Basic Information | |
---|---|
Family ID | F084634 |
Family Type | Metagenome |
Number of Sequences | 112 |
Average Sequence Length | 88 residues |
Representative Sequence | MAASVYSRALQKAAELLGGREKLSKLLQVPGAEIDKWIADQAKPPREIFLRIVDLILDETGPSGDAGDAQEAPPSRDAAGASRYLD |
Number of Associated Samples | 89 |
Number of Associated Scaffolds | 112 |
Quality Assessment | |
---|---|
Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 48.21 % |
% of genes near scaffold ends (potentially truncated) | 22.32 % |
% of genes from short scaffolds (< 2000 bps) | 77.68 % |
Associated GOLD sequencing projects | 77 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.61 |
Hidden Markov Model |
---|
Powered by Skylign |
Most Common Taxonomy | |
---|---|
Group | Bacteria (82.143 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
---|---|
GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (25.000 % of family members) |
Environment Ontology (ENVO) | Unclassified (38.393 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (48.214 % of family members) |
⦗Top⦘ |
⦗Top⦘ |
Predicted Topology & Secondary Structure | |||||
---|---|---|---|---|---|
Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 37.72% β-sheet: 0.00% Coil/Unstructured: 62.28% | Feature Viewer |
|
|||||
Powered by Feature Viewer |
Structure Viewer | |
---|---|
| |
Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.61 |
Powered by PDBe Molstar |
⦗Top⦘ |
Pfam ID | Name | % Frequency in 112 Family Scaffolds |
---|---|---|
PF00072 | Response_reg | 13.39 |
PF06202 | GDE_C | 7.14 |
PF00534 | Glycos_transf_1 | 4.46 |
PF08241 | Methyltransf_11 | 2.68 |
PF08448 | PAS_4 | 1.79 |
PF14742 | GDE_N_bis | 1.79 |
PF00535 | Glycos_transf_2 | 0.89 |
PF01070 | FMN_dh | 0.89 |
PF06165 | Glyco_transf_36 | 0.89 |
PF01569 | PAP2 | 0.89 |
PF13439 | Glyco_transf_4 | 0.89 |
PF13649 | Methyltransf_25 | 0.89 |
COG ID | Name | Functional Category | % Frequency in 112 Family Scaffolds |
---|---|---|---|
COG3408 | Glycogen debranching enzyme (alpha-1,6-glucosidase) | Carbohydrate transport and metabolism [G] | 7.14 |
COG0069 | Glutamate synthase domain 2 | Amino acid transport and metabolism [E] | 0.89 |
COG1304 | FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase | Energy production and conversion [C] | 0.89 |
COG3459 | Cellobiose phosphorylase | Carbohydrate transport and metabolism [G] | 0.89 |
⦗Top⦘ |
Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 82.14 % |
Unclassified | root | N/A | 17.86 % |
Visualization |
---|
Powered by ApexCharts |
Scaffold | Taxonomy | Length | IMG/M Link |
---|---|---|---|
3300002906|JGI25614J43888_10006744 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3704 | Open in IMG/M |
3300002907|JGI25613J43889_10000677 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 8109 | Open in IMG/M |
3300002917|JGI25616J43925_10043678 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1957 | Open in IMG/M |
3300002917|JGI25616J43925_10308419 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 589 | Open in IMG/M |
3300003267|soilL1_10029437 | All Organisms → cellular organisms → Bacteria | 2848 | Open in IMG/M |
3300004114|Ga0062593_100945735 | Not Available | 877 | Open in IMG/M |
3300004157|Ga0062590_102703431 | Not Available | 529 | Open in IMG/M |
3300005174|Ga0066680_10278550 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1066 | Open in IMG/M |
3300005178|Ga0066688_10844097 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 569 | Open in IMG/M |
3300005179|Ga0066684_10974939 | Not Available | 549 | Open in IMG/M |
3300005181|Ga0066678_10027315 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 3066 | Open in IMG/M |
3300005336|Ga0070680_100927137 | Not Available | 752 | Open in IMG/M |
3300005341|Ga0070691_10419232 | Not Available | 758 | Open in IMG/M |
3300005343|Ga0070687_100709906 | Not Available | 703 | Open in IMG/M |
3300005434|Ga0070709_10144566 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1637 | Open in IMG/M |
3300005441|Ga0070700_100989311 | Not Available | 691 | Open in IMG/M |
3300005444|Ga0070694_100458941 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1007 | Open in IMG/M |
3300005446|Ga0066686_10247220 | Not Available | 1204 | Open in IMG/M |
3300005471|Ga0070698_100133965 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2432 | Open in IMG/M |
3300005537|Ga0070730_10027241 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 4352 | Open in IMG/M |
3300005552|Ga0066701_10741247 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 588 | Open in IMG/M |
3300005555|Ga0066692_10843154 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 563 | Open in IMG/M |
3300005556|Ga0066707_10938836 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 529 | Open in IMG/M |
3300005559|Ga0066700_10480599 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 869 | Open in IMG/M |
3300005568|Ga0066703_10915362 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 500 | Open in IMG/M |
3300005569|Ga0066705_10189740 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 1282 | Open in IMG/M |
3300005576|Ga0066708_10455733 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 822 | Open in IMG/M |
3300005586|Ga0066691_10290776 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 963 | Open in IMG/M |
3300005587|Ga0066654_10228359 | All Organisms → cellular organisms → Bacteria | 976 | Open in IMG/M |
3300005598|Ga0066706_10040802 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 3062 | Open in IMG/M |
3300005598|Ga0066706_10858938 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 711 | Open in IMG/M |
3300006031|Ga0066651_10255855 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 929 | Open in IMG/M |
3300006031|Ga0066651_10346613 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 797 | Open in IMG/M |
3300006032|Ga0066696_10155628 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1429 | Open in IMG/M |
3300006046|Ga0066652_100211244 | All Organisms → cellular organisms → Bacteria | 1676 | Open in IMG/M |
3300006173|Ga0070716_100531422 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 873 | Open in IMG/M |
3300006794|Ga0066658_10584443 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 608 | Open in IMG/M |
3300006794|Ga0066658_10837244 | Not Available | 522 | Open in IMG/M |
3300006796|Ga0066665_10100672 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 2118 | Open in IMG/M |
3300006852|Ga0075433_10230273 | Not Available | 1646 | Open in IMG/M |
3300006854|Ga0075425_101213321 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 857 | Open in IMG/M |
3300006854|Ga0075425_101740472 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 701 | Open in IMG/M |
3300006903|Ga0075426_10113629 | Not Available | 1944 | Open in IMG/M |
3300006903|Ga0075426_11423721 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 527 | Open in IMG/M |
3300009012|Ga0066710_100175040 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 3023 | Open in IMG/M |
3300009012|Ga0066710_103884587 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 560 | Open in IMG/M |
3300009137|Ga0066709_101396337 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1019 | Open in IMG/M |
3300009137|Ga0066709_102621070 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 675 | Open in IMG/M |
3300009143|Ga0099792_10040772 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 2212 | Open in IMG/M |
3300010323|Ga0134086_10185466 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 772 | Open in IMG/M |
3300010373|Ga0134128_11977173 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 642 | Open in IMG/M |
3300010373|Ga0134128_12921238 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 526 | Open in IMG/M |
3300010399|Ga0134127_10125698 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2290 | Open in IMG/M |
3300010401|Ga0134121_10381327 | Not Available | 1269 | Open in IMG/M |
3300010401|Ga0134121_10496874 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 1123 | Open in IMG/M |
3300010403|Ga0134123_12639761 | Not Available | 570 | Open in IMG/M |
3300012203|Ga0137399_10288971 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1352 | Open in IMG/M |
3300012212|Ga0150985_106639097 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 538 | Open in IMG/M |
3300012212|Ga0150985_112643683 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 551 | Open in IMG/M |
3300012212|Ga0150985_115825962 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1186 | Open in IMG/M |
3300012212|Ga0150985_119100801 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 887 | Open in IMG/M |
3300012212|Ga0150985_122793587 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1199 | Open in IMG/M |
3300012285|Ga0137370_10433798 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 799 | Open in IMG/M |
3300012354|Ga0137366_10280886 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1229 | Open in IMG/M |
3300012469|Ga0150984_103847834 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 836 | Open in IMG/M |
3300012469|Ga0150984_105690274 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 763 | Open in IMG/M |
3300012469|Ga0150984_112621214 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 708 | Open in IMG/M |
3300012685|Ga0137397_10032221 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 3738 | Open in IMG/M |
3300012918|Ga0137396_10181507 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 1543 | Open in IMG/M |
3300012922|Ga0137394_10326095 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1311 | Open in IMG/M |
3300012922|Ga0137394_10384977 | Not Available | 1196 | Open in IMG/M |
3300012922|Ga0137394_10774119 | All Organisms → cellular organisms → Bacteria | 805 | Open in IMG/M |
3300012923|Ga0137359_10653349 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 919 | Open in IMG/M |
3300012925|Ga0137419_10075701 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 2259 | Open in IMG/M |
3300012925|Ga0137419_10671783 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 838 | Open in IMG/M |
3300012927|Ga0137416_10523324 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1024 | Open in IMG/M |
3300012929|Ga0137404_10001538 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 15210 | Open in IMG/M |
3300012944|Ga0137410_10320931 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1231 | Open in IMG/M |
3300012944|Ga0137410_10650746 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 875 | Open in IMG/M |
3300012944|Ga0137410_11130982 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 672 | Open in IMG/M |
3300014166|Ga0134079_10032935 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 1747 | Open in IMG/M |
3300015245|Ga0137409_10118116 | All Organisms → cellular organisms → Bacteria | 2446 | Open in IMG/M |
3300015372|Ga0132256_100406341 | Not Available | 1464 | Open in IMG/M |
3300015373|Ga0132257_101578318 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 839 | Open in IMG/M |
3300015374|Ga0132255_101001604 | Not Available | 1253 | Open in IMG/M |
3300017654|Ga0134069_1222126 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 650 | Open in IMG/M |
3300019789|Ga0137408_1103968 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 2199 | Open in IMG/M |
3300021445|Ga0182009_10501364 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 640 | Open in IMG/M |
3300026075|Ga0207708_10879905 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 774 | Open in IMG/M |
3300026075|Ga0207708_11125622 | Not Available | 685 | Open in IMG/M |
3300026118|Ga0207675_101201952 | Not Available | 778 | Open in IMG/M |
3300026297|Ga0209237_1255328 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 538 | Open in IMG/M |
3300026304|Ga0209240_1041090 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1752 | Open in IMG/M |
3300026319|Ga0209647_1237256 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 612 | Open in IMG/M |
3300026320|Ga0209131_1005198 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 8524 | Open in IMG/M |
3300026325|Ga0209152_10439152 | Not Available | 522 | Open in IMG/M |
3300026529|Ga0209806_1322483 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 518 | Open in IMG/M |
3300026530|Ga0209807_1032140 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 2518 | Open in IMG/M |
3300026550|Ga0209474_10569929 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 577 | Open in IMG/M |
3300027748|Ga0209689_1145053 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1154 | Open in IMG/M |
3300027857|Ga0209166_10029436 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 3347 | Open in IMG/M |
3300027903|Ga0209488_10056630 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 2891 | Open in IMG/M |
3300028536|Ga0137415_10094056 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 2851 | Open in IMG/M |
3300028536|Ga0137415_10409485 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 1161 | Open in IMG/M |
3300031731|Ga0307405_10703509 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 837 | Open in IMG/M |
3300031740|Ga0307468_100005317 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 4442 | Open in IMG/M |
3300032005|Ga0307411_10463573 | Not Available | 1063 | Open in IMG/M |
3300032174|Ga0307470_10327473 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 1052 | Open in IMG/M |
3300032180|Ga0307471_100159910 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 2184 | Open in IMG/M |
3300032205|Ga0307472_100053543 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium | 2531 | Open in IMG/M |
3300033412|Ga0310810_10228935 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 2068 | Open in IMG/M |
3300033475|Ga0310811_11443864 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria | 521 | Open in IMG/M |
⦗Top⦘ |
Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 25.00% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 19.64% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 10.71% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 7.14% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 5.36% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 4.46% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 4.46% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 3.57% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 2.68% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 2.68% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.79% |
Surface Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil | 1.79% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.79% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 1.79% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 1.79% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.89% |
Sugarcane Root And Bulk Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil | 0.89% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.89% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.89% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.89% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.89% |
Visualization |
---|
Powered by ApexCharts |
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
3300002906 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm | Environmental | Open in IMG/M |
3300002907 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm | Environmental | Open in IMG/M |
3300002917 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm | Environmental | Open in IMG/M |
3300003267 | Sugarcane bulk soil Sample L1 | Environmental | Open in IMG/M |
3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
3300005174 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 | Environmental | Open in IMG/M |
3300005178 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 | Environmental | Open in IMG/M |
3300005179 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 | Environmental | Open in IMG/M |
3300005181 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 | Environmental | Open in IMG/M |
3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Environmental | Open in IMG/M |
3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Environmental | Open in IMG/M |
3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Environmental | Open in IMG/M |
3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Environmental | Open in IMG/M |
3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
3300005446 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 | Environmental | Open in IMG/M |
3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
3300005537 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 | Environmental | Open in IMG/M |
3300005552 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 | Environmental | Open in IMG/M |
3300005555 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 | Environmental | Open in IMG/M |
3300005556 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 | Environmental | Open in IMG/M |
3300005559 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 | Environmental | Open in IMG/M |
3300005568 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 | Environmental | Open in IMG/M |
3300005569 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 | Environmental | Open in IMG/M |
3300005576 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 | Environmental | Open in IMG/M |
3300005586 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 | Environmental | Open in IMG/M |
3300005587 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 | Environmental | Open in IMG/M |
3300005598 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 | Environmental | Open in IMG/M |
3300006031 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100 | Environmental | Open in IMG/M |
3300006032 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 | Environmental | Open in IMG/M |
3300006046 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101 | Environmental | Open in IMG/M |
3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
3300006794 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 | Environmental | Open in IMG/M |
3300006796 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 | Environmental | Open in IMG/M |
3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
3300006903 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5 | Host-Associated | Open in IMG/M |
3300009012 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159 | Environmental | Open in IMG/M |
3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
3300009143 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 | Environmental | Open in IMG/M |
3300010323 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG | Environmental | Open in IMG/M |
3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
3300010401 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1 | Environmental | Open in IMG/M |
3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
3300012203 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG | Environmental | Open in IMG/M |
3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
3300012285 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG | Environmental | Open in IMG/M |
3300012354 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG | Environmental | Open in IMG/M |
3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
3300012685 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG | Environmental | Open in IMG/M |
3300012918 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG | Environmental | Open in IMG/M |
3300012922 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG | Environmental | Open in IMG/M |
3300012923 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG | Environmental | Open in IMG/M |
3300012925 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012927 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012929 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012944 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300014166 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015 | Environmental | Open in IMG/M |
3300015245 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300017654 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG | Environmental | Open in IMG/M |
3300019789 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
3300021445 | Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG | Environmental | Open in IMG/M |
3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) | Environmental | Open in IMG/M |
3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026297 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes) | Environmental | Open in IMG/M |
3300026304 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes) | Environmental | Open in IMG/M |
3300026319 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes) | Environmental | Open in IMG/M |
3300026320 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes) | Environmental | Open in IMG/M |
3300026325 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes) | Environmental | Open in IMG/M |
3300026529 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes) | Environmental | Open in IMG/M |
3300026530 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes) | Environmental | Open in IMG/M |
3300026550 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes) | Environmental | Open in IMG/M |
3300027748 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes) | Environmental | Open in IMG/M |
3300027857 | Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes) | Environmental | Open in IMG/M |
3300027903 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes) | Environmental | Open in IMG/M |
3300028536 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Host-Associated | Open in IMG/M |
3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Host-Associated | Open in IMG/M |
3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
3300033412 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC | Environmental | Open in IMG/M |
3300033475 | Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC | Environmental | Open in IMG/M |
Geographical Distribution | |
---|---|
Zoom: | Powered by OpenStreetMap |
⦗Top⦘ |
Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI25614J43888_100067446 | 3300002906 | Grasslands Soil | MAIVRRGQLRNHAAMVASVYSRALRKAAELLGGREKLSKVLHIPTADIDKWIADKGKPPREIFLRIVDLILDETGPAXSGNSAGXSSEPPPSRDAAGSSQRYLD* |
JGI25613J43889_1000067710 | 3300002907 | Grasslands Soil | MVASVYSRALRKAAELLGGREKLSKVLHIPTADIDKWIADKGKPPREIFLRIVDLILDETGPAGSGNSAGESSEPPPSRDAAGSSQRYLD* |
JGI25616J43925_100436783 | 3300002917 | Grasslands Soil | MVASVYSRALRKAAELLGGREKLSKVLQIPTADIDTWIADRGKPPREIFLRIVDLILDETGPAGSGNSAGESSEPPPSRDAAGSSQRYLD* |
JGI25616J43925_103084192 | 3300002917 | Grasslands Soil | MAIVRRGQLRNHAAMVASVYSRALRKAAELLGGREKLSKVLHIPTADIDKWIADKGKPPREIFLRIVDLILDETGPAASGNSAGGSSEPPP |
soilL1_100294371 | 3300003267 | Sugarcane Root And Bulk Soil | VRPVHLRNHFSVGASVYSRALQKAAELVGDRDRLAHVLHVPRADIDRWIADLAKPPREIFLRIVDLILDETAPRDGGSHEPPPAREADSSGRYLD* |
Ga0062593_1009457351 | 3300004114 | Soil | MAASVYSRAVQRASELVGGGERLARRLRVPRADIEQWIAGKAKPPREIFLRIVDLILDETAMSSHDPDADTPPSRDAAGADRHFKN* |
Ga0062590_1027034312 | 3300004157 | Soil | MAASVYSRAVQRASELVGGGERLARRLRVPRADIEQWIAGKAKPPREIFLRIVDLILDETAMSSHDPDADTPPSRDAAGADRHFEN* |
Ga0066680_102785503 | 3300005174 | Soil | VRREHFRNDGSVSASVYSRAVRKATELLGGREKLSKVLQVPGAEIDKWIADQAKPPREIFLRIVDLILDETGPSGDAGDAQEAPPSRDAAGASERYLD* |
Ga0066688_108440971 | 3300005178 | Soil | MAASVYSRALRKAADLHGGRDRLSKLLQVPAADIAKWIADQGKPPREIFLRIVDLILDETEPAADAGESQEPPSRDAAGSSQRYLD* |
Ga0066684_109749392 | 3300005179 | Soil | MAASVYSRALRKAADLHGGRDRLSKLLQVPAADIAKWIADQGKPPREIFLRVVDLILDESVSGSDSDPQDPPPPRDAAGSSQRYLD* |
Ga0066678_100273153 | 3300005181 | Soil | MAASVYSRALRKAADLHGGRDRLSKLLQVPAADIAKWIADQGKPPREIFLRIVDLILDETEPAADAGESQEPPSRDAAGSSQHYLD* |
Ga0070680_1009271372 | 3300005336 | Corn Rhizosphere | MAVSVYSRAVQKAMDLIGGRERLARRLRVPKADIEQWIADKAKPPREIFLRIVDLILDETSMSSEGPDADTPPSRDAAGADRLFEN* |
Ga0070691_104192322 | 3300005341 | Corn, Switchgrass And Miscanthus Rhizosphere | AMDLIGGRERLARRLRVPKADIEQWIADKAKPPREIFLRIVDLILDETSMSSEGPDADTPPSRDAAGADRLFEN* |
Ga0070687_1007099061 | 3300005343 | Switchgrass Rhizosphere | AVQKAMDLIGGRERLARRLRVPKADIEQWIADKAKPPREIFLRIVDLILDETSMSSEGPDADTPPSRDAAGADRLFEN* |
Ga0070709_101445661 | 3300005434 | Corn, Switchgrass And Miscanthus Rhizosphere | MSFSVYSRALSRAAELLGGRDKLAKALQVAVTDIEKWIADREKPPREVFLRIVDLILDETAQAGRGEGDPAEPPPSRDAAAPSKR |
Ga0070700_1009893111 | 3300005441 | Corn, Switchgrass And Miscanthus Rhizosphere | MAVSVYSRTVQRATELLGGRDRLARRLRVPKADIDRWIADEAKPPRDIFLRIVDLILDDTGPAHDADADPPPSRDAAGANKHFES* |
Ga0070694_1004589413 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | QSLVVAASVYSRALQRAAQLLGGRDKLSRILQVPRADIDKWIADEAKPPREVFLRIVDLILDESGPGGDVGEKPEPPARDAAGGRGRYLT* |
Ga0066686_102472202 | 3300005446 | Soil | VASVYSRAVQKAAELLGGREKLSRVLQVPGAEIDKWIADQAKPPREVFLRVVDLILDESAPAGDAGDAQEPPPSRDAAGSPQRYLD* |
Ga0070698_1001339653 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | VTPSVYSRALAKAAELVGGRAQLAQVLQVPSAEIDRWIADEAKPPREIFLRIVDIILDETSASGDGDSGEPPRGRDAAGPNRYID* |
Ga0070730_100272415 | 3300005537 | Surface Soil | MAAASVYSRALRKAAELLGGRERLAKALQVPAAEIDKWIADEGKPPRDIFLRIVDLILDESRAGSGSDPQEPPPPRDAAGSSQRYLD* |
Ga0066701_107412473 | 3300005552 | Soil | VGGRDKLSRTSQMPLAEIEKWIAGEAKPPREIFLRIVDLLLDKTSAAGEAGEREPPPSRDAAGASERYLD* |
Ga0066692_108431541 | 3300005555 | Soil | MAASVYSRALQKAAELLGGREKLSKLLQVPGAEIDKWIADQAKPPREIFLRIVDLILDETGPSGDAGDAQEAPPSRDAAGASERYLD* |
Ga0066707_109388362 | 3300005556 | Soil | SPAPPISPRVGRFLSAFFVARVARLAIVRREHLRNDCSVASVYSRALQKAAELVGGREKLSKILRVPAAEIDRWIADQAKPPREIFLRIVDLILDETTAAGEAGDQEPPARDAAGASRYLD* |
Ga0066700_104805992 | 3300005559 | Soil | VASVYSRALQKAAELVGGREKLSKILRVPAAEIDRWIADQAKPPREIFLRIVDLILDETTAAGEAGDQEPPARDAAGASRYLD* |
Ga0066703_109153621 | 3300005568 | Soil | MAASVYSRALQKAAELLGGREKLSKILQVPAAQIDQWIADHAKPPREVFLRIVDLILDQTGASGGDAGDREPSPSR |
Ga0066705_101897403 | 3300005569 | Soil | VRASQLRNHSDMTISVYSRALGRAAELLGGREKLAKVLQVPAADLDAWIADRAKPPRDIFLRVVDLILDETAQAGDGGTTEPPSPRDAAGSSTRYLD* |
Ga0066708_104557332 | 3300005576 | Soil | MAASVYSRALSRAAELLGSREKLAKVLQIPAVEIDKWIADQGKPPREVFLRIVDVILDETRSGSDGDPQEPPPPRDAAGSSQRYLD* |
Ga0066691_102907762 | 3300005586 | Soil | MAASVYSRALQKAAELLGGREKLSKILQVPAAQIDQWIADHAKPPREVFLRIVDLILDQTGASGGDAGDREPSPSRDAAGASSYLD* |
Ga0066654_102283593 | 3300005587 | Soil | PVAESLGDMAAASVYSRALRKAAELLGGRGQLAKVLQVPVAEIDKWIADQGKPPRDIFLRVVDLILDESVSGSDSDPQDPPPPHDAAGSSQRYLD* |
Ga0066706_100408024 | 3300005598 | Soil | VASVYSRALQKAAELVGVREKLSKILRVPAAEIDRWIADQAKPPREIFLRIVDLILDETTAAGEAGDQEPPARDAAGASRYLD* |
Ga0066706_108589382 | 3300005598 | Soil | MAASVYSRALQKAADLHGGRNQLSKLLQVPAADIDRWIADQGKPPREIFLRIVDLILDETGPAPDAGESQEPPSRDAAGSSQRYLD* |
Ga0066651_102558552 | 3300006031 | Soil | MAASVYSRALRKAAELTGGRDKLAKLLHVPAAEIDRWIADEAKPPREIFLRIVDLILDESSSGSDSDSQEPPTPRDAAGPSRHYLD* |
Ga0066651_103466133 | 3300006031 | Soil | SVYSRALGRAAELLGGRDKLAKVLQVPAADLDAWIADRAKPPRDVFLRVVDLILDETAQAGDGGTTEPPASRDAAGSSTRYLD* |
Ga0066696_101556283 | 3300006032 | Soil | MAASVYSRALQKAADLHGGRNQLSKLLQVPAADIDRWIADQGKPPREIFLRIVDLILDETGPAPDAGDSAGESQEPPSRDAAGSSQRYLD* |
Ga0066652_1002112443 | 3300006046 | Soil | MAASVYSRTVQKAVELLGGRDRLAKVLQVPRAELDRWIADEAKPPREMFLRVVDLILDESAPPRGAGDGQDPPPSRSAADGSERYFD* |
Ga0070716_1005314223 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | MSFSVYSRALTRAAQLLGGRDKLAKVLQVSTTELDKWIADRAKPPREVFLRIVDLILDETRQAGDGDAAEPPPSRDAAGPSRYLD* |
Ga0066658_105844432 | 3300006794 | Soil | MAAASVYSRALRKAAELLGGRAQLAKVLQVPVAEIEKWIADQGKPPRDIFLRVVDLILDESVSGSDSDQQDPPPPHDAAGSSQRYLD* |
Ga0066658_108372441 | 3300006794 | Soil | LCARASCGIIERMPASVYSRALSKAAELLGGRERLAKVLQVPAAEIEKWITDQGKPPREVFLRVVDIILDESGPASDEQEPPPPRDAAGSSQRYLD* |
Ga0066665_101006723 | 3300006796 | Soil | MAASVYSRALQKAAELLGGREKLSKLLQVPGAEIDKWIADQAKPPREIFLRIVDLILDETGPSGDAGDAQEAPPSRDAAGASRYLD* |
Ga0075433_102302733 | 3300006852 | Populus Rhizosphere | VRASQLRNHWGMTASVYSRALGRAAELLGGRDKLAQVLQVPVADLESWIADRAKPPRDIFLRVVDLILDETAQSGDGGTTEPPASRDAAGSSTRYLD* |
Ga0075425_1012133212 | 3300006854 | Populus Rhizosphere | VRAGDFRNHWRMTASVYARAVQKAAELVGGRAKLARLLHVPAAEIDHWIAEQAKPPREIFLRVVDLILDESGPAAEGDPPEAPPSRDAAGSSERFLD* |
Ga0075425_1017404722 | 3300006854 | Populus Rhizosphere | VRARQLRNHWRMTASVYSRALRRAAELLGGREKLAKILQVPAVELDKWLAEREKPPRDVFLRVVDLILDETTPAREGDDAQEPPPSRDAAGSSRRYLD* |
Ga0075426_101136294 | 3300006903 | Populus Rhizosphere | MTASVYARAVQKAAELVGGRAKLARLLHVPAAEIDHWIAEQAKPPREIFLRVVDLILDESGPAAEGDPPEAPPSRDAAGSSERFLD* |
Ga0075426_114237211 | 3300006903 | Populus Rhizosphere | AVRSAAIVRARQLRNHWRMTASVYSRALRRAAELLGGREKLAKILQVPAVELDKWLAEREKPPRDVFLRVVDLILDETTPAREGDDAQEPPPSRDAAGSSRRYLD* |
Ga0066710_1001750402 | 3300009012 | Grasslands Soil | VASVYSRALQKAAELVGGREKLSKILRVPAAEIDRWIADQAKPPREIFLRIVDLILDETTATGEAGDQEPPARDAAGASRYLD |
Ga0066710_1038845871 | 3300009012 | Grasslands Soil | VASVYSRAVQKAAELLGGREKLSRVLQVPGAEIDKWIADQAKPPREIFLRIVDLILDETGPSGDAADAPEPPPSRDAAGATRYLA |
Ga0066709_1013963371 | 3300009137 | Grasslands Soil | RGHLRNDGAMAASVYSRALQKAAELLGGREKLSKLLQVPGAEIDKWIADQAKPPREIFLRIVDLILDETGPSGDAGDAQEAPPSRDAAGANRYLD* |
Ga0066709_1026210703 | 3300009137 | Grasslands Soil | SVYSRALQQAADLHGGRNQLSKLLQVPAADIDRWIADQGKPPREIFLRIVDLILDETGPAPDAGDSAGESQEPPSRDAAGSSQRYLD* |
Ga0099792_100407723 | 3300009143 | Vadose Zone Soil | MAIVRRGQLRNHAAMVASVYSRALRKAAELLGGREKLSKVLHIPTADIDMWIADKGKPPREIFLRIVDLILDETGPAGSSNSAGESSEPPPSRDAAGSSQRYLD* |
Ga0134086_101854661 | 3300010323 | Grasslands Soil | ASVYSRAVQKAAELLGGREKLSRVLQVPGAEIDKWIADQAKPPREIFLRIVDLILDETGPSGDAADAPEPPPSRDAAGASRYLD* |
Ga0134128_119771732 | 3300010373 | Terrestrial Soil | LVVAASVYSRALQRAAQLLGGRDKLSRILQVPRADIDKWIADEAKPPREVFLRIVDLILDESGPGGDVGEKPEPPARDAAGGRGRYLT* |
Ga0134128_129212381 | 3300010373 | Terrestrial Soil | RAAELVGGREKLAKVLQVPTAELDKWIADRAKPPREIFLRIVDLILDETANAGRSDDGSAEPPPSRDAAGSPTRYLD* |
Ga0134127_101256981 | 3300010399 | Terrestrial Soil | ADMAVSVYSRAVQKAMDLIGGRERLARRLRVPKADIEQWIADKAKPPREIFLRIVDLILDETSMSSEGPDADTPPSRDAAGADRLFEN* |
Ga0134121_103813272 | 3300010401 | Terrestrial Soil | MAASVYSRALQKAAELCGGRDKLCRVLQLPKADVDRWIADEAKPPRDIFLRVVDLILDETAPSSDAADRDAPPPRDAAGANRRLDD* |
Ga0134121_104968743 | 3300010401 | Terrestrial Soil | MPAASVYSRALSKAAELLGGRDQLARVLQVPAAEIDTWIADEAKPSREVFLRVVDIILDESRSGQDGEPQDPTPPREAAGPSRHYLD* |
Ga0134123_126397612 | 3300010403 | Terrestrial Soil | MAASVYSRAVQKAMDLIGGRERLARRLRVPKADIEQWIADKAKPPREIFLRIVDLILDETAMSSHDPDADTPPSRDAAGADRHFEN* |
Ga0137399_102889713 | 3300012203 | Vadose Zone Soil | VAGSVYSRALQKAAQLLGGRDRLSKILQVPRADIDAWIADNAKPPREIFLRIVDLILDESGPSGEVGDTPEPPSRDAAGSSQRYLD* |
Ga0150985_1066390971 | 3300012212 | Avena Fatua Rhizosphere | MAAASVYSRALKKAAELLGGREQLAKVLQVPAVDIDRWIADQGKPPREVFLRIVDLILDESRSGSSDDSQEPPPPRDAAGSS |
Ga0150985_1126436832 | 3300012212 | Avena Fatua Rhizosphere | MAAASVYSRALKKAAELLGGREQLAKVLQVPAADIERWIADQGKPSREVFLRIVDLILDESRSGSSDPSGGDSPDPQPPHDAAGSSRRYLD* |
Ga0150985_1158259622 | 3300012212 | Avena Fatua Rhizosphere | MSAASVYSRALSKAAELLGGREQLARVLQVPMAEIDKWIADQAKPSREVFLRIVDLILDESQSGADGEPQDPTPPREAAGSSQRYLD* |
Ga0150985_1191008012 | 3300012212 | Avena Fatua Rhizosphere | MAAASVYSRALRKAAELLGGRGQLAKVLQIPVAEIDKWIADQGKPPRDIFLRVVDLILDESVSGSDSEPQDPPPPHDAAGSSQRYLD* |
Ga0150985_1227935873 | 3300012212 | Avena Fatua Rhizosphere | MAAASVYSRALKKAAELLGGREQLAKLLQVPAAEIDRWIADQRKPPREVFLRIVDLILDESRSGSSDDSQEPPPPRDAAGGSRRYLD* |
Ga0137370_104337983 | 3300012285 | Vadose Zone Soil | RNDCAVAASVYSRALQKAAELLGGRDKLSKILHVPRGEIDKWIADQAKPPREIFLRIVDLILDETTAAGEAGDQEPPARDAAGASRYLD* |
Ga0137366_102808862 | 3300012354 | Vadose Zone Soil | VASVYSRAVQKAAELLGGREKLSKMLQVPGAEIDKWIADQAKPPREVFLRVVDLILDETGPSGDAGDAQEARPARDAAGASRYLD* |
Ga0150984_1038478342 | 3300012469 | Avena Fatua Rhizosphere | MTVSVYSRALGRAAELLGGRDKLAKVLQVPPADLDAWIADRAKPPRDIFLRVVDLILDETAQAGDGGTTEPPASRDAAGSSTRYLD* |
Ga0150984_1056902743 | 3300012469 | Avena Fatua Rhizosphere | MAAASVYSRALKKAAELLGGREQLANVLQVPAVDIDRWIADQGKPPREVFLRIVDLILDESRSGSSDDSQEPPPPRDAAGSSRHYLD* |
Ga0150984_1126212142 | 3300012469 | Avena Fatua Rhizosphere | MAAASVYSRALRKAAELLGGRGQLAKVLQIPVAEIDKWIADQGKPPRDIFLRVVDLILDESVSDSDSEPQDPPPPHDAAGSSQRYLD* |
Ga0137397_100322212 | 3300012685 | Vadose Zone Soil | MAASVYSRALQKAAELLGGRDRLSKVLQVPRADIDKWIAEEAKPPREIFLRIVDLILEETGPAGEPGDKSEPPARDAAGSGRRYLD* |
Ga0137396_101815074 | 3300012918 | Vadose Zone Soil | MAASVYSRALQKAAELLGGREKLSKILQVPAAEIDQWIADQAKPPREIFLRSVDLILDATSAAGDAGDSQEPPPPRDAAGASSYLD* |
Ga0137394_103260953 | 3300012922 | Vadose Zone Soil | MAASVYSRALKKAAELLGGREQLAKALQVPSAEIEKWIADQGKPSREVFLRIVDLILDETRSGSDSDSQEPPAPRDAAGPSRRYLD* |
Ga0137394_103849771 | 3300012922 | Vadose Zone Soil | MVASVYSRALSRAAELLGSREKLAKVLQIPAAEIDKWIADEGKPPREVFLRIVDLILDETRSGSDSDPQEPPPPRDAAGSSTRYLD* |
Ga0137394_107741192 | 3300012922 | Vadose Zone Soil | LQKAADLLGGREKLAKALRVPVAEIDKWIADQAKPPRETFLRVVDLILDESAPSGSEAESHDPPPRDCAAGSSSTIEN* |
Ga0137359_106533492 | 3300012923 | Vadose Zone Soil | MAIVRRGQLRNHAAMVASVYSRALRKAAELLGGRERLSKVLQIPTADIDQWIADKGKPPREIFLRIVDLILDETGPAGSGNSAGESQEPPPSRDAAGSSQRYLD* |
Ga0137419_100757014 | 3300012925 | Vadose Zone Soil | VAASVYSRALQKAAQLLGGRDRLSKILQVSRADIDAWIADNAKPPREIFLRIVDLILDESGPSGEVGDTPEPPSRDAAGSSQRYLD* |
Ga0137419_106717832 | 3300012925 | Vadose Zone Soil | MAASVYSRALQKAAELLGGREKLSKILQVPAAEIDQWIADQAKPPREVFLRIVDLILDQTGASGGDAGDREPSPPRDAAGASSYLD* |
Ga0137416_105233242 | 3300012927 | Vadose Zone Soil | VAASVYSRALQKAAQLLGGRDRLSKILQVPRADIDAWIADNAKPPREIFLRIVDLILDESGPSGEVGDTPEPPSRDAAGSSQRYLD* |
Ga0137404_100015389 | 3300012929 | Vadose Zone Soil | MVASVYSRALSRAAELLGSREKLAKVLQIPAVEIDKWIADQGKPPREIFLRIVDLILDETRSGSDSDPQEPPPPRDAAGSSQRYLD* |
Ga0137410_103209313 | 3300012944 | Vadose Zone Soil | MAASVYSRALQKAAELLGGRDRLSKVLQVPRADIDKWIAEEAKPPREIFLRIVDLILEETGPAGEPGDKSEPPARDAAGSGQRYLD* |
Ga0137410_106507463 | 3300012944 | Vadose Zone Soil | VRREQLRNDCAVAASVYSRALQKAAELLGGREKLSKILQVPAAEIDQWIADQAKPPREIFLRIVDLILDATSAAGDAGDSQEPPPPRDAAGASSYLD* |
Ga0137410_111309821 | 3300012944 | Vadose Zone Soil | LLGGRDRLSEILQVPRADIDAWIADNAKPPREIFLRIVDLILDESGPSGEVGDTPEPPSRDAAGSSQRYLD* |
Ga0134079_100329352 | 3300014166 | Grasslands Soil | MAASVYSRALRKAAELTGGRDKLAKLLQVPATEIDRWIADEAKPPREIFLRIVDLILDESSSGSDSDSQEPPTPREAAGASRHYLD* |
Ga0137409_101181163 | 3300015245 | Vadose Zone Soil | VAASVYSRALQKAAELLGGREKLSKILQVPAAEIDQWIADQAKPPREIFLRIVDLILDATSAAGDAGDSQEPPPPRDAAGASSYLD* |
Ga0132256_1004063411 | 3300015372 | Arabidopsis Rhizosphere | LVVAASVYSRASQKAAQLVGGREKLAKVLQVPRAEIDRWIADEAKPPREVFLRIVDLILDEGAPATDTDEKPEPPARDAAGGRGRYLT* |
Ga0132257_1015783182 | 3300015373 | Arabidopsis Rhizosphere | MAASVYSRALQKAAQLAGGHEKLAKVLQVPRAEIDRWIADEAKPPREVFLRIVDLILDEGAPATDTDEKPEPPARDAAGGRGRYLT* |
Ga0132255_1010016043 | 3300015374 | Arabidopsis Rhizosphere | MAASVYSRALQKAAQLAGGHEKLAKVLQVPRAEIDRWIADEAKPPREVFLRIVDLILDEGAPATDTDEKPEPPARDAAGGLGRYLT* |
Ga0134069_12221261 | 3300017654 | Grasslands Soil | VTSVYSRAVQKAAELLGGREKLSKVLQVPGAEIDKWIADQAKPPREVFLRVVDLILDETGPSGDAGDAQEAPPSRDAAGASERYLD |
Ga0137408_11039685 | 3300019789 | Vadose Zone Soil | MVASVYSRALSRAAELLGSREKLAKVLQIPAVEIDKWIADQGKPPREIFLRIVDLILDETRSGSDSDPQEPPPPRDAAG |
Ga0182009_105013642 | 3300021445 | Soil | VRGCQLRNDWHMSFSVYSRALNRAAELVGGREKLAKVLQVPTAELDKWIADRAKPPREIFLRIVDLILDETANAGRSDDGTAEPPPSRGAAGSPTRYLD |
Ga0207708_108799052 | 3300026075 | Corn, Switchgrass And Miscanthus Rhizosphere | MAVSVYSRTVQRATELLGGRDRLARRLRVPKADIDRWIADEAKPPRDIFLRIVDLILDDTGPAHDADADPPPSRDAAGANKHFES |
Ga0207708_111256222 | 3300026075 | Corn, Switchgrass And Miscanthus Rhizosphere | MAASVYSRAVQRASELVGGGERLARRLRVPRADIEQWIAGKAKPPREIFLRIVDLILDETAMSSHDPDADTPPSRDAAGADRHFEN |
Ga0207675_1012019521 | 3300026118 | Switchgrass Rhizosphere | ALQRAAQLLGGRDKLSRILQVPRADIDKWIADEAKPPREVFLRIVDLILDESGPGGDVGEKPEPPARDAAGGRGRYLT |
Ga0209237_12553281 | 3300026297 | Grasslands Soil | REVRVHQLGPRRAFPVGRFAIVRREHFRNDGSVSASVYSRAVRKATELLGGREKLSKVLQVPGAEIDKWIADQAKPPREIFLRIVDLILDETGPSGDAGDAQEAPPSRDAAGASERYLD |
Ga0209240_10410902 | 3300026304 | Grasslands Soil | MAIVRRGQLRNHAAMVASVYSRALRKAAELLGGREKLSKVLHIPTADIDKWIADKGKPPREIFLRIVDLILDETGPAGSGNSAGESSEPPPSRDAAGSSQRYLD |
Ga0209647_12372562 | 3300026319 | Grasslands Soil | MAAASVYSRALKKAAELLGGREQLAKALQVPSAEIDRWIADQGKPSREVFLRIVDLILDETRSGSDSDSQEPPAPRDAAGPSRHYLD |
Ga0209131_10051982 | 3300026320 | Grasslands Soil | MVASVYSRALRKAAELLGGREKLSKVLHIPTADIDKWIADKGKPPREIFLRIVDLILDETGPAGSGNSAGESSEPPPSRDAAGSSQRYLD |
Ga0209152_104391522 | 3300026325 | Soil | LCARASCGIIERMPASVYSRALSKAAELLGGRERLAKVLQVPAAEIEKWITDQGKPPREVFLRVVDIILDESGPASDEQEPPPPRDAAGSSQRYLD |
Ga0209806_13224832 | 3300026529 | Soil | MAASVYSRALQKAAELLGGREKLSKILQVPAAQIDQWIADHAKPPREVFLRIVDLILDQTGASGGDAGDREPSPSRDAA |
Ga0209807_10321403 | 3300026530 | Soil | MAASVYSRALQKAADLHGGRNQLSKLLQVPAADIDRWIADQGKPPREIFLRIVDLILDETGPAPDAGDSAGESQEPPSRDAAGSSQRYLD |
Ga0209474_105699291 | 3300026550 | Soil | MAASVYSRALQKAADLHGGRNQLSKLLQVPAADIDRWIADQGKPPREIFLRIVDLILDETGPAPDAGESQEPPSRDAAGSSQRYLD |
Ga0209689_11450533 | 3300027748 | Soil | VASVYSRALQKAAELVGGREKLSKILRVPAAEIDRWIADQAKPPREIFLRIVDLILDETTAAGEAGDQEPPARDAAGASRYLD |
Ga0209166_100294365 | 3300027857 | Surface Soil | MAAASVYSRALRKAAELLGGRERLAKALQVPAAEIDKWIADEGKPPRDIFLRIVDLILDESRAGSGSDPQEPPPPRDAAGSSQRYLD |
Ga0209488_100566303 | 3300027903 | Vadose Zone Soil | MVASVYSRALRKAAELLGGREKLSKVLHIPTADIDKWIADKGKPPREIFLRIVDLILDETGPAGSSNSAGESSEPPPSRDAAGSSQRYLD |
Ga0137415_100940565 | 3300028536 | Vadose Zone Soil | MAASVYSRALQKAAELLGGREKLSKILQVPAAEIDQWIADQAKPPREVFLRIVDLILDQTGASGGDAGDREPSPSRDAAGASSYLD |
Ga0137415_104094853 | 3300028536 | Vadose Zone Soil | VAASVYSRALQKAAQLLGGRDRLSKILQVPRADIDAWIADNAKPPREIFLRIVDLILDESGPSGEVGDTPEPPSRDAAGSSQRYLD |
Ga0307405_107035092 | 3300031731 | Rhizosphere | VRALSLRNDAGVTPSVYSRALVKAAELVGGRAQLAQVLQVPPAEIDKWIADEAKPPREIFLRIVDIILDETAASGDGDSGEPPPGRDAAGPTRYID |
Ga0307468_1000053173 | 3300031740 | Hardwood Forest Soil | MAASVYSRALRKAAELLGGRDKLAKILQVPRDDIDKWIADEAKPPREVFLRIVDLILDEGGPAGETGDSPEPPARDAAGRQRYLD |
Ga0307411_104635731 | 3300032005 | Rhizosphere | VRALSLRNDAGVTPSVYSRALIKAAELVGGRAQLAQVLQVPPAEIDKWIADEAKPPREIFLRIVDIILDETAASGDGDSGEPPPGRDAAGPTRYID |
Ga0307470_103274733 | 3300032174 | Hardwood Forest Soil | MATASVYSRALKKAAELLGGREQLAKVLQVRAAQIDDWIADQGKPSREVFLRIVDLILDESRSGSDSDSQEPPPPRDAAGSSRHYLD |
Ga0307471_1001599103 | 3300032180 | Hardwood Forest Soil | MAASVYSRALRKATELLGGRDKLAKILQVPRDDIDKWIADEAKPPREVFLRIVDLILDEGGPAGETGDSPEPPARDAAGRQRYLD |
Ga0307472_1000535432 | 3300032205 | Hardwood Forest Soil | LKAAELLGGRDKLAKALRVPRAELDKWIADQGKPPRDTFLRLVDLILDEIGAGGSSTDAHEPPPPRDAAGASSRTPD |
Ga0310810_102289353 | 3300033412 | Soil | VRASQLRNHWDMTVSVYSRALRRAAELLGGREKLVKLLQIPAADLDSWIADRILDETTQSGDGGTTEPPASRDAAGSSTRYLD |
Ga0310811_114438641 | 3300033475 | Soil | SRFAVGRGAIVRSCRFWNDGRMSFSVYSRALTRAAQLLGGRDKLAKVLQVSTTELDKWIADRAKPPREVFLRIVDLILDETRQAGDGDAAEPPPSRDAAGPSRYLD |
⦗Top⦘ |