Metagenome / Metatranscriptome Family F084622

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084622
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	87 residues
Representative Sequence	MDVDDRMRVAKEAGYVLLSQDDGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPAQLQDWML
Number of Associated Samples	79
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.07 %
% of genes near scaffold ends (potentially truncated)	37.50 %
% of genes from short scaffolds (< 2000 bps)	89.29 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (79.464 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.214 % of family members)
Environment Ontology (ENVO)	Unclassified (55.357 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (68.750 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.59% β-sheet: 24.14% Coil/Unstructured: 48.28%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00037	Fer4	2.68
PF13411	MerR_1	1.79
PF07885	Ion_trans_2	1.79
PF06253	MTTB	0.89
PF01638	HxlR	0.89
PF02037	SAP	0.89
PF09722	Xre_MbcA_ParS_C	0.89
PF09587	PGA_cap	0.89
PF13834	DUF4193	0.89
PF04879	Molybdop_Fe4S4	0.89
PF03734	YkuD	0.89
PF00156	Pribosyltran	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.89
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.89
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.89
COG5598	Trimethylamine:corrinoid methyltransferase	Coenzyme transport and metabolism [H]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.46 %
All Organisms	root	All Organisms	20.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.46 %
cellular organisms	root	All Organisms → cellular organisms	19.64 %
Viruses	superkingdom	All Organisms → Viruses	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.46 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	19.64 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.46 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	16.07 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.46 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	16.07 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.89 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.46 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.61 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.89 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.46 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.79 %
Nakamurellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales	1.79 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.89 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.89 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.89 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.46 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.79 %
Nakamurellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae	1.79 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.89 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.89 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.89 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.46 %
Nakamurella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	1.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.79 %
Catellatospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora	0.89 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.89 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.89 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.46 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.79 %
Catellatospora methionotrophica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora → Catellatospora methionotrophica	0.89 %
Nakamurella multipartita	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita	0.89 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.89 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.89 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.46 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.79 %
Nakamurella multipartita DSM 44233	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	0.89 %
Catellatospora methionotrophica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora → Catellatospora methionotrophica	0.89 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.89 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.89 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005093\|Ga0062594_101701413	Not Available	659	Open in IMG/M
3300005169\|Ga0066810_10200846	Not Available	501	Open in IMG/M
3300005327\|Ga0070658_10811260	Not Available	813	Open in IMG/M
3300005331\|Ga0070670_101259146	Not Available	677	Open in IMG/M
3300005334\|Ga0068869_100047351	Not Available	3105	Open in IMG/M
3300005337\|Ga0070682_100004652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7626	Open in IMG/M
3300005347\|Ga0070668_101452105	Not Available	626	Open in IMG/M
3300005353\|Ga0070669_101869620	Not Available	524	Open in IMG/M
3300005356\|Ga0070674_100356785	Not Available	1182	Open in IMG/M
3300005364\|Ga0070673_101509871	Not Available	634	Open in IMG/M
3300005364\|Ga0070673_102167064	Not Available	528	Open in IMG/M
3300005365\|Ga0070688_101783186	Not Available	505	Open in IMG/M
3300005436\|Ga0070713_101096906	Not Available	769	Open in IMG/M
3300005441\|Ga0070700_100255232	Not Available	1260	Open in IMG/M
3300005455\|Ga0070663_100010849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5692	Open in IMG/M
3300005455\|Ga0070663_100049680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella → Nakamurella multipartita → Nakamurella multipartita DSM 44233	2980	Open in IMG/M
3300005456\|Ga0070678_100271053	Not Available	1431	Open in IMG/M
3300005459\|Ga0068867_100554628	Not Available	996	Open in IMG/M
3300005466\|Ga0070685_10911304	Not Available	655	Open in IMG/M
3300005466\|Ga0070685_11208244	Not Available	575	Open in IMG/M
3300005539\|Ga0068853_101393279	Not Available	678	Open in IMG/M
3300005615\|Ga0070702_100684693	Not Available	779	Open in IMG/M
3300005618\|Ga0068864_102198841	Not Available	558	Open in IMG/M
3300005841\|Ga0068863_101663748	Not Available	648	Open in IMG/M
3300005841\|Ga0068863_102143720	Not Available	569	Open in IMG/M
3300006028\|Ga0070717_10209107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1712	Open in IMG/M
3300006028\|Ga0070717_10269844	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300006173\|Ga0070716_100723067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Nakamurellales → Nakamurellaceae → Nakamurella	763	Open in IMG/M
3300006574\|Ga0074056_10700639	Not Available	807	Open in IMG/M
3300006755\|Ga0079222_11309095	Not Available	661	Open in IMG/M
3300009098\|Ga0105245_11014361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	875	Open in IMG/M
3300009098\|Ga0105245_11288764	Not Available	779	Open in IMG/M
3300009101\|Ga0105247_11698523	Not Available	522	Open in IMG/M
3300009148\|Ga0105243_10846075	Not Available	905	Open in IMG/M
3300009148\|Ga0105243_11351530	Not Available	731	Open in IMG/M
3300009176\|Ga0105242_12269392	Not Available	589	Open in IMG/M
3300009176\|Ga0105242_13287376	Not Available	502	Open in IMG/M
3300009177\|Ga0105248_10384352	Not Available	1581	Open in IMG/M
3300009177\|Ga0105248_13018635	Not Available	536	Open in IMG/M
3300009553\|Ga0105249_12470640	Not Available	592	Open in IMG/M
3300010373\|Ga0134128_11780237	Not Available	678	Open in IMG/M
3300010375\|Ga0105239_11548353	Not Available	766	Open in IMG/M
3300010397\|Ga0134124_12711443	Not Available	539	Open in IMG/M
3300010403\|Ga0134123_12421812	Not Available	590	Open in IMG/M
3300011119\|Ga0105246_10386598	Not Available	1158	Open in IMG/M
3300012951\|Ga0164300_10468090	Not Available	712	Open in IMG/M
3300012951\|Ga0164300_10740368	Not Available	601	Open in IMG/M
3300012957\|Ga0164303_10378703	Not Available	866	Open in IMG/M
3300012957\|Ga0164303_10703074	Not Available	681	Open in IMG/M
3300012958\|Ga0164299_11391973	Not Available	541	Open in IMG/M
3300012958\|Ga0164299_11705490	Not Available	500	Open in IMG/M
3300012960\|Ga0164301_10995643	Not Available	658	Open in IMG/M
3300012961\|Ga0164302_10284387	Not Available	1070	Open in IMG/M
3300012961\|Ga0164302_10776092	Not Available	720	Open in IMG/M
3300012961\|Ga0164302_11637522	Not Available	537	Open in IMG/M
3300012961\|Ga0164302_11872829	Not Available	509	Open in IMG/M
3300012985\|Ga0164308_10020969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3809	Open in IMG/M
3300012985\|Ga0164308_10766449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora → Catellatospora methionotrophica	838	Open in IMG/M
3300012986\|Ga0164304_10277261	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300012986\|Ga0164304_10653909	Not Available	792	Open in IMG/M
3300012987\|Ga0164307_10050701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2379	Open in IMG/M
3300012987\|Ga0164307_10057116	Not Available	2271	Open in IMG/M
3300012987\|Ga0164307_11695615	Not Available	535	Open in IMG/M
3300012988\|Ga0164306_10190490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1432	Open in IMG/M
3300012988\|Ga0164306_10783298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	766	Open in IMG/M
3300012988\|Ga0164306_11722556	Not Available	544	Open in IMG/M
3300013296\|Ga0157374_10438327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1307	Open in IMG/M
3300013296\|Ga0157374_10820240	Not Available	946	Open in IMG/M
3300013296\|Ga0157374_12445844	Not Available	550	Open in IMG/M
3300013297\|Ga0157378_11325854	Not Available	761	Open in IMG/M
3300013306\|Ga0163162_11944503	Not Available	673	Open in IMG/M
3300013306\|Ga0163162_11965969	Not Available	670	Open in IMG/M
3300013307\|Ga0157372_10755387	Not Available	1131	Open in IMG/M
3300013307\|Ga0157372_12123462	Not Available	645	Open in IMG/M
3300013308\|Ga0157375_12289606	Not Available	644	Open in IMG/M
3300013308\|Ga0157375_12897175	Not Available	573	Open in IMG/M
3300013308\|Ga0157375_13309011	Not Available	537	Open in IMG/M
3300014325\|Ga0163163_10040639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4542	Open in IMG/M
3300014969\|Ga0157376_11225759	Not Available	779	Open in IMG/M
3300014969\|Ga0157376_11359620	Not Available	741	Open in IMG/M
3300014969\|Ga0157376_12989491	Not Available	512	Open in IMG/M
3300015371\|Ga0132258_13899879	Not Available	1014	Open in IMG/M
3300018083\|Ga0184628_10383452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300018432\|Ga0190275_10170620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2028	Open in IMG/M
3300018432\|Ga0190275_10237529	Not Available	1750	Open in IMG/M
3300018432\|Ga0190275_11573031	Not Available	735	Open in IMG/M
3300018476\|Ga0190274_13191121	Not Available	552	Open in IMG/M
3300018920\|Ga0190273_10019510	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3011	Open in IMG/M
3300025899\|Ga0207642_10333534	Not Available	889	Open in IMG/M
3300025914\|Ga0207671_11548196	Not Available	511	Open in IMG/M
3300025925\|Ga0207650_10674318	Not Available	872	Open in IMG/M
3300025925\|Ga0207650_10830685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	783	Open in IMG/M
3300025927\|Ga0207687_11628399	Not Available	554	Open in IMG/M
3300025931\|Ga0207644_11128488	Not Available	659	Open in IMG/M
3300025939\|Ga0207665_10793227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	748	Open in IMG/M
3300025940\|Ga0207691_10216039	Not Available	1664	Open in IMG/M
3300025942\|Ga0207689_10641377	Not Available	895	Open in IMG/M
3300025960\|Ga0207651_10960975	Not Available	762	Open in IMG/M
3300025972\|Ga0207668_12084579	Not Available	511	Open in IMG/M
3300026023\|Ga0207677_11926109	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300026035\|Ga0207703_11336481	Not Available	689	Open in IMG/M
3300026067\|Ga0207678_10031351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4637	Open in IMG/M
3300026067\|Ga0207678_11304033	Not Available	642	Open in IMG/M
3300026095\|Ga0207676_12142006	Not Available	557	Open in IMG/M
3300026142\|Ga0207698_12046311	Not Available	587	Open in IMG/M
3300028597\|Ga0247820_10098156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1774	Open in IMG/M
3300030002\|Ga0311350_11176180	Not Available	684	Open in IMG/M
3300030114\|Ga0311333_10713878	Not Available	837	Open in IMG/M
3300030294\|Ga0311349_11104163	Not Available	742	Open in IMG/M
3300031232\|Ga0302323_102000797	Not Available	658	Open in IMG/M
3300031918\|Ga0311367_11482796	Not Available	666	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	54.46%
Environmental	Environmental	45.54%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	54.46%
Terrestrial	Environmental → Terrestrial	44.64%
Aquatic	Environmental → Aquatic	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	40.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	38.39%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.18%
Peat	Environmental → Terrestrial → Peat	4.46%
Sediment	Environmental → Aquatic → Sediment	0.89%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	23.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	15.18%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.39%
Loam	Environmental → Terrestrial → Soil → Loam	9.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	23.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	15.18%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.82%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.21%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	8.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	8.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	7.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.36%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.57%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062594_1017014131	3300005093	Soil	MNINDRLRAAKEAGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLELRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML*
Ga0066810_102008461	3300005169	Soil	TPRFMYVDDRIRAAKQAGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML*
Ga0070658_108112602	3300005327	Corn Rhizosphere	MYVDDRIRAAKQAGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML*
Ga0070670_1012591461	3300005331	Switchgrass Rhizosphere	MTIDDRMRAAKETGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLELRDFNLDPVGHQHLGDARLHPVVAFEALMELDPAQLQDWML*
Ga0068869_1000473515	3300005334	Miscanthus Rhizosphere	MYVDDRIRAAKQAGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLELRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML*
Ga0070682_10000465210	3300005337	Corn Rhizosphere	MTIDDRMRAAKETGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLELRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML*
Ga0070668_1014521052	3300005347	Switchgrass Rhizosphere	MDIDDRIRVAKKAGYVLLSEDDGREIYGRDDLPSTVEFDGTEWTLHLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPAQLQDWML*
Ga0070669_1018696201	3300005353	Switchgrass Rhizosphere	TPITWWTLRFMDMGDRMRVAKEAGYVLLSEDDGQEIYGRDDLPSTVEFDGNEWTLELRDFNLDPVGHQHLGDARLHPIVASKR*
Ga0070674_1003567852	3300005356	Miscanthus Rhizosphere	MDVDDRTRVAKEAGYVLLSHDDGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPAQLRDWML*
Ga0070673_1015098711	3300005364	Switchgrass Rhizosphere	MTIDDRMRAAKETGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLELRDFNLDPVGHQHLGDARLHPVVAFEALMELDTTQLQDWML*
Ga0070673_1021670641	3300005364	Switchgrass Rhizosphere	MDIDERMRVARKAGYVLLSQDDGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPAQLRDWML
Ga0070688_1017831861	3300005365	Switchgrass Rhizosphere	MDVDDRTRVAKEAGYVLLSQDDGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPAVAFEALMELDPAQLQDWML*
Ga0070713_1010969062	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTIDDRMRAAKETGYLLLSKDDRQEIYGRDNLPSTVEFDGNEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML*
Ga0070700_1002552321	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	RPWTPRFMYVDDRIRAAKQAGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML*
Ga0070663_1000108491	3300005455	Corn Rhizosphere	TGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLELRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML*
Ga0070663_1000496805	3300005455	Corn Rhizosphere	MYVDDRIRAAKQAGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDP
Ga0070678_1002710533	3300005456	Miscanthus Rhizosphere	MTIDDRMRAAKETGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLELRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQD
Ga0068867_1005546281	3300005459	Miscanthus Rhizosphere	MDVDDRVRAAKEAGYVLLSQDNGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPAQLRDWML*
Ga0070685_109113041	3300005466	Switchgrass Rhizosphere	MDIGDRMRVAKEAGYVLLSEDDGQEIYGRDDLPSTVEFDGIEWTLHLRDFNLDPAGHQHLGDARLHPMVAFEALMELDPAQLKDWML*
Ga0070685_112082441	3300005466	Switchgrass Rhizosphere	AWACSTSSDRFRTLSLMDVDDRMRVAKEAGYVLLSQDDGQEIYGRDDLPSTLEFDGVEWTLQLRDFNLDPVGHQHLGDARLNPIVAFEALMELDPAQLQDWML*
Ga0068853_1013932792	3300005539	Corn Rhizosphere	MNVDDRMRAAREAGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML*
Ga0070702_1006846931	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MNVDDRIRVAKEAGYVLLSQDDGQEIYGRDDLPSTVEFDGIEWTLHLRDFNLDPLGHQHLGDARLHPMVAFEALMKLDPAQLKDWML*
Ga0068864_1021988411	3300005618	Switchgrass Rhizosphere	MDVDDRTRVAKEAGYVLLSHDDGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPAVAFEALMELDPAQLRDWML*
Ga0068863_1016637481	3300005841	Switchgrass Rhizosphere	MYVDDRIRAAKQAGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWM
Ga0068863_1021437201	3300005841	Switchgrass Rhizosphere	MDVDDRTRVAKEAGYVLLSQDDGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPAVAFEALMELDPAQLR
Ga0070717_102091071	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MNINDRLRAAKEAGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML*
Ga0070717_102698443	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDIGDRMRVAKEAGYVLLSEDDGQEIYGRDDLPSTLEFDGIEWTLHLRDFNLDPAGHQHLGDARLHPMVAFEALMELDPAQLKDWML*
Ga0070716_1007230672	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	FMDVDDRARVAKEAGFVLLSLDDGQEIYGRDDLPSTVEFDGTEWTLHLRDFNLDPVGHQHLGDARLHPMVAFEALMELDPAQLQDWML*
Ga0074056_107006392	3300006574	Soil	KYRRPWTPRFMYVDDRIRAAKQAGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML*
Ga0079222_113090952	3300006755	Agricultural Soil	MNINDRLRAAKEAGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLQLRDFNLDPVGHQHLGDARLHPDAAFEALMELDPAQLKDWML*
Ga0105245_110143611	3300009098	Miscanthus Rhizosphere	PRDCASGSALLDNYRSLRTLDLMNVDDRIRVAKEAGYVLLSQDDGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPAQLQDWML*
Ga0105245_112887642	3300009098	Miscanthus Rhizosphere	MDIDDRIRVAKKAGYVLLSEDDGREIYGRDDLPSTVEFDGIEWTLHLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPAQLQDWML*
Ga0105247_116985231	3300009101	Switchgrass Rhizosphere	MTIDDRMRAAKETGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLELRDFNLDPVGHQHLGDARLHPVVAFEALMELDPAQLQDGML*
Ga0105243_108460751	3300009148	Miscanthus Rhizosphere	RWLARQAPIAAGTDFMDVDDRTRVAKEAGYVLLSHDDGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPAQLRDWML*
Ga0105243_113515301	3300009148	Miscanthus Rhizosphere	TLNLMDIDDRIRVAKKAGYVLLSEDDGREIYGRDDLPSTVEFDGTEWTLHLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPAQLQDWML*
Ga0105242_122693921	3300009176	Miscanthus Rhizosphere	MDVDDRTRVAKEAGYVLLSQDDGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPAVAFEALMELDPAQLQNWML*
Ga0105242_132873761	3300009176	Miscanthus Rhizosphere	MDMGDRMRVAKEAGYVLLSEDDGQEIYGRDDLPSTVEFDGIEWTLHLRDFNLDPAGHQHLGDARLQPMVAFEALMELDPAQLKDWL*
Ga0105248_103843522	3300009177	Switchgrass Rhizosphere	MTIDDRMRAAKETGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML*
Ga0105248_130186351	3300009177	Switchgrass Rhizosphere	VAKEAGYVLLSQDDGQEIYGRNDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPARLRDWML*
Ga0105249_124706401	3300009553	Switchgrass Rhizosphere	SALLDNYRSLRTLDLMNVDDRIRVAKEAGYVLLSQDDGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPAQLQDWML*
Ga0134128_117802371	3300010373	Terrestrial Soil	MYVDDRIRAAKQAGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLQLPDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML*
Ga0105239_115483531	3300010375	Corn Rhizosphere	MDVDDRTRVAKEAGYVLLSHDDGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPARLRDWML*
Ga0134124_127114431	3300010397	Terrestrial Soil	WARRAVHLNFAAAGAPQLDKYRSLRTLRFMDVDDRMRPAKEAGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML*
Ga0134123_124218122	3300010403	Terrestrial Soil	MRTLNLMDVDDRMRVAKEAGYVLLSQDDGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPIVAFEALMELDPAQLQEWML*
Ga0105246_103865982	3300011119	Miscanthus Rhizosphere	MDMGDRMRVAKEAGYVLLSEDDGQEIYGRDDLPSTVEFDGIEWTLHLRDFNLDPAGHQHLGDARMQPMVAFEALVELDPAQLKDWML*
Ga0164300_104680902	3300012951	Soil	MRTLNLMDVDDRMRVAKEAGYVLLSQDDGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPAVAFEALMELDPAQLQDWML*
Ga0164300_107403681	3300012951	Soil	MTIDDRMRAAKETGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLELRDFNLDPVGHQHLGDARLHPVVAFEA
Ga0164303_103787032	3300012957	Soil	MDVNDRTQAAKMAGYILLSEDDGREIYGRDDLPSTVEFDGVEWTLHLRDFNLDPVGHQHLGDARLHPAVAF
Ga0164303_107030742	3300012957	Soil	MNINDRMRAAKQAGYLLLLQDDGQEIYGRDDLPSTVEFDGTEWTLHLRDFHLDPVGHQHLGDARLNPAVALEALMELDPNQLQDWMV*
Ga0164299_113919732	3300012958	Soil	MDVDNRIRVAKEAGYVLLAQDDGQEIYGRDDLPSTVEFDGVEWTLHLRDFNLDPVGHQHLGDARLHPAVAFEALMELDPAQLKDWML*
Ga0164299_117054901	3300012958	Soil	MDVDDRVRVAKEAGYVLLSQDDGQEIYGRDDLPSTLEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPIVAFEALMELDPAQLQDWML*
Ga0164301_109956431	3300012960	Soil	MDVDNRIRVAKEAGYVLLAQDDGQEIYGRDDLPSTVEFDGVEWTLHLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPAQLKDWML*
Ga0164302_102843871	3300012961	Soil	MDVDDRVRVAKEAGYVLLSQDDGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPIVAFEALM
Ga0164302_107760922	3300012961	Soil	MDVDDRTRVAKEAGYVLLSQDDGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPAQLRDWML*
Ga0164302_116375222	3300012961	Soil	MTIDDRMRAAKETGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLELRDFNLDPVGHQHLGDARLHPVVAFEALMELD
Ga0164302_118728291	3300012961	Soil	MNVDDRIRVAKEAGYVLLSQDDGQEIYGRDDLPSTVEFDGIEWTLQLRDFNLEPVGHQHLGDTRLHPVVAFEALMELDPAQLQDWML*
Ga0164308_100209695	3300012985	Soil	MDVNDRTQAAKMAGYILLSEDDGREIYGRDDLPSTVEFDGVEWTLHLRDFNLDPVGHQHLGDARLHPAVAFEALMELDPQQLQDWMV*
Ga0164308_107664492	3300012985	Soil	MDVDNRIRVAKEAGYVLLAQDDGQEIYGRDDLPSTVEFDGVEWTLHLRDFNLDPVGHQHLGDARLHPAVAFEALMELDPAQLEDWML*
Ga0164304_102772612	3300012986	Soil	MDVDNRIRVAKEAGYVLLAQDDGQEIYGRDDLPSTVEFDGVEWTLHLRDFNLDPVGHQHLGDARLHPMVAFEALMELDPTQLQDWML*
Ga0164304_106539091	3300012986	Soil	VAKEAGYVLLSHDDGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPAQLRDWML*
Ga0164307_100507014	3300012987	Soil	EAGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLELRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML*
Ga0164307_100571161	3300012987	Soil	MDVDDRARVAKEAGFVLLSLDDGQEIYGRDDLPSTVEFDGTEWTLHLRDFNLDPVGHQHLGDARLHPMVAFEALMELDPTQLQDWML*
Ga0164307_116956152	3300012987	Soil	LGLLDKFRSFRTLSLMDVDDRVRAAKEAGYVLLSQDNGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPIVAFEALMELDPAQLKDWML*
Ga0164306_101904901	3300012988	Soil	VNDRTQAAKMAGYILLSEDDGREIYGRDDLPSTVEFDGVEWTLHLRDFNLDPVGHQHLGDARLHPAVAFEALMELDPQQLQDWMV*
Ga0164306_107832982	3300012988	Soil	MDVDNRIRVAKEAGYVLLAQDDGQEIYGRDDLPSTVEFDGVEWTLHLRDFNLDPVGRQHLGDARLHPVVAFAALTELDSAQ
Ga0164306_117225561	3300012988	Soil	MDVNDRTQVANVAGYVLLSEDDGQEIYGRDDLPNTVEFDGTEWTLHLRDFHLDPVGHQHLGDARLNPAVAFEALMELDPNRLQDWMI*
Ga0157374_104383271	3300013296	Miscanthus Rhizosphere	DLKGGGRFHPPYGPGSRRSGSELPDKYRRPWTPRFMYVDDRIRAAKQAGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML*
Ga0157374_108202401	3300013296	Miscanthus Rhizosphere	MDVDDRARVARESGFVLLSLDDGQEIYGRDDLPSTVEFDGTEWTLHLRDFHLDPVGHQHLGDARLNPAVALEALMELDPNQLQDWMV*
Ga0157374_124458441	3300013296	Miscanthus Rhizosphere	VAKEAGYVLLSQDDGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPAQLQDWML*
Ga0157378_113258542	3300013297	Miscanthus Rhizosphere	MNVDDRIRVAKEAGYVLLSQDDGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPIVAFEALMELDPAQLQDWML*
Ga0163162_119445032	3300013306	Switchgrass Rhizosphere	GYLLLSEDDGQEIYGRDDLPSTGAFDGIEWTLHLRDFTLDPVGHQHLGDARLHPMVAFEALMELDPAQLKDWML*
Ga0163162_119659691	3300013306	Switchgrass Rhizosphere	MNVDDRMRAAREAGYLLLSQDDGQEIYGRDDLPSTVEFNGNEWTLQLRDFNLGPVGHQHLGDARLHPVVAFAALMELDPAQIEDWML*
Ga0157372_107553872	3300013307	Corn Rhizosphere	MEVYDRVRVAKEAGYVLLSQDDGQEIYGRDDLPSTLEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPIVAFEALMELDPAQLQDWML*
Ga0157372_121234622	3300013307	Corn Rhizosphere	MYVDDRIRAAKQAGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQD
Ga0157375_122896061	3300013308	Miscanthus Rhizosphere	MNVYGRMRVAKEAGYLFLSQDDGQEIYGRDDLPSTVEFDGIEWTLHLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPAQLQDWML*
Ga0157375_128971752	3300013308	Miscanthus Rhizosphere	LLLSQDDGQEIYGRDDLPSTVEFDGNEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML*
Ga0157375_133090112	3300013308	Miscanthus Rhizosphere	MNVDDRIRVAKEAGYVLLSQDDGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPAQLQDWML*
Ga0163163_100406395	3300014325	Switchgrass Rhizosphere	LSEDDGQEIYGRDDLPSTLEFDGIEWTLHLRDFNLDPAGHQHLGDARLHPMVAFEALMELDPAQLKDWML*
Ga0157376_112257591	3300014969	Miscanthus Rhizosphere	MDVNDRTRVANVAGYVLLSDDDGQEIYGRDDLPSTVEFDGTEWTLHLRDFHLDPVGHQHLGDARLNPAVALEALMELDP
Ga0157376_113596201	3300014969	Miscanthus Rhizosphere	VAKEAGYVLLSQDDGQEIYGRDDLPSTVEFDGVEWTLQLRVFNLDPVGHQHLGDARLHPAVAFEALMELDPTQLQDWML*
Ga0157376_129894911	3300014969	Miscanthus Rhizosphere	RVAKKAGYVLLSEDDGREIYGRDDLPSTVEFDGTEWTLHLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML*
Ga0132258_138998792	3300015371	Arabidopsis Rhizosphere	MDIDDRIRVAKKAGYVLLSEDDGQEIYGRDDLPSTVEFDGIEWTLHLRVFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML*
Ga0184628_103834522	3300018083	Groundwater Sediment	MDVDDRKQVAEEAGYVLLSEDDGQEIYGRDDLPSTVEFDGTEWTLHLRDFNLDPVGHQHLGDARLNPAIAFEALMELDPAQLKDWMI
Ga0190275_101706203	3300018432	Soil	MMDVDYRVRVAKEAGFVLLSQDDGREIYGRDDLPSTVEFDGGEWTLHLRDFNLDPVGHQHLGEAQLHPAVAFETLMELDPAQLRDWMI
Ga0190275_102375291	3300018432	Soil	MDVDDRMRVAKEAGYVLLSQDDGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPAQLQDWML
Ga0190275_115730312	3300018432	Soil	MDAEGRSQVAKVAGYALLSQDDGQEIYGRDDLPSTVGFDGTEWTLHLRDFNLDPVGHQHLGDARLHPAAAFEALMELDPAQLDDWML
Ga0190274_131911211	3300018476	Soil	IMDINDRMREANEAGYGLLAKDDNQEIYGRGDLPCTLEFDGAEWTLHLRDFDFNPQGHQYLGDASLDPAHVFTALKTLDPNQLQDWML
Ga0190273_100195102	3300018920	Soil	MDINDRMREANEAGYGLLAKDDNQEIYGRGDLPCTLEFDGAEWTLHLRDFDFNPQGHQYLGNALLDPGHAFMALKTLDPNQLQDWML
Ga0207642_103335341	3300025899	Miscanthus Rhizosphere	MDVDDRTRVAKEAGYVLLSHDDGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPAQLRDWML
Ga0207671_115481962	3300025914	Corn Rhizosphere	RPWTPRFMYVDDRIRAAKQAGYLLLSQDDGQEIYGRDDLPSTVEFDGIEWTLHLRDFNLDPAGHQHLGDARLHPVVAFEALMELDPTQLQDWML
Ga0207650_106743181	3300025925	Switchgrass Rhizosphere	MDIGDRMRVAKEAGYVLLSEDDGQEIYGRDDLPSTLEFDGIEWTLHLRDFNLDPAGHQHLGDARLHPMVAFEALMELDPAQLKDWML
Ga0207650_108306851	3300025925	Switchgrass Rhizosphere	MTIDDRMRAAKETGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLELRDFNLDPVGHQHLGDARLHPVVAFEALMELDTTQLQDWML
Ga0207687_116283991	3300025927	Miscanthus Rhizosphere	IDDRMRAAKETGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML
Ga0207644_111284881	3300025931	Switchgrass Rhizosphere	MYVDDRIRAAKQAGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLELRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML
Ga0207665_107932271	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	SFMDVDDRARVAKEAGFVLLSLDDGQEIYGRDDLPSTVEFDGTEWTLHLRDFNLDPVGHQHLGDARLHPMVAFEALMELDPAQLQDWML
Ga0207691_102160392	3300025940	Miscanthus Rhizosphere	MYVDDRIRAAKQAGYLLLSQDDGQEIYGRDDLPSTVEFDGIECTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML
Ga0207689_106413771	3300025942	Miscanthus Rhizosphere	MDVDDRTRVAKEAGYVLLSHDDGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPAVAFEALMELDPAQLRDWML
Ga0207651_109609752	3300025960	Switchgrass Rhizosphere	MYVDDRIRAAKQAGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMEL
Ga0207668_120845791	3300025972	Switchgrass Rhizosphere	MGVPAGSGLLDKHRSFRTLNLMDIDDRIRVAKKAGYVLLSEDDGREIYGRDDLPSTVEFDGIEWTLHLRDFNLDPVGHQHLGDARLHPVVA
Ga0207677_119261091	3300026023	Miscanthus Rhizosphere	MDVDDRTPVAKEAGFVLLSLDDGQEIYGRDDLPSTVEFDGTEWTLHLRDFNLDPVGHQHLGDARPHPMVAFEALMELDPAQLEDWML
Ga0207703_113364811	3300026035	Switchgrass Rhizosphere	MDVDDRTRVAKEAGYVLLSQDDGQEIYGRDDLPSTVEFDGVEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPAQLRDWM
Ga0207678_100313511	3300026067	Corn Rhizosphere	MYVDDRIRAAKQAGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLQLRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQ
Ga0207678_113040331	3300026067	Corn Rhizosphere	MTIDDRMRAAKETGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLELRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQ
Ga0207648_113449341	3300026089	Miscanthus Rhizosphere	MTIDDRMRAAKETGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLELRDFNLDPVGHQHLGDARLHPVVAF
Ga0207676_121420061	3300026095	Switchgrass Rhizosphere	TIDDRMRAAKETGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLELRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML
Ga0207698_120463111	3300026142	Corn Rhizosphere	MSDPGGCADPAGSGLLDKHRSFWTLNLMDIDDRIRVAKKAGFVLLSEDDGQEIYGRDDLPSTVEFDGIEWTLHLRDFNLDPVGHQHLGDAGLHPVDAFEALMELDPAQLQDWML
Ga0247820_100981562	3300028597	Soil	MTIDDRMRAAKETGYLLLSQDDGQEIYGRDDLPSTVEFDGNEWTLELRDFNLDPVGHQHLGDARLHPVVAFEALMELDPTQLQDWML
Ga0311350_111761801	3300030002	Fen	MDVDDRKQVAEEAGYDLLSEDDGQEIYGRDDLPSTVEFDGTEWTLHLRDFNLDPVGHQHLGDARLNPAIAFEALMELDPAQLKDWMI
Ga0311333_107138782	3300030114	Fen	MDVDDRKQVAEEAGYVLLSEDDGQEIYGRDDLPSTVEFDGTEWTLHLRDFNLDPVGHQHLGDARVNPAIAFEALMELDPAQLKDWMI
Ga0311349_111041632	3300030294	Fen	MNVDDRKQVAKEAGYVLLSEDDGQEIYGRDDLPSTVEFDGIEWTLHLRDFNLDPVGHQHLGDSGLHPAIAFEALMELDPAQLKDWML
Ga0302323_1020007971	3300031232	Fen	MDVDDRKQVAEEAGYVLLSEDDGQEIYGRDDLPSTVEFDGTEWTLHLRDFNLDPVGHQHLGHARLNPAIAFEALMELDPAQLKDWMI
Ga0311367_114827961	3300031918	Fen	MNADDRKQVAKEAGYVLLSEDDGQEIYGRDDLPSTVEFDGIEWTLHLRDFNLDPVGHQHLGDSGLHPAIAFEALMELDPAQLKDWML

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084622

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences