Metagenome / Metatranscriptome Family F084567

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084567
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	73 residues
Representative Sequence	MASIEQDLMVMLQQLPIPITITWQSNRYHWQCIDGHGSSTDLVEATGQGLKYLIASLKTDTSRLTENKSGSTT
Number of Associated Samples	80
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.18 %
% of genes near scaffold ends (potentially truncated)	19.64 %
% of genes from short scaffolds (< 2000 bps)	83.93 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (70.536 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (25.893 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.679 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.59% β-sheet: 11.88% Coil/Unstructured: 47.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01966	HD	12.50
PF00534	Glycos_transf_1	12.50
PF02746	MR_MLE_N	6.25
PF13378	MR_MLE_C	4.46
PF13263	PHP_C	4.46
PF13439	Glyco_transf_4	3.57
PF05368	NmrA	1.79
PF02517	Rce1-like	1.79
PF04075	F420H2_quin_red	1.79
PF13451	zf-trcl	0.89
PF00501	AMP-binding	0.89
PF03636	Glyco_hydro_65N	0.89
PF07385	Lyx_isomer	0.89
PF13343	SBP_bac_6	0.89
PF01243	Putative_PNPOx	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	12.50
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	1.79
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	1.79
COG1554	Phosphatase/phosphodiesterase/kojibiose phosphorylase YcjT/PafA/Npp1, AlkP superfamily	Carbohydrate transport and metabolism [G]	0.89
COG3822	D-lyxose ketol-isomerase	Carbohydrate transport and metabolism [G]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.54 %
Unclassified	root	N/A	29.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.54 %
Unclassified	root	N/A	29.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.54 %
Unclassified	root	N/A	29.46 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	63.39 %
Unclassified	root	N/A	29.46 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	60.71 %
Unclassified	root	N/A	29.46 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	29.46 %
Unclassified	root	N/A	29.46 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	11.61 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.89 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	29.46 %
Unclassified	root	N/A	29.46 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	10.71 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.89 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	29.46 %
Unclassified	root	N/A	29.46 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	10.71 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	29.46 %
Unclassified	root	N/A	29.46 %
unclassified Ktedonobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae	8.93 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	1.79 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	0.89 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	29.46 %
Unclassified	root	N/A	29.46 %
Ktedonobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	8.93 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	1.79 %
Clostridium botulinum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium botulinum	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003861\|Ga0031654_10073700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	953	Open in IMG/M
3300005177\|Ga0066690_10267852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1149	Open in IMG/M
3300005181\|Ga0066678_10245183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1157	Open in IMG/M
3300005186\|Ga0066676_10770663	Not Available	653	Open in IMG/M
3300005451\|Ga0066681_10430101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	810	Open in IMG/M
3300005471\|Ga0070698_101368861	Not Available	658	Open in IMG/M
3300005556\|Ga0066707_10485823	Not Available	801	Open in IMG/M
3300005560\|Ga0066670_10487785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	758	Open in IMG/M
3300005587\|Ga0066654_10115645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1319	Open in IMG/M
3300005587\|Ga0066654_10382401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	767	Open in IMG/M
3300005598\|Ga0066706_11296719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	551	Open in IMG/M
3300005764\|Ga0066903_106381533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	615	Open in IMG/M
3300006046\|Ga0066652_101000915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	793	Open in IMG/M
3300006047\|Ga0075024_100746142	Not Available	542	Open in IMG/M
3300006050\|Ga0075028_100048427	Not Available	2033	Open in IMG/M
3300006050\|Ga0075028_100322899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	865	Open in IMG/M
3300006052\|Ga0075029_100526534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	783	Open in IMG/M
3300006052\|Ga0075029_101335717	Not Available	504	Open in IMG/M
3300006059\|Ga0075017_100333479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	1127	Open in IMG/M
3300006059\|Ga0075017_100524153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	901	Open in IMG/M
3300006174\|Ga0075014_100793417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	559	Open in IMG/M
3300006354\|Ga0075021_11021573	Not Available	540	Open in IMG/M
3300006354\|Ga0075021_11188784	All Organisms → cellular organisms → Bacteria → Terrabacteria group	501	Open in IMG/M
3300006796\|Ga0066665_10068258	All Organisms → cellular organisms → Bacteria	2515	Open in IMG/M
3300006800\|Ga0066660_11543537	Not Available	524	Open in IMG/M
3300009012\|Ga0066710_101438286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1067	Open in IMG/M
3300009038\|Ga0099829_10060818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2832	Open in IMG/M
3300009089\|Ga0099828_10285607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1483	Open in IMG/M
3300009137\|Ga0066709_101476565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	983	Open in IMG/M
3300009698\|Ga0116216_10892550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	532	Open in IMG/M
3300009700\|Ga0116217_10128110	All Organisms → cellular organisms → Bacteria	1712	Open in IMG/M
3300009700\|Ga0116217_10334791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	968	Open in IMG/M
3300009700\|Ga0116217_10761452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	597	Open in IMG/M
3300010048\|Ga0126373_10120275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2455	Open in IMG/M
3300010048\|Ga0126373_12618117	Not Available	562	Open in IMG/M
3300010154\|Ga0127503_11328917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	667	Open in IMG/M
3300010303\|Ga0134082_10511433	Not Available	525	Open in IMG/M
3300010358\|Ga0126370_10630821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	930	Open in IMG/M
3300010361\|Ga0126378_12723440	Not Available	565	Open in IMG/M
3300010379\|Ga0136449_100069757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	7557	Open in IMG/M
3300010379\|Ga0136449_103396990	Not Available	609	Open in IMG/M
3300010379\|Ga0136449_103639970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	584	Open in IMG/M
3300010379\|Ga0136449_104105170	Not Available	542	Open in IMG/M
3300010398\|Ga0126383_11727670	Not Available	714	Open in IMG/M
3300011269\|Ga0137392_10114313	All Organisms → cellular organisms → Bacteria	2144	Open in IMG/M
3300012096\|Ga0137389_11184698	Not Available	654	Open in IMG/M
3300012198\|Ga0137364_10112765	Not Available	1929	Open in IMG/M
3300012198\|Ga0137364_10336668	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300012198\|Ga0137364_10476966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	937	Open in IMG/M
3300012199\|Ga0137383_10367212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1054	Open in IMG/M
3300012201\|Ga0137365_10050943	All Organisms → cellular organisms → Bacteria	3135	Open in IMG/M
3300012201\|Ga0137365_11053485	Not Available	588	Open in IMG/M
3300012201\|Ga0137365_11276054	Not Available	522	Open in IMG/M
3300012202\|Ga0137363_10387570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1162	Open in IMG/M
3300012206\|Ga0137380_11479672	Not Available	564	Open in IMG/M
3300012207\|Ga0137381_10290890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1422	Open in IMG/M
3300012207\|Ga0137381_10879364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	775	Open in IMG/M
3300012207\|Ga0137381_11586154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	546	Open in IMG/M
3300012208\|Ga0137376_10746034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	844	Open in IMG/M
3300012208\|Ga0137376_11157011	Not Available	661	Open in IMG/M
3300012211\|Ga0137377_10659645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	982	Open in IMG/M
3300012285\|Ga0137370_10927019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	538	Open in IMG/M
3300012350\|Ga0137372_10529335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	873	Open in IMG/M
3300012357\|Ga0137384_10132317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2088	Open in IMG/M
3300012357\|Ga0137384_10261860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1442	Open in IMG/M
3300012357\|Ga0137384_10308601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1315	Open in IMG/M
3300012359\|Ga0137385_10455057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1086	Open in IMG/M
3300012361\|Ga0137360_10260885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1427	Open in IMG/M
3300012386\|Ga0134046_1243533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	564	Open in IMG/M
3300012971\|Ga0126369_10289321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1634	Open in IMG/M
3300012971\|Ga0126369_13715946	Not Available	500	Open in IMG/M
3300016319\|Ga0182033_11844184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	549	Open in IMG/M
3300017821\|Ga0187812_1006472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4046	Open in IMG/M
3300017823\|Ga0187818_10187828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	902	Open in IMG/M
3300017959\|Ga0187779_10118404	Not Available	1610	Open in IMG/M
3300017959\|Ga0187779_11374537	Not Available	502	Open in IMG/M
3300017973\|Ga0187780_10300114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	1129	Open in IMG/M
3300017974\|Ga0187777_10015337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	4853	Open in IMG/M
3300018058\|Ga0187766_10033744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2976	Open in IMG/M
3300018433\|Ga0066667_10319054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1219	Open in IMG/M
3300018482\|Ga0066669_10530115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1023	Open in IMG/M
3300020581\|Ga0210399_10191792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1698	Open in IMG/M
3300020581\|Ga0210399_10363501	Not Available	1208	Open in IMG/M
3300021086\|Ga0179596_10353810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	738	Open in IMG/M
3300021088\|Ga0210404_10458165	Not Available	718	Open in IMG/M
3300021478\|Ga0210402_10170387	Not Available	1991	Open in IMG/M
3300021559\|Ga0210409_10190106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1872	Open in IMG/M
3300025915\|Ga0207693_10589003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	866	Open in IMG/M
3300026319\|Ga0209647_1015678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4873	Open in IMG/M
3300026538\|Ga0209056_10048582	All Organisms → cellular organisms → Bacteria	3818	Open in IMG/M
3300026551\|Ga0209648_10341446	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300026551\|Ga0209648_10820826	Not Available	508	Open in IMG/M
3300027497\|Ga0208199_1021279	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300027667\|Ga0209009_1026743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1414	Open in IMG/M
3300027882\|Ga0209590_10522657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	766	Open in IMG/M
3300027894\|Ga0209068_10271945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → Clostridium botulinum	946	Open in IMG/M
3300027894\|Ga0209068_10626641	Not Available	627	Open in IMG/M
3300027902\|Ga0209048_10002750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	17291	Open in IMG/M
3300027902\|Ga0209048_10154840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1706	Open in IMG/M
3300027911\|Ga0209698_10243049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1440	Open in IMG/M
3300027911\|Ga0209698_10717689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	760	Open in IMG/M
3300027911\|Ga0209698_11192301	Not Available	561	Open in IMG/M
3300027915\|Ga0209069_10540983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	662	Open in IMG/M
3300030494\|Ga0310037_10426572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	546	Open in IMG/M
3300032160\|Ga0311301_10103461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	5543	Open in IMG/M
3300032160\|Ga0311301_10128683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4720	Open in IMG/M
3300032160\|Ga0311301_11952295	All Organisms → cellular organisms → Bacteria → Terrabacteria group	688	Open in IMG/M
3300032160\|Ga0311301_12530198	Not Available	573	Open in IMG/M
3300032261\|Ga0306920_102515202	Not Available	708	Open in IMG/M
3300033806\|Ga0314865_156258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	608	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.46%
Aquatic	Environmental → Aquatic	20.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	79.46%
Sediment	Environmental → Aquatic → Sediment	15.18%
Freshwater	Environmental → Aquatic → Freshwater	5.36%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	15.18%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.36%
Loam	Environmental → Terrestrial → Soil → Loam	3.57%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.79%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	15.18%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.25%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.36%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.00%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	15.18%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	12.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.46%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.46%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.79%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.89%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012386	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033806	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0031654_100737002	3300003861	Freshwater Lake Sediment	MASIEQELMVMLQNLPVPITITWQSNRYHWQCIDGHGSSNDLVEATGQGLNYLITYLQTDSHGLTEKKSSSMA*
Ga0066690_102678521	3300005177	Soil	MASIEQDLMVMLQHLPIPITITWQSNRYHWQCVDGHGSSPDLVEATEQGLTYLIATLKSNTSRLTENNRGSTA*
Ga0066678_102451832	3300005181	Soil	MASIEQDLMVMLQHLPIPITITWQSNRYHWQCVEGHGSSPDLVEATEQGLTYLIATLKSNTSRLTENNRGSTA*
Ga0066676_107706631	3300005186	Soil	MASIEQDLMVMLRQLPIPITITWQNNRYHWQCVESFGSSPDLVEAVGQALKYLIAFLAPDTSRMTNISHESAV*
Ga0066681_104301012	3300005451	Soil	MASIEQDLMVMLQHLPIPIIITWQSNRYHWQCVDGQGSSTDLVEATEQSLNYLIASLKTNTNRLTENKSGSHHAN*
Ga0070698_1013688611	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTNIEQDFIVMLRQLPIAITITWQNSRYHWQCAGGKDASSDLVEAVKQALQHLMACLAPDTSRATDNSRAHLTS*
Ga0066707_104858232	3300005556	Soil	MASIEQDLMVMLQQLPIPITITWQSNRYHWQCIDGHGSSTDLVEATGQGLKYLIASLKTDTSRFTENNRGSTT*
Ga0066670_104877852	3300005560	Soil	MASIEQELMVMLQHLSIPITITWQSNRYYWQCIDGHGSSTDLVEATGQAPKYLIKSLKTDSSRLTENKGGSTT*
Ga0066654_101156452	3300005587	Soil	MASIEQDLMVMLQHLPIPITITWQSNRYYWKCIDGHGSSNDLVEATGQSLNYLIASLKTDLGRLSENKSGSIAQK*
Ga0066654_103824012	3300005587	Soil	MASIEQDLMVMLQHLPIPIIITWQSNRYHWQCVDGQGSSTDLVEATEQSLNYLIASLKTDTNRLTENKSGSHHAN*
Ga0066706_112967191	3300005598	Soil	MASIEQDLMVMLQHLPIPITITWQSNRYHWQCVYGQGSSTDLVEATGQSLNYLIASLKTDTSRLTENKSGSHYAD*
Ga0066903_1063815332	3300005764	Tropical Forest Soil	EQELMIMLKQLPVPITVTWQSNRYHWLCLDGHGSSNDLVEATGQALNYMITSLKAEGSTLTENKSGTTA*
Ga0066652_1010009152	3300006046	Soil	MASIEQDLMVMLQQLPIPITITWQSNRYHWQCIDGHSSSTDLVEATGQGLKYLITSLTTDTSRLTENKSGSTA*
Ga0075024_1007461422	3300006047	Watersheds	MASIEQDLMVMLRQLPVAITITWQSNRYHWQCVEGHGSSPDLVEATGQALKYLITLLATDTGTVANNRRGSTA*
Ga0075028_1000484272	3300006050	Watersheds	MASIEQNLMVMLQHLPIPIIITWQSNRYHWQCIDGHGSSNNLVESTEQGLNYLIASLKADPERVIEKKSGSTA*
Ga0075028_1003228992	3300006050	Watersheds	MASIEQELMVMLQNLPVPITISWQSNRYHWQCIDRHGSSNDLVEAAGQGLNFLITYLQTDSHSLTEKKSGFTV*
Ga0075029_1005265342	3300006052	Watersheds	MASIEQDLMVMLQHLPVPITITWQSNRYYWQCIDGHGSSNNLVETTEQGLNYLIATFKTDPGRLTEKKSGSTA*
Ga0075029_1013357172	3300006052	Watersheds	MASIEQDLMVMLQHLPVPITITWQSNRYHWQCLDRHGSSNDLVESTRQGLNYLIASLKTDSRRLAENKS*
Ga0075017_1003334792	3300006059	Watersheds	MASTEQDLMVMLQHLPVPITITWQSNRYHWQCLDRHGSSNDLVESTRQGLNYLITSLKTDPGRLTQNKSGSMA*
Ga0075017_1005241531	3300006059	Watersheds	MASIEQDLMVMLQHLPIPITITWQSNRYHWQCVDGHGSSTDLVESTGQSLKYLIASLKTE
Ga0075014_1007934171	3300006174	Watersheds	ASIEQDLMVMLQHLPIPITITWQSNRYHWQCIDGHGSSNNLVETTEQGLNYLIASLKADSGRVTEKKSGSTA*
Ga0075021_110215731	3300006354	Watersheds	MESTEQDLMVMLQHLPVPITITWQSNRYHWQCLDRHGSSNDLVESTRQGLNYLIASLKTDPGRLTQNKSGSMA*
Ga0075021_111887842	3300006354	Watersheds	MASIEQDLMVMLRQLPVPITITWQSNRYHWQCVEGHGSSPNLVEASGQALKYLITSLATDISTVANNSREFTS*
Ga0066665_100682581	3300006796	Soil	MASIEQDLMVMLQHLPIPITITWQSNRYHWQCVDGHGSSPDLVEATGQGLKYLIASLKTDTSRFTENNRGSTT*
Ga0066665_116868652	3300006796	Soil	VPITITWQSNRYHWQCVEGHGSSPNLVEASGQALKYLITFLATDISTVANNSREFTAK*
Ga0066660_115435372	3300006800	Soil	MASIEQDLMVMLQHLPIPITITWQSNRYHWQCIDGHGSSNDLVEATREALNYLIEYLKTDSNRL
Ga0066710_1014382862	3300009012	Grasslands Soil	MASIEQDLMVMLQHLPIPIIITWQSNRYHWQCVYGQGSSTDLVEATGQSLNYLIASLKTDTSRLTENKSGSHYAD
Ga0099829_100608185	3300009038	Vadose Zone Soil	MASIEQDLMVMLRQLPVAITITWQSNRYHWQCVEGHGSSPDLVEATGQALKYLITFLATDTGTVANNRRGSTA*
Ga0099828_102856071	3300009089	Vadose Zone Soil	MASIEQDLMVMLRQLPVAITITWQSNRYHWQCVEDHGSSPDLVEATGQALKYLITFLATDTGTVANNRRG
Ga0066709_1014765652	3300009137	Grasslands Soil	MASIEQDLMVMLQQLPIPITITWQSNRYHWQCIDGHGSSTDLVEATGQGLKYLIASLKTDTSRLTENKSGSTT*
Ga0116216_108925501	3300009698	Peatlands Soil	IFYSKLRPGDVNMASIEQDLMVMLRQLPVPITITWQSNRYHWQCVEGHGSSTNLVEASEQALKYLITSLATDISTVANNSREFTS*
Ga0116217_101281101	3300009700	Peatlands Soil	EQDLMVMLQHLPVPITITWQSGRYHWQCLDGHGSSNDLVDATGQGLNYLIASLKTDRDSLTENKSGFPA*
Ga0116217_103347912	3300009700	Peatlands Soil	MASIEQDLMVMLQHLPIPITITWQSNRYYWQCIDGHGSSNNLVETTEQGWNYLIASLKADPGRITEKKSGSTA*
Ga0116217_107614521	3300009700	Peatlands Soil	MASIEQDLMVMLRQLPVPITITWQSNRYHWQCVEGHGSSTNLVEASEQALKYLITSLATDISTVANNSREFTS*
Ga0126373_101202754	3300010048	Tropical Forest Soil	MTSIEQDFMIMLRQLPIAITITWQNNRYHWQCAGGKGASSELVEAVKQALQHLMACLAPDTSRVTTAEHG*
Ga0126373_126181172	3300010048	Tropical Forest Soil	KGANMASIEQELMVMLQQLPVPITITWQNSQYHWQCVEGHGSSPDLVGATGQALRYLMTFLASDTSKITNISHESRAV*
Ga0127503_113289172	3300010154	Soil	MASIEQDLMVMLQHLPIPITITWQSNRYHWQCVDGHGSSTDLVEATEQGLNYLIASLKTDSSRLTENKSGSTA*
Ga0134082_105114331	3300010303	Grasslands Soil	MASIEQDLMVMLQHLPIPIIITWQSNRYHWQCVYGQGSSTDLVEATGQSLNYLIASLKTDTSRLTENK
Ga0126370_106308211	3300010358	Tropical Forest Soil	MASIEQELMIMLKQLPVPITVTWQSNRYHWQCLDGHGSSNDLVEATGQALNYMITSLKAEGSTLTENKSGTTA*
Ga0126378_127234402	3300010361	Tropical Forest Soil	MASIEQELMIMLKQLPVPITITWQSNRYHWECFDGHGSANDLVEATREGLNYMIASLQSDLSLVPENINGSKA*
Ga0136449_1000697575	3300010379	Peatlands Soil	MASIEQDLMVMLQHLPIPITITWQSNRYFWQCIDGHGSSNNLVETTEQGLNYLIASLKADPGRITEKKSGSTA*
Ga0136449_1033969901	3300010379	Peatlands Soil	MASIEQDLMVMLRQLPVPITITWQSNRYHWQCVEGQGSSTNLVEASEQALKYLITSLATDISTVANNSREFTS*
Ga0136449_1036399702	3300010379	Peatlands Soil	MASIEQELMVMLQNLPVPITITWQSNRYHWQCIDGHGSSNDLVETAGQGLNFLITSLQTDSHSLTEKKSSSMA*
Ga0136449_1041051702	3300010379	Peatlands Soil	MASIEQDLMVMLQQLPVPISITWQSNRYHWQCVEGHGSSSNLVEASGQALKYLITSLATDISTVANNSREFTS*
Ga0126383_117276701	3300010398	Tropical Forest Soil	GVSMTSIEQDFMIMLRQLPIAITITWQNNRYHWQCAGGKGASSELVEAVKQALQHLMACLAPDTSRVTTAEQV*
Ga0137392_101143132	3300011269	Vadose Zone Soil	MASIEQDLMVMLRQLPVAITITWQSNRYHWQCVEDHGSSPDLVEATGQALKYLITFLATDTGTVANNRRGSTA*
Ga0137389_111846982	3300012096	Vadose Zone Soil	VNMASIEQDLMVMLQHLPIPITITWQSNRYHWQCVDGHGSSTDLVEATEQSLKYLIASLKTATSRLTENKNGSTA*
Ga0137364_101127652	3300012198	Vadose Zone Soil	MASIEQDLMVMLQQLPIPITITWQSNRYHWQCIDGHGSSTDLVEATGQGLKYLITSLTTDTSRLTENKSGSTA*
Ga0137364_103366682	3300012198	Vadose Zone Soil	MASIEQDLMVMLRQLPVPITITWQSNRYHWQCVEGHGSSPNLVEASGQALKYLITFLATDISTVANNSREFTAK*
Ga0137364_104769662	3300012198	Vadose Zone Soil	MASIEQDLMVMLQHLPIPIIITWQSNRYQWQCVDGQGSSTDLVEATGQSLNYLIASLKTDINSLTENKSGSLYAD*
Ga0137383_103672122	3300012199	Vadose Zone Soil	MASIEQDLMVMLQHLPIPIIITWQSNRYQWQCVDGQGSSTDLVEATGQSLNYLIASLKTDMNRLTENKSGSLYAD*
Ga0137365_100509435	3300012201	Vadose Zone Soil	MASIEQDLMVMLRQLPIPITITWQNNRYHWQCVEGFCSSPDLVEAVGQALKYLIAFLAPDTSRMTNISHESAV*
Ga0137365_110534851	3300012201	Vadose Zone Soil	ENEGVNMASIEQELMVMLQHLSIPITITWQSNRYYWQCIDGHGSSTDLVEATGQAPKYLIKSLRTDSSRLTENKGGSTT*
Ga0137365_112760542	3300012201	Vadose Zone Soil	MSSIEQDLMVMLQHLPIPITITWKSNRYHWQCVDGHGSSPDLVEATEQGLTYLIATLKSNTSRLTENNRGSTA*
Ga0137363_103875702	3300012202	Vadose Zone Soil	MASIEQDLMVMLRQLPVAITITWQSNRYHWQCIEGHGSSPDLVEATGQALKYLITFLATDTGTVANNRRGSTA*
Ga0137380_114796721	3300012206	Vadose Zone Soil	MASIEQDLMVMLQHLPIPITITWKSNRYHWQCVDGHGSSPDLVEATGQGLTYLIATLKRNTSRLTENKSGSTT*
Ga0137381_102908901	3300012207	Vadose Zone Soil	MASIEQDLMVMLRQLPVPITITWQSNRYHWQCIDGHGSSTDLVEATGQGLKYLITSLTTDTSRLTENKSGSTA
Ga0137381_108793642	3300012207	Vadose Zone Soil	MASIEQDLMVMLRQLPIPITITWQNNRYHWQCVEGFGSSPDLVEAVGQALKYLIAFLAPDTSRMTNISHESAV*
Ga0137381_115861541	3300012207	Vadose Zone Soil	MASIEQDLMVMLQHLPIPITITWQSNRYHWQCVDGHGSSPDLVEATGQGLTYLIATLKSNTSRLTENKSGSTT*
Ga0137376_107460342	3300012208	Vadose Zone Soil	MASIEQELMVMLQHLSIPITITWQSNRYYWQCIDGHGSSTDLVEATGQAPKYLIKSLRTDSSRLTENKGGSTT*
Ga0137376_111570112	3300012208	Vadose Zone Soil	MASIEQDLMVMLQHLPIPIIITWQSNRYQWQCVDGQGSSTDLVEATGQCLNYLIASLKTDINSLTENKSGSLYAD*
Ga0137377_106596451	3300012211	Vadose Zone Soil	IEQDLMVMLQQLPIPITITWQSNRYHWQCIDGHSSSTDLVEATGQGLKYLITSLTTDTSRLTENKSGSTA*
Ga0137370_109270191	3300012285	Vadose Zone Soil	MASIEQDLMVMLQQLPIPITITWQSNRYHWQCVDGQGSSTDLVEATGQSLNYLIASLKTDTSRLTENKSGSHYAD*
Ga0137372_105293352	3300012350	Vadose Zone Soil	MASIEQDLMVMLRQLPIPITITWQNNRYHWQCVEGFCSSPDLVEAVGQALKYLMAFLAPDTSRMTNINHESAV*
Ga0137384_101323171	3300012357	Vadose Zone Soil	MASIEQDLMVMLQHLPIPIIITWQSNRYQWQCVDGQGSSTDLVEATGQSLNYLIASLKTDTNRLTENKSGSTA*
Ga0137384_102618601	3300012357	Vadose Zone Soil	QDLMVMLQQLPIPITITWQSNRYHWQCIDGHSSSTDLVEATGQGLKYLITSLTTDTSRLTENKSGSTA*
Ga0137384_103086013	3300012357	Vadose Zone Soil	MASIEQDLMVMLRQLPIPITITWQNNRYHWQCVEGFGSSPDLVEAVGQALKYLMAFLAPDTSRMTNINHESAV*
Ga0137385_104550572	3300012359	Vadose Zone Soil	MASIEQDLMVMLQHLPIPIIITWQSNRYQWQCVDGQGSSTDLVEATGQSLNYLIASLKTDMNKLTENKSGSFYAD*
Ga0137360_102608852	3300012361	Vadose Zone Soil	MASIEQDLMVMLRQLPVPITITWQSNRYHWQCVEGHGSSPNLVEATGQALKYLIAFLATDTGTVANNRRGSTA*
Ga0134046_12435332	3300012386	Grasslands Soil	MASIEQDLMVMLQHLPIPIIITWQSNRYQWQCVDGQGSSTDLVEATGQSLNYLIASLKTDINRLTENKSGSLYAD*
Ga0126369_102893212	3300012971	Tropical Forest Soil	MSSIEQDLMVMLQHLPIPIIITWQSNRYHWHCIDGHGSSNDLVEATGQSLKYLITSLKTDTSRLTENKSSLMD*
Ga0126369_137159461	3300012971	Tropical Forest Soil	MTSIEQDFMIMLRQLPIAITITWQNNRYHWQCAGGKGASSELVEAVKQALQHLMACLAPDTSRATTAEQV*
Ga0182033_118441842	3300016319	Soil	MASIEQDLMVMLQRLPIPITITWQSNRYHWECLDGHGSSNNLVEATGQGLNYLIASLKTDTSRSTENKSGFTAQK
Ga0187812_10064722	3300017821	Freshwater Sediment	MASIEQDLMVMLQHLPVPITITWQSNRYHWQCIDGHGSSNDLVEATGQGLKYLIASLKTDPGRLTENKSGFTA
Ga0187818_101878282	3300017823	Freshwater Sediment	MASIEQDLMVMLQHLPVPITITWQSNRYHWQCIDGHGSSNDLVEATGQGLKYLIASLKTDPGRLTGNKSGFTA
Ga0187779_101184042	3300017959	Tropical Peatland	MESIEQELMIMLKQLPVPITIIWQSNRYHWQCHDGHGSSNDLVEATRQALNYMIVSLETDSSLLPENINGSKP
Ga0187779_113745371	3300017959	Tropical Peatland	MESVEQELMIMLKHLPIPITITWLSNRYYWQCLDGHGSSNDLVEATGQGLNYLIALLQTDTSRSTENKSGSTA
Ga0187780_103001142	3300017973	Tropical Peatland	MESIEQELMIMLKQLPVPITIIWQSNRYHWQCLGGHGSSNDLVESTRQALNHMIASLEADSSLLPENVNGSKA
Ga0187777_100153377	3300017974	Tropical Peatland	MESVEQELMIMLKHLPIPITITWLSNRYHWQCLDGHGSSNDLVEATGQGLNYLIALLQTDTSRSTENKSGSMA
Ga0187766_100337443	3300018058	Tropical Peatland	MESVEQELMIMLKHLPIPITITWLINRYHWQCLDGHGSSNDLVEATGQGLNYLIALLQTDTSRSTENKSGSTA
Ga0066667_103190542	3300018433	Grasslands Soil	MASIEQDLMVMLQHLPIPIIITWQSNRYQWQCVDGQGSSTDLVEATGQSLNYLIASLKTDTSRLTENKSGSHYAD
Ga0066669_105301153	3300018482	Grasslands Soil	MASIEQDLMVMLRQLPIPITITWKTNRYHWQCVEGFGSSPDLVEAVGQALKYLIAFLAPDTSRMTNISHESAV
Ga0210399_101917922	3300020581	Soil	MASIEQDLMVMLRQLPVAITITWQSNRYHWQCVEGHGSSPDLVEAIGQALKYLITFLATDTGTVANNRRGSTA
Ga0210399_103635012	3300020581	Soil	MASIEQDLMVMLQHLPVPITITWQSGRYHWQCLEGHGSSNDLVEATGQGLNYLIASLKTDRGSLTENKSGFTA
Ga0179596_103538102	3300021086	Vadose Zone Soil	MASIEQDLMVMLRQLPVAITITWQSNRYRWQCVEGHGSSPDLVEATGQALKYLITFLATDTGTVANNRRGSTA
Ga0210404_104581651	3300021088	Soil	MASIEQELMVMLQHLSVPITITWQSNRYHWQCLDERGSSNDLVEATRQGLNYLIASLKTDRDSLTENKSGFTA
Ga0210402_101703872	3300021478	Soil	MASIEQDLMVMLQHLPVPITITWQSGRYHWQCLDGHGSSNDLVEATGQGLNYLIASLKTDRGSLTENKSGFTA
Ga0210409_101901061	3300021559	Soil	MASIEQDLMVMLRQLPVAITITWQSNRYHWQCVEGHGSSPDLVEATEQALKYLITLLATDTGTVANNRRGSTA
Ga0207693_105890031	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MASIEQDLMVMLQHLPIPITITWQSNRYHWQCVEGHGSSPDLVEATEQGLTYLIATFKSNTSRLTENNR
Ga0209647_10156783	3300026319	Grasslands Soil	MTNIEQDFIVMLRQLPIAITITWQNSRYHWQYAGGKDASSDLVEAVKQALQHLMACLAPDTSRATDNSRAHLTS
Ga0209056_100485821	3300026538	Soil	MASIEQDLMVMLQHLPIPITITWQSNRYHWQCVDGHGSSPDLVEATGQGLKYLIASLKTDTSRFTENNRGSTT
Ga0209648_103414461	3300026551	Grasslands Soil	MASIEQDLMVMLRQLPVAITITWQSNRYHWQCVEGHGSSPDLVEATGQALKYLITFLATDTGTVANNRRGSTA
Ga0209648_108208261	3300026551	Grasslands Soil	MASIEQDLMVMLRQLPVAITITWQSNRYHWQCIEGHGSSPDLVEATGQALKYLITFLATDTGTVA
Ga0208199_10212791	3300027497	Peatlands Soil	MASIEQDLMVMLQHLPVPITITWQSGRYHWQCLDGHGSSNDLVDATGQGLNYLIASLKTDRDSLTENKSGFPA
Ga0209009_10267432	3300027667	Forest Soil	MASIEQDLMVMLRQLPVAITITWQSNRYHWQCVEGHGSSPDLVEASGQALKYLITFLATDTGTVANNRRGSTA
Ga0209590_105226572	3300027882	Vadose Zone Soil	MASIEQDLMVMLRQLPVSITITWQSNRYHWQCVEGHGSSPDLVEATGQALKYLITFLATDIGTVANNRRGSTA
Ga0209068_102719451	3300027894	Watersheds	VNMASMEQDLMVMLRQLPVPITITWQSNRYHWQCVEGHGSSPNLVEASGQALKYLITSLATDISTVANNSREFTS
Ga0209068_106266412	3300027894	Watersheds	MASIEQNLMVMLQNLPVPITITWQSNRYHWQCLDGHGSSNDLVEAIGQGLNYLITTLKTDRGSLTKNKSGYRA
Ga0209048_1000275019	3300027902	Freshwater Lake Sediment	MASIEQELMVMLQNLPVPITITWQSNRYHWQCIDGHGSSNDLVEATGQGLNYLITYLQTDSHGLTEKKSSSMA
Ga0209048_101548403	3300027902	Freshwater Lake Sediment	MASIEQDLMVMLQHLPVPITITWQSNRYHWQCLDGHGSSIDLVEATRQGLNYLIASLKTDSRRLAENKSGSIA
Ga0209583_107212641	3300027910	Watersheds	QLPVAITITWQSNRYHWQCVEGHGSSPNLVEATGQALKYLITFLATETGTVANNRRGSTA
Ga0209698_102430492	3300027911	Watersheds	MASIEQDLMVMLQHLPIPITITWQSNRYHWQCVDGHGSSTDLVEATGQGLKYLIASLNTDASRLTENKSGSMS
Ga0209698_107176891	3300027911	Watersheds	MASIEQELMVMLQNLPVPITITWQSNRYHWQCIDGHGSSNDLVEATSQGLNYLITYLQTDSHSLTEKKSSSMA
Ga0209698_111923011	3300027911	Watersheds	MASIEQDLMVMLQNLPIPITITWQSNRYHWQCIDGCGSSNNLVETTEQGLNYLIASLKADSGRVTEKKSGSTA
Ga0209069_105409831	3300027915	Watersheds	MASIEQDLMVMLQHLPVPITITWQSNRYHWQCVDGHGSSSDLVEATGQALKYLIATLKSDTKRKHIDHAD
Ga0310037_104265722	3300030494	Peatlands Soil	HLIYIFYSKLRPGDVNMASIEQDLMVMLRQLPVPITITWQSNRYHWQCVEGHGSSTNLVEASEQALKYLITSLATDISTVANNSREFTS
Ga0311301_101034616	3300032160	Peatlands Soil	MASIEQDLMVMLQHLPIPITITWQSNRYFWQCIDGHGSSNNLVETTEQGLNYLIASLKADPGRITEKKSGSTA
Ga0311301_101286832	3300032160	Peatlands Soil	MASIEQDLMVMLRQLPVPITITWQSNRYHWQCVEGHGSSTNLVEASEQALKYLITSLATDISTVANNSREFTS
Ga0311301_119522952	3300032160	Peatlands Soil	MASIEQDLMVMLQQLPVPISITWQSNRYHWQCVEGHGSSPNLVEASGQALKYLITSLATDISTVANNSREFTA
Ga0311301_125301982	3300032160	Peatlands Soil	MASIEQELMVMLQNLPVPITITWQSNRYHWQCIDGHGSSNDLVETAGQGLNFLITSLQTDSHSLTEKKSSSMA
Ga0306920_1025152021	3300032261	Soil	MASIEQELMVMLQQLPIPITITWQNSRYHWQCVEGHGSSIDLVESTGQALKYLITFLASDTSRIPDISHGSTAV
Ga0314865_156258_3_191	3300033806	Peatland	MESIEQELMIMLKQLPVPITIIWHSNRYHWQCLGGHGSSNDLVEATSQALNYMIALLATDSSL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084567

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences