Metagenome / Metatranscriptome Family F084574

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084574
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	53 residues
Representative Sequence	MDNAARTRQRVLALFLPIAAVLYISAEALSPKGTDQVITTTATALKVLPIA
Number of Associated Samples	98
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.28 %
% of genes near scaffold ends (potentially truncated)	88.39 %
% of genes from short scaffolds (< 2000 bps)	89.29 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.679 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.179 % of family members)
Environment Ontology (ENVO)	Unclassified (26.786 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.821 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 55.70% β-sheet: 0.00% Coil/Unstructured: 44.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF12802	MarR_2	6.25
PF14329	DUF4386	4.46
PF00753	Lactamase_B	3.57
PF07883	Cupin_2	2.68
PF04024	PspC	2.68
PF01593	Amino_oxidase	1.79
PF04227	Indigoidine_A	0.89
PF00313	CSD	0.89
PF07690	MFS_1	0.89
PF01906	YbjQ_1	0.89
PF03313	SDH_alpha	0.89
PF04672	Methyltransf_19	0.89
PF03176	MMPL	0.89
PF09286	Pro-kuma_activ	0.89
PF13472	Lipase_GDSL_2	0.89
PF02077	SURF4	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	0.89
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.89
COG1760	L-serine deaminase	Amino acid transport and metabolism [E]	0.89
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.89
COG2313	Pseudouridine-5'-phosphate glycosidase (pseudoU degradation)	Nucleotide transport and metabolism [F]	0.89
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.89
COG4934	Serine protease, subtilase family	Posttranslational modification, protein turnover, chaperones [O]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.68 %
Unclassified	root	N/A	22.32 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.68 %
Unclassified	root	N/A	22.32 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.68 %
Unclassified	root	N/A	22.32 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	71.43 %
Unclassified	root	N/A	22.32 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.89 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	69.64 %
Unclassified	root	N/A	22.32 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	58.04 %
Unclassified	root	N/A	22.32 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	38.39 %
Unclassified	root	N/A	22.32 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	3.57 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.68 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.89 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.89 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	38.39 %
Unclassified	root	N/A	22.32 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	3.57 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.79 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.89 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.89 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.89 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	38.39 %
Unclassified	root	N/A	22.32 %
Dactylosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium	3.57 %
unclassified Streptosporangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae	1.79 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.89 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.89 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.89 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	38.39 %
Unclassified	root	N/A	22.32 %
Dactylosporangium siamense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium → Dactylosporangium siamense	3.57 %
Streptosporangiaceae bacterium NEAU-GS5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	1.79 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.89 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.89 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.89 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	38.39 %
Unclassified	root	N/A	22.32 %
Dactylosporangium siamense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium → Dactylosporangium siamense	3.57 %
Streptosporangiaceae bacterium NEAU-GS5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	1.79 %
Streptomyces sp. 846.5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 846.5	0.89 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.89 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.89 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.89 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004091\|Ga0062387_101346656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	566	Open in IMG/M
3300004120\|Ga0058901_1559941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300004152\|Ga0062386_101695540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300004477\|Ga0068971_1563022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300004478\|Ga0068972_1012057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	772	Open in IMG/M
3300004631\|Ga0058899_10152931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	720	Open in IMG/M
3300004635\|Ga0062388_100885131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	856	Open in IMG/M
3300005436\|Ga0070713_100300147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1478	Open in IMG/M
3300005445\|Ga0070708_101777173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300005535\|Ga0070684_101243737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	700	Open in IMG/M
3300005547\|Ga0070693_100613194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	787	Open in IMG/M
3300006028\|Ga0070717_10603788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	995	Open in IMG/M
3300006028\|Ga0070717_11725114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	566	Open in IMG/M
3300006102\|Ga0075015_100245939	Not Available	968	Open in IMG/M
3300006174\|Ga0075014_100441146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	718	Open in IMG/M
3300006854\|Ga0075425_101034441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	936	Open in IMG/M
3300006854\|Ga0075425_102764278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300009162\|Ga0075423_11285328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium → Dactylosporangium siamense	782	Open in IMG/M
3300009162\|Ga0075423_11955969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300009174\|Ga0105241_10921488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	813	Open in IMG/M
3300009520\|Ga0116214_1215244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	725	Open in IMG/M
3300009630\|Ga0116114_1165089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300009700\|Ga0116217_10241762	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300009839\|Ga0116223_10301828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	956	Open in IMG/M
3300010371\|Ga0134125_12457996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium → Dactylosporangium siamense	566	Open in IMG/M
3300010373\|Ga0134128_10071001	All Organisms → cellular organisms → Bacteria	3991	Open in IMG/M
3300010396\|Ga0134126_11218311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium → Dactylosporangium siamense	836	Open in IMG/M
3300010876\|Ga0126361_10496143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	757	Open in IMG/M
3300011120\|Ga0150983_15562202	Not Available	614	Open in IMG/M
3300014493\|Ga0182016_10449694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	753	Open in IMG/M
3300017821\|Ga0187812_1036236	Not Available	1683	Open in IMG/M
3300017926\|Ga0187807_1158863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	724	Open in IMG/M
3300017932\|Ga0187814_10248987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	673	Open in IMG/M
3300017932\|Ga0187814_10374497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300017942\|Ga0187808_10254015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	787	Open in IMG/M
3300017946\|Ga0187879_10341277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	831	Open in IMG/M
3300018001\|Ga0187815_10540915	Not Available	500	Open in IMG/M
3300018007\|Ga0187805_10612021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300018007\|Ga0187805_10622871	Not Available	511	Open in IMG/M
3300018035\|Ga0187875_10621890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300018060\|Ga0187765_11155085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300019165\|Ga0184589_100148	Not Available	745	Open in IMG/M
3300019176\|Ga0184596_121192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	638	Open in IMG/M
3300019185\|Ga0184587_116594	Not Available	747	Open in IMG/M
3300019187\|Ga0184584_136627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	765	Open in IMG/M
3300020581\|Ga0210399_10964646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	688	Open in IMG/M
3300020583\|Ga0210401_11331809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	576	Open in IMG/M
3300021180\|Ga0210396_11187430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300021401\|Ga0210393_10934140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	703	Open in IMG/M
3300021404\|Ga0210389_10690493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	800	Open in IMG/M
3300021406\|Ga0210386_11056438	All Organisms → cellular organisms → Bacteria → Terrabacteria group	691	Open in IMG/M
3300021407\|Ga0210383_10027889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4718	Open in IMG/M
3300021407\|Ga0210383_10713910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	861	Open in IMG/M
3300021407\|Ga0210383_10775772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	821	Open in IMG/M
3300021474\|Ga0210390_10238236	Not Available	1540	Open in IMG/M
3300021474\|Ga0210390_10765785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	801	Open in IMG/M
3300021475\|Ga0210392_10404038	Not Available	996	Open in IMG/M
3300021475\|Ga0210392_10585350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	827	Open in IMG/M
3300021477\|Ga0210398_11383258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Dactylosporangium → Dactylosporangium siamense	551	Open in IMG/M
3300021478\|Ga0210402_10022290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5430	Open in IMG/M
3300021559\|Ga0210409_11718766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	504	Open in IMG/M
3300022708\|Ga0242670_1064098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300023658\|Ga0184591_104405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300023677\|Ga0247543_103663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300025588\|Ga0208586_1095252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	645	Open in IMG/M
3300025633\|Ga0208480_1083431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	776	Open in IMG/M
3300025905\|Ga0207685_10357533	Not Available	738	Open in IMG/M
3300025906\|Ga0207699_10676309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	755	Open in IMG/M
3300025911\|Ga0207654_11055291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	592	Open in IMG/M
3300025915\|Ga0207693_10966655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	651	Open in IMG/M
3300025928\|Ga0207700_10801861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	842	Open in IMG/M
3300027058\|Ga0209111_1023137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	748	Open in IMG/M
3300027096\|Ga0208099_1023374	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	873	Open in IMG/M
3300027110\|Ga0208488_1061949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300027158\|Ga0208725_1056661	Not Available	584	Open in IMG/M
3300027568\|Ga0208042_1033745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1318	Open in IMG/M
3300027842\|Ga0209580_10258086	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300027908\|Ga0209006_11059280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	642	Open in IMG/M
3300028379\|Ga0268266_12115604	Not Available	535	Open in IMG/M
3300028742\|Ga0302220_10323830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300028759\|Ga0302224_10040020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1741	Open in IMG/M
3300028775\|Ga0302231_10156604	All Organisms → cellular organisms → Bacteria → Terrabacteria group	951	Open in IMG/M
3300028789\|Ga0302232_10519244	Not Available	585	Open in IMG/M
3300029882\|Ga0311368_10011880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8752	Open in IMG/M
3300029882\|Ga0311368_10332495	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300029951\|Ga0311371_10107133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4425	Open in IMG/M
3300030013\|Ga0302178_10268472	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300030054\|Ga0302182_10226276	Not Available	796	Open in IMG/M
3300030399\|Ga0311353_10026000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	6307	Open in IMG/M
3300030520\|Ga0311372_12622490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300030520\|Ga0311372_12640242	Not Available	558	Open in IMG/M
3300030580\|Ga0311355_10574713	Not Available	1068	Open in IMG/M
3300030707\|Ga0310038_10305313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	716	Open in IMG/M
3300031469\|Ga0170819_11884698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	503	Open in IMG/M
3300031525\|Ga0302326_13680309	Not Available	505	Open in IMG/M
3300031708\|Ga0310686_107546615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300031740\|Ga0307468_101066742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	717	Open in IMG/M
3300031740\|Ga0307468_102265274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300031754\|Ga0307475_10966322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	671	Open in IMG/M
3300031823\|Ga0307478_10993196	Not Available	701	Open in IMG/M
3300031891\|Ga0316039_106657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300032119\|Ga0316051_1017531	Not Available	639	Open in IMG/M
3300032160\|Ga0311301_11197788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	974	Open in IMG/M
3300032160\|Ga0311301_12030943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 846.5	669	Open in IMG/M
3300032828\|Ga0335080_11295002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	728	Open in IMG/M
3300033887\|Ga0334790_078484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1125	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.75%
Host-Associated	Host-Associated	6.25%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.57%
Aquatic	Environmental → Aquatic	15.18%
Plants	Host-Associated → Plants	6.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.18%
Freshwater	Environmental → Aquatic → Freshwater	13.39%
Peat	Environmental → Terrestrial → Peat	13.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.25%
Sediment	Environmental → Aquatic → Sediment	1.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.75%
Loam	Environmental → Terrestrial → Soil → Loam	17.86%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.39%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	13.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.64%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	13.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.04%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.14%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.79%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.18%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	12.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.93%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.14%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.57%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.57%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.79%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.79%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.79%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004477	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 65 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004478	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004964	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 77 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300019165	Soil microbial communities from Bohemian Forest, Czech Republic ? CSA1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019176	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019185	Soil microbial communities from Bohemian Forest, Czech Republic ? CSE2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019187	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023658	Soil microbial communities from Bohemian Forest, Czech Republic ? CSA3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023677	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSU5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027058	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027158	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028742	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_3	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031891	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLA3 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032119	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26339J46600_101353272	3300003218	Bog Forest Soil	MDNAARTRQRVLAVFLPVTAVLYISAEALSPKGTDQVVSTTATAL
Ga0062387_1013466562	3300004091	Bog Forest Soil	MDNAARARRRVLALFLPIAAVLYISAEALSPKGTDQVVTDTATALKLLAIAAKHPTQLYIAGTC
Ga0058901_15599411	3300004120	Forest Soil	MDNAARTRQRVLAIFLPVTAMLYISAAALSPKGTDQVISTTATALKVLPIAARHPAQLY
Ga0062386_1016955401	3300004152	Bog Forest Soil	MDSAARMRQRVLALFLPLTAVLYICAEGFNPKGTDKVIGTAADAFKE
Ga0068971_15630221	3300004477	Peatlands Soil	MDNAARTRQRVLAIFLPVTAVLYISAEALSPKGTDQVISTTATALKVLP
Ga0068972_10120571	3300004478	Peatlands Soil	MDNAARTRQRVLAIFLPVTAVLYISAEALSPKGTDQVISTTATALKVLPIAARHPA
Ga0058899_101529311	3300004631	Forest Soil	MDNVARTRQRVLAIFLPVTAVLYISAEALSPKGTDQVISTTATALKVLPIAARHPA
Ga0062388_1008851311	3300004635	Bog Forest Soil	VLALFLPVAAVLYISAEALSPKGTDQVITTTATALKVLPIAAKHPTQLYASGSLAILALG
Ga0072331_11799622	3300004964	Peatlands Soil	MDNAARTRQRVLAVFLPVTAVFYIGAEALSPKGTDQVISTTATA
Ga0070713_1003001471	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VLALFLPIAAVLYISAEALSLKGTDQVITTTATALKVLPIAAKHPTQLYVA
Ga0070708_1017771732	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDHAARARQRVLALFLPIAAALYMGAAALNPKGTDQVIQTTATALKVLPIA
Ga0070684_1012437372	3300005535	Corn Rhizosphere	MDNAARTRQRVLALFLPIAAVLYISAEALSPKGTDQVITTTATALNVLSI
Ga0070693_1006131941	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MDNAARTRQRVLALFLPIAAVLYISAEALSPKGTDQVITTTATALNVL
Ga0070717_106037882	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDNAARTRQRVLALFLPLVAVLYISAEALSPKGTDQVIQTTATAFKVLAIAAKH
Ga0070717_117251142	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MDNAARTRQRVLALFLPIAAVLYISAEALSPKGTDQVIQTTATAFKVLAIAAKHP
Ga0075015_1002459392	3300006102	Watersheds	MDNAARTRQRVLALFLPIAAVLYISAEALSPKGTDQVATDTATALKLLA
Ga0075014_1004411462	3300006174	Watersheds	MDKAARTRQRVLALFLPIAAALYIGAEALNPKGTDQVIPTTATALKVLPI
Ga0075425_1010344411	3300006854	Populus Rhizosphere	MDNATRTRQRVLALFLPIAAVLYISAEALSPKGTDQVIQTTATAFKVLAIAAKHPTQLYV
Ga0075425_1027642781	3300006854	Populus Rhizosphere	MDNAARTRQRVLALFLPIAAALYISAEALSPKGTDQVIQTTATAFKVLAIAAKHPTQLYV
Ga0075423_112853282	3300009162	Populus Rhizosphere	VLALFLPLVAVLYISAEALSPKGTDQVIQTTATAFKVLAIAA
Ga0075423_119559691	3300009162	Populus Rhizosphere	MDNAARTRQRVLALFLPIAAAFYISAEALSPKGTDQVIQTTATAFKVLAIAAKHPTQLYVGGS
Ga0105241_109214883	3300009174	Corn Rhizosphere	MDNAARTRQRVLALFLPIAAVLYISAEALSPKGTDQVIQTTATAFKVLAIA
Ga0116214_12152442	3300009520	Peatlands Soil	MFLPIAAVLYISAEALSPKGTDQVVTDTATALKLLA
Ga0116114_11650891	3300009630	Peatland	MDNAARARERVLAIFLPVAAALYIGAEGLNPKGTDQVITTTATAFRVLPIAAKHPAQLYLSGS
Ga0116217_102417622	3300009700	Peatlands Soil	MDKTARSRQRVLAMFLPIAAVLYISAEALSPKGTDQVVTDTATALKLLAC*
Ga0116223_103018281	3300009839	Peatlands Soil	MDNAARTRQRVLAVFLPVTAVFYIGAEALSPKGTDQVISTTATALKVLPIAA*
Ga0134125_124579962	3300010371	Terrestrial Soil	VLALFLPLVAVLYISAEALSPKGTDQVIQTTATALKVLAIAA
Ga0134128_100710016	3300010373	Terrestrial Soil	VLALFLPLVAVLYISAEALSPKGTDQVIQTTATAFKVLAIAAK
Ga0134126_112183112	3300010396	Terrestrial Soil	VLALFLPLVAVLYISAEALSPKGTDQVIQTTATAFKVLAIAAKHPA
Ga0126361_104961432	3300010876	Boreal Forest Soil	MDNAARTRQRVLAIFLPIAAVLYISAEALSPRGTDQVATDTATALKLLAIAAKNPTQIYVAGTCA
Ga0150983_155622021	3300011120	Forest Soil	VLAVFLPVTAVFYISGGALSPKGTDRVITTTATALKLLPIATRN
Ga0182016_104496941	3300014493	Bog	VLAIFLPVAAVLYISAEALSPKGTDQVISTTATALKVLPIAARHPAKLYVAGSLAL
Ga0182030_113697911	3300014838	Bog	MPAGNAARVRQRILAIFLPVTAVLYVSCEALDPKGTDQVVTTVAGGLKLLAIAAKHPTQ
Ga0187812_10362362	3300017821	Freshwater Sediment	MDNASRARQRVLALFLPIAAVLYIGGEALSPKGTDQMVTTTATALKVLPIAAQHPT
Ga0187807_11588632	3300017926	Freshwater Sediment	MDNATRTRLRVLALFLPIAAVLYISAEALSPKGTDQVATDTATALKLLGIAAQHPAQLYAAGTC
Ga0187814_102489871	3300017932	Freshwater Sediment	MDNAARTRQRVLAIFLPVTAVLYISAGALSPKGTDQVISTTATALKVLPIAARHPAQLYV
Ga0187814_103744971	3300017932	Freshwater Sediment	MDNTARARQRVLALFLPIAALLYISAEGLDPKGTDQLVQTTATALKELPIAAKHTVQL
Ga0187808_102540151	3300017942	Freshwater Sediment	MDNAARARQRVLALFLPIAAVLYISAEALSPKGTDQVITTTATALKVLPI
Ga0187879_103412771	3300017946	Peatland	MDHAARIRQRVLALFLPVAAVLYVSAEAVNPRGTDKIIQTRATALQVL
Ga0187815_105409152	3300018001	Freshwater Sediment	MDNAARTRQRVLAIFLPVAAVLYISAEALSPKGTDQVATDTATALELLAIAAK
Ga0187805_106120211	3300018007	Freshwater Sediment	MDNAARARRRVLAIFLPVAAVLYISAEALSPKGTDQVATDTATALKLLAIAAKHPTQLY
Ga0187805_106228711	3300018007	Freshwater Sediment	VGNAARVRQRILAIFLPVTAVLYVSCEALDPKGTDQVVTTVAAGLKLLGIAAK
Ga0187875_106218902	3300018035	Peatland	MDNAARARQRVLAIFLPIAAVLYVSAEALSPKGTDQVATDTATAFKLLAIAVK
Ga0187765_111550851	3300018060	Tropical Peatland	MDNAARIRQRVLALFLPVAAVLYIGGEALSPKGTDQVITTTATAFKVLPIAAQHPAQLYLASSLVL
Ga0184589_1001481	3300019165	Soil	MDSAARTRQRVLAVFLPVTAVLYISAEALSPKGTDQVTSTTATALKVL
Ga0184596_1211921	3300019176	Soil	MDNAARTRQRVLAIFLPATAVLYISAEALSPKGTDQVISTTATALKV
Ga0184587_1165941	3300019185	Soil	MDNAARTRQRVLAIFLPVTAVLYISAEALSPKGTDQVISTAATALKVLPIAAR
Ga0184584_1366271	3300019187	Soil	MDNAARTRQRVLAIFLPVTAVLYISAEALSPKGTDQVISTTATALKVLPIAARHPAQL
Ga0210399_109646462	3300020581	Soil	MDNAARARQRVLALFLPAAAVLYVSARALNPQGTDRLLTSMAAAFTVLPIAARHPRWP
Ga0210401_113318091	3300020583	Soil	MDNAARARRRVLALFLPVAAVLYISAEAVSPKGTDKVASDTASA
Ga0210396_111874301	3300021180	Soil	MTNAARARLRLLAGFLPVTAVLYVGAEALNPRGTDQVITTTAVAA
Ga0210393_109341401	3300021401	Soil	MDNAARTRQRVLALFLPIAAVLYISAEALSPKGTDQVITTTATALKVLPIAANHPTQL
Ga0210389_106904931	3300021404	Soil	MGNAARARQRVLAIFLPVTAALYIGAEGLNPKGTDQVIQSTATAFKVLPI
Ga0210386_110564382	3300021406	Soil	MDNAARARRRVLALFLPVAAVLYISAEAVSPKGTDKVASDTASALNLLAIAAKHPGT
Ga0210383_100278893	3300021407	Soil	MDNAARARQRVLALFLPAAAVLYVSARALNPQGTDRLLTSMAAAFTVLPIAARHPRWPRARG
Ga0210383_107139101	3300021407	Soil	MDNAARTRQRVLALFLPIAAVLYISAEALSPKGTDQVITTTATALKVLPI
Ga0210383_107757721	3300021407	Soil	MTNAVRARLRLLAGFLPVTAVLYVGAEALNPRGTDQVITTTAVAARLLPIAAAHPAPR
Ga0210390_102382361	3300021474	Soil	MDNAGRIRQRVLALFLPIAAVLYIGGEAVSPKGTDQVVTTTAVAFKVLPIAA
Ga0210390_107657852	3300021474	Soil	MDNAGRARQRVLALFLPVAAVLYVSAEALNPKGTDRVITSMTVAFTVLPIAARHPAQLYVSGSLSIL
Ga0210392_104040381	3300021475	Soil	MDNASRARRRVLALFLPVAAVLYISAEAVSPQGTDKVASDTASALNLLAIAAKHPAQVYAAGTFAVL
Ga0210392_105853502	3300021475	Soil	MGNAAQVRQRVLALFLPVAAAAYIGGEAVSPKGTDQVVSNTATAFKVLPIAAQH
Ga0210398_113832581	3300021477	Soil	MDNAARTRQRVLALFLPIAAVLYISAEALSPKGTDQVATDTATALKLTAIAAKHPTQLYV
Ga0210402_100222901	3300021478	Soil	MDNAGRARQRVLALFLPIAAVLYISAEALSPKGTDQVITTTGTALNVLSIAARHP
Ga0210409_117187661	3300021559	Soil	MDNAARTRQRVLALFLPIAAVLYISAEALSPKGTDQVIQTTATAFKVLAIAAKHPTQL
Ga0242670_10640981	3300022708	Soil	MDNAARARQRVLAIFLPVTAALYIGAEGLNPKGTDQVIQSTATAFKVLPIAASHPTQLYV
Ga0184591_1044051	3300023658	Soil	MDNAARTRQRVLAIFIPVTAVLYISAEALSPKGTDQVISTTATALKVL
Ga0247543_1036631	3300023677	Soil	MDNAARTRQRVLAIFLPVTAVLYISAEALSPKGTDQVISTTATALKVLPIAARHPAQLYVAGSLA
Ga0208586_10952522	3300025588	Arctic Peat Soil	MDNAARIRQRVLALFLPIAAVLYIGGEALSPKGTDQVLSTTATAFKVLPIAAQHPAQLYLAKDLQ
Ga0208480_10834312	3300025633	Arctic Peat Soil	MNNAARIRLRLLAGFLPVTAVLYVGAEALNPRGTDQVITSTATAFKVLPVAAS
Ga0207685_103575332	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MDNAARTRQRVLALFLPIAAVLYISAEALSPKGTDQVIQTTATAF
Ga0207699_106763091	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSHLDNWDRSMDNAARSRQRVLALFLPIAAALYIGAAALNPKGTDQVIQTT
Ga0207654_110552912	3300025911	Corn Rhizosphere	MDNAARTRQRVLALFLPIAAVLYISAEALSPKGTDQVIQTTATAFKVLAIAAKHPA
Ga0207693_100770891	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MDNAARTRQRVLALFLPIAAMLYISAEALSPKGTDQVIQTTATA
Ga0207693_109666552	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MDNTARTRQRVLALFLPVAAVLYISAEALSPKGTDQVVTTTATAFKVLPIAAQHSTQL
Ga0207700_108018611	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MDNAARARQRVLALFLPIAAALYMGAAALNPKGTDQVIQTTATALKVLPIAASHP
Ga0209111_10231372	3300027058	Forest Soil	VNNVTRIRMRVLALFLPIAAVLYISAEALSPKGTDQVATDTATALKLLAIAAKHPA
Ga0208099_10233743	3300027096	Forest Soil	MHNAALIRLRVLAVFLPVTAVLYIGGEALSPKGTDQVVDTAATAFKVLPIAA
Ga0208488_10619492	3300027110	Forest Soil	MNSAVRSRQRVLALFLPIAAVLYIGGEALSPRGTDQVVTTTAVAFKVLPIAAQHP
Ga0208725_10566611	3300027158	Forest Soil	MDHAVRIRQQALAVSLPLAAVLYVSGEAVSPKGTDQLITTTAVAFKVLPVAAAHSGQLYA
Ga0208042_10337451	3300027568	Peatlands Soil	MDNAARTRQRVLAIFLPVTAVLYISAEALSPKGTDQVISTTATALKVLPIAARHPAQLYVAGS
Ga0209580_102580863	3300027842	Surface Soil	MDNVAPTRQRVLALFLPIAAVLYISAEALSPKGTDQVITTTATALK
Ga0209693_103122751	3300027855	Soil	MDNAARTRQRALAIFLPVTAVLYISAAALSPKGTDQVISTTATALK
Ga0209006_110592802	3300027908	Forest Soil	MEHAARIRQRILALSLPLTALLYVGTEALNPKGTDQVIQTMADAL
Ga0268266_121156041	3300028379	Switchgrass Rhizosphere	MDNAARTRQRVLALFLPIAAAFYISAEALSPKGTDQVIQTMATAFK
Ga0302220_103238302	3300028742	Palsa	SMDKPSRVRLRVLTLFLPLTTALYIGAEALNPKGTDQVINTHGGRVPR
Ga0302224_100400203	3300028759	Palsa	MDKPSRVRLRVLTLFLPLTTALYIGAEALNPKGTDQVINTHGGRVPR
Ga0302231_101566041	3300028775	Palsa	MDNAARARQRLLAVFLPITAVLYISAEALDPQGTDRVINTTAVAFKVLPIAARHSAQLY
Ga0302232_105192442	3300028789	Palsa	MDHAARMRQRVLALFLPVAAVLYVSAEAVDPRGTDRIIQTKAAALQVLPI
Ga0311368_1001188012	3300029882	Palsa	MDKPSAARLRVLALFLPRATALYIGAEALNPKGTDQVINTHGGRVPR
Ga0311368_103324952	3300029882	Palsa	MDNASRTRRRVLALFLPVAAVLYIGGEAVSPKGTDQVVTTTAVAFKVLPI
Ga0311371_101071331	3300029951	Palsa	MDNAARTRRRVLALFLPVAAVLYIGGEAVSPKGTDQLVTTAAAAYKVLPIAGQHQT
Ga0302178_102684722	3300030013	Palsa	MDNAARTRRRVLALFLPVAAVLYIGGEAVSPKGTDQVVTTAAVAFKVLPIAAQ
Ga0302182_102262762	3300030054	Palsa	MDNAARARQRLLAVFLPITAVLYISAEALDPQGTDRVINTTAVAF
Ga0311353_100260001	3300030399	Palsa	MDNAARARQRLLAVFLPITAVLYISAEALDPQGTDRVINTTAVAFKVLPIAARHSAQLYVSGSL
Ga0311372_126224901	3300030520	Palsa	MDKPSAARLRVLALFLPRATALYIGAEALNPKGTDQLINTTAA
Ga0311372_126402421	3300030520	Palsa	MDNAARARQRVLALFLPVAAVLYISAEAVSPKGTDQVATDTATALKLLAIAAKH
Ga0311355_105747131	3300030580	Palsa	MDNAVRTRQRVLALFLPVAAVLYIGGEALSPKGTDQVLTTTAVALKVLPIAAQHP
Ga0310038_103053131	3300030707	Peatlands Soil	MDNAARARQWVLAIFLPIAAVLYISAEALSPKGTDQVATDTATALKLLAIA
Ga0265760_101842031	3300031090	Soil	MDNAARTRQRVLAIFLPVTALLYIEGEALSPKGTDQVITTTATA
Ga0170819_118846982	3300031469	Forest Soil	MDNAARMRQRVLALFLPLAAVLYVSAEALNPKGTDKIISTTADALKEERSGMRK
Ga0302326_136803091	3300031525	Palsa	MDNAARARQRVLALFLPVAAVLYISAEAVSPKGTDQVATDTATALKLLAIAA
Ga0310686_1075466152	3300031708	Soil	MDNAARTRRRVLALFLPVAAVLYIGGEALSPKGTDQEVTTTAVAFKVLPIAAQHQAQLYLASALV
Ga0307468_1010667421	3300031740	Hardwood Forest Soil	MDNAARTRQRVLALFLPIAAALYISAEALSPKGTDQVIQTTATAFKVLAIAAKHPTQLYVAGSL
Ga0307468_1022652741	3300031740	Hardwood Forest Soil	MDNAARTRQRVLALFLPIAAVLYISAEALSPKGTDQVIQTTATAFKVLAIAAK
Ga0307475_109663222	3300031754	Hardwood Forest Soil	MDNAARTRQRVLALFLPIAAVLYISAEALSPKGTDQVITTTATALKVLPIA
Ga0307478_109931961	3300031823	Hardwood Forest Soil	MDNTARTRQRVLALFLPIAAVLYISAEALSPKGTDQVVTDTATALKLLAIAA
Ga0316039_1066571	3300031891	Soil	MDNAARTRQRVLAIFLPVTAVLYMSAEALSPKGTDQVISTTATALKV
Ga0316051_10175311	3300032119	Soil	MDNAARTRQRVLAIFLPVTAVLYISTEALSPKGTDQVISTTGTALKVLPSRPD
Ga0311301_111977881	3300032160	Peatlands Soil	MDKAARTRQRVLALFLPIAAALYISAEAISPKGTDQVVTDTATALKLLAIAAKHPAQLYVAG
Ga0311301_120309431	3300032160	Peatlands Soil	MDKTARSRQRVLAMFLPIAAVLYISAEALSPKGTDQVVTDTATALKLLAC
Ga0335080_112950021	3300032828	Soil	MANAARARQRVLAAFLPITAVLYVSAEALDPRGTDQVITTTAAAFRLLP
Ga0334790_078484_3_182	3300033887	Soil	LLAIWLPITALLYMSTELLNPKGTDQLITTTAAALKVLPIAAKHSSQLYLSGSISEVALA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084574

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences