Metagenome / Metatranscriptome Family F084637

Basic Information
Family ID	F084637
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	50 residues
Representative Sequence	MDDQNLSDISMKGAPACGRCHMLVARYAPQVVASTGTYHRECFEAWYF
Number of Associated Samples	92
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	97.27 %
% of genes near scaffold ends (potentially truncated)	98.21 %
% of genes from short scaffolds (< 2000 bps)	91.07 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Most Common Taxonomy
Group	Unclassified (60.714 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (12.500 % of family members)
Environment Ontology (ENVO)	Unclassified (24.107 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.071 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.53% β-sheet: 14.47% Coil/Unstructured: 75.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00982	Glyco_transf_20	91.07
PF01676	Metalloenzyme	4.46
PF10370	DUF2437	1.79
PF04313	HSDR_N	0.89
PF00830	Ribosomal_L28	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	91.07
COG0227	Ribosomal protein L28	Translation, ribosomal structure and biogenesis [J]	0.89

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
All Organisms	root	All Organisms	39.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
cellular organisms	root	All Organisms → cellular organisms	39.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	39.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	24.11 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	24.11 %
Thermodesulfovibrionia	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Thermodesulfovibrionia	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	24.11 %
Thermodesulfovibrionales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Thermodesulfovibrionia → Thermodesulfovibrionales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.79 %
Thermodesulfovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Thermodesulfovibrionia → Thermodesulfovibrionales → Thermodesulfovibrionaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.79 %
Thermodesulfovibrio	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Thermodesulfovibrionia → Thermodesulfovibrionales → Thermodesulfovibrionaceae → Thermodesulfovibrio	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.79 %
Thermodesulfovibrio thiophilus	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Thermodesulfovibrionia → Thermodesulfovibrionales → Thermodesulfovibrionaceae → Thermodesulfovibrio → Thermodesulfovibrio thiophilus	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2284257	Not Available	969	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100342756	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	571	Open in IMG/M
3300003993\|Ga0055468_10019954	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300004479\|Ga0062595_101083028	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	698	Open in IMG/M
3300004479\|Ga0062595_102005939	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	559	Open in IMG/M
3300005406\|Ga0070703_10221684	Not Available	753	Open in IMG/M
3300005451\|Ga0066681_10803427	Not Available	568	Open in IMG/M
3300005458\|Ga0070681_10626712	Not Available	990	Open in IMG/M
3300005467\|Ga0070706_100780392	Not Available	885	Open in IMG/M
3300005468\|Ga0070707_100261971	All Organisms → cellular organisms → Bacteria	1682	Open in IMG/M
3300005536\|Ga0070697_101954271	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	525	Open in IMG/M
3300005557\|Ga0066704_10457106	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	843	Open in IMG/M
3300005559\|Ga0066700_10062888	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2325	Open in IMG/M
3300005569\|Ga0066705_10789400	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	567	Open in IMG/M
3300005713\|Ga0066905_100213475	All Organisms → cellular organisms → Bacteria	1453	Open in IMG/M
3300005713\|Ga0066905_101579266	Not Available	600	Open in IMG/M
3300005843\|Ga0068860_101721486	Not Available	649	Open in IMG/M
3300006049\|Ga0075417_10682842	Not Available	527	Open in IMG/M
3300006049\|Ga0075417_10747643	Not Available	504	Open in IMG/M
3300006173\|Ga0070716_100369205	Not Available	1022	Open in IMG/M
3300006797\|Ga0066659_10258033	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1308	Open in IMG/M
3300006806\|Ga0079220_10520246	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300006844\|Ga0075428_102107870	Not Available	583	Open in IMG/M
3300006844\|Ga0075428_102681898	Not Available	508	Open in IMG/M
3300006845\|Ga0075421_100444174	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300006846\|Ga0075430_100075374	All Organisms → cellular organisms → Bacteria → Nitrospirae → Thermodesulfovibrionia → Thermodesulfovibrionales → Thermodesulfovibrionaceae → Thermodesulfovibrio → Thermodesulfovibrio thiophilus	2828	Open in IMG/M
3300006847\|Ga0075431_101730328	Not Available	582	Open in IMG/M
3300006852\|Ga0075433_10314878	Not Available	1385	Open in IMG/M
3300006853\|Ga0075420_100787550	Not Available	819	Open in IMG/M
3300006853\|Ga0075420_101446971	Not Available	589	Open in IMG/M
3300006904\|Ga0075424_102416019	Not Available	551	Open in IMG/M
3300006914\|Ga0075436_101140658	Not Available	587	Open in IMG/M
3300007004\|Ga0079218_11102608	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300007004\|Ga0079218_12358485	Not Available	624	Open in IMG/M
3300007265\|Ga0099794_10380773	Not Available	736	Open in IMG/M
3300009087\|Ga0105107_10652554	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	732	Open in IMG/M
3300009090\|Ga0099827_11842695	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	527	Open in IMG/M
3300009156\|Ga0111538_13411014	Not Available	552	Open in IMG/M
3300009176\|Ga0105242_11085423	Not Available	813	Open in IMG/M
3300009177\|Ga0105248_12697373	Not Available	567	Open in IMG/M
3300009444\|Ga0114945_10092873	All Organisms → cellular organisms → Bacteria	1688	Open in IMG/M
3300009792\|Ga0126374_10794287	Not Available	722	Open in IMG/M
3300009792\|Ga0126374_11604392	Not Available	538	Open in IMG/M
3300010043\|Ga0126380_10417276	Not Available	1003	Open in IMG/M
3300010046\|Ga0126384_10557346	Not Available	997	Open in IMG/M
3300010046\|Ga0126384_12397442	Not Available	511	Open in IMG/M
3300010047\|Ga0126382_10383858	Not Available	1089	Open in IMG/M
3300010047\|Ga0126382_11436804	Not Available	631	Open in IMG/M
3300010337\|Ga0134062_10020647	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2518	Open in IMG/M
3300010358\|Ga0126370_10881721	Not Available	806	Open in IMG/M
3300010358\|Ga0126370_12254600	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	538	Open in IMG/M
3300010359\|Ga0126376_10625989	Not Available	1022	Open in IMG/M
3300010360\|Ga0126372_12769459	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	542	Open in IMG/M
3300010397\|Ga0134124_11990720	Not Available	618	Open in IMG/M
3300010403\|Ga0134123_12499697	Not Available	582	Open in IMG/M
3300011269\|Ga0137392_10658807	Not Available	868	Open in IMG/M
3300012081\|Ga0154003_1067448	Not Available	612	Open in IMG/M
3300012203\|Ga0137399_10666467	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	875	Open in IMG/M
3300012349\|Ga0137387_10760926	Not Available	701	Open in IMG/M
3300012918\|Ga0137396_11233438	Not Available	524	Open in IMG/M
3300012925\|Ga0137419_10185478	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300012925\|Ga0137419_11387989	Not Available	593	Open in IMG/M
3300012925\|Ga0137419_11750550	Not Available	531	Open in IMG/M
3300012948\|Ga0126375_11744110	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	541	Open in IMG/M
3300014272\|Ga0075327_1059132	Not Available	1138	Open in IMG/M
3300014326\|Ga0157380_13277222	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	517	Open in IMG/M
3300015241\|Ga0137418_10398330	Not Available	1124	Open in IMG/M
3300015371\|Ga0132258_12956915	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1179	Open in IMG/M
3300015371\|Ga0132258_12992429	Not Available	1171	Open in IMG/M
3300015372\|Ga0132256_102660393	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	600	Open in IMG/M
3300015373\|Ga0132257_103214764	Not Available	595	Open in IMG/M
3300015373\|Ga0132257_103338496	Not Available	584	Open in IMG/M
3300018028\|Ga0184608_10144134	Not Available	1023	Open in IMG/M
3300018468\|Ga0066662_11774867	Not Available	646	Open in IMG/M
3300020199\|Ga0179592_10483070	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	532	Open in IMG/M
3300021073\|Ga0210378_10033855	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2034	Open in IMG/M
3300021445\|Ga0182009_10670255	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	560	Open in IMG/M
3300022756\|Ga0222622_10205046	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300025327\|Ga0209751_10877957	Not Available	691	Open in IMG/M
3300025922\|Ga0207646_10027938	All Organisms → cellular organisms → Bacteria	5142	Open in IMG/M
3300026046\|Ga0208780_1016418	Not Available	671	Open in IMG/M
3300026295\|Ga0209234_1185606	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	722	Open in IMG/M
3300026310\|Ga0209239_1356419	Not Available	512	Open in IMG/M
3300026535\|Ga0256867_10004165	All Organisms → cellular organisms → Bacteria	6299	Open in IMG/M
3300027384\|Ga0209854_1108084	Not Available	500	Open in IMG/M
3300027395\|Ga0209996_1053312	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300027748\|Ga0209689_1363223	Not Available	553	Open in IMG/M
3300027775\|Ga0209177_10032601	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300027873\|Ga0209814_10492114	Not Available	543	Open in IMG/M
3300027903\|Ga0209488_10494381	Not Available	897	Open in IMG/M
3300028536\|Ga0137415_10559008	Not Available	954	Open in IMG/M
3300028592\|Ga0247822_10827266	Not Available	756	Open in IMG/M
3300030336\|Ga0247826_10019105	All Organisms → cellular organisms → Bacteria	3195	Open in IMG/M
3300030606\|Ga0299906_10679785	Not Available	774	Open in IMG/M
3300031548\|Ga0307408_100742001	Not Available	886	Open in IMG/M
3300031548\|Ga0307408_100775969	Not Available	868	Open in IMG/M
3300031720\|Ga0307469_11223433	Not Available	711	Open in IMG/M
3300031720\|Ga0307469_12325213	Not Available	523	Open in IMG/M
3300031731\|Ga0307405_11760603	Not Available	550	Open in IMG/M
3300031740\|Ga0307468_100872739	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	776	Open in IMG/M
3300031740\|Ga0307468_100938294	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	754	Open in IMG/M
3300031820\|Ga0307473_10237040	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1109	Open in IMG/M
3300031820\|Ga0307473_11123263	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	580	Open in IMG/M
3300031949\|Ga0214473_11069833	Not Available	846	Open in IMG/M
3300032002\|Ga0307416_100431516	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300032005\|Ga0307411_10535352	Not Available	997	Open in IMG/M
3300032005\|Ga0307411_12046578	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	535	Open in IMG/M
3300032211\|Ga0310896_10030459	All Organisms → cellular organisms → Bacteria	2023	Open in IMG/M
3300033500\|Ga0326730_1095414	Not Available	554	Open in IMG/M
3300034668\|Ga0314793_057610	Not Available	728	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.32%
Host-Associated	Host-Associated	27.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.07%
Plants	Host-Associated → Plants	26.79%
Aquatic	Environmental → Aquatic	6.25%
Fungi	Host-Associated → Fungi	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.43%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.36%
Freshwater	Environmental → Aquatic → Freshwater	2.68%
Sediment	Environmental → Aquatic → Sediment	1.79%
Marine	Environmental → Aquatic → Marine	0.89%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.89%
Peat	Environmental → Terrestrial → Peat	0.89%
Mycelium	Host-Associated → Fungi → Mycelium	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.54%
Loam	Environmental → Terrestrial → Soil → Loam	9.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.57%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.79%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.89%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.89%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.89%
Sand	Environmental → Terrestrial → Soil → Sand	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.36%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.36%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.57%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.79%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.89%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.89%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.89%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.25%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	5.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.79%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.89%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.89%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.89%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.89%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.89%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012081	Attine ant fungus gardens microbial communities from Florida, USA - TSFL087 MetaG	Host-Associated	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026046	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1 (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027384	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027395	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033500	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF7AN SIP fraction	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_22842572	3300000033	Soil	MEEQNLSDISMKGAPACGQCHMLVARYAPQVVASTGTYHRECFEAWXFGRYKKRPALLAGAG
INPhiseqgaiiFebDRAFT_1003427562	3300000364	Soil	MEDEKLTDISMKGVPPCGRCHMLVARYAPQVVATTGTYHRECYEAWYFGRHGRRPTLL
Ga0055468_100199542	3300003993	Natural And Restored Wetlands	MEEEKLTDISMKGAPACGRCHMLVARYAPQVVASTGTYHRECFEAWYFGRYGR
Ga0062595_1010830282	3300004479	Soil	MEETNVIDIDMKGAPACGRCHMLVARFAPQVSASTGTYHRECFEAWYFGRNGKRP
Ga0062595_1020059391	3300004479	Soil	MEDEKLTDISMKGVPPCGRCHMLVARYAPQVVATTGTYHRECYEAWYFGRHGRRPTLLAGTNG
Ga0070703_102216841	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MEEQNLSDISMKGAPACGRCHMLVARYAPQVAASTGTYHRECFEAWYF
Ga0066681_108034272	3300005451	Soil	MDDQNLSDISMKGAPACGRCHMLVARFAPQVVASTGTYHRECFEAWYF
Ga0070681_106267121	3300005458	Corn Rhizosphere	MDDQKLNDVPDVPMKGAMPCVRCHMLVARYAPQVLASTGTYHRECFEAWYF
Ga0070706_1007803921	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MDEDNVIDINMKGAPACGRCFMLVARYAPQVEAPTGTYHRECFEAWYFG
Ga0070707_1002619711	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MDEDNVVDINMKGAPACGRCFMLVARYAPQVEAPTGTYHRECFEAWYFGRFGRRPRLYAD
Ga0070697_1019542712	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MVPGREGIEGAMDEQNVIDIDMKGAPACGRCFMLVARFAPQVVASSGTYHGECFEAWYFGRYRK
Ga0066704_104571061	3300005557	Soil	MEEEELTEISMKDAPPCGRCHMLVARYAPQVVAITGTYHRECYEAWYFGRFGRRP
Ga0066700_100628882	3300005559	Soil	MDDQNLSDISMKGAPACGRCHMLVARFAPQVVASSGTYHRECFEAWYFGRYG
Ga0066705_107894002	3300005569	Soil	MDDQNLSDISMKGAPACGRCHMLVARYAPQVVASTGTYHRECFEAWYFGRYGKR
Ga0066905_1002134752	3300005713	Tropical Forest Soil	MDETINDIDMKGADTCGRCFMLVARFAPQVIVPSGTYHRECYEAWYFGRFGKR
Ga0066905_1015792661	3300005713	Tropical Forest Soil	MEDEKLTEISMKGAPPCGRCHMLVARYAPQVVASTGTYHRECYEAWYFGRH
Ga0068860_1017214861	3300005843	Switchgrass Rhizosphere	MEDQNLSDISMKGAPACGRCHMLVARYAPQVAASTGTYHRECFEAWYFG
Ga0075417_106828422	3300006049	Populus Rhizosphere	MDEQNLTDISMKGAPACGRCHMLVARYAPQVVASTGTY
Ga0075417_107476432	3300006049	Populus Rhizosphere	MDDRNVIDIDMKGAPACGRCHMLVARYAPQVLTSGTTYHRECFE
Ga0070716_1003692051	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MDDQNLSDISMKGAPACGRCHMLVARFAPQVVASSGTYHRECFEAWYFGRYGKRPA
Ga0066659_102580332	3300006797	Soil	MEDEKLTEISMKGAPPCGRCHMLVARYAPQVVATTGTYHRECYEAWYFGHYGRRPSLLAG
Ga0079220_105202462	3300006806	Agricultural Soil	MEETNVIDIDMKGAPACGRCHMLVARFAPQVNASTGTYHR
Ga0075428_1021078701	3300006844	Populus Rhizosphere	MDDQNLSDISMKGAPACGRCHMLVARYAPQVVASTGTYHR
Ga0075428_1026818981	3300006844	Populus Rhizosphere	MEDEKLTDISMKGVPPCGRCHMLVARYAPQVVAGTGT
Ga0075421_1004441742	3300006845	Populus Rhizosphere	MEDEKLTDISMKGVPPCGRCHMLVARYAPQVVAGTGTYHRECYEAWYFGRHGRRPTLLA
Ga0075430_1000753741	3300006846	Populus Rhizosphere	MEDEKLTDISMKGAPACGRCHMLVARFAPQVVASTGTYHRECFEAWYFGRYGRRPS
Ga0075431_1017303282	3300006847	Populus Rhizosphere	MDEDKLSDISMKGAPPCRGCHMLVARYAPQVVASAGTYHRECFEAWYFGRY
Ga0075433_103148782	3300006852	Populus Rhizosphere	MEDQNVIDIDMKGAPACARCFMLVARYAPQVVASSGTYHRECFEAWYFGRY
Ga0075420_1007875502	3300006853	Populus Rhizosphere	MEDEKLSDISMKGVPPCGRCHMLVARYAPQVVATT
Ga0075420_1014469712	3300006853	Populus Rhizosphere	MDDDQVLKDVPDVPMKGAAACVRCHMLVARYAPQVVASTGAYHRECFEAWYFGRYGK
Ga0075424_1024160191	3300006904	Populus Rhizosphere	MDDRNVIDIDMKGAPACGRCHMLVARYAPQVLTSGTTYHR
Ga0075436_1011406581	3300006914	Populus Rhizosphere	MEDRLEATEASNVTDIKMGRNNTCGRCHMLVARFAPQVLASNGVYHRECYEAWYF
Ga0079218_111026081	3300007004	Agricultural Soil	MRRTMEDRKVTDVNMKGAPACGRCFMLVARYAPQVVAAANTYHRECYEAWYFGRHGKRPR
Ga0079218_123584852	3300007004	Agricultural Soil	MEETDIQMKGAPPCGRCHMLVARYAPQVVASTGTYHRECYEAWYFGRFGKRPALL
Ga0099794_103807731	3300007265	Vadose Zone Soil	MEDEKLEKLTEVSMKGAPPCGRCHMLVARYAPQVVATTGTYHRECYEAWYFGRYGRRPSLLAGI
Ga0105107_106525542	3300009087	Freshwater Sediment	MEETTDIQMKGAPPCGRCHMLVARYAPQVVASTGTYHRECYEAWYFGRFGKRPSLLA
Ga0099827_118426951	3300009090	Vadose Zone Soil	MEEDNVIDINMKGAPACGRCFMLVARFAPQVEASTGTYHRECYEAWY
Ga0111538_134110141	3300009156	Populus Rhizosphere	MDDQNLSDISMKGAPACGRCHMLVARYAPQVVASTGTYHRECFEAWY
Ga0105242_110854231	3300009176	Miscanthus Rhizosphere	MDEQNLSDISMKGAPACGRCHMLVARFAPQVVASTGTYHRECFEAWYFGRYGKRPALTA
Ga0105248_126973731	3300009177	Switchgrass Rhizosphere	MDDQNLSDISMKGAPACGRSHMLVARFAPQVVASTGTYHRECFEAWY
Ga0114945_100928731	3300009444	Thermal Springs	MEDEKVTEISMKGAPACGRCHMLVARYAPQVLASSGVYHRE
Ga0126374_107942871	3300009792	Tropical Forest Soil	MEDEKLTDISMKGVPPCGRCHMLVARYAPQVVAGTGTYHRECY
Ga0126374_116043921	3300009792	Tropical Forest Soil	MDDDSRNLSDVSMKGVPACARCHMLVARYAPQVVASSATYHRECYEAWYF
Ga0126380_104172761	3300010043	Tropical Forest Soil	MDEQNLSDISMKGAPACGRCHMLVARFAPQVVASTGTYHRVCVEAWYF
Ga0126384_105573462	3300010046	Tropical Forest Soil	MDEQNVIDIDMKGAPACGRCFMLVARYAPQVVASSGTYHRECFEAWYFGRYRKRPRLIAGSQRD
Ga0126384_123974422	3300010046	Tropical Forest Soil	MDDQNVIDIDMKGAPACGRCFMLVARYAPQVQAPTGTYHRECYEAWYFGRY
Ga0126382_103838581	3300010047	Tropical Forest Soil	MVPGREGIEGAMDEQNVIDIDMKGAPACGRCFMLVARYAPQVEAPTGTYHRECFEAWYF
Ga0126382_114368042	3300010047	Tropical Forest Soil	MDEQNVIDIDMKGSPACGRCFMLVARYAPQVVASSGTYHRECFEAWYFGRYRK
Ga0134062_100206471	3300010337	Grasslands Soil	MEDDKVTEISMKGAPPCGRCHMLVARYAPQVVASTGTYHRECYEAWYFGRH
Ga0126370_108817212	3300010358	Tropical Forest Soil	MEDQGVIDIDMKGAPPCGRCHMLVARYAPQVNASS
Ga0126370_122546002	3300010358	Tropical Forest Soil	MDEQNVIDIDMKGAPACGRCFMLVARYAPQVVASSGTYHRECFEAWYFGRYR
Ga0126376_106259891	3300010359	Tropical Forest Soil	MDDQNLSDISMKGAPACGRCHMLVARFAPQVVASTGTYHRECFEAWYFGRY
Ga0126372_127694592	3300010360	Tropical Forest Soil	MDEQNVIDIDMKGAPACGRCFMLVARYAPQVLASTGTYHRECFEAWYFGRYRKRPRLIAGGQG
Ga0134124_119907202	3300010397	Terrestrial Soil	VDDQNLSDISMKGAPACARCHMLVARFAPQVVASAG
Ga0134123_124996971	3300010403	Terrestrial Soil	MEDEKLTDISMKGAPACGRCHMLVARFAPQVVASAGTYHRECFEAWYFGRHGRRPSL
Ga0137392_106588072	3300011269	Vadose Zone Soil	MDEHNVIDIDMKGAPACGQCFMLVARYAPQVVASSGTYHRECFEAWYFGRYRK
Ga0154003_10674482	3300012081	Attine Ant Fungus Gardens	MEEDNVVDVDMKGAPACGRCFMLVARYAPQVQAPTGTYHRECYEAWYFGRFGRRPRLHAN
Ga0137399_106664672	3300012203	Vadose Zone Soil	MEEEKLTEISMKGAPPCGRCHMLVARYAPQVVANTGTYHRECYEAWYFGRYG
Ga0137387_107609261	3300012349	Vadose Zone Soil	MDEQNLSDISMKGAPACGRCHMLVARYAPQVVASTGTYHREC
Ga0137396_112334382	3300012918	Vadose Zone Soil	MDDQNVIDIDMKGAPACGRCFMLVARYAPQVEAPTGTYHRECFEAW
Ga0137419_101854782	3300012925	Vadose Zone Soil	MDEQNLSDISMKGAPACGRCHMLVARFAPQVVASTGTYHRECFEAWYFGRYGKRP
Ga0137419_113879891	3300012925	Vadose Zone Soil	MEDEKLTEISMKGAPPCGRCHMLVARYAPQVVATTGTYHRECYEAWYFGRYGRRPS
Ga0137419_117505501	3300012925	Vadose Zone Soil	MVPGREGIEGAMDEQNVIDIDMKGAPACGRCFMLVARFAPQVVASSGTYHRECFEA
Ga0126375_117441102	3300012948	Tropical Forest Soil	MDDQILKDVPDVPMKGAMPCVRCHMLVARFAPQVVASTGTYHRECFETWYFGRYGK
Ga0075327_10591322	3300014272	Natural And Restored Wetlands	MDDQKMTDISMKGAPACGRCHMLVARYAPQVVASTGTYHRECYEAWYFGRYG
Ga0157380_132772222	3300014326	Switchgrass Rhizosphere	MEDQNLSDISMKGAPACGRCHMLVARYAPQVAASTGTYHRECFE
Ga0137418_103983302	3300015241	Vadose Zone Soil	MEDEKLTEISMKGAPPCGRCHMLVARYAPQVVATTGTYHRECYEAWYFGRYGRR
Ga0132258_129569152	3300015371	Arabidopsis Rhizosphere	MEDQNLSDISMKGAPACGRCHMLVARFAPQVNASSATYHRECF
Ga0132258_129924291	3300015371	Arabidopsis Rhizosphere	MVDDQNLSDISMKGAPACARCHMLVARFAPQVVASAGTYHRECFEAWYVGRNGKRPVLLAGA
Ga0132256_1026603931	3300015372	Arabidopsis Rhizosphere	MEETNVIDIDMKGAPACGRCHMLVARFAPQVTAPTATYHRECYQAW
Ga0132257_1032147642	3300015373	Arabidopsis Rhizosphere	MDDQNLSDISMKGAPACGRCHMLVARFAPQVVASTGTYHRECFEAWYFGRYGKRP
Ga0132257_1033384962	3300015373	Arabidopsis Rhizosphere	MEDEKLTDISMKGVPPCGRCHMLVARYAPQVVAGTGTYHRECYEAWYFGRHG
Ga0184608_101441342	3300018028	Groundwater Sediment	MDEQNLSDISMKGAPACGRCHMLVARYAPQVAASTGAYHRECFETWYFGRYGKRPMLLAG
Ga0066662_117748672	3300018468	Grasslands Soil	MDDQNLSDISMKGAPACGRCYMLVARFAPQVVASTGTYHRECFEAWYFGRYGKRPALTAG
Ga0179592_104830701	3300020199	Vadose Zone Soil	MEDEKLTEISMKGAPPCGRCHMLVARYAPQVVATTGTYHRECYEAWYFGRYGRRPSLLPG
Ga0210378_100338551	3300021073	Groundwater Sediment	MDEQNLSDISMKGAPACGRCHMLVARYAPQVAASTGTYHREC
Ga0182009_106702551	3300021445	Soil	MVDDQNLSDISMKGAPACARCHMLVARFAPQVVASAGTYHRECFEAWYVGRNGKRP
Ga0222622_102050461	3300022756	Groundwater Sediment	MDDQNLSDISMKGAPACARCHMLVARYAPQVAASTEAYHRECFE
Ga0209751_108779571	3300025327	Soil	MDEQNLSDISMKGAPACGRCHMLVARYAPQVAASTGTYHRECFEAWYFGRYGKRPALLAGPDG
Ga0207646_100279381	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MDDQNVIDIDMKGAPACGRCFMLVARYAPQVAAPTGTYHRECYEAWYF
Ga0207646_113726072	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MDSTSYEEQGTIDAEKMRAGTCGRCHMLVARYAPQVIASSVI
Ga0208780_10164182	3300026046	Natural And Restored Wetlands	MEEEKLTDISMKGAPACGRCHMLVARYAPQVVASTGTYHRECFEAW
Ga0209234_11856062	3300026295	Grasslands Soil	MEDDKVTEISMKGAPPCGRCHMLVARYAPQVVASTGTYHRECYEAWYFGR
Ga0209239_13564192	3300026310	Grasslands Soil	MEDEKLTEISMKGAPPCGRCHMLVARYAPQVVAITGTYHRECYEAWYFGR
Ga0256867_100041651	3300026535	Soil	MEDRTVTDISMKGAPACGRCHMLVARYASQVVASTGTYHRECFEAWYFGRYGKRPALL
Ga0209854_11080842	3300027384	Groundwater Sand	MRRAMENQKAPACVRCFMLVARYAPQVVTPAATYHRECYEAWYFGRHGKRP
Ga0209996_10533122	3300027395	Arabidopsis Thaliana Rhizosphere	MEDEKLTDISMKGAPPCGRCHMLVARYAPQVVASTGTYHRECFEA
Ga0209689_13632232	3300027748	Soil	MDDQNLSDISMKGAPACGRCHMLVARFAPQVVASSGTYHRECFEAWYF
Ga0209177_100326011	3300027775	Agricultural Soil	MDDDKLTDISMKGAPPCGRCHMLVARYAPQVVASTGTYHRECYEAWYF
Ga0209726_103648822	3300027815	Groundwater	MDSSNVEEQGTIDIDKMRAGTCGRCHMLVARYAPQVIASSAIYHRECYEAWYFGRYGRR
Ga0209814_104921141	3300027873	Populus Rhizosphere	MEDEKLTDISMKGVPPCGRCHMLVARYAPQVVAGTG
Ga0209488_104943812	3300027903	Vadose Zone Soil	MEDEKLTEISMKGAPPCGRCHMLVARYAPQVVATTGTYHRECYEAWYFGHYGRRPSLLGAGDPK
Ga0137415_105590082	3300028536	Vadose Zone Soil	MDEHNVIDIDMKGAPACGRCFMLVARYAPQVVASSGTYHR
Ga0247822_108272662	3300028592	Soil	MEDEKLTDISMKGAPACGRCHMLVARYAPQVAASTGTYH
Ga0247826_100191053	3300030336	Soil	MEDQNLSDISMKGAPACGRCHMLVARYAPQVVASTG
Ga0299906_106797851	3300030606	Soil	MDDLNLTDISMKGAPACGRCHMLVARYAPQVVASTGTYHRECFE
Ga0307408_1007420011	3300031548	Rhizosphere	MEEEKLTDISMKGAPACGRCHMLVARYAPQVVASTG
Ga0307408_1007759692	3300031548	Rhizosphere	MEDEKLTDISMKGAPACGRCHMLVARYAPQVAASTGTYHRE
Ga0307469_112234332	3300031720	Hardwood Forest Soil	MEDEKLTEISMKGVPPCGRCHMLVARYAPQVVAPAGTYHRECYEAWYFGRHGRRPTLLAGPN
Ga0307469_123252131	3300031720	Hardwood Forest Soil	MDDQNLSDISMKGAPACGRCHMLVARFAPQVVASTGT
Ga0307405_117606031	3300031731	Rhizosphere	MATMDETNLSDISMKGAPACGRCHMLVARYAPQVAASTGTYHRE
Ga0307468_1008727391	3300031740	Hardwood Forest Soil	MDEQNLSDISMKGAPACGRCHMLVARFAPQVVASTG
Ga0307468_1009382942	3300031740	Hardwood Forest Soil	MDDQNLSDISMKGAPACGRCHMLVARFAPQVVASTGTYHRECF
Ga0307473_102370402	3300031820	Hardwood Forest Soil	MDDQNLSDISMKGAPACGRCHMLVARFAPQVVASTGTYHRECFEAWYFG
Ga0307473_111232632	3300031820	Hardwood Forest Soil	MDDDQVLRDVPDVPMKGAAACVRCHMLVARYAPQVVASTGTYHRECFEAWYFGRYGKRPVLLAG
Ga0214473_110698332	3300031949	Soil	MDEDHVVDMNMKGAPACGRCFMLVARYASQVEAPTGTYHRECYEAWYFGRFGRRPRLHANGSR
Ga0307416_1004315161	3300032002	Rhizosphere	MEDEKLTDISMKGAAACGRCHMLVARYAPQVVASTGTYHRECFEAWYFGRYGRR
Ga0307411_105353521	3300032005	Rhizosphere	MEDEKLTDISMKGAPACGRCHMLVARYAPQVVASTGTYHRECFEAWY
Ga0307411_120465782	3300032005	Rhizosphere	MEDEKLTDISMKGAPACGRCHMLVARYAPQVAASTGTYHRECFEAWYFGRYGRRPSLLAG
Ga0310896_100304591	3300032211	Soil	MEEQNLSDISMKGAPACGRCHMLVARYAPQVVASTGTYHRECFEAWYFGRYG
Ga0326730_10954141	3300033500	Peat Soil	MDDQNLSDISMKGAPACGRCHMLVARYAPQVVASTGTYHRECFEAWYF
Ga0314793_057610_616_726	3300034668	Soil	MEEQNLSDISMKGAPACGRCHMLVARYAPQVVASTGT

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084637

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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