Metagenome / Metatranscriptome Family F084663

Overview

Basic Information

• Family ID: F084663
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 112
• Average Sequence Length: 66 residues
• Representative Sequence: MPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDEPPLDEEYADHEPLTGEELAEI
• Number of Associated Samples: 101
• Number of Associated Scaffolds: 112

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 61.36 %
• % of genes near scaffold ends (potentially truncated): 38.39 %
• % of genes from short scaffolds (< 2000 bps): 39.29 %
• Associated GOLD sequencing projects: 98
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (73.214 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (14.286 % of family members)
• Environment Ontology (ENVO): Unclassified (44.643 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (51.786 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 32.56%
  β-sheet: 0.00%
  Coil/Unstructured: 67.44%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01370	Epimerase	12.50
PF14246	TetR_C_7	9.82
PF13302	Acetyltransf_3	9.82
PF13738	Pyr_redox_3	4.46
PF13377	Peripla_BP_3	3.57
PF13450	NAD_binding_8	3.57
PF13460	NAD_binding_10	1.79
PF12697	Abhydrolase_6	1.79
PF12705	PDDEXK_1	0.89
PF11774	Lsr2	0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0249	DNA mismatch repair ATPase MutS	Replication, recombination and repair [L]	0.89
COG0289	4-hydroxy-tetrahydrodipicolinate reductase	Amino acid transport and metabolism [E]	0.89
COG1193	dsDNA-specific endonuclease/ATPase MutS2	Replication, recombination and repair [L]	0.89

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	26.79 %
Unclassified	root	N/A	73.21 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	26.79 %
Unclassified	root	N/A	73.21 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.79 %
Unclassified	root	N/A	73.21 %

Level 4

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	22.32 %
Unclassified	root	N/A	73.21 %

Level 5

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	21.43 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %
Unclassified	root	N/A	73.21 %

Level 6

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	21.43 %
Unclassified	root	N/A	73.21 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.89 %

Level 7

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.89 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	2.68 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	6.25 %
Unclassified	root	N/A	73.21 %

Level 8

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.89 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2.68 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	4.46 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.79 %
Unclassified	root	N/A	73.21 %

Level 9

Name	Rank	Taxonomy	Distribution
Actinophytocola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola	2.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
Oryzihumus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Oryzihumus	0.89 %
Streptosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium	4.46 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.79 %
Unclassified	root	N/A	73.21 %

Level 10

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
Oryzihumus leptocrescens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Oryzihumus → Oryzihumus leptocrescens	0.89 %
Streptosporangium amethystogenes	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium amethystogenes	1.79 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.79 %
Unclassified	root	N/A	73.21 %
unclassified Actinophytocola	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola → unclassified Actinophytocola	2.68 %
unclassified Streptosporangium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → unclassified Streptosporangium	2.68 %

Level 11

Name	Rank	Taxonomy	Distribution
Actinophytocola sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola → unclassified Actinophytocola → Actinophytocola sp.	2.68 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
Oryzihumus leptocrescens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Oryzihumus → Oryzihumus leptocrescens	0.89 %
Streptosporangium amethystogenes	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium amethystogenes	1.79 %
Streptosporangium sp. 'caverna'	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → unclassified Streptosporangium → Streptosporangium sp. 'caverna'	2.68 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.79 %
Unclassified	root	N/A	73.21 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300003659|JGI25404J52841_10019447	All Organisms → cellular organisms → Bacteria	1471
3300005354|Ga0070675_101060845	Not Available	745
3300005366|Ga0070659_100440839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1103
3300005436|Ga0070713_101017643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	799
3300005437|Ga0070710_10350233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinophytocola → unclassified Actinophytocola → Actinophytocola sp.	977
3300005842|Ga0068858_100895642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → unclassified Streptosporangium → Streptosporangium sp. 'caverna'	867
3300006175|Ga0070712_101094545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	691
3300006175|Ga0070712_101309223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	631
3300006804|Ga0079221_10326835	All Organisms → cellular organisms → Bacteria	913
3300006871|Ga0075434_100601787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1118

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Engineered	Engineered	0.89%
Environmental	Environmental	74.11%
Host-Associated	Host-Associated	25.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	0.89%
Modeled	Engineered → Modeled	0.89%
Plants	Host-Associated → Plants	25.00%
Terrestrial	Environmental → Terrestrial	73.21%

Category

Habitat	Taxonomy	Distribution
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.29%
Sediment	Environmental → Aquatic → Sediment	0.89%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.89%
Soil	Environmental → Terrestrial → Soil	73.21%

Type

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.93%
Loam	Environmental → Terrestrial → Soil → Loam	15.18%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.36%

Subtype

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.89%

Habitat

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.46%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.79%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.46%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.29%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2166559005	Simulated microbial communities from Lyon, France	Engineered
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0393.00001270	2166559005	Simulated	MPNGWWYMPPEPVPADPGWDEDLAWLDRDPERDCWLDRAREHDEPPPEEYEDYAPLTEQAGEIGEAAAR
JGI25404J52841_100194473	3300003659	Tabebuia Heterophylla Rhizosphere	MSPEPVPADPGWDEDLTWLDRDPERETWLGRAREHDEPPLEEEYEDAGPFTAEELAEIEAAAADELLGVEAATTGRRG
JGI25404J52841_100616251	3300003659	Tabebuia Heterophylla Rhizosphere	MPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDQAPGLDANEDGEDFTPLTAEELAEAR
Ga0066683_105639561	3300005172	Soil	VPPEPVPADPGWDEDLAWLDRDPEREVWLDRAREHDDPRLEEEYADDTPLTEEELAGIREAAADEMLA
Ga0070691_100583751	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDEPPLDEEYADHEPLT
Ga0070675_1010608452	3300005354	Miscanthus Rhizosphere	MPPEPVPADPGWDEDLTWLDRDPERETWLDRAGEHDDPPLDEEYADHEPLTGEELAEIREAAADELLAVGAATTGRRGPGQPGSARVFPGES
Ga0070671_1008945872	3300005355	Switchgrass Rhizosphere	MPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDDPPLDEPEEYEDYGSLT
Ga0070659_1004408391	3300005366	Corn Rhizosphere	MPPEPVPADPGWDEDLTWLDRDPERETWLDRAGEHDEPPLDEEYADHEPLTGEELAEIREAAADELLAVGAATT
Ga0070714_1015905231	3300005435	Agricultural Soil	MLPSPVPADPGWDEDLAWLDRDPEREVWLARAREHDEPPGEEEEFADFASLTAEEL
Ga0070713_1010176431	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPPEPVPADPGWDEDLAWLDRDPERKTWLDRALEHDDPPEPEEFGGFPELTPDELAEIEDAAADELLAIEAATTGRRGPGQPGS
Ga0070713_1017762511	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPNGWCSMPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDDPPLDEEYADHEP
Ga0070710_103502332	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MPPEPVPADPGWDEDLAWLDRDPEREVWLDRAREHDDPPLEEEYADYAPLTEEELAGIREAAADELLAIEAATAGRRGPGQPGSARVF
Ga0070694_1015324382	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSLPPVPADPGWDEDLAWLDRDPEREVWLARAREHDEPPGDDEDYGNFEPFSPEELAEIEEAAADELLAVTA
Ga0068855_1024363262	3300005563	Corn Rhizosphere	MPPEPVPADPGWDEDLAWLDRDPERDCWLDRAREHDEPPEPKQYEDYAPLTEEELAEIGE
Ga0066708_106560831	3300005576	Soil	MPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDEPPDLDANEDWEDFTPLTAEELAE
Ga0066706_106564591	3300005598	Soil	MPPSPVPADPGWDEDLAWLDRDPEREVWLARAREHDEPPGEEEDYGYLEPFTPEELAEIDEAAADELLA
Ga0068856_1026836692	3300005614	Corn Rhizosphere	MPSEPVPADPGWDGDLAWLDRDPERETWLDRAREHDDPPLDEPEEYEDYGSLT
Ga0068858_1008956421	3300005842	Switchgrass Rhizosphere	MPPEPVPADPGWDDDLAWLDRDPERETWLDRDREHDDPPLEGEYADDTPLTEEELAEIREAAADELLAVEAATTGRRGPDQPGSA
Ga0070717_114269072	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDEPPDLDANEDWEDFAPLTAGELAEAREGA
Ga0075018_108004051	3300006172	Watersheds	MPPSPVPADPGWDEDLTWLDRDPEREHWLARAREHDEPPGEDEGYGDFEPFTAEELAEIQ
Ga0070712_1002471691	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDDPPLDEPEEYEDYGSLTGEE
Ga0070712_1010945451	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDDSPLDVEYADYTPLTEEELAEIREAAADELLAVEAATTGRRGPGQPGSAR
Ga0070712_1013092232	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPNGWWYMPPEPVPADPGWDEDLAWLERDPERETWLDRAREHDDPPEPEEFGGFPELTPDELAEIEDAAADELLAIEAA
Ga0074056_116074993	3300006574	Soil	MLLSPVPADPGPGDLAWLDRDPERECWLDRAREHDEPPEPEEFKDYAPLTPDELAEIEDAAADDL
Ga0074050_118620011	3300006577	Soil	MPNGWWYMPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDEPPLGEEYEDVGPFTAEELRIGFDVEA
Ga0079222_113957071	3300006755	Agricultural Soil	MPPSPVPADPGWDEDLAWLDRDPEREVWLARAREHDEPPGDDEDYGYFEPFTPEELAEIEEAAADEL
Ga0079221_103268351	3300006804	Agricultural Soil	MLPSPVPADPGRDEDLTWLDRDPERETWLDRAREHDEPPGEDEEYDEYASFTA
Ga0075434_1006017871	3300006871	Populus Rhizosphere	MPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDEPPLDEEYADHEPLTGEELAEVRDAAADELLAVGAATT
Ga0075436_1011361142	3300006914	Populus Rhizosphere	MPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDDPPLDEEYADHEPLTGQELAEIRDAAADELLAVGAATSGRRGPGQPGSARVFP
Ga0074063_140887772	3300006953	Soil	MPASPAPADPGWDEDLAWLDRDPERECWLDRAREHDEPPEPEEYEDYAPLT
Ga0074063_142271922	3300006953	Soil	MPPEPVPADPGRDEDLAWLDRDPERDCWLDRAREHDEPPEPEEYEDYAPLT
Ga0079219_107739461	3300006954	Agricultural Soil	MPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDDPPLDEEYADHEPLTAEEL
Ga0066710_1030972331	3300009012	Grasslands Soil	MPDGWWYMPPEPVSADPGWDEDLTWLDRDPERQTWLDRAREHDDPPEPEEDEDYAPLTPGELAEIQDAAADELLAVQAAATGR
Ga0066710_1033836272	3300009012	Grasslands Soil	MPNGWWYMPPEPVPADPEWDEDLAWLDRDPEREVWLARAREHDEPPGEDEDYENFEPFTAEELA
Ga0099792_106371241	3300009143	Vadose Zone Soil	MPNGWWYMPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDDSPLEVEYADYTPLT
Ga0105243_102496744	3300009148	Miscanthus Rhizosphere	MPPEPVPADPGWDDDLAWLDRDPERETWLDRDREHDDPPLEGEYADDTPLT
Ga0105243_102509911	3300009148	Miscanthus Rhizosphere	MPPEPVPADPGWDGDLAWLDRDPERETWLDRAREHDEPPGPEEYEDYAPLTEQELAEIRDAAA
Ga0105238_105999581	3300009551	Corn Rhizosphere	MSLPPVPADPGWDEDLAWLDRDPERESWLERAREHEEPPGPEAYEDHAPLTPGELAGIEDAAADV
Ga0105249_104909633	3300009553	Switchgrass Rhizosphere	MPPEPVPADPGWDEDLAWLDRDPERDCWLDRAREHDEPPEPKQYEDYAPLTEEELA
Ga0126374_100596361	3300009792	Tropical Forest Soil	MPPEPVPADPGWDDDLAWLDRDPERESWLDRAREHDEPSEPEEYEYHAPLTAEEL
Ga0134082_102225762	3300010303	Grasslands Soil	MPPESVSADPGWDEDLAWLDRDPERETWLDRAREYDEPPGPEEEYGDHEPL
Ga0134125_109392931	3300010371	Terrestrial Soil	MPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDEPPLDEEYADYEPLTEEE
Ga0134125_109480642	3300010371	Terrestrial Soil	MFEEQSFFRTGWWSMPASPVPADPGWDEDLAWLDRDPERETWLDRAREHDEPPEPEQY
Ga0105239_111887372	3300010375	Corn Rhizosphere	MPPEPVRADPGWDEDLAWLDRDPERETWLDRAREHDDPPLDVEYADYPPLT
Ga0134127_123294112	3300010399	Terrestrial Soil	MPPEPVPADPGWDEDLAWLDRDPERETWLDRDREHDDPPLEGEYADDTPLTEEELAEIREAAADELLAVEAA
Ga0134121_132614921	3300010401	Terrestrial Soil	MPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDDPPLDVDYADYPPLTEEELAEIREAAADELLAVEAATTGRRGPGQFGS
Ga0151490_18137361	3300011107	Soil	MNDIRYHVRRTIILPNGWWFMPASPAPADPGWDEDLAWLDCDPERDCWLDRAREHDEPPEPEEYEDYAPLTGEELAEIREAAAD
Ga0137383_106303592	3300012199	Vadose Zone Soil	MSLPPVPADPGRDEDLAWLDRDPEREVWLARAREHDEPPGEEEEFADFASLTAEELAEI
Ga0137383_112436211	3300012199	Vadose Zone Soil	MPPEPVPADPGWDDDLAWLDRDPERETWLDRALEHDDPPKPEEFGGFPELTPDELAAIEDAAADELLAVEAATTGRRGPA
Ga0137362_106624392	3300012205	Vadose Zone Soil	MPPEPVPADPGWDEDLTWLDRDPERQTWLDRAREHDDPAEPEEFEGFPGLTPDELADIEDAAADELLAVEAATT
Ga0137381_104195582	3300012207	Vadose Zone Soil	MPAKPVPADPGWDEDLTWLDRDPERETWLDRAREHDDSPLEEEYEDYAPLTADELA
Ga0137376_116765572	3300012208	Vadose Zone Soil	MPPEPVPADPWWDEDLAWLDRDPEREVWLARAREHDEPPGEEEDYGYLEPFTPEELAEIDEAAADELLAARA
Ga0137378_115501941	3300012210	Vadose Zone Soil	MPNGWWYMPPEPVPADPGWDEDLTWLDRDPERQTWLDRAREHADPPEPEESGGFPGLTPDELADIEDAAADELLAVEAAASGRRGP
Ga0137377_103283642	3300012211	Vadose Zone Soil	MSLPPVPAGPGWDEDLTWLDRDPEREVWLARAREHDEPPGEDEDDGNFEPFTAEELAGIEEAA
Ga0137386_104310942	3300012351	Vadose Zone Soil	MPAKPVPADPGWDEDLTWLDRDPERETWLDRAREHDDSPLEEEYEDYAPLTADELAGIRAAAADELLAVEAA
Ga0137384_108842043	3300012357	Vadose Zone Soil	MPPEPVPADPGWDDDLAWLDRDPERETWLDRALEHDDPPKPEEFGGFPELTPDELAAIEDAAA
Ga0137361_118321621	3300012362	Vadose Zone Soil	MLPEPVSADPGWDEDLAWLDRDPERETWLARAREHDDPPEPEEYEDYAPFTGGGAGRDPRGCRR*
Ga0157340_10237071	3300012473	Arabidopsis Rhizosphere	MPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDDPPLDEPEEYEDYGSLTGEELAEIGEAA
Ga0137413_114359931	3300012924	Vadose Zone Soil	MPVSPVPADPRPDDLAWLDRDPERECWLDRAREHDEPPLDEECEDHEPLTEEDLAGIGEAAADELLAVEAASTGRRGPGQPG
Ga0134076_105073502	3300012976	Grasslands Soil	MVPSPVPADPGWDEDLTWLDRDPERETWLDRAREHDEPPGLDANEDWEDFTPLTA
Ga0163162_132006331	3300013306	Switchgrass Rhizosphere	MPPEPVPADPGWDDDLAWLDRDPERETWLDRDREHDDPPLEGEYADDTPLTEEELAEIRE
Ga0157372_117199892	3300013307	Corn Rhizosphere	MLPEPVPADPGWDEDLAWLDRDPERECWLDRAREHDEPPEPEEEYGDYAPLTEEELAGIREAAADELLAVEA
Ga0157379_115472001	3300014968	Switchgrass Rhizosphere	MPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDDSPLDVEYADYTPSPRRSWPRSA
Ga0137418_108474833	3300015241	Vadose Zone Soil	MPNGWWYMPPEPVPADPGWDEDLAWLDRDPERETWLARAREHDEPPGEDEDDGNFEPFTAEELAEIQ
Ga0137418_112865432	3300015241	Vadose Zone Soil	MPASPAPADPGWDDDLAWLDRDPQRDCWQDRAREHDEPPEPEEYEDYAPLTAEELAEIRQAAADEL
Ga0132258_126981003	3300015371	Arabidopsis Rhizosphere	MPNGWCPVPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDEPPLEEEYEDFDPLTAEELAGIREAAADVLLAVE
Ga0132256_1003875833	3300015372	Arabidopsis Rhizosphere	MWFMLLSPVPGAPGPGDLAWLDRDPERECWLDRAREHDEPPEPEEFDDYAPLTPDELAEIEDAATDDLLAVAAAASGRRGPG
Ga0132255_1026429631	3300015374	Arabidopsis Rhizosphere	VPPEPVPADPGWDEDLAWLDRDPEREHWLARAREHDEPGPEEVQEYGDHYELTAAELAEILQVTVGEVLAVEAASTGRRGPGQPGS
Ga0163161_106606101	3300017792	Switchgrass Rhizosphere	MPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDDSPLDVEYADYTPLTEEE
Ga0066667_118852632	3300018433	Grasslands Soil	MPNGWWYMPPEPDSADPGWDEDLTWLDRDPERQTWLDRAREHDDPPEPEEDEDYAPLTPGELAEIQDAAADELLAV
Ga0066662_117416132	3300018468	Grasslands Soil	MPNGWWYMPPEPVSADPGWDEDLTWLDRDPERQTWLDRAREHDDPPEPEEDEDYAPLTPGELAEI
Ga0066669_106154953	3300018482	Grasslands Soil	MPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDEPPDLDANEDWEDFTPLTAEELAEAR
Ga0193730_10756642	3300020002	Soil	MPNGWWYMPPDPVPADPGWDEDLAWLDRDPERECWLDRAREHDEPSLEEEYEDRAPL
Ga0193730_10946823	3300020002	Soil	MPPSPVPADPGWDEDLTWLDRDPERETWLNSAREHDDPPGPEESGGFPGLTPDEVAEIEDAAADE
Ga0210407_110599391	3300020579	Soil	MLPSPVPADPGWGEDLAWLDRDPEREVWLARARQHDEPPGEDEDDGYFEPFTPEELAEIDEAAA
Ga0210399_107562862	3300020581	Soil	MLPSPVPADPGWDEDLAWLDRDPEREVWLARARQHDDPPGEDEGYGDFEPFT
Ga0210408_111011841	3300021178	Soil	MLPSPVPADPRWDEDLAWLDRDPEREVWLARAREHDEPPGEEEEFADFASLT
Ga0210387_109254851	3300021405	Soil	MLPSPVPADPGWDEDLAWLDRDPEREVWLARAREHDEPPGEDEEFADFASLTAEELAEIQEAAADELL
Ga0210394_109559661	3300021420	Soil	MPPSPAPAGPGWDEDLAWLDRDPEREVWLARARQHDDPPGEDEGYGDFEPFTAEELAEIREAAAD
Ga0210402_105676422	3300021478	Soil	MPPEPVPADPGWDEDLAWLDRDPERETWLDRACEHDEPPGEDEEYGNFEPFTAEELAEI
Ga0179589_103154822	3300024288	Vadose Zone Soil	MSLPPVPADPGWDEDLAWLDRDPERKVWLARAREHDEPPGEDEGDGNFEPFTAEELAEIQEAAADELLAVKAATTG
Ga0207685_107552781	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MPPEPVPADPGWDEDLAWLDRDPERKTWLDRALEHDDPPEPEEFGGFPELTPDELAEIEDAAADELLAIEAATTG
Ga0207693_102891562	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSLPPVPADPGWDEDLAWLDRDPEREDWLARAREHDEPPGEDEDDGNLEPFTAE
Ga0207687_101458381	3300025927	Miscanthus Rhizosphere	MPPEPVPADPGWDEDLAWLDRDPERECWLDRAREHDEPPEPEQYEDHAPLTGEELAEIGE
Ga0207700_104228751	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MPNGWWYMPPEPVPADPGWDEDLAWLERDPERETWLDRAREHDDPPEPEEFGGFPELTPDELAEIEDAAADELLAIEAATDRK
Ga0207665_102744611	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDEPPPEEECADHEPLT
Ga0207668_120774071	3300025972	Switchgrass Rhizosphere	MPPEQVPADPGWDEDLAWLDGDPERETWLDRAREHDEPPGEDEEYAPLSVEELAEI
Ga0207648_106793372	3300026089	Miscanthus Rhizosphere	MPPEPVPADPGWDEDLAWLDRDPERETWLARAREHDAPPEPEESGGFPELTPDE
Ga0207698_108915982	3300026142	Corn Rhizosphere	MPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDEPPLDEEYADHEPLTGEELAEI
Ga0209153_11929881	3300026312	Soil	MPPEPVSADPGWDEDLTWLDRDPERQTWLDRAREHDDPPEPEEDEDYAPLTPGELAEIQDAAADELLAVQ
Ga0209577_102114182	3300026552	Soil	MPPSPVPADPGWDEDLAWLNRDPEREVWLARAREHDEPPGEDEDDGYFEPFTPEELAEIQEAAADELLAVKAATTGRRGPGQPG
Ga0208094_1070101	3300027094	Forest Soil	MPPSPVPADPGWDEDLAWLDRDPEREVWLARAREHDEPPGEDEDDGHFEPFTPEELAEI
Ga0209526_101963341	3300028047	Forest Soil	MPNGWWYMPPEPVPADPGWDEDLAWLDRDPEREVWLDRAREHDEPPGEDEEYGNLES
Ga0268266_102639991	3300028379	Switchgrass Rhizosphere	MPPEPVPADPGWDEDLTWLDRDPERETWLDRAREHDEPPLDEEYADHEPLTEQEL
Ga0137415_106565171	3300028536	Vadose Zone Soil	MSLPPVPADPGWDEDLAWLDRDPERECWLDRAREHDEPPLDEEYEDHEPLTAHELAGIREAAADVLLAVEAASTGRRG
Ga0307306_100179133	3300028782	Soil	MPPSPVPADPGWDEDLTWLDRDPERETWLNSAREHDDPPGPEESGGFPGLTPDEVAEIEDAAADELLAVGAATSGRRGPGQPGSARVFPG
Ga0307284_103191011	3300028799	Soil	MPPEPVPADPGWGEDLTWLDRDPERQTWLDRAREHDDPPEPEESGGFPGLTADEVADIEDAAADELLAVEAAASGRRGPGQPGS
Ga0307305_100558791	3300028807	Soil	MPNGWWYMPPEPVPADPGWDEDLAWLDRDPERESWLDRAREHDEPPLEEEYEDRAPLTEE
Ga0307296_102947241	3300028819	Soil	MLPSPVPADPGWDEDLTWLDRDPEREEWLARAREHDEPPGEDEAYEEYAPLSA
Ga0307310_105646322	3300028824	Soil	MPPSPVPADPGWDEDLTWLDRDPERETWLNSAREHDDPPGPEESGGFPGLTPDEVAEIEDAAADELLAVGAATSGRR
Ga0308309_118268812	3300028906	Soil	MPNGWWYMPPEPVPAGPGWDEELAWLDRDPEREVWLDRAREHDEPPGEDEEYGNLESFTAEELA
Ga0170820_162730912	3300031446	Forest Soil	MPPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDDSPLEVEYADYPPSPRRN
Ga0310813_114187881	3300031716	Soil	MPSEPVPADPGWDEDLAWLDRDPERETWLARAREHDEPPEPEAYEDYEPLTA
Ga0318494_101908301	3300031751	Soil	MPPEPVPADPGPDKDLAWLDRDPEREVWLDRARGHDEPPEPAEEEYEDFEPLTLEELAEIRQ
Ga0307475_115727321	3300031754	Hardwood Forest Soil	MPPSPVPADPGWDEDLAWLDRDPEREHWLARAREHDEPPGEDEEFEDFAPLTAEELAEIDEAA
Ga0307471_1014687453	3300032180	Hardwood Forest Soil	MPNGWWYMPPEPVPADPGWDEDLAWLDRDPERKTWLDRALEHDDPPEPEEFGGFPELTPDELAEIEDAAADELLAIEAATTGR
Ga0335085_102032611	3300032770	Soil	MPASPAPADPGWDGDLAWLDRDPERASWLDRAREHDEPPEPEEYEDYAPLTAEELAEIR
Ga0335079_103888181	3300032783	Soil	MPPEPVPADPGWDEDLAWLDRDPERECWLDRAREHDEPPLDEADEYGDHAPLTGQELAGISEAAADELLAVEAA
Ga0335072_114297641	3300032898	Soil	MPASPVPADPGWDEDLAWLDRDPERESWLDRAGEYDEPPAPPEQEEYEDHCPLTGEELAEIGEAAADELLAVGAATAGRRGPGQP
Ga0335083_105715611	3300032954	Soil	MPASPAPVEPGWDDDLAWLDRDPERDSWLDRAREHDEPPEPGEEEYKGCAPLAGPELTGEELAEIRQAAADELLAVEAATTGRR
Ga0335073_111215431	3300033134	Soil	MSPEPVPADPGWDEDLAWLDRDPERETWLDRAREHDDPPLEEEYEDHAPLTAEELAGIGDAAADELLAVEAATSGRRGP
Ga0335077_103778022	3300033158	Soil	MPASPASADPGPDDLAWLDRDPERDCWLDRAREHDEPPLEEAGEYGDHEPLTGQE