVLGIIGAILKAYEVF*
Ga0099957_10744724	3300006414	Marine	MDVFEETVIFVVSYGYYFAAIPFVLGIIGAIVLN*
Ga0099957_11323572	3300006414	Marine	MDVFEEIVIFVVSHGYYFAAIPFVVGTIAAILKAYEVF*
Ga0100043_105857062	3300006416	Marine	MDVFEEIVIFVFSYGYIFAAIPFVLGIIGAIVLN*
Ga0100043_107114463	3300006416	Marine	MDVFEEIVIFVVSNGYYFAAIPFVIGIIGAILKANEVF*
Ga0098039_10408773	3300006753	Marine	MGVFDTFEEIIIFVVSYGYYFAAIPFVLGIIGAIVLN*
Ga0066376_101699574	3300006900	Marine	MGVFEEVFIFIVSHGWYFASIPFVLGIIGAILKANEVF*
Ga0066376_105014501	3300006900	Marine	MDVFEEIVIFVFSYGYIFAAIPFVLGIIGAILKAHEVF*
Ga0066372_106006281	3300006902	Marine	MAVFDYIEETVIFVVSYGYYFAAIPFILGIIGAIVLN*
Ga0066372_107471233	3300006902	Marine	MAVFDLIEETVIFVVSYGYYFAAIPFVLGIIGAIILN*
Ga0099959_13062273	3300007160	Marine	MDVFEEIVIFVFSYGYIFAAIPFVLGIIGAILKANQVF*
Ga0066367_10337413	3300007291	Marine	MDVFEEIVIFVVSNGYYFAAIPFVIGIIGAVLKAYEVF*
Ga0105664_11410902	3300007756	Background Seawater	MDVFEETVIFVVSYGYFFAAIPFAIGILGAVLKAYEVF*
Ga0114996_100721667	3300009173	Marine	MGVFEEILIFIVSYGYFFAAIPFVIGIIGAILKANEVF*
Ga0114994_100700094	3300009420	Marine	MGVFEEIIIFIISYGYYFTAIPFVLGIIGAILKANEVF*
Ga0114997_100919155	3300009425	Marine	MGVFEEIIIFIVSYGYFFAAIPFVIGIIGAILKANEVF*
Ga0115006_122322802	3300009544	Marine	VFEETVIFIVSYGYFFAAIPFAIGILGAILKAHEVF*
Ga0105214_1025293	3300009595	Marine Oceanic	MDVFEEIVIFVVSNGYYFASIPFIIGIIGAILKAHQVF*
Ga0105173_10075412	3300009622	Marine Oceanic	MNIFEEVVIFIFSYGYIFAAIPFGLGIIGAIVLN*
Ga0105173_10205772	3300009622	Marine Oceanic	MDIFEEVVIFVFSYGYIIAAIPFGLGIIGAVVFN*
Ga0115000_100936103	3300009705	Marine	MGVFEEIIIFIISYGYFFAAIPFVIGIIGAILKANEVF*
Ga0181395_11921562	3300017779	Seawater	MNLMDVFEETVIFIVSYGYYFAAIPFVIGTIAAILKAHEVF
Ga0211679_10366302	3300020263	Marine	MDVFEETVIFVVSYGYFFAAIPFAIGILGAILKAHEVF
Ga0211624_10551622	3300020286	Marine	MDVFEEIVIFVVSNGYYFAAIPFVIGIIGAVLKAYEVF
Ga0211698_10738962	3300020290	Marine	MDVFEEIVIFVVSNGYYFAAIPFVIGIIAAVLKAYEVF
Ga0211680_101325332	3300020389	Marine	MDVFEETVIFVVSYGYFFAAIPFAIGILGAILKANEVF
Ga0211623_101319732	3300020399	Marine	MRLMDVFEETVIFIVSYGYFFAAIPFAIGILGAILKAHEVF
Ga0206686_11619032	3300021065	Seawater	MDVFEEIVIFVFSYGYVFASIPFVIGILGAILKAYEVF
Ga0206683_102221393	3300021087	Seawater	MDVFEEIVIFVVSHGYYFAAIPFVLGTIAAILKAYEVF
Ga0206689_104888201	3300021359	Seawater	VFEEIVIFVFSYGYVFASIPFVIGILGAILKAYEVF
Ga0206685_100014963	3300021442	Seawater	MAVFDYIEETVIFVVSYGYYFASIPFVIGIIGAILKAHEVF
Ga0206685_103257043	3300021442	Seawater	MDVFEEIVIFVFSYGYVFAAIPFVLGIIGAILKANEVF
Ga0226832_103856172	3300021791	Hydrothermal Vent Fluids	MKLKGVYDTIEEIVIFVVSYGYYFASIPFILGILGAIILD
Ga0207906_10283492	3300025052	Marine	MDVFEEIVIFVFSYGYIFASIPFVLGIIGAVLKAYEVF
Ga0208919_12457962	3300025128	Marine	MKLKGVYDTIEEIVIFVVSYGYYFAAIPFILGILGAIILD
Ga0207913_10274292	3300025188	Deep Ocean	MDVFEEIVIFVVSNGYYFASIPFIIGIIGAILKANQVF
Ga0207965_10518733	3300026092	Marine	MKLMDVFEETVIFVVSYGYFFAAIPFAIGILGAILKANEVF
Ga0208451_10463612	3300026103	Marine Oceanic	MGVFEEVFIFIVSHGWYFASIPFVLGIIGAILKANEVF
Ga0209753_10280343	3300027622	Marine	MAVFDYIEETVIFVVSYGYYFASIPFILGIIGAIVLN
Ga0209302_104667861	3300027810	Marine	FEEIIIFIVSYGYFFAAIPFVIGIIGAILKANEVF
Ga0209035_100986271	3300027827	Marine	MDVFEEIVIFVVSNGYYFAAIPFVIGTIAAVLKAYEVF
Ga0209035_105613381	3300027827	Marine	MDVFEEIVIFVVSNGYYFAAIPFVIGIIGAVLKAYEV
Ga0257109_11002363	3300028487	Marine	LMDVFEEIVIFVFSYGYIFAAIPFVLGIIGAILKAHQVF
Ga0257109_12221321	3300028487	Marine	VFEEIVIFVFSYGYIFAAIPFVLGIIGAILKANQVF
Ga0315328_104386913	3300031757	Seawater	MDVFEEIVIFVVSYGYYFAAIPFVIGTIAAILKAHEVF
Ga0315322_107666372	3300031766	Seawater	MKLMDVFEETIIFVVSYGYYFAAIPFVIGTIAAILKAHEVF
Ga0310121_1001239410	3300031801	Marine	MRLMDVFEETVIFVVSYGYFFAAIPFAIGILGAILKAHEVF
Ga0310121_102179422	3300031801	Marine	MDVFEEIVIFVVSNGYYFASIPFVIGTIAAILKAHEVF
Ga0315318_101890534	3300031886	Seawater	MDVFEEIVIFVVSNGYYFASIPFVIGIIGAILKAHEVF
Ga0315327_109937712	3300032032	Seawater	MDVFEEIVIFVVSNGYYFASIPFVIGTIAAVLKAYEVF
Ga0310345_110529443	3300032278	Seawater	MDVFEEIVIFIVSNGYYFASIPFVIGTIAAVLKAYEVF
Ga0310345_116199412	3300032278	Seawater	MDVFEETVIFIVSYGYFFAAIPFVIGTIAAVLKAYEVF
Ga0310342_1015664821	3300032820	Seawater	MDVFEEIVIFVVSHGYYFAAIPFVIGTIAAILKAHEVF
Ga0310342_1034852632	3300032820	Seawater	MDVFEETVIFIVSYGYFFAAIPFAIGILGAILKAHEVF