Metagenome / Metatranscriptome Family F084672

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084672
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	72 residues
Representative Sequence	MTNIRRGLLAGLLAGLLLAMLNFVTDGTPGRTLPDALHWFGITIADPTISRFSGFFLLIVLGGI
Number of Associated Samples	89
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	92.86 %
% of genes near scaffold ends (potentially truncated)	95.54 %
% of genes from short scaffolds (< 2000 bps)	97.32 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (29.464 % of family members)
Environment Ontology (ENVO)	Unclassified (35.714 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.357 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.26% β-sheet: 0.00% Coil/Unstructured: 46.74%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF07681	DoxX	5.36
PF01206	TusA	2.68
PF01208	URO-D	1.79
PF00440	TetR_N	1.79
PF03869	Arc	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	5.36
COG4270	Uncharacterized membrane protein	Function unknown [S]	5.36
COG0425	Sulfur carrier protein TusA (tRNA thiolation, molybdenum cofactor biosynthesis)	Translation, ribosomal structure and biogenesis [J]	2.68
COG0407	Uroporphyrinogen-III decarboxylase HemE	Coenzyme transport and metabolism [H]	1.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	95.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	93.75 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	25.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	25.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	25.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	25.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Ktedonobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter	25.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Ktedonobacter sp. 13_2_20CM_53_11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	25.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.89 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_117812538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	508	Open in IMG/M
3300002914\|JGI25617J43924_10045354	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1593	Open in IMG/M
3300005166\|Ga0066674_10308724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	743	Open in IMG/M
3300005166\|Ga0066674_10542531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	518	Open in IMG/M
3300005171\|Ga0066677_10485019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	710	Open in IMG/M
3300005172\|Ga0066683_10655882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	628	Open in IMG/M
3300005174\|Ga0066680_10407617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	863	Open in IMG/M
3300005176\|Ga0066679_10431232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	863	Open in IMG/M
3300005177\|Ga0066690_10519534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	800	Open in IMG/M
3300005178\|Ga0066688_10992928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	512	Open in IMG/M
3300005181\|Ga0066678_11000091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	542	Open in IMG/M
3300005434\|Ga0070709_11266831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	594	Open in IMG/M
3300005435\|Ga0070714_100884988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	867	Open in IMG/M
3300005447\|Ga0066689_10626249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	677	Open in IMG/M
3300005471\|Ga0070698_100405035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1298	Open in IMG/M
3300005471\|Ga0070698_101189629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	711	Open in IMG/M
3300005536\|Ga0070697_100165680	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300005555\|Ga0066692_10845388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	562	Open in IMG/M
3300005556\|Ga0066707_10863441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	556	Open in IMG/M
3300005561\|Ga0066699_10742074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	697	Open in IMG/M
3300005598\|Ga0066706_10598826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	875	Open in IMG/M
3300005598\|Ga0066706_11082569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	613	Open in IMG/M
3300006047\|Ga0075024_100819869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	522	Open in IMG/M
3300006052\|Ga0075029_101158042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	539	Open in IMG/M
3300006059\|Ga0075017_100513639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	910	Open in IMG/M
3300006059\|Ga0075017_101225132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	588	Open in IMG/M
3300006172\|Ga0075018_10420604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	683	Open in IMG/M
3300006791\|Ga0066653_10079383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1443	Open in IMG/M
3300006796\|Ga0066665_11366665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	546	Open in IMG/M
3300006800\|Ga0066660_10539352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	979	Open in IMG/M
3300007076\|Ga0075435_102023076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	506	Open in IMG/M
3300009038\|Ga0099829_10364470	All Organisms → cellular organisms → Bacteria → Proteobacteria	1191	Open in IMG/M
3300009038\|Ga0099829_11691082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	520	Open in IMG/M
3300009089\|Ga0099828_10254203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1576	Open in IMG/M
3300009090\|Ga0099827_11290949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	635	Open in IMG/M
3300009137\|Ga0066709_104020070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	535	Open in IMG/M
3300009137\|Ga0066709_104276606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	520	Open in IMG/M
3300009522\|Ga0116218_1316605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	698	Open in IMG/M
3300010048\|Ga0126373_11207493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	822	Open in IMG/M
3300010048\|Ga0126373_12623164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	562	Open in IMG/M
3300010108\|Ga0127474_1078892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	753	Open in IMG/M
3300010321\|Ga0134067_10153230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	824	Open in IMG/M
3300010325\|Ga0134064_10448824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	525	Open in IMG/M
3300010335\|Ga0134063_10314305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	756	Open in IMG/M
3300010336\|Ga0134071_10558396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	595	Open in IMG/M
3300010358\|Ga0126370_10930662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	787	Open in IMG/M
3300010359\|Ga0126376_10865561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	890	Open in IMG/M
3300010361\|Ga0126378_12475180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	593	Open in IMG/M
3300010376\|Ga0126381_100672058	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300010379\|Ga0136449_104469449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	514	Open in IMG/M
3300010387\|Ga0136821_1355027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	506	Open in IMG/M
3300011271\|Ga0137393_10744704	All Organisms → cellular organisms → Bacteria → Proteobacteria	839	Open in IMG/M
3300012096\|Ga0137389_11167734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	659	Open in IMG/M
3300012198\|Ga0137364_10168917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1591	Open in IMG/M
3300012198\|Ga0137364_10532388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	884	Open in IMG/M
3300012199\|Ga0137383_10437832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	958	Open in IMG/M
3300012199\|Ga0137383_10852578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	665	Open in IMG/M
3300012199\|Ga0137383_10920630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	638	Open in IMG/M
3300012200\|Ga0137382_10059382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2415	Open in IMG/M
3300012200\|Ga0137382_11128783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	559	Open in IMG/M
3300012201\|Ga0137365_10388493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1030	Open in IMG/M
3300012206\|Ga0137380_10320024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1387	Open in IMG/M
3300012206\|Ga0137380_10646036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	922	Open in IMG/M
3300012207\|Ga0137381_11128111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	674	Open in IMG/M
3300012208\|Ga0137376_11000187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	716	Open in IMG/M
3300012209\|Ga0137379_10401166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1280	Open in IMG/M
3300012209\|Ga0137379_11118418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	694	Open in IMG/M
3300012211\|Ga0137377_10427404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1263	Open in IMG/M
3300012349\|Ga0137387_10693836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	737	Open in IMG/M
3300012349\|Ga0137387_11171790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	544	Open in IMG/M
3300012356\|Ga0137371_10114288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2107	Open in IMG/M
3300012356\|Ga0137371_10197066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1577	Open in IMG/M
3300012357\|Ga0137384_10655753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	854	Open in IMG/M
3300012357\|Ga0137384_11094347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	639	Open in IMG/M
3300012361\|Ga0137360_10723727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	855	Open in IMG/M
3300012362\|Ga0137361_11059070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	731	Open in IMG/M
3300012975\|Ga0134110_10433206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	588	Open in IMG/M
3300016294\|Ga0182041_11421809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	637	Open in IMG/M
3300016341\|Ga0182035_12105938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	512	Open in IMG/M
3300016387\|Ga0182040_11050020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	681	Open in IMG/M
3300017657\|Ga0134074_1235549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	656	Open in IMG/M
3300017926\|Ga0187807_1226271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	610	Open in IMG/M
3300017928\|Ga0187806_1095898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	943	Open in IMG/M
3300017939\|Ga0187775_10103315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	960	Open in IMG/M
3300017961\|Ga0187778_10126571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1601	Open in IMG/M
3300017961\|Ga0187778_10278599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1079	Open in IMG/M
3300017966\|Ga0187776_10934414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	632	Open in IMG/M
3300018032\|Ga0187788_10095745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1068	Open in IMG/M
3300018431\|Ga0066655_10423811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	878	Open in IMG/M
3300018433\|Ga0066667_11193373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	662	Open in IMG/M
3300018468\|Ga0066662_12262551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	571	Open in IMG/M
3300018468\|Ga0066662_12497202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	545	Open in IMG/M
3300018468\|Ga0066662_12882912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	510	Open in IMG/M
3300018468\|Ga0066662_12882914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	510	Open in IMG/M
3300018482\|Ga0066669_11436001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	626	Open in IMG/M
3300021560\|Ga0126371_10476268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1396	Open in IMG/M
3300021860\|Ga0213851_1276860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	518	Open in IMG/M
3300025929\|Ga0207664_10356976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1294	Open in IMG/M
3300026312\|Ga0209153_1239580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	590	Open in IMG/M
3300026325\|Ga0209152_10470261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	511	Open in IMG/M
3300026550\|Ga0209474_10418456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	690	Open in IMG/M
3300026551\|Ga0209648_10022642	All Organisms → cellular organisms → Bacteria	5491	Open in IMG/M
3300026551\|Ga0209648_10149110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1849	Open in IMG/M
3300027497\|Ga0208199_1044768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	951	Open in IMG/M
3300027604\|Ga0208324_1216350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	504	Open in IMG/M
3300027875\|Ga0209283_10243356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1193	Open in IMG/M
3300027875\|Ga0209283_10444172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	841	Open in IMG/M
3300027882\|Ga0209590_10278966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1070	Open in IMG/M
3300027882\|Ga0209590_10622792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	693	Open in IMG/M
3300031057\|Ga0170834_101353318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_2_20CM_53_11	585	Open in IMG/M
3300031910\|Ga0306923_12024667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	584	Open in IMG/M
3300032261\|Ga0306920_102336677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	740	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.11%
Host-Associated	Host-Associated	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.07%
Aquatic	Environmental → Aquatic	8.04%
Plants	Host-Associated → Plants	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.07%
Sediment	Environmental → Aquatic → Sediment	4.46%
Freshwater	Environmental → Aquatic → Freshwater	3.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.46%
Loam	Environmental → Terrestrial → Soil → Loam	7.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.46%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.79%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	28.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.46%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.46%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%
Mine Drainage	Environmental → Aquatic → Freshwater → Groundwater → Mine Drainage	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.25%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.46%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.46%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.57%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.79%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.89%
Sediment	Environmental → Aquatic → Freshwater → Groundwater → Mine Drainage → Sediment	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010108	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010387	Acid mine drainage microbial communities from Malanjkhand copper mine, India - M8 k-mer 51	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1178125381	3300002568	Soil	MQTIRRGLVAGLLAGLVLATLDFVTDGTPGSALPAALHWFGITIADPTISRFAGFFLLLVLGG
JGI25617J43924_100453542	3300002914	Grasslands Soil	VSIRLFPFSLNYLTGALAGLLAGLVLATLNFVTDGTPGRTLPEALQWFGIAIADPTTSRFAGFFLITVLGGEFGLIFGALQKERIIICP*
Ga0066674_103087241	3300005166	Soil	MTPIRRGLLAGLLAGLLLAMLNFVTDGTPGRTLPDALHWFGISITDPTTSRFAGFFLLIVLGGIAGIIFGLAQRERFI
Ga0066674_105425311	3300005166	Soil	MEERELIHIRGGLLAGLLAGLLLAMLNFVTDGTPGRTLPDALHWFGITIADPTISRFAGFFLLIVLGGIAGIIFGIVQRERMIT
Ga0066677_104850191	3300005171	Soil	MVQTIRRGVVAGLLAGLLLATLDFVTDGTPGRLLPEALHWFGITIADPTISRFAGFFLIIVL
Ga0066683_106558822	3300005172	Soil	MMNIRRGLLAGLLAGLLLAMLNFVTDGTPGRTLPDALHWFGITIANPTISRFAGFFLLIVLGGVFGLIFGAFQR
Ga0066680_104076171	3300005174	Soil	MNNIRRGLLAGLAAGLVLATLNFVTDGTPGRTLPDALRWFGITIADSTVSRFAGFFLLIILGGVFGLIFGAL
Ga0066679_104312322	3300005176	Soil	MNNFRRGLLAGLAAGLVLATLNFVTDGTPGRTLPDALRWFGITIADPIVSRFAGFFLLIVLGGVFGLIFGALQR
Ga0066690_105195341	3300005177	Soil	MVQTIRRGVVAGLLAGLLLATLDFVTDGTPGRLLPEALNWFGITIADPTISRFAG
Ga0066688_109929281	3300005178	Soil	MTPIRRGLLAGLLAGLLLAMLNFVTDGTPGRTLPDALHWFGISITDPTTSRFAGFFLLIVLGGI
Ga0066678_110000912	3300005181	Soil	LIHIRRGLLAGLLAGLLLAMLNFVTDGTPGRTLPDALHWFGITIADPTISRFAGFFLLIVLGGIAGIIFGIV
Ga0070709_112668312	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MNIRRGLLAGILAGLLLAILNFVTDGTPGRTLPDALHWFGITIADPTISRFSGFFLLIVLGGLFG
Ga0070714_1008849882	3300005435	Agricultural Soil	MNIRRGLLAGILAGLLLAILNFVTDGTPGRTLPDALHWFGITIADPTISRFSGFFLLIVLGGLFGLIFGAVQRERSITLSRALLSGL
Ga0066689_106262491	3300005447	Soil	MQTIRRGVVAGLLAGLLLAMLDFVTDGTPGRLLPEALHWFGISIADPTISR
Ga0070698_1004050353	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MQTLRGGLLAGLLAGLVLAMLNFVTDGTPGRLLPEALHWFGITIANPTISRFAGFFLLLVLGGVFGLIFGALQ
Ga0070698_1011896291	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	METLRRGLVAGLLAGLVLAMLDFVTDGTPGRLLPEALHWFGITIADPTISRFAGFFL
Ga0070697_1001656801	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	METLRRGLVAGLLAGLVLAMLDFVTDGTPGRLLPEALHWFGITIADPTISRFAGFFLLLVLGGVFGLIFGALQRERIITIRRALL
Ga0066692_108453882	3300005555	Soil	MHTLRRDLVAGLLAGLVLAMLNFVTDGTPGRLLPGVLHWFGITIADPTISRFAGFFLL
Ga0066707_108634412	3300005556	Soil	MIHIRRGLLAGLLAGLLLAMLNFVTDGTPGRTLPDALHWFGITIADPTISRFAGFFLLIVLGGIAGTIFGIVQRE
Ga0066699_107420741	3300005561	Soil	MVQTIRRGVVAGLLAGLLLATLDFVTDGTPGRLLPEALHWFGITIADPTISRFAGFFLI
Ga0066706_105988261	3300005598	Soil	MRNIRRGFLAGLLAGLLLAMLNFVTDGTPGRTLPNALHWFGITIADPTISRFAGFFLLIVLGGIAGIIFGIVQRE
Ga0066706_110825692	3300005598	Soil	MVQTIRRGVVAGLLAGLLLATLDFVTDGTPGRLLPEALNWFGITIADPTISRFAGFFL
Ga0075024_1008198691	3300006047	Watersheds	MSHIRRGLLAGLLAGLLLAMLNFITDGTPGRTLPDALHWFGITIADPTLSRFIGFFLLIVLGGIAGIIFGLVQGERVI
Ga0075029_1011580421	3300006052	Watersheds	MTSIRRGLLAGLLAGLILATLNFVTDGTPGRTLPDALHWFGIAVADPTTSRFAGFFLIIVLGGVFG
Ga0075017_1005136392	3300006059	Watersheds	MTNIRRGLLAGLSAGLLLAMLNFVTDGTPGRTLPEVLHWFGITIADPTISRFSGFFLLIVLGGISGLIFGALQREKN
Ga0075017_1012251321	3300006059	Watersheds	MTQIRRGLLAGLLAGLLLAMLNFVTDGTPGRTLPDALHWFGITITDPTISRFAGFFLLIVLGGIAGIIFGLIQGERFISIRRALLSGLV
Ga0075018_104206042	3300006172	Watersheds	MTHIRRGLLAGLLAGLLLAMLNFVTDGTPGRTLPDALHWFGITIADPTTSRFAGFFFLIVLGGIAGI
Ga0066653_100793834	3300006791	Soil	LAGLLAGLLLAMLNFVTDGTPGRTLPDALHWFGITIADPAISRFAGFFL
Ga0066665_113666651	3300006796	Soil	MMNIRRGLLAGLLAGLLLAMLNFVTDGTPGRTLPDALHWFGITIANPTISRFA
Ga0066660_105393521	3300006800	Soil	MNNIRRGLLAGLAAGLVLATLNFVTDGTPGRTLPDALRWFGITIADPTISRFAGFFLLILLGGVFGLIFGALQRERSVTSNRALLSG
Ga0075435_1020230761	3300007076	Populus Rhizosphere	MNIRRGLLAGILAGLLLAILNFVTDGTPGRTLPDALHWFGITIADPTISR
Ga0099829_103644701	3300009038	Vadose Zone Soil	MTSIRKGLLAGLLAGLVLAILNFVTDGTPGRTLPEALHWFGITIADPTTSRFAGFFLIIVLGGVFGLIFGSFQRDRI
Ga0099829_116910822	3300009038	Vadose Zone Soil	MTSMRRGLLAGLLAGLVLAMLNFVTDGTPGRTLPDALHWFGITIADPTTSRFAGFFLIIVLGGVFGLIFGSFQRDRI
Ga0099828_102542031	3300009089	Vadose Zone Soil	MTSIRKGLLAGLLAGLVLAILNFVTDGTPGRTLPEALHWFGITIADPTTSRFAGFF
Ga0099827_112909492	3300009090	Vadose Zone Soil	MQTLRRGLVAGLLAGLVLAMLNFVTDGTPGRLLPEALHWFGITIADPTISRFAGFFLFIVLGGVFGLIFGALQRERIITIRRALLWGLALGFVWWLVFSLL
Ga0066709_1040200702	3300009137	Grasslands Soil	MQTIRRGLVAGLLAGLVLATLDFVTDGTPGSALPAALHWFGITIADPTISRFAGFFLLLVLGGMFGLIFGALQRERIISISRALLSGLALGFVWWLVFS
Ga0066709_1042766062	3300009137	Grasslands Soil	MEEREMIHIRRGLLAGLLAGLLLAMLNFVTDGTPGRTLPDALHWFGITIADPTISRFAGFFLLIVLG
Ga0116218_13166052	3300009522	Peatlands Soil	MIHIRRGLLAGLLAGLLLAMLNFVTDGTPGRTLPDGLHWFGITIADPTLSRFTGFFLLIVLGG*
Ga0126373_112074931	3300010048	Tropical Forest Soil	MQTLRWGLVAGLLAGLVLATLDFVTDGTPGRLLPEALHWFGITIANPTSSRFAGFFLLIVLGGVFGLIFGALQRERMITSRQALLWGLALGF
Ga0126373_126231642	3300010048	Tropical Forest Soil	MTHIRRGLISGLLAGLLLAMLNFVTDGTPGRTLPDALHWFGITIADPTTSRFAGFFLLIVLGGI
Ga0127474_10788922	3300010108	Grasslands Soil	MQAIRWGLVAGLLAGLVLAMLNFVTDGTPGRLLPEALQWFGITIADPTISRF
Ga0134067_101532301	3300010321	Grasslands Soil	MVQTIRRGVVAGLLAGLLLAMLDFVTDGTPGRLLPEALHWFGITIADPTVSRFAGFFL
Ga0134064_104488242	3300010325	Grasslands Soil	MEEREMIHIRRGLLAGLLAGLLLAMLNFVTDGTPGRTLPDALHWFGITIADP
Ga0134063_103143051	3300010335	Grasslands Soil	MTPIRRGLLAGLLAGLLLAMLNFVTDGTPGRTLPDALHWFGISITDPTTSRFAGFFLLIVLGGIAGIIFGLAQR
Ga0134071_105583961	3300010336	Grasslands Soil	MMQTLRRGLVAGLLAGLVLATLDFVTDGTPGSALPAAVHWFGITIADPTI
Ga0126370_109306621	3300010358	Tropical Forest Soil	LAGLLAGLVLAMLDFVTDGTPGRLLPEALHWFGITIADPTSSRFAGFLLLIALGGVFGLIFGALQREGIITISR
Ga0126376_108655611	3300010359	Tropical Forest Soil	MQTLRIGLLAGLLAGLLLALLDFVTDGTPGRLLPDALHWFGLTIADPTSSR
Ga0126378_124751801	3300010361	Tropical Forest Soil	MQTLRRGLLAGLLAGLVLAMLDFVTDGTPGRLLPEASHWFGITIADPTISRFAGFFFLIMLGGAFGLVFGALQQERTITSSRALLW
Ga0126381_1006720581	3300010376	Tropical Forest Soil	MHTLRRGLLAGLLAGLVLAMLDFVTDGTPGRLLPEALHWFGITIADPTSSRFAGFFLL
Ga0136449_1044694491	3300010379	Peatlands Soil	MTHIRRGLFAGLLAGLLLAMLNFVTDGTPGRTLPDGLNWLGITVANRN
Ga0136821_13550271	3300010387	Sediment	XXXAGLLAGLVLAMLNFVTDGTPGRTLPEALHWFGITIADPTVSRFASFFLIIVLGGAFGLIFGAFQR
Ga0137393_107447043	3300011271	Vadose Zone Soil	MTSIRKGLLAGLLAGLVLAILNFVTDGTPGRTLPEALHWFGITIADPTTS
Ga0137389_111677342	3300012096	Vadose Zone Soil	MQTLRRGLLAGLLAGLVLAMLNVVTDGTPGRLLPEALHWFGITIATPTTSRFAGFFLLLVLGGVCGLIFG
Ga0137364_101689174	3300012198	Vadose Zone Soil	MMQTLRGGLVAGLLAGLVLAMLDFVTDGTPGRLLPEALHWFGITTADPTISRFAGFFLLIALGGVFGLIFGA
Ga0137364_105323882	3300012198	Vadose Zone Soil	MVQTIRRGVVAGLLAGLLLATLDFVTDGTPGRLLPEALNWFGITIADPTISRFAGFFLI
Ga0137383_104378322	3300012199	Vadose Zone Soil	MMNIRRGLLAGILAGLVLAILNFVTDGTPGRTLPDALHWFGITIADPTISRFSGFFLLIVLG
Ga0137383_108525782	3300012199	Vadose Zone Soil	MQTLRRGLLAGLLAGLVLAMLNFVTDGTPGRSLPEALHWFGITIADPTISRCAGFFLLIL
Ga0137383_109206302	3300012199	Vadose Zone Soil	MEEREMIHIRKGLLAGLLAGLLLAMLNFVTDGTPGRTLPDALHWFGITIADPTISRFAGFFLLIVLGGIAGIIFGIVQRERVIT
Ga0137382_100593821	3300012200	Vadose Zone Soil	MVQTIRRGVVAGLLAGLLLATLDFVTDGTPGRLLPEALHWFGITIADPTISRFAGFFLIIVLGGVFGLIFGALQRERII
Ga0137382_111287832	3300012200	Vadose Zone Soil	MQTIRRGLIAGLLAGLVLAMLDFVTDGTPGRLLPEALNWFGITIADPTISRFAGFFLIIVLGGVFGLIFGALQRERII
Ga0137365_103884931	3300012201	Vadose Zone Soil	MQTLRRGLLAGLLAGLTLAMLNFVTDGTPGRSLPEALHWFGITIANLTI
Ga0137380_103200244	3300012206	Vadose Zone Soil	MEEREMIHIRGGLLAGLLAGLLLAMLNFVTDGTPGRTLPDALHWFGITIADPTISRFAGFFLLIVLGGIAGTIFGIVQRERIITISR
Ga0137380_106460361	3300012206	Vadose Zone Soil	MMQTLRRGLVLAMLNFVTDGTPGRLLPEALHWFGITIADPTMSRFAGF
Ga0137381_111281111	3300012207	Vadose Zone Soil	MMQTLRRGLVLAMLNFVTDGTPGRLLPEALHWLGITIADPTISRFAGFFLLLVLGGVFGLIFGALQRERMIPISRALLWGLA
Ga0137376_110001871	3300012208	Vadose Zone Soil	MVQTIRRGVVAGLLAGLLLATLDFVTDGTPGRLLPEALHWFGITTADPTISRFAGFFLLIALGGVFGLIF
Ga0137379_104011664	3300012209	Vadose Zone Soil	MEEREMIHIRGGLLAGLLAGLLLAMLNFVTDGTPGRTLPNALHWFGITIAD
Ga0137379_111184181	3300012209	Vadose Zone Soil	MMQTIRRGLVAGLLAALVLAMLDFVTDGTPGRLLPEALHWFGITIADPTISRFAGFFLLLVLGGVFGLIFGALQRERMIPISRALLWGLALGFVWWLVFSLLLANIMSHHAP
Ga0137377_104274043	3300012211	Vadose Zone Soil	MQTIRRGLIAGLLAGLVLAMLDFVTDGTPGRLLPEALHWFGITIADPTISRFAGFFLI
Ga0137387_106938362	3300012349	Vadose Zone Soil	MNSIRRGLLAGLAAGLVLATLNFVTDGTPGRTLPDALRWFGITIADSTVSRFAGFFLLIILGGVFGLIFG
Ga0137387_111717901	3300012349	Vadose Zone Soil	MQTLRRGLVAGLLAGLVLAMLNFVTDGTPGRTLPEALHWFGITIADPTMSRFAGFFLLLVLGGVFGLIFGSLQRERIITIRRALLWGLAFGFAWWLVFSLLLANIMSH
Ga0137371_101142881	3300012356	Vadose Zone Soil	MVQTIRRGVVAGLLAGLLLATLDFVTDGTPGRLLPEALHWFGITIADPTISRFAGFFLIIVLG
Ga0137371_101970661	3300012356	Vadose Zone Soil	MTPIRRGLLAGLLAGLLLAMLNFVTDGTPGRTLPDALHWLGITITDPTTSRFAGFFLLIVLGGIA
Ga0137384_106557531	3300012357	Vadose Zone Soil	MTNIRKGLFAGLLAGLLLAMLNFVTDGTPGRILPDVLHWFGIIIADPTISRFSGFFLLIVLGGLSGLIYGTLQRQKYIT
Ga0137384_110943471	3300012357	Vadose Zone Soil	MMQTLRRGLVAGLLAGLVLAMLNFVTDGTPGRLLPEALHWFGITIADPTMSRFA
Ga0137360_107237273	3300012361	Vadose Zone Soil	MQTLRRGLLAGFLAGLVLATLDFVTDGTPGRLLPEALHWFGITIANPTISRFAGFFLLLVLGGVFGLIFG
Ga0137361_110590702	3300012362	Vadose Zone Soil	MQTLRRGLVAGLLAGLVLAMLDFVTDGTPGRLLPEALHWFGITIADPTISRFAGFFSLIALGGVFGLIFGALLWGLALGFI*
Ga0134110_104332061	3300012975	Grasslands Soil	MLNFVTDGTPGRTLPDALHWFGISITDPTTSRFAGFFLLIVLGGIAGIIFGLAQRERFISIGRALL
Ga0182041_114218092	3300016294	Soil	AFWAVLCKGAENMTSIRRGLLAGLLAGLILATLNFVTDGTPGRTLPDALHWFGIAMADPTTSRFAGFS
Ga0182035_121059381	3300016341	Soil	MTSMRRGLLAGLLAGLILAILNFVTDGTPGRTLPEALHWFGITIADPTISRFSGFFLLIALG
Ga0182040_110500201	3300016387	Soil	MTQIRRGLIAGLLAGLLLAMLNFVTDGTPGRTLPDALHWFGITIADPTVSRFA
Ga0134074_12355491	3300017657	Grasslands Soil	MTPIRRGLLAGLLAGLLLAMLNFVTDGTPGRTLPDALHWFGISITDPTTS
Ga0187807_12262712	3300017926	Freshwater Sediment	MTHIRRGLLAGLLAGFLMAMLNFVTDGTPGRTLPDALHWFGVTIADPTLSRFTGFFVLILLGGIAGIIFGLVQ
Ga0187806_10958981	3300017928	Freshwater Sediment	MTHSRRGLLAGLLAGFLMAMLNFVTDGTPGRTLPDALHWFGVTIADPTLSRFTGF
Ga0187775_101033153	3300017939	Tropical Peatland	MAHVRRGLMAGLLAGLLLAMLNFVTDNTPGHTLPDALHWFGITISDPTASRFAGFF
Ga0187778_101265711	3300017961	Tropical Peatland	MTHIRRGLWAGLLAGLLLAMLNFVTDGTPGRTLPDVLHWFGITITDPTLSRFGGFFLL
Ga0187778_102785992	3300017961	Tropical Peatland	MTHIRRGLIAGLLAGLLLAMLNFVTDSTPGRTLPDALRWFGISIADPTASRFAGFFLLIVLGGIVGIIFGFVQGERFISIGRSLL
Ga0187776_109344142	3300017966	Tropical Peatland	MAHVRRGLMAGLLAGLLLAMLNFVTDSTPGRTLPDALHWFAITIADPTASRFAGFFLLIVLGGIVGTIFGFVQGERFISIGRSLLSGLVLGLIWWLIFSLL
Ga0187788_100957453	3300018032	Tropical Peatland	MAHVRRGLMAGLLAGLLLAMLNFVTDSTPGRTLPDALHWSGISIADPTASRFAGFFLLIVLGGIVGIIFGFVQGERFISIGRSLLSGLVLGLIWWLIFSLLLTNIMNHASPLS
Ga0066655_104238112	3300018431	Grasslands Soil	MQTLRRGLVAGLLAGLVLAMLNFVTDGTPGRNLPEALHWFGITIADPTISRFAGFFLLIVLGGVFGLIFGALQRERIITIS
Ga0066667_111933731	3300018433	Grasslands Soil	MQTIRRGLVAGLLAGLVLATLDFVTDGTPGSALPGALHWFGITIADPTISRFAGFFLLLVLGGVFGLIFGALQRERMISISRALLSGLALGFVWWLVFSLLLANIMSHHSPFSLDFGR
Ga0066662_122625512	3300018468	Grasslands Soil	MTPIRRGLLAGLLAGLLLAMLNFVTDGTPGRTLPDALHWFGISITDPTTSRFAGFFLLIVLGGIAGIIFGLAQRERFISI
Ga0066662_124972021	3300018468	Grasslands Soil	MTHIRKGLLAGLLAGLLLAMLSFVTDGTPGRTLPDVLHWFGITITDPTTSRFAGFFLLIVLGGIAGIIFGLVQGERFISIGRALLS
Ga0066662_128829122	3300018468	Grasslands Soil	MNNIRRGLLAGLAAGLVLATLNFVTDGTPGRTLPDALRWFGITIADPAISRFAGFFLLILLGGMFGLIFGALQRERGVTSNRALLSGLLLGFIWWLIFSLLLTN
Ga0066662_128829142	3300018468	Grasslands Soil	MNNIRRGLLAGLAAGLVLATLNFVTDGTPGRTLPDALRWFGITIADTTISRFAGFFLLILLGGVFGLIFGALQRERGVTSNRALLSGLLLGFIWWLIFSLLLTN
Ga0066669_114360012	3300018482	Grasslands Soil	MVQTIRRGVVAGLLAGLLLATLDFVTDGTPGRLLPEALNWFGITIADPTISRLDGFFLI
Ga0126371_104762681	3300021560	Tropical Forest Soil	MTHIRRGLVAGLLAGLLLAMLNFVTDGTPGRTLPDVLHWFGITIADPTISRFAGFFLLIVLGGIAGIIFSLVQGERIIPLSRSLLSGLV
Ga0213851_12768602	3300021860	Watersheds	MAHIRRGLLAGLLAGLLLAMLNFVTDGTPGRTLPDVLHWFGIAVADPTLSRFTGFFVLIVLGGIV
Ga0207664_103569763	3300025929	Agricultural Soil	MNIRRGLLAGILAGLMLSILNFVTDGTPGRTLPDALHWFGITIADPTISRFSGFFLLIVLGGLFGLIFGAFQRERSITLSRALLSGLALGL
Ga0209153_12395802	3300026312	Soil	MNNIRRGLLAGLAAGLVLATLNFVTDGTPGRTLPDALRWFGITIADPAISRFAGFFLLILLGGMFGLIFGALQRERGVTSNRALLSGLL
Ga0209152_104702611	3300026325	Soil	MMQTIRRGVVAGLLAGLLLATLDFVTDGTPGRLLPEALHWFGITIADPTISRFAGFFLIVVLGRVFGLIFGA
Ga0209474_104184562	3300026550	Soil	MQTIRRGLVAGLLAGLVLATLDFVTDGTPGSALPAALHWFGITIADPTISRFAGFFLLLVLGGVFGLIFGALQRERMISISRALLSGLALGFVWW
Ga0209648_100226428	3300026551	Grasslands Soil	VSIRLFPFSLNYLTGALAGLLAGLVLATLNFVTDGTPGRTLPEALQWFGIAIADPTTSRFAGFFLITVLGGEFGLIFGALQKERIIICP
Ga0209648_101491101	3300026551	Grasslands Soil	MTSMRRGLLAGLLAGLVLAMLNFVTDGTPGRTLPDALHWFGITIADPTTSRFAGFFLIIVLGGVFGLI
Ga0208199_10447682	3300027497	Peatlands Soil	MIHIRRGLLAGLLAGLLLAMLNFVTDGTPGRTLPDGLHWFGITIADPTLSRFTGFFLLIVLGGIVGIIFGLVQGERFISISRALLSGLALGFAWWLVFSLLLTNIMN
Ga0208324_12163502	3300027604	Peatlands Soil	MTNIRRGLLAGLSAGLLLAMLNFVTDGTPGRTLPDALHWFGITIADPTISRFSGFFLLIVLGGLAGLIYGALQRQRYITM
Ga0209283_102433563	3300027875	Vadose Zone Soil	MQTLRRGLLAGLLAGLVLAMLNFVTDGTPGRLLPEALHWFGITIANPTISRFAGFFLLIVLGGVFGLIFGALQREKSI
Ga0209283_104441721	3300027875	Vadose Zone Soil	MTSIRKGLLAGLLAGLVLAILNFVTDGTPGRTLPEALHWFGITIADPTTSRFAGFFLIIVLGGVFGLIFG
Ga0209590_102789661	3300027882	Vadose Zone Soil	MQTLRRGLVAGLLAGLVLAMLNFVTDGTPGRLLPEALHWFGITIANPTISRFAGFFLLLVLGGVFGLIFGVLQRERMITIGRMLLWGLAL
Ga0209590_106227922	3300027882	Vadose Zone Soil	MTNIRRGLLAGLLAGLLLAMLNFVTDGTPGRTLPDALHWFGITIADPTISRFSGFFLLIVLGGI
Ga0170834_1013533181	3300031057	Forest Soil	MQTLRRGLLAGLLAGLVLAMLDFVTDGTPGRLLPEALHWFGITIANPTISKFAGFFLLLVLGGVFG
Ga0306923_120246671	3300031910	Soil	MTSIRRGLLAGLLAGLILATLNFVTDGTPGRTLPDALHWFGIAMADPTTSRFAGFS
Ga0306920_1023366771	3300032261	Soil	MTHVRRGLIAGLLAGLLLAMLNFVTDGTPGRTLPEALRWFGISIADPT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084672

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences