NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F084603

Metagenome / Metatranscriptome Family F084603

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F084603
Family Type Metagenome / Metatranscriptome
Number of Sequences 112
Average Sequence Length 81 residues
Representative Sequence PVSAGDDRRWTEISGVVESLVGRTLILRSEEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR
Number of Associated Samples 92
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 0.00 %
% of genes from short scaffolds (< 2000 bps) 0.00 %
Associated GOLD sequencing projects 87
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (100.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(22.321 % of family members)
Environment Ontology (ENVO) Unclassified
(42.857 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(62.500 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.
1JGI1027J12803_1045830761
2Ga0066677_102060222
3Ga0066677_103881821
4Ga0066683_107891162
5Ga0066673_102946053
6Ga0066685_100654804
7Ga0066388_1014674193
8Ga0066388_1028636132
9Ga0066686_110484492
10Ga0066682_105666152
11Ga0066687_102224901
12Ga0070699_1003842283
13Ga0070697_1004467433
14Ga0070696_1001451613
15Ga0066701_106223482
16Ga0066661_106498922
17Ga0066703_104585463
18Ga0066905_1008832163
19Ga0075417_100107226
20Ga0070716_1013264972
21Ga0079222_116474381
22Ga0066653_101537961
23Ga0066665_103070364
24Ga0066665_109603831
25Ga0066660_111228923
26Ga0079220_107672432
27Ga0075428_1010906871
28Ga0075428_1011245023
29Ga0075421_1002187114
30Ga0075430_1013638853
31Ga0075431_1017638111
32Ga0075426_113108962
33Ga0075419_100628101
34Ga0099794_102725352
35Ga0075418_105260261
36Ga0075418_109403291
37Ga0075418_114000261
38Ga0066709_1025667333
39Ga0126374_103177482
40Ga0126374_109740271
41Ga0126384_100166997
42Ga0126384_115999282
43Ga0126382_103569452
44Ga0127457_10607502
45Ga0127494_10404591
46Ga0127455_11012062
47Ga0127459_10649901
48Ga0126321_11906831
49Ga0134109_101263192
50Ga0134067_101516182
51Ga0134064_100434001
52Ga0134065_102943802
53Ga0134080_105430291
54Ga0134071_101641412
55Ga0134071_102696862
56Ga0134062_101517032
57Ga0126370_113055141
58Ga0126376_106697811
59Ga0134124_126744461
60Ga0126383_103219162
61Ga0137364_111113591
62Ga0137363_114134431
63Ga0137399_104343072
64Ga0137399_111014973
65Ga0137376_109427972
66Ga0137370_105133052
67Ga0134057_11357051
68Ga0134061_13643042
69Ga0134055_10944631
70Ga0137358_100758542
71Ga0137358_103599631
72Ga0137397_103586023
73Ga0137396_108793271
74Ga0137394_102303294
75Ga0137419_101607392
76Ga0137419_104924723
77Ga0137419_109473212
78Ga0137416_112873901
79Ga0137404_108806092
80Ga0137410_113734072
81Ga0137410_116653273
82Ga0134076_106394201
83Ga0134087_104463942
84Ga0134081_101898831
85Ga0134075_100722611
86Ga0134074_10302501
87Ga0066655_103188533
88Ga0066662_123308472
89Ga0137408_14849654
90Ga0179585_11684251
91Ga0209027_12646272
92Ga0209055_12440511
93Ga0209055_12741752
94Ga0209686_10933351
95Ga0209686_11939001
96Ga0209155_10949273
97Ga0209471_10998711
98Ga0209471_13095872
99Ga0209472_10075068
100Ga0209472_10546701
101Ga0209470_10645152
102Ga0209473_10406662
103Ga0209808_10235041
104Ga0209808_11841981
105Ga0209805_12284952
106Ga0179587_103374951
107Ga0209689_12269881
108Ga0209814_100139745
109Ga0209814_101731541
110Ga0209382_122007782
111Ga0310813_104114631
112Ga0307473_110070702
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 3.90%    β-sheet: 40.26%    Coil/Unstructured: 55.84%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070PVSAGDDRRWTEISGVVESLVGRTLILRSEEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGRSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy


Visualization
Unclassified
100.0%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Soil
Soil
Vadose Zone Soil
Terrestrial Soil
Tropical Forest Soil
Grasslands Soil
Agricultural Soil
Soil
Grasslands Soil
Hardwood Forest Soil
Soil
Tropical Forest Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Populus Rhizosphere
19.6%7.1%17.9%22.3%3.6%5.4%3.6%12.5%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10458307613300000955SoilTASKSVTPDVTPASAPMPSLARDDRRWTEIIGVVEAVSGRTLVLRTTEGRVAVDMSNLSSNLERLVTPGSTVRVYGLPIEVRFKAMGFVDSGARP*
Ga0066677_1020602223300005171SoilVEAIAAPATLPVSAGDDRRWTEISGVVESLVGRTLILRSDEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR*
Ga0066677_1038818213300005171SoilVEAIAAPATLPVSAGDDRRWTEISGVVESLVGRTLILRSEEGRVAVDISSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR*
Ga0066683_1078911623300005172SoilVTTPAAVPASSTDERRWTEISGVVESLVGRTLILRSDEGRVAVDLSSLSQNIDRAITPGAHVRVYGVPVEIRFKAMGFFDPGTRP*
Ga0066673_1029460533300005175SoilTALPASASDDRRWTEVSGVVESIVGRTLVLRAPEGRVAVDVSSLSQNFDRMVTPGSTVSVYGVPVEMRFKAMGFFDPGPRP*
Ga0066685_1006548043300005180SoilVSPPPARRSTVEVTTPAAVPASSTDERRWTEISGVVESLVGRTLILRSDEGRVAVDLSSLSQNLDRTITPGAHIRVYGMPVEIRFKAMGFFDPGTRP*
Ga0066388_10146741933300005332Tropical Forest SoilMPSLARDDRRWTEITGVVEAVSGRTLVLRTTEGRVAVDMSNLSSNLERLVMPGSTVRVYGLPIEVRFKAMGFVDSGARP*
Ga0066388_10286361323300005332Tropical Forest SoilMPSLARDDRRWTEITGVVEAVSGRTLVLRSSEGRVAVDMSSLSSNVDRIAPGSTVRVYGLPIEVRFKAMGFVESGSRP*
Ga0066686_1104844923300005446SoilVEAIAAPATLPVSAGDDRRWTEISGVVESLVGRTLILRSEEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVE
Ga0066682_1056661523300005450SoilVEAIAAPATLPVSAGDDRRWTEISGVVESLVGRTLILRSEEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR*
Ga0066687_1022249013300005454SoilEVSGVVESLVGRTLILRSDEGRIAVDLSALSQNIDRAITPGAHVRVYGVPVEVRFKAMGFFDPGTRP*
Ga0070699_10038422833300005518Corn, Switchgrass And Miscanthus RhizosphereVEAIAAPATLPVSAGDDRRWSEISGVVESLVGRTLILRSAEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR*
Ga0070697_10044674333300005536Corn, Switchgrass And Miscanthus RhizosphereGRTLVLRSTEGRIAVDMSNLSSNLERILTPGATVRVYGLPVEVRFKAMGFVSQ*
Ga0070696_10014516133300005546Corn, Switchgrass And Miscanthus RhizosphereMPSIARDDRRWTEVTGVVEAINGRTLVLRSAEGRVAVDMSSLSSNLERILTPGATVRVYGLPVEVRFKAMGFVSP*
Ga0066701_1062234823300005552SoilAPPTPPVRPTAVTAPSVKKPVVEAIAAPAAMPASAADDRRWTEISGVVESLVGRTLVLRSDEGRVAVDVSSLGPSLDRMVTPGSTVRVYGVPVEMRFKAMGFFDAGTRP*
Ga0066661_1064989223300005554SoilVEAIAAPATLPVSAGDDRRWTEISGIVESLVGRTLVIRSEEGRVAVDVSSLSPSLERMVMPGTMVRVYGVPVEMRFKAMGFFDPGGR*
Ga0066703_1045854633300005568SoilARSAAVAAPMAARRPVVEAIAAPATLPVSAGDDRRWTEISGIVESLVGRTLVIRSEEGRVAVDVSSLSPSLERMVMPGTMVRVYGVPVEMRFKAMGFFDPGGR*
Ga0066905_10088321633300005713Tropical Forest SoilVPVSVSDDRRWTEVTGVVESPIGRTLVLRTPEGQVAVDVSNLSSSIDRIVTLGSTIRVYGVPVEMRFKAMGFLD
Ga0075417_1001072263300006049Populus RhizosphereLLLRSTEGRVAVDVSSLSPSLERYLTPGATVRVYGVPVELRFKAMGFFDSRDTRP*
Ga0070716_10132649723300006173Corn, Switchgrass And Miscanthus RhizosphereMPSLARDDRRWTEVTGVVEAINGRTLVLRSTEGRIAVDMSNLSSNLERILTPGATVRVYGLPIEVRFKAMGFVSQ*
Ga0079222_1164743813300006755Agricultural SoilMEISGVVESLSGRTLVIRSDEGRVAVDVSSLSVNLERIITPGSMVRVYGLPVELRFKAM
Ga0066653_1015379613300006791SoilRRWTEISGVVESLVGRTLILRSGEGRVAVDLSSLSQNLDRAITPGAHVRVYGVPVEIRFKAMGFFDPGTRP*
Ga0066665_1030703643300006796SoilPVSAGDDRRWTEISGVVESLVGRTLILRSEEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR*
Ga0066665_1096038313300006796SoilAAVSPPPARRSTVEVTTPAAVPASSTDERRWTEISGVVESLVGRTLILRSDEGRVAVDLSSLSQNLDRAITPGAHVRVYGVPVEIRFKAMGFFHPGTRP*
Ga0066660_1112289233300006800SoilRTLILRSEEGRVAVDISSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR*
Ga0079220_1076724323300006806Agricultural SoilMEISGVVESLSGRTLVIRSDEGRVAVDVSSLSVNLERIITPGSMVRVYGLPVELRFKAMGVVDPGHGR*
Ga0075428_10109068713300006844Populus RhizosphereVAPASAPMPSLARDDRRWTEVTGIVEAVSGRTLVLRTTEGRVAVDMSNLSSNLERLVIPGSTVRVYGLPIEVRFKAMGFVDSGARP*
Ga0075428_10112450233300006844Populus RhizospherePTAAPAVAATPPPPKAAVTEVAPASAPVSPVARDERRWTEITGVVESISGRTLVLRAPEGRVAVDMSSLSSNLKRIVTPGATVRVYGLPIELRFKAMGFFDPGGRP*
Ga0075421_10021871143300006845Populus RhizosphereVEAVSGRTLVLRTTEGRVAVDMSNLSSNLERLVIPGSTVRVYGLPIEVRFKAMGFVDSGARP*
Ga0075430_10136388533300006846Populus RhizosphereTLLLRSTEGRVAVDVSSLSPSLERYLTPGATVRVYGVPVELRFKAMGFFDSRDTRP*
Ga0075431_10176381113300006847Populus RhizosphereMPSLARDDRRWTEITGVVEAVSGRTLVLRTTEGRVAVDMSNLSSNLERLVIPGSTVRVYGLPIEVRFKAMGFVDSGARP*
Ga0075426_1131089623300006903Populus RhizosphereMPSLARDDRRWTEITGVVEAVNGRTLVLRTTEGRVAVDMSNLSSNLERLVMPGSTVRVYGLPIEVRFKAMGFVDSGTRP*
Ga0075419_1006281013300006969Populus RhizosphereLARDDRRWTEITGVVEAVSGRTLVLRSSEGRVAVDMSSLSSNIDRIITPGSTVRVYGLPIEVRFKAMGFVESGARP*
Ga0099794_1027253523300007265Vadose Zone SoilTEISGVVESLVGRTLVLRSDEGRVAVDVSSLSQSLDRMVTPGSTVRVYGVPVEVRFKAMGVFDPGSRP*
Ga0075418_1052602613300009100Populus RhizosphereKQATPEIAPAAAPMPSLARDDRRWTEITGVVEAVSGRTLVLRSSEGRVAVDMSSLSSNIDRIITPGSTVRVYGLPIEVRFKAMGFVESGARP*
Ga0075418_1094032913300009100Populus RhizosphereAPVPTSATEDRRWTEITGVVESLVGRTLLLRSTEGRVAVDVSSLSPSLERYLTPGATVRVYGVPVELRFKAMGFFDSRDTRP*
Ga0075418_1140002613300009100Populus RhizosphereAPVSPVARDERRWTEITGVVESISGRTLVLRAPEGRVAVDMSSLSSNLERIVTPGATVRVYGLPIELRFKAMGFFDPGGRP*
Ga0066709_10256673333300009137Grasslands SoilAVSPPPARRSTVEVTTPAAVPASSTDERRWTEISGVVESLVGRTLILRSDEGRVAVDLSSLSQNLDRTITPGAHVRVYGMPVEIRFKAMGFFDPGTRP*
Ga0126374_1031774823300009792Tropical Forest SoilMPSLARDDRRWTEITGVVEAVSGRTLVLRTTEGRVAVDMSNLSSNLERLVTTGSTVRVYGLPIEVRFKAMGFVDSGTRAP*
Ga0126374_1097402713300009792Tropical Forest SoilGRTIVLRSSEGRVAVDISSLSSTVDRIVTPGSTVRVYGLPIEVRFKAMGFVESGARP*
Ga0126384_1001669973300010046Tropical Forest SoilVPVSVSDDRRWIEVTGVVESPIGRTLVLRTPEGQVAVDVSNLSSSIDRIVTLGSTIRVYGVPVEMRFKAMGFLDLGARP*
Ga0126384_1159992823300010046Tropical Forest SoilPMPSLARDDRRWTEITGVVEAVSGRTLVLRTTEGRVAVDMSNLSSNLERLVMPGSTVRVYGLPIEVRFKAMGFVDSGARP*
Ga0126382_1035694523300010047Tropical Forest SoilMPSLARDDRRWTEITGVVEAVSGRTLVLRTTEGRVAVDMSSLSSNIDRIVTPGSTVRVYGLPIEVRFKAMGFVDSGARP*
Ga0127457_106075023300010081Grasslands SoilVESLVGRTLVLRSEEGRIAVDVSSLSQNLERMVTPGSTVRVYGVPIEVRFKAMGFFDPGTRP*
Ga0127494_104045913300010107Grasslands SoilGVVESLVGRTLVLRSEEGRIAVDVSSLSQNLERMVTPGSTVRVYGVPIEVRFKAMGFFDPGTRP*
Ga0127455_110120623300010132Grasslands SoilPAAMPASASDERRWTEISGVVESLVGRTLVLRSEEGRIAVDVSSLSQNLERMVTPGSTVRVYGVPIEVRFKAMGFFDPGTRP*
Ga0127459_106499013300010133Grasslands SoilPASASDERRWTEISGVVESLVGRTLVLRSEEGRIAVDVSSLSQNLERMVTPGSTVRVYGVPIEVRFKAMGFFDPGTRP*
Ga0126321_119068313300010145SoilPPPPARRSTVEVTTPAAVPASTNDDRRWTEVSGVVESLVGRTLILRSDEGRIAVDLSALSQNIDRAITPGAHVRVYGVPVEVRFKAMGFFDPGTRP*
Ga0134109_1012631923300010320Grasslands SoilVPASSTDERRWTEISGVVESLVGRTLILRSDEGRVAVDLSSLSQNIDRAITPGAHVRVYGVPVEIRFKAMGFFDPGTRP*
Ga0134067_1015161823300010321Grasslands SoilVSPPPARRSTVEVTTPAAVPASSTDERRWTEISGVVESLVGRTLILRSDEGRVAVDLSSLSQNLDRTITPGAHVRVYGMPVEIRFKAMGFFDPGTRP*
Ga0134064_1004340013300010325Grasslands SoilARRSTVEMTTPAAVPASSTDERRWTEISGVVESLVGRTLILRSDEGRVAVDLSSLSQNLDRTITPGAHVRVYGMPVEIRFKAMGFFDPGTRP*
Ga0134065_1029438023300010326Grasslands SoilTVEVTTPAAVPASSTDERRWTEISGVVESLVGRTLILRSDEGRVAVDLSSLSQNIDRAITPGAHVRVYGVPVEIRFKAMGFFDPGTRP*
Ga0134080_1054302913300010333Grasslands SoilPAAVPASSTDERRWTEISGVVESLVGRTLILRSDEGRVAVDLSSLSQNLDRAITPGAHVRVYGVPVEIRFKAMGFFDPGTRP*
Ga0134071_1016414123300010336Grasslands SoilMQASASDERRWTEISGVVESLVGRTLVLRSEEGRIAVDVSSLSQNLERMVTPGSTVRVYGVPIEVRFKAMGFFDPGTRP*
Ga0134071_1026968623300010336Grasslands SoilVSPPPARRSTVEVTTPAAVPASSTDERRWTEISGVVESLVGRTLILRSDEGRVAVDLSSLSQNLDRAITPGAHVRVYGVPVEIRFKAMGFFDPGTRP*
Ga0134062_1015170323300010337Grasslands SoilVSPPPARRSTVEVTTPAAVPASSTDERRWTEISGVVESLVGRTLILRSDEGRVAVDLSSLSQNIDRAITPGAHVRVYGVPVEIRFKAMGFFDPGTRP*
Ga0126370_1130551413300010358Tropical Forest SoilSAPMPSLARDDRRWTEITGVVEAVSGRTLVLRTTEGRVAVDMSNLSSNLERLVMPGSTVRVYGLPIEVRFKAMGFVDSGARP*
Ga0126376_1066978113300010359Tropical Forest SoilAATGPASTQSKPATAEVAQTSLQMPHLARDDLRWKEITGVVEAVNGRTLVLRTPDGRVAADMSNRSSNLERIVTIGSTVRVYGLPIEVRFKAMGFVDAGTRP*
Ga0134124_1267444613300010397Terrestrial SoilAPMPSIARDDRRWTEVTGVVEAINGRTLVLRSAEGRVAVDMSSLSSNLERILTPGATVRVYGLPVEVRFKAMGFVSP*
Ga0126383_1032191623300010398Tropical Forest SoilVPVSVSDDRRWTEVTGVVESPIGRTLVLRTPEGQVAVDVSNLSSSIDRIVTLGSTIRVYGVPVEMRFKAMGFLDLGARP*
Ga0137364_1111135913300012198Vadose Zone SoilTEVSGVVESLVGRTLVLRSTEGRVAVDVSSLSQNLDRMITPGATVRVYGIPVEMRFKAMGFFDPGTRP*
Ga0137363_1141344313300012202Vadose Zone SoilAVAAPMAARRPVVEAIAAPATLPVSAGDDRRWTEISGVVESLVGRTLILRSEEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR*
Ga0137399_1043430723300012203Vadose Zone SoilGAAVTASSVRKPVVEAIAAPAAMPTSVADDRRWTEISGVVESLVGRTLVLRSDEGRVAVDVSSLSPSLDRMVTPGSTVRVYGIPVEMRFKAMGFFDPGARP*
Ga0137399_1110149733300012203Vadose Zone SoilSAGDDRRWTEISGIVESLVGRTLVLRSEEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR*
Ga0137376_1094279723300012208Vadose Zone SoilMAARRPVVEAIAAPATLPVSAGDDRRWTEISGVVESLVGRTLILRSEEGRVAVDVSSLSPSLERMVAPGTMVRVYGVPVEMRFKAMGFFDPGGR*
Ga0137370_1051330523300012285Vadose Zone SoilVVTSPTPAALSVSASDERRWTEVSGVVESLVGRTLVLRSTEGRVAVDVSSLSQNLDRMITPGATVRVYGIPVEMRFKAMGFFDPGTRP*
Ga0134057_113570513300012396Grasslands SoilVETAPAPAAMPASASDERRWTEISGVVESLVGRTLVLRSEEGRIAVDVSSLSQNLERMVTPGSTVRVYGVPIEVRFKAMGFFDPGTRP*
Ga0134061_136430423300012399Grasslands SoilLVGRTLVLRSEEGRIAVDVSSLSQNLERMVTPGSTVRVYGVPIEVRFKAMGFFDPGTRP*
Ga0134055_109446313300012401Grasslands SoilPAPMPASASDERRWTEISGVVESLVGRTLVLRSEEGRIAVDVSSLSQNLERMVTPGSTVRVYGVPIEVRFKAMGFFDPGTRP*
Ga0137358_1007585423300012582Vadose Zone SoilMAARRPVVEAIAAPATLPVSAGDDRRWTEISGVVESLVGRTLILRSEEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR*
Ga0137358_1035996313300012582Vadose Zone SoilISGIVESLVGRTLVLRSEEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR*
Ga0137397_1035860233300012685Vadose Zone SoilVGRTLVLRSEEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR*
Ga0137396_1087932713300012918Vadose Zone SoilRRWTEISGVVESLVGRTLILRSEEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR*
Ga0137394_1023032943300012922Vadose Zone SoilWTEISGIVESLVGRTLVLRSEEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR*
Ga0137419_1016073923300012925Vadose Zone SoilMAAKRPVVEAIAAPATLPVSAGDDRRWTEISGVVESLVGRTLILRSEEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR*
Ga0137419_1049247233300012925Vadose Zone SoilAGDDRRWTEISGIVESLVGRTLVLRSEEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR*
Ga0137419_1094732123300012925Vadose Zone SoilRSDEGRVAVDVSSLGPSLDRMVTPGSTVRVYGIPVEMRFKAMGFFDPGARP*
Ga0137416_1128739013300012927Vadose Zone SoilGDDRRWTEISGIVESLVGRTLVLRSEEGRVAVDVSSLSPSLERMVMPGTMVRVYGVPVEMRFKAMGFFDPGGR*
Ga0137404_1088060923300012929Vadose Zone SoilMPASASDERRWTEISGVVESLVGRTLVLRSEEGRIAVDVSSLSQNLERMVTPGSTVRVYGVPIEVRFKAMGFFDPGTRP*
Ga0137410_1137340723300012944Vadose Zone SoilMPTSVADDRRWTEISGVVESLVGRTLVLRSDEGRVAVDVSSLSPSLDRMVTPGSMVKVYGVPVEMRFKAMGFFDPGTRP*
Ga0137410_1166532733300012944Vadose Zone SoilLRSEEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR*
Ga0134076_1063942013300012976Grasslands SoilVGGAPLIISTPTPSPVRSAAVSPPPARRSTVEVTTPAAVPASSTDERRWTEISGVVESLVGRTLILRSDEGRVAVDLSSLSQNLDRAITPGAHVRVYGVPVEIRFKAMGFFDPGTRP*
Ga0134087_1044639423300012977Grasslands SoilMAARRPVVEAIAAPATLPVSAGDDRRWTEISGVVESLVGRTLILRSDEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR*
Ga0134081_1018988313300014150Grasslands SoilPATLPVSAGDDRRWTEISGVVESLVGRTLILRSDEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR*
Ga0134075_1007226113300014154Grasslands SoilTVEVTTPAAVPASSTDERRWTEISGVVESLVGRTLILRSDEGRVAVDLSSLSQNLDRAITPGAHVRVYGVPVEIRFKAMGFFDPGTRP*
Ga0134074_103025013300017657Grasslands SoilERRWTEISGVVESLVGRTLILRSDEGRVAVDLSSLSQNIDRAITPGAHVRVYGVPVEIRFKAMGFFDPGTRP
Ga0066655_1031885333300018431Grasslands SoilLPVSAGDDRRWTEISGVVESLVGRTLILRSEEGRVAVDISSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR
Ga0066662_1233084723300018468Grasslands SoilPASSTDERRWTEISGVVESLVGRTLILRSDEGRVAVDLSSLSQNLDRTITPGAHVRVYGMPVEIRFKAMGFFDPGTRP
Ga0137408_148496543300019789Vadose Zone SoilVRKPVAEAIAAPAAMPTSVADDRRWTEISGVVESLVGRTLVLRSDEGHVTVDVSSLSPSLDRMVTPGSMVKVYGVPVEMRFKALPSQARITQITVAMHGQTE
Ga0179585_116842513300021307Vadose Zone SoilLAAKRPVVEAIAAPATLRVSAGDDRRWTEISGIVESLVGRTLVLRSEEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR
Ga0209027_126462723300026300Grasslands SoilVGRTLILRSEEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR
Ga0209055_124405113300026309SoilVEAIAAPATLPVSAGDDRRWTEISGVVESLVGRTLILRSDEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRF
Ga0209055_127417523300026309SoilAPMAARRPVVEAITAPATLPVSAGDDRRWTEISGVVESLVGRTLILRSEEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR
Ga0209686_109333513300026315SoilTLILRSDEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR
Ga0209686_119390013300026315SoilVESLVGRTLVLRSTEGRVAVDVSSLSQNLDRMITPGATVRVYGIPVEMRFKAMGFFDPGTRP
Ga0209155_109492733300026316SoilSLVGRTLILRSEEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR
Ga0209471_109987113300026318SoilAVAAPMAARRPVVEAIAAPATLPVSAGDDRRWTEISGIVESLVGRTLVIRSEEGRVAVDVSSLSPSLERMVMPGTMVRVYGVPVEMRFKAMGFFDPGGR
Ga0209471_130958723300026318SoilVEAIAAPATLPVSAGDDRRWTEISGIVESLVGRTLVLRSEEGRVAVDVSSLSPSLERMVMPGTMVRVYGVPVEMRFKAMGFFDPGG
Ga0209472_100750683300026323SoilVGGAPLIISTPTPSPVRSAAVSPPPARRSTVEVTTPAAVPASSTDERRWTEISGVVESLVGRTLILRSDEGRVAVDLSSLSQNIDRAITPGAHVRVYGVPVEIRFKAMGFFDPGTRP
Ga0209472_105467013300026323SoilDDRRWTEISGVVESLVGRTLILRSDEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR
Ga0209470_106451523300026324SoilVLRSEEGRIAVDVSSLSQNLERMVTPGSTVRVYGVPIEVRFKAMGFFDPGTRP
Ga0209473_104066623300026330SoilVEAIAAPATLPVSAGDDRRWTEISGVVESLVGRTLILRSDEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR
Ga0209808_102350413300026523SoilAGDDRRWTEISGVVESLVGRTLILRSEEGRVAVDVSSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR
Ga0209808_118419813300026523SoilSLVGRTLILRSDEGRVAVDLSSLSQNLDRTITPGAHVRVYGVPVEIRFKAMGFFDPGTRP
Ga0209805_122849523300026542SoilVEAIAAPATLPVSAGDDRRWTEISGVVESLVGRTLILRSEEGRVAVDISSLSPSLERMVTPGTMVRVYGVPVEMRFKAMGFFDPGGR
Ga0179587_1033749513300026557Vadose Zone SoilPATLPVSVGDDRRWTEISGVVESLAGRMLILRSEEGRVAVDVSSLSPSLERMVMPGTMVRVYGVPVEMRFKAMGFFDPGGR
Ga0209689_122698813300027748SoilVGRTLVIRSEEGRVAVDVSSLSPSLERMVMPGTMVRVYGVPVEMRFKAMGFFDPGGR
Ga0209814_1001397453300027873Populus RhizospherePPAARRPEASAPTAPVPTSATEDRRWTEITGVVESLVGRTLLLRSTEGRVAVDVSSLSPSLERYLTPGATVRVYGVPVELRFKAMGFFDSRDTRP
Ga0209814_1017315413300027873Populus RhizosphereYPAVISAPSSTPAVAATVPPASTPSKPATLDVAPTSAPMPSLARDDRRWTEITGVVEAVSGRTLVLRTTEGRVAVDMSNLSSNLERLVIPGSTVRVYGLPIEVRFKAMGFVDSGARP
Ga0209382_1220077823300027909Populus RhizosphereMPSLARDDRRWTEVTGIVEAVSGRTLVLRTTEGRVAVDMSSLSSNIDRIVTPGSTVRVYGLPIEVRFKAMGFVDSGARP
Ga0310813_1041146313300031716SoilPAPSPAKRPAIEVIATPTPAAVPASTTDDRRWTEVSGVVESIVGRTLVLRAPEGRVAVDVSGLSGNLERMVTPGATVRVYGVPVEMRFKALGFFDPGPGTRP
Ga0307473_1100707023300031820Hardwood Forest SoilPAVSTAAAPPKQPVPEVAPASAPMPSLARDDRRWTEVTGVVEAINGRTLVLRSAEGRVAVDMSSLSSNLERILTPGATVRVYGLPVEVRFKAMGFVSP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.