Metagenome / Metatranscriptome Family F084669

Basic Information
Family ID	F084669
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	43 residues
Representative Sequence	GRLNPKVTVWGKDGTPEDVVEHYVARLLKGLVNDRHIVVAD
Number of Associated Samples	101
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	4.46 %
% of genes near scaffold ends (potentially truncated)	93.75 %
% of genes from short scaffolds (< 2000 bps)	92.86 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Most Common Taxonomy
Group	Unclassified (54.464 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.179 % of family members)
Environment Ontology (ENVO)	Unclassified (22.321 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.321 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.29% β-sheet: 11.59% Coil/Unstructured: 68.12%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF06319	MmcB-like	66.96
PF01008	IF-2B	9.82
PF01370	Epimerase	7.14
PF13546	DDE_5	1.79
PF03401	TctC	0.89
PF12697	Abhydrolase_6	0.89
PF01063	Aminotran_4	0.89
PF03462	PCRF	0.89
PF02954	HTH_8	0.89
PF04828	GFA	0.89
PF07859	Abhydrolase_3	0.89
PF02092	tRNA_synt_2f	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG5321	Uncharacterized conserved protein	Function unknown [S]	66.96
COG0182	5-methylthioribose/5-deoxyribulose 1-phosphate isomerase (methionine salvage pathway), a paralog of eIF-2B alpha subunit	Amino acid transport and metabolism [E]	9.82
COG1184	Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family	Translation, ribosomal structure and biogenesis [J]	9.82
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	1.79
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	0.89
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.89
COG0751	Glycyl-tRNA synthetase, beta subunit	Translation, ribosomal structure and biogenesis [J]	0.89
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	0.89
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.89
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.89

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
All Organisms	root	All Organisms	45.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
cellular organisms	root	All Organisms → cellular organisms	45.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	41.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	40.18 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	26.79 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.46 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3.57 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.89 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	3.57 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	1.79 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.89 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.89 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	3.57 %
Lysobacter dokdonensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter dokdonensis	0.89 %
unclassified Afipia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia	0.89 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.89 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3.57 %
Afipia sp. 1NLS2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. 1NLS2	0.89 %
Rhizobium mongolense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium mongolense	0.89 %
Lysobacter dokdonensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter dokdonensis	0.89 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004153\|Ga0063455_101013750	Not Available	603	Open in IMG/M
3300004157\|Ga0062590_102826978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300004480\|Ga0062592_101303471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	686	Open in IMG/M
3300004480\|Ga0062592_102547138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	515	Open in IMG/M
3300005167\|Ga0066672_10701643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300005180\|Ga0066685_10353682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1020	Open in IMG/M
3300005332\|Ga0066388_104056763	Not Available	747	Open in IMG/M
3300005332\|Ga0066388_106881084	Not Available	572	Open in IMG/M
3300005332\|Ga0066388_108028613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp. 1NLS2	528	Open in IMG/M
3300005341\|Ga0070691_10408223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	767	Open in IMG/M
3300005437\|Ga0070710_10640351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	744	Open in IMG/M
3300005507\|Ga0074259_10064035	Not Available	518	Open in IMG/M
3300005545\|Ga0070695_100616786	Not Available	853	Open in IMG/M
3300005545\|Ga0070695_101606116	Not Available	543	Open in IMG/M
3300005548\|Ga0070665_100652215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1066	Open in IMG/M
3300005555\|Ga0066692_10274914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1066	Open in IMG/M
3300005713\|Ga0066905_101285885	Not Available	657	Open in IMG/M
3300005842\|Ga0068858_101949316	Not Available	581	Open in IMG/M
3300006172\|Ga0075018_10587183	Not Available	591	Open in IMG/M
3300006175\|Ga0070712_101553216	Not Available	579	Open in IMG/M
3300006578\|Ga0074059_12140314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	646	Open in IMG/M
3300006844\|Ga0075428_102169257	Not Available	573	Open in IMG/M
3300006914\|Ga0075436_101415995	Not Available	527	Open in IMG/M
3300007004\|Ga0079218_11936350	Not Available	669	Open in IMG/M
3300009089\|Ga0099828_10227871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1666	Open in IMG/M
3300009089\|Ga0099828_10476301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1126	Open in IMG/M
3300009156\|Ga0111538_10191068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2599	Open in IMG/M
3300009553\|Ga0105249_10014009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7088	Open in IMG/M
3300010037\|Ga0126304_10745510	Not Available	663	Open in IMG/M
3300010043\|Ga0126380_10758511	Not Available	788	Open in IMG/M
3300010045\|Ga0126311_10972151	Not Available	693	Open in IMG/M
3300010046\|Ga0126384_11218364	Not Available	695	Open in IMG/M
3300010047\|Ga0126382_11845721	Not Available	570	Open in IMG/M
3300010166\|Ga0126306_11500932	Not Available	559	Open in IMG/M
3300010358\|Ga0126370_12075133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300010359\|Ga0126376_11419684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	720	Open in IMG/M
3300010360\|Ga0126372_11387249	Not Available	735	Open in IMG/M
3300010360\|Ga0126372_12919975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	530	Open in IMG/M
3300010362\|Ga0126377_11805379	Not Available	687	Open in IMG/M
3300010366\|Ga0126379_12198833	Not Available	653	Open in IMG/M
3300010366\|Ga0126379_13762517	Not Available	508	Open in IMG/M
3300010376\|Ga0126381_100870191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1296	Open in IMG/M
3300010396\|Ga0134126_12099016	Not Available	617	Open in IMG/M
3300010398\|Ga0126383_10409257	Not Available	1395	Open in IMG/M
3300010863\|Ga0124850_1000108	All Organisms → cellular organisms → Bacteria	11637	Open in IMG/M
3300010868\|Ga0124844_1136931	Not Available	931	Open in IMG/M
3300011106\|Ga0151489_1508616	Not Available	642	Open in IMG/M
3300012205\|Ga0137362_11034238	Not Available	699	Open in IMG/M
3300012356\|Ga0137371_10017236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	5548	Open in IMG/M
3300012683\|Ga0137398_10771922	Not Available	671	Open in IMG/M
3300012917\|Ga0137395_10702901	Not Available	731	Open in IMG/M
3300012951\|Ga0164300_10874827	Not Available	565	Open in IMG/M
3300012961\|Ga0164302_10501253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	857	Open in IMG/M
3300012989\|Ga0164305_10227081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter dokdonensis	1332	Open in IMG/M
3300013306\|Ga0163162_10356090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium mongolense	1596	Open in IMG/M
3300015077\|Ga0173483_10309428	Not Available	777	Open in IMG/M
3300015374\|Ga0132255_101029503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1236	Open in IMG/M
3300015374\|Ga0132255_103976718	Not Available	627	Open in IMG/M
3300016294\|Ga0182041_10223169	Not Available	1516	Open in IMG/M
3300016294\|Ga0182041_11845507	Not Available	561	Open in IMG/M
3300018077\|Ga0184633_10331086	Not Available	772	Open in IMG/M
3300018083\|Ga0184628_10246863	Not Available	937	Open in IMG/M
3300018433\|Ga0066667_12007985	Not Available	532	Open in IMG/M
3300018465\|Ga0190269_11173562	Not Available	600	Open in IMG/M
3300018466\|Ga0190268_11880676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	544	Open in IMG/M
3300019263\|Ga0184647_1474274	Not Available	1628	Open in IMG/M
3300019867\|Ga0193704_1078608	Not Available	608	Open in IMG/M
3300020581\|Ga0210399_10917356	Not Available	710	Open in IMG/M
3300021372\|Ga0213877_10254074	Not Available	585	Open in IMG/M
3300021384\|Ga0213876_10239902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	964	Open in IMG/M
3300021560\|Ga0126371_13859515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	505	Open in IMG/M
3300025898\|Ga0207692_10494832	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300025920\|Ga0207649_11120200	Not Available	621	Open in IMG/M
3300025929\|Ga0207664_11187150	Not Available	681	Open in IMG/M
3300025935\|Ga0207709_11855884	Not Available	502	Open in IMG/M
3300025938\|Ga0207704_10318344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1199	Open in IMG/M
3300026078\|Ga0207702_11861485	Not Available	593	Open in IMG/M
3300026326\|Ga0209801_1243938	Not Available	688	Open in IMG/M
3300026328\|Ga0209802_1241636	Not Available	631	Open in IMG/M
3300026557\|Ga0179587_10687906	Not Available	674	Open in IMG/M
3300027181\|Ga0208997_1027724	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300027388\|Ga0208995_1061362	Not Available	660	Open in IMG/M
3300027565\|Ga0209219_1177518	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300027633\|Ga0208988_1125584	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300027703\|Ga0207862_1172417	Not Available	645	Open in IMG/M
3300027903\|Ga0209488_10491419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	901	Open in IMG/M
3300028380\|Ga0268265_10026480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4127	Open in IMG/M
3300028716\|Ga0307311_10137886	Not Available	698	Open in IMG/M
3300028880\|Ga0307300_10247640	Not Available	590	Open in IMG/M
3300028906\|Ga0308309_10171255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1765	Open in IMG/M
3300031170\|Ga0307498_10032772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1293	Open in IMG/M
3300031226\|Ga0307497_10010254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2641	Open in IMG/M
3300031226\|Ga0307497_10219374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	834	Open in IMG/M
3300031543\|Ga0318516_10369281	Not Available	827	Open in IMG/M
3300031545\|Ga0318541_10208370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1082	Open in IMG/M
3300031546\|Ga0318538_10060409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1879	Open in IMG/M
3300031561\|Ga0318528_10261570	Not Available	928	Open in IMG/M
3300031572\|Ga0318515_10144591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1265	Open in IMG/M
3300031640\|Ga0318555_10025484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2831	Open in IMG/M
3300031680\|Ga0318574_10187597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1185	Open in IMG/M
3300031680\|Ga0318574_10208554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1123	Open in IMG/M
3300031723\|Ga0318493_10747856	Not Available	549	Open in IMG/M
3300031736\|Ga0318501_10715161	Not Available	553	Open in IMG/M
3300031805\|Ga0318497_10123267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1404	Open in IMG/M
3300031858\|Ga0310892_10410667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	884	Open in IMG/M
3300031880\|Ga0318544_10030577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1868	Open in IMG/M
3300031893\|Ga0318536_10243347	Not Available	914	Open in IMG/M
3300031897\|Ga0318520_10792314	Not Available	594	Open in IMG/M
3300031912\|Ga0306921_10614928	Not Available	1255	Open in IMG/M
3300031946\|Ga0310910_10595180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	877	Open in IMG/M
3300031954\|Ga0306926_10243068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2232	Open in IMG/M
3300032090\|Ga0318518_10065706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1757	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.71%
Host-Associated	Host-Associated	14.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.14%
Plants	Host-Associated → Plants	14.29%
Aquatic	Environmental → Aquatic	3.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.25%
Sediment	Environmental → Aquatic → Sediment	2.68%
Freshwater	Environmental → Aquatic → Freshwater	0.89%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.29%
Loam	Environmental → Terrestrial → Soil → Loam	17.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.79%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.18%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.57%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.68%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.79%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005507	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019263	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027181	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063455_1010137501	3300004153	Soil	LSAKVTVWGRDGTPEDVVQHYIGQLLKGLVTDRQIIVAN*
Ga0062590_1028269781	3300004157	Soil	LVSWVGRAGRLNPKVTVWGRDGTPEDVVEHYVARLLKGLVNDRHIVVAD*
Ga0062592_1013034711	3300004480	Soil	LVSWVGRAGRLNPKVTVWGRDGTPEDVVEHYVARLLKGLVNDRHIIVAD*
Ga0062592_1025471381	3300004480	Soil	WTGRSGRLDPKVTVWGKDGTPEDVVQNYIAQLLKGLVPDRKISVAD*
Ga0066672_107016431	3300005167	Soil	VSWSGRSGRLSPKVTVWGRDGTPEDVVGHYVAQLLKGLVNEGRIFVAAD*
Ga0066685_103536823	3300005180	Soil	YLVSWSGRSGRLSPKVTVWGRDGAPEDVVGHYVAQLLKGLVNERRIFVAAD*
Ga0066388_1040567632	3300005332	Tropical Forest Soil	RLSAKVTVWGKDGTPEDIVQTYIAQLLKGLVPGGKIIVAAD*
Ga0066388_1068810842	3300005332	Tropical Forest Soil	RLRAKVIVWGKDGTPADVVQNYTTQLLKGLVPDRRISVAAE*
Ga0066388_1080286131	3300005332	Tropical Forest Soil	LSPKVTVWGRDGTPAHVIRLYIARLLKGLVPARQISIADDTQRT*
Ga0070691_104082232	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VSWVGRAGRLNPKVTVWGRDGTPEDVVEHYVARLLKGLVNDRHIVVAD*
Ga0070710_106403512	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	DYLVSWTGRPGRLSAKVTVWGKDGTPTHVVQGYIARLLKGLVSARQIVIAAD*
Ga0074259_100640351	3300005507	Arabidopsis Rhizosphere	WSGRSGRLRPKVTVWGNNGTPEDVVEHYVAQLLKGLVSNQHISVAAD*
Ga0070695_1006167862	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	FVSFKNRAGRNSAKVTVWGREDTPHEVVQHYIAQLLHGLVPDRQIIVAD*
Ga0070695_1016061161	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	GRLNPKVTVWGRDGTPEDVVEHYVARLLKGLVNDRHIVVAD*
Ga0070665_1006522151	3300005548	Switchgrass Rhizosphere	VGRAGRLNPKVTVWGRDGTPEDVVEHYVARLLKGLVNDRHIVVAD*
Ga0066692_102749143	3300005555	Soil	VTVWGKDGTPQDVVQRYVSGLLSGLVSDGQIVVAVE*
Ga0066905_1012858852	3300005713	Tropical Forest Soil	KVTVWGNNGTPEDVVEHYVAQLLKGLVSNQHISVAAD*
Ga0068858_1019493161	3300005842	Switchgrass Rhizosphere	GRLNPKVTVWGKDGTPEDVVEHYVARLLKGLVSDRHIIVAD*
Ga0075018_105871831	3300006172	Watersheds	LSAKVTVWGKDGTPEDIVQTYIVQLLKGLVPGGKITVAAD*
Ga0070712_1015532161	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	WVGRAGRLNPKVTVWGRDGTPEDVVEHYVARLLKGLVNDRHIVVAE*
Ga0074059_121403141	3300006578	Soil	VSWSGRSGRLSPRVTVWGRDGTPEDVVGHYVAQLLKGLVNEGRIFVAAD*
Ga0075428_1021692571	3300006844	Populus Rhizosphere	KVTVWGKDGTPEDVVQHYIARLLKGLVPDRRIIVAD*
Ga0075436_1014159951	3300006914	Populus Rhizosphere	VSWSGRSGKLKAKVTVWGKDGTPQDIVQHYISRLLRGLVTDGQIYVAAD*
Ga0079218_119363502	3300007004	Agricultural Soil	AGRYSAKVTVWGKSDTPADIVRHYIARLLKGLVPDQQINVAAD*
Ga0099828_102278713	3300009089	Vadose Zone Soil	RLSAKVTVWGNDGTPEDVVQNYITQLLKGLVSDGKITVAAD*
Ga0099828_104763011	3300009089	Vadose Zone Soil	LSDYLLSWSGRAGRLRAKVTVWGKDGTPEDVVEHYISRLLKGLVNDGQIVVAD*
Ga0111538_101910684	3300009156	Populus Rhizosphere	GRLNPKVTVWGRDGTPEDVVEHYVARLLKGLVNDRHIVVAE*
Ga0105249_100140099	3300009553	Switchgrass Rhizosphere	WVGRAGRLNPKVTVWGRDGTPEDVVEHYVARLLKGLVNDRHIVVAD*
Ga0126304_107455101	3300010037	Serpentine Soil	SDYLVSWTGRRGLLSAKVTVWGRDGTPEDVVQHYIGQLLKGLVTDRQIIVAN*
Ga0126380_107585112	3300010043	Tropical Forest Soil	PKVTVWGNNGTPEDVVEHYVARLLKGLVSNQHISVAAD*
Ga0126311_109721512	3300010045	Serpentine Soil	YLVSWTGRRGLLSAKVTVWGRDGTPEDVVQHYIGQLLKGLVTDRQIIVAN*
Ga0126384_112183641	3300010046	Tropical Forest Soil	RSGRLSPKVTVWGKDGTPEDVVGHYVAQLLKGLVNEGRIFVAAD*
Ga0126382_118457212	3300010047	Tropical Forest Soil	TVWGKDGTPEDVVGHYVAQLLRGLVSERRIFVAAD*
Ga0126306_115009321	3300010166	Serpentine Soil	GRRGLLSAKVTVWGRDGTPEDVVQHYIRQLLKGLVTDRQIIVAN*
Ga0126370_120751331	3300010358	Tropical Forest Soil	LVSWSGRSGRLSPKVTVWGKNGTPADVVGHYVAQLLKGLVNERRIFVAAD*
Ga0126376_114196841	3300010359	Tropical Forest Soil	TVWGKDGAPADVVGHYVAQLLKGLVNERRIFVAAD*
Ga0126372_113872492	3300010360	Tropical Forest Soil	VWGRDGTPEDVVGHYVAQLLKGLVNERRIFVAAD*
Ga0126372_129199751	3300010360	Tropical Forest Soil	KVTVWGKDGTPDDVVQSYVTRLLRGLVGDGQIFVAAE*
Ga0126377_118053791	3300010362	Tropical Forest Soil	TVWGKDGTPDDVVQSYVTRLLRGLVGDGQIFVAAE*
Ga0126379_121988332	3300010366	Tropical Forest Soil	MTVWGRDGTPEDVVGHYVAQLLKGLVNERQIFVAAD*
Ga0126379_137625171	3300010366	Tropical Forest Soil	GRLSPKVTVWGKDGAPADVVGHYVAQLLKGLVNERRIFVAAD*
Ga0126381_1008701911	3300010376	Tropical Forest Soil	RFGLLSDYLVSWSGRAGRLRAKVTVWGKDGTPEDVVQGYVSHLLKGLVSDGQFFVAAE*
Ga0134126_120990161	3300010396	Terrestrial Soil	PKVTVWGRDGTPEDVVEHYVARLLKGLVSDRHIIVAD*
Ga0126383_104092573	3300010398	Tropical Forest Soil	DYLVSWSGRSGRLSPKVTVWGKNGTPADVVGHYVAQLLKGLVNERRIFVAAD*
Ga0124850_100010813	3300010863	Tropical Forest Soil	LSHDLVSWSGRSGRLSPKVTVLGRDGTPEDVVGHYVAQLLKGLVNEGRIFVAAD*
Ga0124844_11369313	3300010868	Tropical Forest Soil	DYLVSWSGRSGRLRPKVTVWGNNGTPEDVVEHYVAQLLKGLVSNQHISVAAD*
Ga0151489_15086161	3300011106	Soil	WSGRSGRLSPKVTVWGRGGTPEDVVGHYVAQLLKGLVSEGRIFVAAD*
Ga0137362_110342382	3300012205	Vadose Zone Soil	AGRLSAKVTVWAKDGTPEDVAQHYVARLLKGLVKGRQIFVAAD*
Ga0137371_100172366	3300012356	Vadose Zone Soil	GRSGRLSPKVTVWGRDGAPEDVVGHYVAQLLKGLVNERRIFVAAD*
Ga0137398_107719221	3300012683	Vadose Zone Soil	KVTVWGKDGTPEHVVQSYIARLLKGLVNDRQIFVAAD*
Ga0137395_107029012	3300012917	Vadose Zone Soil	MGRAGRLSAKVTVWAKDGTPEDVAQHYVARLLKGLVKGRQIFVAED*
Ga0164300_108748272	3300012951	Soil	AGRFNPKVTVWGKDGTPEDVVEHYVTRLLKGLVSDRHIIVAD*
Ga0164302_105012532	3300012961	Soil	VTVWGKDGTPEDVVGHYVAQLLKGLVSEGRIFVAAD*
Ga0164305_102270811	3300012989	Soil	RLSAKVTVWGKDGTPTHVVQGYIARLLKGLVSARQIVIAAD*
Ga0163162_103560901	3300013306	Switchgrass Rhizosphere	GLLSAKVTVWGRDGTPEDVVQHYIGQLLKGLVTDRQIIVAN*
Ga0173483_103094281	3300015077	Soil	WVGRAGRLNPKVTVWGRDGTPEDVVEHYVARLLKGLVSDRHIIVAD*
Ga0132255_1010295033	3300015374	Arabidopsis Rhizosphere	TVWGRDGTPEDVVEHYVARLLKGLVNDRHIVVAE*
Ga0132255_1039767181	3300015374	Arabidopsis Rhizosphere	RAGRLNPKVTVWGKDGTPEDVVEHYVARLLKGLVNDRHIVVAD*
Ga0182041_102231693	3300016294	Soil	RSGRLSPKVTVWGKNGTPADVVGHYVAQLLKGLVNERRIFVAAD
Ga0182041_118455072	3300016294	Soil	DYLVSWSGRSGRLSPKVTVWGKDGAPADVVGHYVAQLLKGLVNERRIFVAAD
Ga0184633_103310861	3300018077	Groundwater Sediment	GRLNPKVTVWGRDGTPEDVVEHYVARLLKGLVNDRHIVVAD
Ga0184628_102468631	3300018083	Groundwater Sediment	VSWVGRAGRLNPKVTVWGRDGTPEDVVEHYVARLLKGLVNDRHIVVAD
Ga0066667_120079852	3300018433	Grasslands Soil	VWGRDGTPAHVIRRYIARLLKGLVSARQISIAADDIQRA
Ga0190269_111735621	3300018465	Soil	GRAGRLNPKVTVWGKDGTPEDVVEHYVARLLKGLVNDRHIVVAD
Ga0190268_118806761	3300018466	Soil	KYGLVTDYFVSWSGRAGRLRAKVTVWPKDGTSDDVAQHYIARLLKGLVPGGQISVAN
Ga0184647_14742741	3300019263	Groundwater Sediment	PKVTVWGRDGTPEDVVEHYVARLLKGLVNDRHIVVAD
Ga0193704_10786081	3300019867	Soil	RAGRLNPKVTVWGKDGTPEDVVEHYVARLLKGLVNDRHIVVAD
Ga0210399_109173562	3300020581	Soil	YLVSWSGRSGRLSPKVTVWGRDGTPEDVVGHYVAQLLKGLVNERRIFVAAD
Ga0213877_102540742	3300021372	Bulk Soil	VTVWGRDGTPEDVVGHYVAQLLKGLVNERRIFVAAD
Ga0213876_102399023	3300021384	Plant Roots	RLRPKVTVWGNNRTPERVVEDYVARLLKGLVSDRHISVAE
Ga0126371_138595152	3300021560	Tropical Forest Soil	GRLRAKVTVWGNDGTPADVVQNYIARLLKGLVSDRQIVVAD
Ga0207692_104948322	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LVSWTGRPGRLSAKVTVWGKDGTPTHVVQGYIARLLKGLVSARQIVIAAD
Ga0207649_111202001	3300025920	Corn Rhizosphere	KVTVWGRDGTPEDVVEHYVARLLKGLVNDRHIVVAE
Ga0207664_111871502	3300025929	Agricultural Soil	VTVWGKDGTPEDVVEDYVARLLRGLVSDRRISVAAD
Ga0207709_118558842	3300025935	Miscanthus Rhizosphere	RLNPKVTVWGRDGTPEDVVEHYVARLLKGLVNDRHIVVAD
Ga0207704_103183441	3300025938	Miscanthus Rhizosphere	GRLNPKVTVWGKDGTPEDVVEHYVARLLKGLVNDRHIVVAD
Ga0207702_118614852	3300026078	Corn Rhizosphere	VTVWGRDGTPEDVVEHYVARLLKGLVNDRHIVVAE
Ga0209801_12439381	3300026326	Soil	RSGRLSLKVTVWGRDGAPEDVVGHYVAQLLKGLVNERRIFVAAD
Ga0209802_12416362	3300026328	Soil	TVWGRDGTPEDVVGHYVAQLLKGLVNEGRIFVAAD
Ga0179587_106879061	3300026557	Vadose Zone Soil	RLSPKVTVWGKDGTPEDVVESYITRLLKGLVNGGQIFVEAE
Ga0208997_10277241	3300027181	Forest Soil	PGRLSAKVTVWGKDGTPTHVVQGYIARLLKGLVSARQIIIAAD
Ga0208995_10613621	3300027388	Forest Soil	WSGRAGRLSAKVTVWGKDGTPEDVVQSYIARLLKGLVNDRQIFVAAD
Ga0209219_11775182	3300027565	Forest Soil	TVWGKDGTPTHVVQGYIARLLKGLVSARQIIIAAD
Ga0208988_11255841	3300027633	Forest Soil	RPGRLSAKVTVWGKDGTPTHVVQGYIARLLKGLVSARQIIIAAD
Ga0207862_11724172	3300027703	Tropical Forest Soil	WTGRAGRLSAKVTVWGNNGTPEEVVQHYVARLLRGLVKGRHIFVAAD
Ga0209488_104914193	3300027903	Vadose Zone Soil	SAKVTVWGKDGTPEDVVQSYIARLLKGLVNDRQIFVAAD
Ga0268265_100264806	3300028380	Switchgrass Rhizosphere	LNPKVTVWGRDGTPEDVVEHYVARLLKGLVNDRHIVVAD
Ga0307311_101378861	3300028716	Soil	PKVTVWGKDGTPEDVVEHYVARLLKGLVNDRHIVVAN
Ga0307300_102476402	3300028880	Soil	SWVGRAGRLNPKVTVWGKDGTPEDVVEHYVARLLKGLVSDRHIVVAD
Ga0308309_101712553	3300028906	Soil	AKVTVWGKDGTPTHVVQGYIARLLKGLVSARQIVIAAD
Ga0307498_100327723	3300031170	Soil	VSWVGRAGRLNPKVTVWGKDGTPEDVVEHYVARLLKGLVNDRHIVVAD
Ga0307497_100102544	3300031226	Soil	SGRSGRLSPKVTVWGKDGTPGDVVESYISRLLRGLVKDHQISVAAE
Ga0307497_102193741	3300031226	Soil	GLLSDYLVSWSGRAGRLSAKVTVWGKDGTPEAVVQSYIARLLKGLVNDRQIFVAAD
Ga0318516_103692812	3300031543	Soil	LVRLSPKVTVWGKDGTPEDVVGHYVAQLLRGLVNERRIFVAAD
Ga0318541_102083701	3300031545	Soil	GLFGQLVRLSPKVTVWGKDGTPEDVVGHYVAQLLRGLVNERRIFVAAD
Ga0318538_100604093	3300031546	Soil	VSWSGRSGRLSPKVTVWGKDGTPEDVVGHYVAQLLRGLVNERRIFVAAD
Ga0318528_102615701	3300031561	Soil	SPKVTVWGRDGTPEDVVGHYVAQLLKGLVNERRIFVAAD
Ga0318515_101445911	3300031572	Soil	VIVWGKDGTPEDVVGHYVAQLLRGLVNERRIFVAAD
Ga0318555_100254844	3300031640	Soil	VTVWGKDGTPEDVVGHYVAQLLRGLVNERRIFVAAD
Ga0318574_101875971	3300031680	Soil	TVWGKDGTPEDVVGHYVAQLLRGLVNERRIFVAAD
Ga0318574_102085541	3300031680	Soil	SSKVTVWGKNGTPADVVGHYVAQLLKGLVNERRIFVAAD
Ga0318493_107478561	3300031723	Soil	LVSWSGRSGRLSPKVTVWGRDGTPEDVVGHYVAQLLKGLVNERRIFVAAD
Ga0318501_107151612	3300031736	Soil	SWSGRSGRLSPKVTVWGKDGAPADVVGHYVAQLLKGLVNERRIFVAAD
Ga0318497_101232673	3300031805	Soil	SGRLSPKVTVWGKNGTPADVVGHYVAQLLKGLVNERRIFVAAD
Ga0310892_104106671	3300031858	Soil	RLNPKVTVWGKDGTPEDVVEHYVARLLKGLVNDRHIVVAD
Ga0318544_100305773	3300031880	Soil	KVTVWGKDGTPEDVVGHYVAQLLRGLVNERRIFVAAD
Ga0318536_102433471	3300031893	Soil	SGRSGRLSPKVTVWGRDGTPEDVVGHYVAQLLKGLVNERRIFVAAD
Ga0318520_107923142	3300031897	Soil	SWSGRSGRLSPKVTVWGRDGTPEDVVGHYVAQLLKGLVNERRIFVAAD
Ga0306921_106149282	3300031912	Soil	LLSDYLVSWTGRSGRLRAKVTVWGKDGTPGHVVERYIAQLLKGLVPPRRISIVTDDIRRA
Ga0310910_105951801	3300031946	Soil	RAGRLRANVTVWGRDGTPEEVVRHYIARLLKGLVPDRQISVAID
Ga0306926_102430683	3300031954	Soil	SDYLVSWTGRAGRLSAKVTVWGNNGTPREVVQHYVARLLRGLVKGRRIFVAAD
Ga0318518_100657063	3300032090	Soil	SGRLSPKVTVWGKGGTPADVVGHYVAQLLKGLVNERRIFVAAD

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084669

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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