NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F084600

Metagenome / Metatranscriptome Family F084600

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F084600
Family Type Metagenome / Metatranscriptome
Number of Sequences 112
Average Sequence Length 56 residues
Representative Sequence MKLVIALFTLAVLGTAAAGVGFAAWTGHFGHHDANLRAIHYDTNYDLSASRRLPAE
Number of Associated Samples 101
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 75.89 %
% of genes near scaffold ends (potentially truncated) 32.14 %
% of genes from short scaffolds (< 2000 bps) 95.54 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (55.357 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(8.929 % of family members)
Environment Ontology (ENVO) Unclassified
(44.643 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(54.464 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 59.52%    β-sheet: 0.00%    Coil/Unstructured: 40.48%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF01702TGT 63.39
PF01799Fer2_2 17.86
PF00111Fer2 10.71
PF02738MoCoBD_1 2.68

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG0343Queuine/archaeosine tRNA-ribosyltransferaseTranslation, ribosomal structure and biogenesis [J] 63.39
COG1549Archaeosine tRNA-ribosyltransferase, contains uracil-DNA-glycosylase and PUA domainsTranslation, ribosomal structure and biogenesis [J] 63.39

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms55.36 %
UnclassifiedrootN/A44.64 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001686|C688J18823_10457135All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales822Open in IMG/M
3300002568|C688J35102_119101581Not Available638Open in IMG/M
3300002568|C688J35102_119506755Not Available708Open in IMG/M
3300003990|Ga0055455_10299964Not Available514Open in IMG/M
3300004081|Ga0063454_100773336All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium737Open in IMG/M
3300004156|Ga0062589_100403762All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1111Open in IMG/M
3300004463|Ga0063356_102804650Not Available750Open in IMG/M
3300004479|Ga0062595_101433039All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium632Open in IMG/M
3300004480|Ga0062592_100439333All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1054Open in IMG/M
3300004643|Ga0062591_102348272Not Available558Open in IMG/M
3300004643|Ga0062591_102803250Not Available516Open in IMG/M
3300005093|Ga0062594_102365079Not Available580Open in IMG/M
3300005167|Ga0066672_10896130Not Available550Open in IMG/M
3300005327|Ga0070658_11929058Not Available510Open in IMG/M
3300005335|Ga0070666_11290404Not Available545Open in IMG/M
3300005337|Ga0070682_100474333Not Available963Open in IMG/M
3300005337|Ga0070682_100801963Not Available765Open in IMG/M
3300005343|Ga0070687_101003066Not Available605Open in IMG/M
3300005343|Ga0070687_101374207All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria527Open in IMG/M
3300005347|Ga0070668_100669947All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium913Open in IMG/M
3300005355|Ga0070671_100498949All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1047Open in IMG/M
3300005365|Ga0070688_101177832Not Available615Open in IMG/M
3300005366|Ga0070659_101561938Not Available589Open in IMG/M
3300005367|Ga0070667_100310955All Organisms → cellular organisms → Bacteria → Proteobacteria1420Open in IMG/M
3300005438|Ga0070701_10374265All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales896Open in IMG/M
3300005439|Ga0070711_101039492Not Available704Open in IMG/M
3300005440|Ga0070705_101471240Not Available570Open in IMG/M
3300005454|Ga0066687_10694246All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300005457|Ga0070662_101487004Not Available584Open in IMG/M
3300005468|Ga0070707_101954329Not Available554Open in IMG/M
3300005526|Ga0073909_10065188All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae1361Open in IMG/M
3300005543|Ga0070672_100274113All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1425Open in IMG/M
3300005560|Ga0066670_11002617Not Available510Open in IMG/M
3300005578|Ga0068854_100567146All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales965Open in IMG/M
3300005616|Ga0068852_100769004Not Available976Open in IMG/M
3300005718|Ga0068866_10240768All Organisms → cellular organisms → Bacteria → Proteobacteria1102Open in IMG/M
3300005718|Ga0068866_10279747All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1033Open in IMG/M
3300005719|Ga0068861_101986568Not Available580Open in IMG/M
3300006034|Ga0066656_10352691All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales951Open in IMG/M
3300006041|Ga0075023_100632569Not Available502Open in IMG/M
3300006042|Ga0075368_10470739All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria558Open in IMG/M
3300006047|Ga0075024_100056618All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1648Open in IMG/M
3300006050|Ga0075028_100807846All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales572Open in IMG/M
3300006173|Ga0070716_101409745All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales567Open in IMG/M
3300006177|Ga0075362_10097644All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1370Open in IMG/M
3300006237|Ga0097621_101391702All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales664Open in IMG/M
3300006237|Ga0097621_102406929Not Available504Open in IMG/M
3300006580|Ga0074049_11959587Not Available624Open in IMG/M
3300006581|Ga0074048_13203397All Organisms → cellular organisms → Bacteria → Proteobacteria858Open in IMG/M
3300006606|Ga0074062_12418075Not Available561Open in IMG/M
3300006638|Ga0075522_10022943All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3900Open in IMG/M
3300006638|Ga0075522_10453098Not Available600Open in IMG/M
3300006791|Ga0066653_10497702Not Available617Open in IMG/M
3300009143|Ga0099792_10505553All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium757Open in IMG/M
3300009143|Ga0099792_11035844Not Available550Open in IMG/M
3300009174|Ga0105241_12201977Not Available547Open in IMG/M
3300009545|Ga0105237_11935762Not Available598Open in IMG/M
3300010044|Ga0126310_10934902Not Available678Open in IMG/M
3300010045|Ga0126311_10305765All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae1198Open in IMG/M
3300010045|Ga0126311_10832991All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium745Open in IMG/M
3300010399|Ga0134127_13312350Not Available527Open in IMG/M
3300010401|Ga0134121_11261626Not Available742Open in IMG/M
3300010401|Ga0134121_13104338Not Available512Open in IMG/M
3300011119|Ga0105246_11281998Not Available678Open in IMG/M
3300012096|Ga0137389_10850006All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860783Open in IMG/M
3300012211|Ga0137377_11458820All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium611Open in IMG/M
3300012212|Ga0150985_119621656Not Available637Open in IMG/M
3300012469|Ga0150984_115388286All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales542Open in IMG/M
3300012901|Ga0157288_10266067All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860583Open in IMG/M
3300012915|Ga0157302_10115351All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860868Open in IMG/M
3300012917|Ga0137395_10574366All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales814Open in IMG/M
3300012924|Ga0137413_11073774All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales635Open in IMG/M
3300012929|Ga0137404_10007526All Organisms → cellular organisms → Bacteria7411Open in IMG/M
3300012958|Ga0164299_11365845Not Available545Open in IMG/M
3300012989|Ga0164305_10979601All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales717Open in IMG/M
3300013297|Ga0157378_10285993All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes1591Open in IMG/M
3300013308|Ga0157375_12905810All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes572Open in IMG/M
3300014968|Ga0157379_10724887All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes935Open in IMG/M
3300014969|Ga0157376_12572299All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales549Open in IMG/M
3300015195|Ga0167658_1039222All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601208Open in IMG/M
3300015209|Ga0167629_1030791All Organisms → cellular organisms → Bacteria1899Open in IMG/M
3300015242|Ga0137412_10345381All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601160Open in IMG/M
3300015374|Ga0132255_102522616All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860785Open in IMG/M
3300017965|Ga0190266_10013715All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68602171Open in IMG/M
3300018468|Ga0066662_10816703All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860907Open in IMG/M
3300018476|Ga0190274_10494804All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1220Open in IMG/M
3300018482|Ga0066669_11053803All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales734Open in IMG/M
3300022756|Ga0222622_10322686All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601069Open in IMG/M
3300025893|Ga0207682_10631628Not Available504Open in IMG/M
3300025901|Ga0207688_10143677All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601406Open in IMG/M
3300025911|Ga0207654_10619839Not Available773Open in IMG/M
3300025918|Ga0207662_10104983All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68601755Open in IMG/M
3300025918|Ga0207662_10787777All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860670Open in IMG/M
3300025920|Ga0207649_11689886Not Available501Open in IMG/M
3300025924|Ga0207694_11459019All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales578Open in IMG/M
3300025927|Ga0207687_10926286Not Available746Open in IMG/M
3300025937|Ga0207669_10540880Not Available938Open in IMG/M
3300025940|Ga0207691_10093448All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68602693Open in IMG/M
3300025972|Ga0207668_11667850Not Available575Open in IMG/M
3300026075|Ga0207708_10629194Not Available912Open in IMG/M
3300028379|Ga0268266_10942458All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium835Open in IMG/M
3300028802|Ga0307503_10273479All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860836Open in IMG/M
3300031152|Ga0307501_10054827All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium902Open in IMG/M
3300031231|Ga0170824_117644404Not Available636Open in IMG/M
3300031366|Ga0307506_10272961All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860652Open in IMG/M
3300031716|Ga0310813_11684596All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae594Open in IMG/M
3300031908|Ga0310900_10944518Not Available706Open in IMG/M
3300031949|Ga0214473_11263715Not Available760Open in IMG/M
3300032174|Ga0307470_11583460All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales548Open in IMG/M
3300033004|Ga0335084_10064478All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68603789Open in IMG/M
3300033434|Ga0316613_10870282Not Available619Open in IMG/M
3300034268|Ga0372943_0550831Not Available755Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.93%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.14%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.36%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.36%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere5.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.46%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere4.46%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.57%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.57%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.57%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.57%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.68%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.68%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.68%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil1.79%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.79%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.79%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.79%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.79%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.79%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere1.79%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.79%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.89%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.89%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.89%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.89%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.89%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.89%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.89%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.89%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.89%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003990Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006042Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3Host-AssociatedOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006177Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006580Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006606Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006638Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-AEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1EnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015195Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)EnvironmentalOpen in IMG/M
3300015209Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3B, Proglacial river margin, by glacier terminus)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033434Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_bEnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J18823_1045713523300001686SoilMKLVIGLFALAVLGMGAVAIGFAVSAGHHGHHDANLRVIHYDTNYDLSASRRLPAE*
C688J35102_11910158113300002568SoilMRLVIGLFACAVLATAAAGFGIAAWTGHLGHHDANLRAIHYDTNYDLSAQRRLPAE*
C688J35102_11950675523300002568SoilMKLVIALFTLAVLGTAAASLFTAWTGHFGHHDANLRAIHYDTNYDLSASRRLPAE*
Ga0055455_1029996423300003990Natural And Restored WetlandsAAMRWTIALAVSVLLGTAAAGLGFTIWGDHSGHRDNLRVIHYNANYDLSAQRRVPVE*
Ga0063454_10077333623300004081SoilMKLVIALFTLAVLGTAAAGVGFAAWTGHFGHHDANLRPIHYDTNYD
Ga0062589_10040376223300004156SoilMKLVIALFALAVLGTAGAGIGLAVWTGHFGHHDANLRVIHYDTSYDLSAARRLPAE*
Ga0063356_10280465013300004463Arabidopsis Thaliana RhizosphereMRLLIGLFTFAMLAIAGASIGIAAWTGHLGHHDANLRAIHYDTSYDLSAQRRLPGE*
Ga0062595_10143303923300004479SoilMKLVIALFTLAVLGTAAASFGFTALTGHFGHHDANLRAIHYDTNYDLSASRRLP
Ga0062592_10043933333300004480SoilMRLVIGLATCAVLATAAACIGIAGWTGHLGHHDANLRVIHYDTNYDLSAQRRLPAE*
Ga0062591_10234827223300004643SoilMRLVTALFVLAMVATAASSIGFSLWDGHHGHNDANLRAIHYDTNYDLSAQRRLPAE*
Ga0062591_10280325013300004643SoilMRLVIGLFACAVLATAAAGFGIAAWTGHLGHHDANLRAIHYDTYYDLSAQRRLPVE*
Ga0062594_10236507923300005093SoilMRLVIGLATCAVLATAAACIGIAGWTGHLGHRDANLRVIHYDTNYDLSAQRRLPAE*
Ga0066672_1089613013300005167SoilRRYQPAGAAMKLAIALFTLAVLGTATIGIAAWTGHFGHHDANLRAIHYDTNYDLSAQRRQLPE*
Ga0070658_1192905813300005327Corn RhizosphereYDERYKPAGAAMKLSIGFLALAALVVAGVGLNAWMGHISHRDNGLRPIHYDTNYDLSAQRRIPAE*
Ga0070666_1129040413300005335Switchgrass RhizosphereQPAGAAMKLVIALFTLAVLGTAAASLFTAWTGHFGHHDANLRAIHYDTNYDLSASRRLPAE*
Ga0070682_10047433323300005337Corn RhizosphereMRLVTALFVLAMVATAAASIGFSLWDGHHGHNDANLRAIHYDTNYDLSAQRRLPAE*
Ga0070682_10080196313300005337Corn RhizosphereMRLSIGLLAFAVLLTASAGIGLGAWMGYIGHHDASLRAIHYDTNYDLSAQRRVPAE*
Ga0070687_10100306623300005343Switchgrass RhizosphereMRLVIGLCACAVLATAAAAIGIAAWTGHLSHHDANLRAIHYDTSYDLSAQRRLPAE*
Ga0070687_10137420723300005343Switchgrass RhizosphereMKLVIALFTLAVLGTAAAGVGFAAWTGHFGHHDANLRPIHYDTNYDLSASRRLPAE*
Ga0070668_10066994713300005347Switchgrass RhizosphereMKLVIALFALAVLGTAGAGIGLAAWTGHFGHQDANLRVIHYDTSYDLSAARRLPAE*
Ga0070671_10049894923300005355Switchgrass RhizosphereMKLLIALFALAVLGTAAAGIGIAVQTGHLGHRDASLRAIHYDTSYDLSASRRLPAE*
Ga0070688_10117783213300005365Switchgrass RhizosphereMRLVVALFVLAVVATAASSIGFSLWDGHHGHNDANLRAIHYDTNYDLSAQRRLPAE*
Ga0070659_10156193813300005366Corn RhizosphereMRLSIGLLAFAVLLTASASIGLGAWMGYIGHHDASLRAIHYDTNYDLSAQRRVPAE*
Ga0070667_10031095513300005367Switchgrass RhizosphereMRLSIGLLAFAVLLTASAGIGLGAWMGYIGHHDTSLRAIHYDTNYDLSAQRRVPAE*
Ga0070701_1037426523300005438Corn, Switchgrass And Miscanthus RhizosphereMRLVIGLFACAVLATAAACIGIAGWTGHLGHHDANLRAIHYDTNYDLSAQRRLPAE*
Ga0070711_10103949213300005439Corn, Switchgrass And Miscanthus RhizosphereMKLVIALFALAVLGTAAANFGFTAWTGHFGHHDANLRAIHYDTNYDLSASRRLPAE*
Ga0070705_10147124013300005440Corn, Switchgrass And Miscanthus RhizospherePAGAAMKLVIALFALAVLGTAGAGIGLAVWTGHFGHHDANLRVIHYDTSYDLSAQRRMPAE*
Ga0066687_1069424623300005454SoilMKLVIALFTLAVLGTAAASFGFTAWTGHFGHHDANLRAIHYDTNYDLSASRRLPAE*
Ga0070662_10148700413300005457Corn RhizosphereMRLVIGLFACAVLATAAACIGIAGWTGHLGHHDANLRAIHYDTNYDLSAHRRLPAE*
Ga0070707_10195432923300005468Corn, Switchgrass And Miscanthus RhizosphereMKLVIALFTLAVLGTGAAGVGFAAWTSHFGHRDANLRAIHYDTNYDLSASRRLPAE*
Ga0073909_1006518833300005526Surface SoilMKLVIALFTLAVLATVAAGVGFTAWTGHFGHHDANLRAIHYDTNYDLSASRRLPAE*
Ga0070672_10027411323300005543Miscanthus RhizosphereMRLVIGLFACAVLATAAACVGIAGWTGHLGHHDANLRAIHYDTNYDLSAQRRLPAE*
Ga0066670_1100261713300005560SoilMKLVIALFTLAVLGTAAAGVGFAAWTGHFGHHDANLRAIHYDTNYDLSASRRLP
Ga0068854_10056714623300005578Corn RhizosphereMRLVIGLATCAVLATAAACIGIAGWTGHLGHHDANLRAIHYDTNYDLSAQRRLPAE*
Ga0068852_10076900413300005616Corn RhizosphereMRLSIGLLAFAVLLTASASIGLGAWMGYIGHHDTSLRAIHYDTNYDLSAQRRVPAE*
Ga0068866_1024076823300005718Miscanthus RhizosphereMKLVIALFALAVLGTAGAGIGLAAWTGHFGHHDANLRVIHYDTSYDLSAARRLPAE*
Ga0068866_1027974733300005718Miscanthus RhizosphereMRLVIGLFACAVLATAAACIGIAGWTGHLGHRDANLRVIHYDTNYDLSAQRRLPAE*
Ga0068861_10198656813300005719Switchgrass RhizosphereNMTSCSTAGAAMRLVIGLFACAVLATAAACVGIAGWTGHLGHHDANLRAIHYDTNYDLSAQRRLPAE*
Ga0066656_1035269123300006034SoilMKLVIALFTLAALGMAAAGFGIAAWTGHFGHHDANLRAIHYDTNYDLSAQRRLPAE*
Ga0075023_10063256913300006041WatershedsFGYKTPPSTAGAAMKSVIALFASMMIGTAAAIGFAVWAGHDGHHDTNLRAIHYDTQYDLSAQRRMPAE*
Ga0075368_1047073923300006042Populus EndosphereMKLLIALFALAVLGTAAAGIGIAVQTGHLGHHDANLRAIHYDTNYDLSASRRLPAE*
Ga0075024_10005661833300006047WatershedsMKSVIALFASMMIGTVAAIGFAVWAGHDGHHDTNLRAIHYDTQYDLSAQRRMPAE*
Ga0075028_10080784623300006050WatershedsMKSVIALFASMMIGTAAAIGFAVWAGHDGHHDTNLRAIHYDTQYDLSAQRRMPAE*
Ga0070716_10140974523300006173Corn, Switchgrass And Miscanthus RhizosphereMKLVIGLFALAVLGTAAASVGFTAWTGHFGHHDANLRAIHYDTNYDLSASRRLPAE*
Ga0075362_1009764423300006177Populus EndosphereMKLVIALFVLAVLGTAAAGVGFAAWTGHLGHHDANLRVIHYDTNYDLSAARRLPAE*
Ga0097621_10139170223300006237Miscanthus RhizosphereMRLSIGLLAFAVLLTASAGIGLGAWMGYIGHHDASLRAIHYDTNYDLSAQRRVPTE*
Ga0097621_10240692923300006237Miscanthus RhizosphereMRLVIGLFACAVLATAAAAFGIAAWTGHLGHHDANLRAIHYDTSYDLSAQRRLPAE*
Ga0074049_1195958713300006580SoilSTAGAAMRLVIGLFACAVLATAAACIGIAGWTGHLGHHDANLRAIHYDTNYDLSAQRRLPAE*
Ga0074048_1320339723300006581SoilMKLVIALFALAVLGTAAANLGFTAWTGHFGHHDANLRAIHYDTNYDLSASRRLPAE*
Ga0074062_1241807513300006606SoilTSCSTAGAAMRLVIGLFACAVLATAAACIGIAGWTGHLGHHDANLRAIHYDTNYDLSAQRRLPAE*
Ga0075522_1002294343300006638Arctic Peat SoilMKSAIALFVLAVLGTASAGVGIAAWTGHLGHRESNMRAIHYDTNYDLSARRRMLVE*
Ga0075522_1045309813300006638Arctic Peat SoilTTAGAAIMRLMFALFMLAMLGTAAAGLGLAVWTGHLGHHDGLRTIHYDTKYDLSAQRRVPPSRY*
Ga0066653_1049770223300006791SoilMKLVIALFTLAVLGTAAAGVGFSAWTGHFGHHDANLRAIYYDTNYDLSGSRRVPAE*
Ga0099792_1050555313300009143Vadose Zone SoilMKLVIGLFTLAVLGTAAAGVGFTAWTGHFGHHDANLRAIHYDTNYDLSASRRLPAE*
Ga0099792_1103584423300009143Vadose Zone SoilMKLVIALFTLAVLGTAAAGVGFAAWTGHFGHHDANLRAIHYDTNYDLSASRRLPAE*
Ga0105241_1220197723300009174Corn RhizosphereMKLVIALFTLAVLGTAAAGVGFAAWTGHLGHHDANLRVIHYDTNYDL
Ga0105237_1193576213300009545Corn RhizospherePAGAAMKLVIALFTLAVLGTAAASLFTAWTGHFGHHDANLRAIHYDTNYDLSASRRLPVE
Ga0126310_1093490213300010044Serpentine SoilMKLVIALFTLAVLGTAGAGIGLAAWTGHFGHHDANLRPIHYDTNYDLSASRRLPAE*
Ga0126311_1030576513300010045Serpentine SoilMRLVIGLFACAVLATAAAGFGIAAWTGHLGHHDANLRAIHYDTNYDLSAQRR
Ga0126311_1083299123300010045Serpentine SoilMKLVIALFTLAVLGTAGAGIGLAAWTGHFGHHDANLRVIHYDTSYDLSAARRLPAE*
Ga0134127_1331235013300010399Terrestrial SoilLVTALFVLAMVATAASSIGFSLWDGHHGHNDANLRAIHYDTNYDLSAQRRLPAE*
Ga0134121_1126162623300010401Terrestrial SoilMRLVLGLLTCAVLATAAAGIGIAAWTGHLGHHDANLRAIHYDTSYDLSASRRLPAE*
Ga0134121_1310433823300010401Terrestrial SoilMRLMLGLLTCAVLATAAASIGIAAWTGHLGHHDANLRAIHYDTNYDLSAQRRLPAE*
Ga0105246_1128199823300011119Miscanthus RhizosphereMRLVIGLFACAVLATAAAGFGIAAWTGHLGHHDANLRVIHYDTNYDLSAQRRLPAE*
Ga0137389_1085000613300012096Vadose Zone SoilMKLVIGLFALALLGTAAAGIGFAAWTGHFGHHDANLRAIHYDTNYDLSASRRLPAE*
Ga0137377_1145882013300012211Vadose Zone SoilMKLVIALFTLAVLATAAAGVGFAAWTGHLGHRDATMRAIHYDTNYD
Ga0150985_11962165613300012212Avena Fatua RhizosphereMKLSTGLLALAALVIAAAGVGLNAWKGHVSHRDTSLRAIHYDTNYDLSAQRRIPAV*
Ga0150984_11538828623300012469Avena Fatua RhizosphereGAAMKLVIGLFALAVLGMGAAAIGFAVSAGHHGHHDANLRVIHYDTNYDLSASRRLPAE*
Ga0157288_1026606713300012901SoilAMRLVIGLFACAVLATAAACIGIAGWTGHLGHHDANLRAIHYDTNYDLSAQRRLPAE*
Ga0157302_1011535123300012915SoilMRLVIGLFACAVLATAAACIGIAGWTGHLGHHDANLRAIHYDTNYDLSAQRRLPA
Ga0137395_1057436623300012917Vadose Zone SoilMKLVIALFTLAVLGTAAAGVGFAAWTGHLGHRDATMRAIHYDTNYDLSASRRLPAE*
Ga0137413_1107377413300012924Vadose Zone SoilMKLVIGLFTLAVLGTAAAGVGFTAWTGHFGHHDANLRAIHYDTNYDLSASRRVPAE*
Ga0137404_10007526123300012929Vadose Zone SoilMKLVIALFTLAVLGTAAAGVGFSAWTGHFGHHDANLRAIHYDTNYDLSASRRVPAE*
Ga0164299_1136584523300012958SoilMRLVLGLLTCAVLATAAAGIGIAAWTGHLGHHDANLRAIHYDTYYDLSAQRRLPVE*
Ga0164305_1097960123300012989SoilAGAAMKLVIALFTLAVLGTAAASLFTAWTGHFGHHDANLRAIHYDTNYDLSASRRLPAE*
Ga0157378_1028599333300013297Miscanthus RhizosphereMRLMLGLLTCAVLATAAASIGIAAWTGHLGHHDANLRVIHYDTNYDLSAQRLLPAE*
Ga0157375_1290581013300013308Miscanthus RhizosphereMKLLIALFALAVLGTAAAGVGFAAWTGHLGHHDANLRVIHYDTNYDLSASRRLPVE*
Ga0157379_1072488713300014968Switchgrass RhizosphereKLVIALFTLAVLGTAAASFGFTALTGHFGHHDANLRAIHYDTNYDLSASRRLPAE*
Ga0157376_1257229923300014969Miscanthus RhizosphereMRLVTALFVLAVVATAASSIGFSLWDGHHGHNDANLRAIHYDTNYDLSAQRRLPAE*
Ga0167658_103922213300015195Glacier Forefield SoilMKSVIALFASMIIGTAAAIGFAVWAGHDGHHDTNLRAIHYDTQYDLSAQRRMPAE*
Ga0167629_103079123300015209Glacier Forefield SoilMRLVLGLLTCAVLATAAAGIGIAAWTGHLGHHDANLRVIHYDTNYDLSAQRRLPVE*
Ga0137412_1034538123300015242Vadose Zone SoilMKLVIALFALAVLGTAAAGFGIAAWTGHFAHHDANMRAIHYDSDYDLSAQRRLPAE*
Ga0132255_10252261623300015374Arabidopsis RhizosphereMRLVIGLLACAVLATAAACIGIAGWTGHLGHHDANLRAIHYDTNYDLSAQRRLPAE*
Ga0190266_1001371533300017965SoilMRLVIGLFACAVLATAAACIGIAGWTGHLGHHDANLRAIHYDTNYDLSAQRRLPAE
Ga0066662_1081670313300018468Grasslands SoilMKLAIALFTLAVLGTATIGIAAWTGHFGHHDANLRAIHYDTNYDLSAQRRQLPE
Ga0190274_1049480433300018476SoilMRLVIGLATCAVLATAAACIGIAGWTGHLGHRDANLRVIHYDTNYDLSAQRRLPAE
Ga0066669_1105380323300018482Grasslands SoilMKLVIALFTLAVLGTAAAGVGFSAWTGPFGHHDANLRAIHYDTNYDLSASRRLPAE
Ga0222622_1032268613300022756Groundwater SedimentMKLVIALFTLAVLGTAAAGVDFAAWTGHFGHHDANLRAIHYDTNYDLSASRRLPAE
Ga0207682_1063162813300025893Miscanthus RhizosphereMKLVIALFALAVLGTAGAGIGLAVWTGHFGHHDANLRVIHYDTSYDLSAARRLPAE
Ga0207688_1014367723300025901Corn, Switchgrass And Miscanthus RhizosphereMRLVIGLATCAVLATAAACIGIAGWTGHLGHHDANLRVIHYDTSYDLSAARRLPAE
Ga0207654_1061983913300025911Corn RhizosphereLAVLGTAGAGIGLAAWTGHFGHHDANLRVIHYDTSYDLSAARRLPAE
Ga0207662_1010498313300025918Switchgrass RhizosphereLFALAVLGTAGAGIGLAAWTGHFGHHDANLRVIHYDTSYDLSAARRLPAE
Ga0207662_1078777713300025918Switchgrass RhizosphereMRLVIGLCACAVLATAAAAIGIAAWTGHLSHHDANLRAIHYDTSYDLSAQRRLPAE
Ga0207649_1168988623300025920Corn RhizosphereMRLSIGLLAFAVLLTASAGIGLGAWMGYIGHHDASLRAIHYDTNYDLSAQRRVPTE
Ga0207694_1145901923300025924Corn RhizosphereMKLVIALFTLAVLGTAAAGVGFAAWTGHLGHHDANLRVIHYDTNYDLSASRRLPAE
Ga0207687_1092628613300025927Miscanthus RhizosphereAGAAMKLVIALFALAVLGTAGAGIGLAAWTGHFGHHDANLRVIHYDTSYDLSAARRLPAE
Ga0207669_1054088013300025937Miscanthus RhizosphereAAMKLVIALFALAVLGTAGAGIGLAVWTGHFGHHDANLRVIHYDTSYDLSAARRLPAE
Ga0207691_1009344833300025940Miscanthus RhizosphereMRLVIGLFACAVLATAAACVGIAGWTGHLGHHDANLRAIHYDTNYDLSAQRRLPAE
Ga0207668_1166785013300025972Switchgrass RhizosphereMKLVIALFALAVLGTAGAGIGLAAWTGHFGHQDANLRVIHYDTSYDLSAARRLPAE
Ga0207708_1062919413300026075Corn, Switchgrass And Miscanthus RhizosphereRKALYFSNVTSRLTAGAAMKWTIAFFMSMLLVTAAAEVSYAVWTGNLGHRDHLRVIHYDTSYDLSAQRRMPAE
Ga0268266_1094245813300028379Switchgrass RhizosphereMKLLIALFSLAVLGTAAAGIGIAIQTGHLGGHQDANLRTIHYDTNYDLSASRRLPAE
Ga0307503_1027347923300028802SoilMRLVIGLLACAVLATAAACIGIAGWTGHLGHHDANLRAIHYDTNYDLSAQRRLPAE
Ga0307501_1005482713300031152SoilMKLVIALFTLAVLGTAAAGVDFAAWTGHFGHHDANLRAIHYDTNYDLSA
Ga0170824_11764440423300031231Forest SoilMKSAIALFVLAVLGTASAGVGIAAWTGHLSHREANMRAIHYDTSYDLSARRRMLVE
Ga0307506_1027296113300031366SoilALFVLAMVATAASSIGFSLWDGHHGHNDANLRAIHYDTNYDLSASRRLPAE
Ga0310813_1168459613300031716SoilMKLVIALFTLAVLGTAAASLFSAWTGHFGHHDANLRAIHYDTNYDLSASRRLPPE
Ga0310900_1094451813300031908SoilFALAVLGTAGAGIGLAAWTGHFGHHDANLRVIHYDTSYDLSAARRLPAE
Ga0214473_1126371513300031949SoilMRLVIALFVLAVVASGTIGFGLSLWDGNVGHRDANLRAIHYDTTYDLSAQRRKPVE
Ga0307470_1158346023300032174Hardwood Forest SoilMRLVFALFVLAMVATAASSVGFSLWDGHRGHNDANLRAIHYDTNYDLSASRRLPVE
Ga0335084_1006447823300033004SoilMTAIKTAGAAMKWAIGLFLLAVLGTGGAVVGFSVWTGHLGHHDAALRAIHYDTNYDLSAQRRLPVE
Ga0316613_1087028223300033434SoilMRLVIALFVLAVVASGTIGFGLSLWDGNTGHRDANLRAIHYDTTYDLSAQRRKPVE
Ga0372943_0550831_52_2223300034268SoilMKLVIGLFALAVLGMGAVAIGFAVSTGHHGHHDANLRVIHYDTNYDLSASRRLPAE

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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