Metagenome Family F084592

Overview

Basic Information

• Family ID: F084592
• Family Type: Metagenome
• Number of Sequences: 112
• Average Sequence Length: 54 residues
• Representative Sequence: MNYFDLYSSYPDHTIAAAWDSQVKEADKTPWLAGTLTECGDELFARFATCY
• Number of Associated Samples: 92
• Number of Associated Scaffolds: 112

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 100.00 %
• % of genes near scaffold ends (potentially truncated): 12.50 %
• % of genes from short scaffolds (< 2000 bps): 10.71 %
• Associated GOLD sequencing projects: 86
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (89.286 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (16.071 % of family members)
• Environment Ontology (ENVO): Unclassified (26.786 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (55.357 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 53.16%
  β-sheet: 0.00%
  Coil/Unstructured: 46.84%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF16261	DUF4915	22.32
PF01075	Glyco_transf_9	12.50
PF05345	He_PIG	3.57
PF03160	Calx-beta	2.68
PF04392	ABC_sub_bind	1.79
PF13946	DUF4214	1.79
PF12695	Abhydrolase_5	1.79
PF00343	Phosphorylase	0.89
PF00923	TAL_FSA	0.89
PF13432	TPR_16	0.89
PF05199	GMC_oxred_C	0.89
PF12770	CHAT	0.89
PF02452	PemK_toxin	0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	12.50
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.79
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	0.89
COG0176	Transaldolase/fructose-6-phosphate aldolase	Carbohydrate transport and metabolism [G]	0.89
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.89
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.89

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.29 %
All Organisms	root	All Organisms	10.71 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.29 %
cellular organisms	root	All Organisms → cellular organisms	10.71 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.29 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.71 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.29 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.89 %

Level 5

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.29 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.29 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.89 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.29 %
Chloroflexi bacterium RBG_16_47_49	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_47_49	0.89 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300004157|Ga0062590_102556733	All Organisms → cellular organisms → Bacteria	542
3300005290|Ga0065712_10079730	All Organisms → cellular organisms → Bacteria	3181
3300005295|Ga0065707_10058986	All Organisms → cellular organisms → Bacteria	851
3300005441|Ga0070700_101164426	All Organisms → cellular organisms → Bacteria	642
3300005457|Ga0070662_100507319	All Organisms → cellular organisms → Bacteria	1007
3300005564|Ga0070664_102252269	Not Available	517
3300006845|Ga0075421_101987134	All Organisms → cellular organisms → Bacteria	620
3300010371|Ga0134125_12740380	All Organisms → cellular organisms → Bacteria	536
3300010375|Ga0105239_12920178	All Organisms → cellular organisms → Bacteria	557
3300010397|Ga0134124_11108330	All Organisms → cellular organisms → Bacteria	808
3300025911|Ga0207654_11164826	All Organisms → cellular organisms → Bacteria	562
3300025915|Ga0207693_11380594	Not Available	524
3300025945|Ga0207679_10045839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_47_49	3165
3300025981|Ga0207640_11559389	All Organisms → cellular organisms → Bacteria	594

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.82%
Host-Associated	Host-Associated	40.18%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.11%
Plants	Host-Associated → Plants	40.18%
Aquatic	Environmental → Aquatic	10.71%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere	30.36%
Sediment	Environmental → Aquatic → Sediment	10.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.93%
Floodplain	Environmental → Terrestrial → Floodplain	1.79%
Roots	Host-Associated → Plants → Roots	0.89%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	22.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.71%
Loam	Environmental → Terrestrial → Soil → Loam	9.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.57%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	22.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.79%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.89%

Habitat

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	16.07%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	8.04%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.25%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	6.25%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.57%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.68%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.79%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Arabidopsis Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental
3300012502	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610	Host-Associated
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental
3300014872	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT790_16_10D	Environmental
3300014882	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231B'_16_10D	Environmental
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated
3300015372	Soil combined assembly	Host-Associated
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated
3300015374	Col-0 rhizosphere combined assembly	Host-Associated
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated
3300026111	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1 (SPAdes)	Environmental
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_02771460	2199352025	Soil	MNYLDLYSSYPDHTIAAAWDSQVKEADKNPWLSEALKQYGDELFARFAACYAELRACLAA
JGI10214J12806_120451071	3300000891	Soil	MNYFDQYSSYPDHTIAAAWDSQVKEAAQTPGLAEIFLPRGSELFPRFAACYAELS
Ga0062589_1028965041	3300004156	Soil	MNYFDLNSSYPDHTIAAAWDSQVKERDKTPWLADTLTECVDELFSRFA*
Ga0062590_1025567331	3300004157	Soil	MNYLDLYSSYPDRAITSAWDAQLKYESKNPWLNEPLRRYGDELFARFAACYTELRALPRGARRRLQRHLARSTDF
Ga0062592_1013630331	3300004480	Soil	MNYFDLYSLYPDHTIAAAWDCQVKEAETTPELADALMRRGGDLFPRFAVCYAELRALPRG
Ga0062591_1019565621	3300004643	Soil	MNYLDLYSSYPDRTITSAWDAQLRYGRKNPWLNEALRRYGDELFARFAACYTELRALPRGAR
Ga0065712_100797303	3300005290	Miscanthus Rhizosphere	MNYLDLYSSYPDRTITSAWDAQLKYGSKNPWLNQALMRYGDELFARFAACYMELRALPRAARRRLQRRLARSTDFGAA
Ga0065705_106436671	3300005294	Switchgrass Rhizosphere	MNYLDLYSSHPDRIITSAWDSQLKKAGKNPWLNEALRRCGDELFARFAECYAELRGL
Ga0065707_100589862	3300005295	Switchgrass Rhizosphere	MNYLDLYSSYPDRTITSAWDAQLKYGSKNPWLNQALMRYGDELFARFAACYTELRALPRAARRRLQHRLARSTDF
Ga0070667_1017700912	3300005367	Switchgrass Rhizosphere	MNYLDLYSSYPDHTIAAAWDSQVKEADNTLWLADTLTECGDELSARFAACY
Ga0070700_1011644261	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MNYLDLYSSYPDRTIASAWDAQLKYGSKNPWLNEALRRYGDELFARFAACYTELRALPRGARRALQR
Ga0070694_1019158232	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MNYFNPYSSYPDHTIAAAWDSQVKEAAQTPGLGEIFLPRGSELFPRFA
Ga0070662_1005073192	3300005457	Corn Rhizosphere	MNYLDLYSSYPDRTITSAWNSQIEYAKKNPWLNEALRRCGGDLFGCFAACYAELRALPRGARRSLQRRLARSRDV
Ga0070662_1012641542	3300005457	Corn Rhizosphere	MNYFDLYSSYSDPTIAAAWESQVKEVDKTLCLAEKLATRESELF
Ga0070704_1020455331	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MNYLDLYSSYPDHTIAAAWDSQVKEADKNPWLSEALKQYGDELFARFA
Ga0070664_1022522691	3300005564	Corn Rhizosphere	MNYLDLYSSYPDRTITSAWDAQLKYGSKNPWLNEALRRYGDELFARFAACYADLRALPRGARRRLQRRLVRSS
Ga0066903_1017971361	3300005764	Tropical Forest Soil	MNYFDLYSSYPDRTIAAAWDSQVKEAGSNLWFAGTLSECGDDLFARFAACYA
Ga0066903_1079090651	3300005764	Tropical Forest Soil	MNYLDLYSSYPDRTITSAWNSQLEYANKNPWLREALKQCGDELFARFAACYAELRALPRGARR
Ga0075288_10629852	3300005874	Rice Paddy Soil	MNYLDLYSSYPDHTITVAWDCQITEAAQVPWLKELLLRGGSELFPRFAV
Ga0075432_101312391	3300006058	Populus Rhizosphere	MNYFDLYSSYPDRTIATAWDSQVKEADKTPWLAGNLTECGDELFARFAAC
Ga0070716_1017933041	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MNYFDLYSSYPDHTIAAAWDSQVKEADKTPWLAGTLTECGDELFARFATCY
Ga0079222_117374922	3300006755	Agricultural Soil	MNYLDLYSSYPDRTITSAWDAQLKYESKNPWLNEALRRYGDELFARFAACYTELRALPRGARRR
Ga0075428_1009860972	3300006844	Populus Rhizosphere	MNYFDLYSSYPDRTIAAAWDSQVKEADKTPWLAGTLTECGAELFARFAARYGELRALPRSAR
Ga0075428_1015655912	3300006844	Populus Rhizosphere	MNYFDLYSSYPDPTIAAAWDSQVKEADKTPWLADILTGCGDE
Ga0075421_1019871342	3300006845	Populus Rhizosphere	MKYFDLYASYPDYTIAAAWDSRVKEAEKTPWLANTLRQCSDELIARFALRYTELCALPRGNRRA
Ga0075431_1019617072	3300006847	Populus Rhizosphere	MKYFDLYASYPDYTIAAAWDSRVKEAEKTPWLANTLRQCSDELIARFALR
Ga0075433_100955191	3300006852	Populus Rhizosphere	MNYFDLYSSYPDRTIAAAWDSQVKEADQTPWLADTLTECGGELFSRFAKCYAELRAL
Ga0075425_1022552702	3300006854	Populus Rhizosphere	MDYFTLYSSYPDHTIAAAWDSQVKGADTTPWLGDALTDCGEELFGRFAECYAEL
Ga0075425_1027435782	3300006854	Populus Rhizosphere	MNYLDLYSSYTDHTIAAAWDSQVKEADKNPWLSEALKQYGDELFARFAAGYADLRA
Ga0075434_1002763433	3300006871	Populus Rhizosphere	MNYFDLYSSYPDRTIAAAWDSQVKEADQTPWLADTLTECGGELFSRFAKCYAELRALPRCARR
Ga0075424_1012139782	3300006904	Populus Rhizosphere	MNYFDLYSSYPDHTIIAAWDCQMKDAAQTPWLKELLLRRSSELFPRFAACYAE
Ga0075419_104343871	3300006969	Populus Rhizosphere	MNYLDLYSYPDHTIAAAWDSQVKEADKNPWLSEALKQYGDELFARFAACYADLRAL
Ga0075435_1006737812	3300007076	Populus Rhizosphere	MDYFTLYSSYPDHTIAAAWDSQVKGADTTPWLTECGGELFARFAACYAE
Ga0075418_111486832	3300009100	Populus Rhizosphere	MNYFDLYSSDPDPTIAAAWDSQVKAADNTPWLTDTLAECGDELFARFAACYAELRA
Ga0075418_121168741	3300009100	Populus Rhizosphere	MSYFDRYSSYPDHTIAAAWDSQVKAADNRLAGTLTESEDQLFARFAAC
Ga0114129_121544082	3300009147	Populus Rhizosphere	MNYFDLYSSYPDHTITAAWDCQMTEATQTPWLKELLLRRG
Ga0105248_127582592	3300009177	Switchgrass Rhizosphere	MNYLDLYSSYPDRTITSAWNSQIEYAKKNPWLNEALRRCGGDLFGCFAACYAELRALP
Ga0105252_100548951	3300009678	Soil	MNYFNLYSSYPDPTITAAWDSQIKEADRTPWLADNLAECESEL
Ga0126380_116959341	3300010043	Tropical Forest Soil	MNYFDLYSSYPDRTIAAAWDSQVKEVDTTPWLADTLTECGGELFARF
Ga0126382_112553501	3300010047	Tropical Forest Soil	MNYFDLYSSYPDRTIAAAWESQVKEADNTWLAGTLSECGDDLFARF
Ga0126382_124412592	3300010047	Tropical Forest Soil	MNYFDLYSSYPDRTIAAAWESQVKEADNTWLAGTLSECGDD
Ga0126370_101711192	3300010358	Tropical Forest Soil	MNYFDLYSSYPDQTIAAAWESQVKKTDNTWLAGTLSECGDDLFTRFAA
Ga0126370_110110092	3300010358	Tropical Forest Soil	MNYLNLPSSYPDPTIAAAWDSQAKEADKTPWLADTLTE
Ga0126376_110524002	3300010359	Tropical Forest Soil	MNYLNLSSSYPDPTIAAAWDSQAKEADKTPWLADTLTER
Ga0126377_128220952	3300010362	Tropical Forest Soil	MNYFDLYSSYPDRTIAAAWDSQVKEADNTPWLACTLTECGDELFTRFAACYAELRALPRSAR
Ga0134125_127403802	3300010371	Terrestrial Soil	MNYLDLYSSYPDRTITSAWDAQLKYGSKNPWLNEALRRYGDELFARFAAYYSDLRALPRGARRAIQRRIARSSEL
Ga0105239_106297881	3300010375	Corn Rhizosphere	MNYVDLYSSYPDSTIAAAWDSQVKEADKNPWLSEVLKQYGDELFARFAACYADLRALPRN
Ga0105239_129201782	3300010375	Corn Rhizosphere	MNYLDLYYPDRTITSAWDAQLRYGRKNPWLNEALRRYGDELFARFAACYADLHALPRGARRTLQRRIARSNE
Ga0126381_1032684591	3300010376	Tropical Forest Soil	MNYLNLSSSYPDATIASAWDSQVKQANNTPWLDDTLTECGDELFARFAACYAELRALP
Ga0126381_1046830691	3300010376	Tropical Forest Soil	MNYFTLYSSYPDHTIAAAWDSQVKEADTTPWLTDCGDELFARFAACYADLRALPRAARR
Ga0134124_111083302	3300010397	Terrestrial Soil	MNYLDLYSSYPDRTVTSAWNSQIDYANKNPWLSEALKRCGDELFTRFAAYYAELRALPRGARRRLQRRLVRSSNFAV
Ga0126383_111071431	3300010398	Tropical Forest Soil	MNYLNLPSSYPDPTIAAAWDSQAKEADKTPWLADTLTERGGELFARF
Ga0126383_123068182	3300010398	Tropical Forest Soil	MNYFDLYSSYPDRTIAAAWDSQVKEADNNPWLACTLTECGGELFARFAACYADLRALPRSAR
Ga0134122_124351201	3300010400	Terrestrial Soil	MNYFDLYSSYSDPTIAAAWDSQVKEVDRTSWLAENLAMRESELFARF
Ga0134123_120288681	3300010403	Terrestrial Soil	MNYIDLYSSYSDPTIAAAWDSQVKEVDRTSWLAENLAMRESELFARFAACYAELS
Ga0137364_106386121	3300012198	Vadose Zone Soil	MNYFDLYSSYSDPTIAAAWESQVKEADKTLWLAENLATRESELFARFAACYAELSA
Ga0137374_101115382	3300012204	Vadose Zone Soil	MNYLDLYSSYPDRTITAAWDSQVKEADRISWFADILTERSGELFSRFATCYAELRALPR
Ga0137362_108972092	3300012205	Vadose Zone Soil	MNYFNLYSSYPDHTIAAAWDSQVKAADKTPWLADTLTRLRGFEAK*
Ga0137367_110696042	3300012353	Vadose Zone Soil	MNYFDLYSSYPDQTITAAWDSQLSQAAQTPWFKEILLRRGSEL
Ga0137375_103096572	3300012360	Vadose Zone Soil	MNYLDLYSSYPDRTITAAWDSQVKEADRISWFADILTERSGELFSRFA
Ga0137375_107501942	3300012360	Vadose Zone Soil	MNYLDLYTSYPDRTITAAWDSQVKEADRISWFADILTERSGELFSRFA
Ga0157347_10363571	3300012502	Arabidopsis Rhizosphere	MNYLDLYSSYPDHTIAAAWDSQVKDADKNPWLSVALKQYGDV
Ga0126375_119190171	3300012948	Tropical Forest Soil	MNYFDLYSSYPDHTIASAWDSQVKEAEKTPWLGDALTDCGEELFGRFAECYAELRAL
Ga0126369_115604522	3300012971	Tropical Forest Soil	MNYLNLSSSYPDATIASAWDSQVKQANNTPWLDDTLTECG
Ga0164307_107477142	3300012987	Soil	MNYLDLYSSYPDRTITSAWDAQLKYGSKNPWLNQALMRYGDELFARFAACYME
Ga0157374_117887931	3300013296	Miscanthus Rhizosphere	MNYLDLYSSYPDRTITSAWDAQLKYGSKNPWLNEALRRYGDELFARFAACYADLHALPRGARRT
Ga0075309_10696012	3300014268	Natural And Restored Wetlands	MKYFDLYASYPDYTIAAAWESQIKEADRSPWLADTLTESGDELFARFAACYAELRAL
Ga0075326_10986731	3300014271	Natural And Restored Wetlands	MKYFDLYASYPDYTIAAAWESQIKEADRSPWLADILRQCGDELFAGFAARYTELGALPRGTR
Ga0180087_10979681	3300014872	Soil	MNYFDLYSSYPDRTIAAAWDSQVKKADNTQWLAATLTECGGELFARF
Ga0180069_10995561	3300014882	Soil	MNYFNLVSMYPDPTIAAAWESQIKEADKTAWLADTLKHCGNELFGRFATRYAELR
Ga0132258_102334084	3300015371	Arabidopsis Rhizosphere	MNYLDLYSSYPDRIISAAWDSQFKEASKSSWLAGALIERSDKLFARFAASYVELRSMRRGARRA
Ga0132256_1000824781	3300015372	Arabidopsis Rhizosphere	MNYLDLYPSYPDRSVTSAWNSQLKYAKKDPWLNEALRRCGDELFARFAGCYADLR
Ga0132256_1003293632	3300015372	Arabidopsis Rhizosphere	MNYIDLYSSYSDPTIAAAWESQVKEVDKTSWLAEKLATRESELFA
Ga0132257_1024339881	3300015373	Arabidopsis Rhizosphere	MNYLDVYSSYPKHAITAAWDSQVKEADKNPWLSAALKQYGDELF
Ga0132255_1001408681	3300015374	Arabidopsis Rhizosphere	MNYLDLYSSYPDRTITSAWDAQLTYGSKNPCLNEALRRYGDELFARFAACYTELRALPRGARRR
Ga0132255_1012000051	3300015374	Arabidopsis Rhizosphere	MNYLGLYSSYPDRTIAGVWESQVKEADNTPGLADALTRCGEELFARFVTCYAELKARP
Ga0132255_1025038491	3300015374	Arabidopsis Rhizosphere	MNYLDLYSSHPDRIITPAWDSQLKKAGKNPWLNEALRRCGDELFARFAECYAELRGLPRG
Ga0132255_1036050811	3300015374	Arabidopsis Rhizosphere	MNYFDLYSSYSDPTIAAAWESQVKEVDKTSWLAEKLATRESELFARFAACYVD
Ga0132255_1052081841	3300015374	Arabidopsis Rhizosphere	MNYFDLYSSYSDPTIAAAWESQVKEVDKTSWLAEKLATRESELFA
Ga0184626_102862841	3300018053	Groundwater Sediment	MNYFDLYSLNPNHTLAAAWDSQVKEAAQTPGLAEIFLPRGSELFPRFAA
Ga0184637_104597412	3300018063	Groundwater Sediment	MNYFDLYSSYPDRTIAAAWDSQVKEAVKTPWLADTLTECGGELFSRFATCYAELSALPRSARRAI
Ga0184635_100307944	3300018072	Groundwater Sediment	MNYFDLYSSYPDPTIATAWDSQVKEADNTLWLADTLTACGDELFVRFA
Ga0184640_100402412	3300018074	Groundwater Sediment	MNYFDLYSTYPDHTITAAWDSQVKEADKTPWLTDTLTECGGELSSRFAARYAELRALPR
Ga0184640_101720411	3300018074	Groundwater Sediment	MNYFDLYSAYPDHTIAAAWDSQVKEADKTPWLADTLTECGGELFTRFA
Ga0184625_101748721	3300018081	Groundwater Sediment	MNYIDLYSSYPDPTIAAAWDSQVKEVDKTSWLAEKLATRERAVCAFC
Ga0184625_101834581	3300018081	Groundwater Sediment	MNYFDLYSSYSDPTIATAWESQVKEADKTLWLAEKLATRESELFTHFAACYADLRAL
Ga0184639_101561001	3300018082	Groundwater Sediment	MNYFDLYSSYPDHTITAAWDCQMTEAAQTPWLKELLLRRGSDLFP
Ga0184639_105094781	3300018082	Groundwater Sediment	MNYFDLYASYPDQTVAAAWDSQVKEADKTPGLPEILLPCSGELFARFA
Ga0207685_100690092	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MNYIDLYSSYSDPTIAAAWESQVKEVDKTSWFAQQLATRESELFARFA
Ga0207654_111648262	3300025911	Corn Rhizosphere	MNYLDLYSSYPDRTITSAWDAQLKYGSKNPWLNEALRRYGDELFARFAACYADLRALPRGARRRLQRR
Ga0207693_113805941	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MNYLDLYSSYPDRTITSAWDAQLKYESKNPWLNEALRRCGDELFARFAACYADLRALPRGARRRLQRRL
Ga0207662_106311033	3300025918	Switchgrass Rhizosphere	MNYLDLYSSYPDRTIAGVWESQVKEANDTPGLADALTRRGEELFARFVTCYA
Ga0207701_107693761	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MNYFDLYSSYPDSTIAAAWNSQVKEADKTLCLAEELATRESELFARFAACYSE
Ga0207690_100464021	3300025932	Corn Rhizosphere	MNYLDLYSSYPDRTITSAWNSQLEYANKNPWLNKALQRCGGELFGRFAACYAELRAL
Ga0207686_114141501	3300025934	Miscanthus Rhizosphere	MNYFDLYSSYPDSTIAAAWNSQVKEADKTLCLAEELA
Ga0207709_115517232	3300025935	Miscanthus Rhizosphere	MPRSTTAVPDHTIAAAWDSQVKDADKNPWLSVALKQYGDELFARFAACY
Ga0207679_100458391	3300025945	Corn Rhizosphere	MNYLDLYYPDRTITSAWNSQLEYASKNPWFSEALKQCGDELFARFAACYGELRALPRGARRRLQRRLVR
Ga0207640_115593891	3300025981	Corn Rhizosphere	MNYLDLYYPDRTITSAWNSQLEYASKNPWFSEALKQCGDELFARFAACYGELRALPRGARRRLQRRLV
Ga0207658_107083181	3300025986	Switchgrass Rhizosphere	MNYLDLYSSYPDRTIAGVWESQVKEANDTPGLADALTRRGEELFASFVTCYA
Ga0207708_101470751	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MNYFDLYSSYSDPTIAAAWESQVREVDKTSWLAEKLATRESELFARFA
Ga0207648_112954961	3300026089	Miscanthus Rhizosphere	MNYLDLYSSYPDHTIAAAWDSQVKEADKNPWLSAALKQYGDELFARGVALLP
Ga0208291_10654951	3300026111	Natural And Restored Wetlands	MKYFDLYASYPDYTTAAAWESQIKEADRSPWLADTLT
Ga0209684_10501861	3300027527	Tropical Forest Soil	MNYFDLYSSYPDHTIAAAWDSQVKEADTTPWLTDCGDELFARFA
Ga0209481_102600202	3300027880	Populus Rhizosphere	MNYFDLYSSYPDRTIAAAWDSQVKAADNTPWLTDTLAECGDEL
Ga0209481_105128511	3300027880	Populus Rhizosphere	MNYLDLYSSYPDHSIAAAWDSQVKEADKNPWLSEALKQYGDELFARFAACYADL
Ga0209382_113649511	3300027909	Populus Rhizosphere	MNYFDLYSLYPDHTIAAAWDCQVKEAETTPELADALMQRGRDLFPRFAV
Ga0306921_107262982	3300031912	Soil	MNYFDLYSSYPDRTIAAAGDSQVKEADTTPWLNDCGGEVFTRFAACYAELRALPRG
Ga0307470_106163261	3300032174	Hardwood Forest Soil	MNYLDLYSSYPDHTIAAAWDSQVKDADKNPWLSVALKQYGDELFARFAA
Ga0307471_1036739981	3300032180	Hardwood Forest Soil	MNYLDLYSSYPDHTIAAAWDSQVKEADKNPWLNEALKQYGDELFARFAACYAELRGLPRG
Ga0306920_1009378472	3300032261	Soil	MNYLDLYSSYPDRTITSAWEAQLKAADNTPWFNEALRRCGDELFARFAACYADLR
Ga0364925_0183329_624_767	3300034147	Sediment	MKYFDLYASYPDYLIAAAWDSQVKEAGTTPWLADTLRQCGNELFARFA
Ga0364932_0062723_1289_1402	3300034177	Sediment	MQYFDLYASYPDYTIAAAWDSQVKEADKTPWLAGTLAE