Metagenome / Metatranscriptome Family F084561

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F084561
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	78 residues
Representative Sequence	FFRTVTWLWAGIFAASAIGLAVLLTAVPAPVFLLLTTVVTVAGVAAGTLLSVLWFIRMLRRCGLRVRFGQA
Number of Associated Samples	100
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.79 %
% of genes near scaffold ends (potentially truncated)	95.54 %
% of genes from short scaffolds (< 2000 bps)	92.86 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (95.536 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.286 % of family members)
Environment Ontology (ENVO)	Unclassified (27.679 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.179 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.60% β-sheet: 0.00% Coil/Unstructured: 40.40%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01522	Polysacc_deac_1	17.86
PF04879	Molybdop_Fe4S4	3.57
PF08240	ADH_N	3.57
PF00107	ADH_zinc_N	1.79
PF02720	DUF222	1.79
PF00652	Ricin_B_lectin	1.79
PF12852	Cupin_6	1.79
PF10518	TAT_signal	1.79
PF01638	HxlR	0.89
PF01844	HNH	0.89
PF00532	Peripla_BP_1	0.89
PF13738	Pyr_redox_3	0.89
PF01872	RibD_C	0.89
PF01699	Na_Ca_ex	0.89
PF13622	4HBT_3	0.89
PF13340	DUF4096	0.89
PF12697	Abhydrolase_6	0.89
PF08530	PepX_C	0.89
PF04545	Sigma70_r4	0.89
PF00313	CSD	0.89
PF03372	Exo_endo_phos	0.89
PF06150	ChaB	0.89
PF13386	DsbD_2	0.89
PF00982	Glyco_transf_20	0.89
PF01609	DDE_Tnp_1	0.89
PF08546	ApbA_C	0.89
PF03551	PadR	0.89
PF02909	TetR_C_1	0.89
PF01037	AsnC_trans_reg	0.89
PF05995	CDO_I	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	17.86
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.79
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.89
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.89
COG5553	Predicted metal-dependent enzyme of the double-stranded beta helix superfamily	General function prediction only [R]	0.89
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.89
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.89
COG4572	Cation transport regulator ChaB	Inorganic ion transport and metabolism [P]	0.89
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.89
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.89
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.89
COG2936	Predicted acyl esterase	General function prediction only [R]	0.89
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.89
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.89
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.89
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.89
COG1309	DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmA	Transcription [K]	0.89
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	0.89
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	0.89
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.54 %
Unclassified	root	N/A	4.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.54 %
Unclassified	root	N/A	4.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.54 %
Unclassified	root	N/A	4.46 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	86.61 %
Unclassified	root	N/A	4.46 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	85.71 %
Unclassified	root	N/A	4.46 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	61.61 %
Unclassified	root	N/A	4.46 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	16.07 %
Unclassified	root	N/A	4.46 %
Actinopolysporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales	2.68 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	2.68 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.79 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.89 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.89 %

Name	Rank	Taxonomy	Distribution
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	16.07 %
Unclassified	root	N/A	4.46 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2.68 %
Actinopolysporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae	2.68 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.89 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	16.07 %
Unclassified	root	N/A	4.46 %
Actinopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae → Actinopolyspora	2.68 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	0.89 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.89 %
Kutzneria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	0.89 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.89 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.89 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.89 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	16.07 %
Unclassified	root	N/A	4.46 %
Actinopolyspora halophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae → Actinopolyspora → Actinopolyspora halophila	2.68 %
Streptacidiphilus neutrinimicus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus neutrinimicus	0.89 %
Amycolatopsis benzoatilytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis benzoatilytica	0.89 %
Kutzneria buriramensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria → Kutzneria buriramensis	0.89 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	0.89 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.89 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.89 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.89 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps__Contig_176408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1126	Open in IMG/M
3300001867\|JGI12627J18819_10460178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	521	Open in IMG/M
3300002245\|JGIcombinedJ26739_100756823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	851	Open in IMG/M
3300002568\|C688J35102_120933504	All Organisms → cellular organisms → Bacteria	2535	Open in IMG/M
3300004152\|Ga0062386_101338162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	596	Open in IMG/M
3300005434\|Ga0070709_10445597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	974	Open in IMG/M
3300005434\|Ga0070709_10654758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	813	Open in IMG/M
3300005435\|Ga0070714_100112724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2410	Open in IMG/M
3300005435\|Ga0070714_100847216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	886	Open in IMG/M
3300005436\|Ga0070713_100589140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1056	Open in IMG/M
3300005436\|Ga0070713_100781819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	914	Open in IMG/M
3300005439\|Ga0070711_101036901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	705	Open in IMG/M
3300005439\|Ga0070711_101759451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	543	Open in IMG/M
3300005446\|Ga0066686_10601807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	747	Open in IMG/M
3300005454\|Ga0066687_10512349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	710	Open in IMG/M
3300005466\|Ga0070685_10367804	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300005602\|Ga0070762_10494390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	801	Open in IMG/M
3300006028\|Ga0070717_10690363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	927	Open in IMG/M
3300006028\|Ga0070717_10732892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	898	Open in IMG/M
3300006028\|Ga0070717_11059541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	738	Open in IMG/M
3300006028\|Ga0070717_11547336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	601	Open in IMG/M
3300006028\|Ga0070717_11995247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	523	Open in IMG/M
3300006175\|Ga0070712_100029098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3701	Open in IMG/M
3300006606\|Ga0074062_11971053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis benzoatilytica	519	Open in IMG/M
3300006804\|Ga0079221_10888237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	652	Open in IMG/M
3300009011\|Ga0105251_10332251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	692	Open in IMG/M
3300009090\|Ga0099827_11194493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	661	Open in IMG/M
3300009101\|Ga0105247_10218293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1289	Open in IMG/M
3300009162\|Ga0075423_13127622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae → Actinopolyspora → Actinopolyspora halophila	507	Open in IMG/M
3300010046\|Ga0126384_12013874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	552	Open in IMG/M
3300010048\|Ga0126373_11176820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	833	Open in IMG/M
3300010360\|Ga0126372_10366895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1299	Open in IMG/M
3300010361\|Ga0126378_11888685	Not Available	680	Open in IMG/M
3300010373\|Ga0134128_11205476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	835	Open in IMG/M
3300010396\|Ga0134126_10760212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1098	Open in IMG/M
3300010396\|Ga0134126_11689325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	695	Open in IMG/M
3300010858\|Ga0126345_1167369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	993	Open in IMG/M
3300010867\|Ga0126347_1587603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	792	Open in IMG/M
3300010869\|Ga0126359_1460162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	842	Open in IMG/M
3300011120\|Ga0150983_16710129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537	Open in IMG/M
3300012201\|Ga0137365_10580949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	822	Open in IMG/M
3300012359\|Ga0137385_11209002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus → Streptacidiphilus neutrinimicus	617	Open in IMG/M
3300012507\|Ga0157342_1053853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	573	Open in IMG/M
3300012930\|Ga0137407_10943216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae → Actinopolyspora → Actinopolyspora halophila	817	Open in IMG/M
3300012951\|Ga0164300_10106226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1242	Open in IMG/M
3300012984\|Ga0164309_10195210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1387	Open in IMG/M
3300013104\|Ga0157370_11001283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	756	Open in IMG/M
3300013307\|Ga0157372_11969626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	671	Open in IMG/M
3300014169\|Ga0181531_10498610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	752	Open in IMG/M
3300014325\|Ga0163163_11744943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	683	Open in IMG/M
3300014969\|Ga0157376_12300481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	578	Open in IMG/M
3300015374\|Ga0132255_101825443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	924	Open in IMG/M
3300017993\|Ga0187823_10133851	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300018433\|Ga0066667_11048422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	704	Open in IMG/M
3300020078\|Ga0206352_10098722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	761	Open in IMG/M
3300020199\|Ga0179592_10109787	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300020579\|Ga0210407_10367834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1125	Open in IMG/M
3300020582\|Ga0210395_10716349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	748	Open in IMG/M
3300020583\|Ga0210401_10174977	All Organisms → cellular organisms → Bacteria	2001	Open in IMG/M
3300020610\|Ga0154015_1372823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	943	Open in IMG/M
3300021170\|Ga0210400_10637884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	878	Open in IMG/M
3300021180\|Ga0210396_10167814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1968	Open in IMG/M
3300021286\|Ga0179583_1094998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	749	Open in IMG/M
3300021362\|Ga0213882_10174632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	884	Open in IMG/M
3300021363\|Ga0193699_10069328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1391	Open in IMG/M
3300021377\|Ga0213874_10029027	All Organisms → cellular organisms → Bacteria	1585	Open in IMG/M
3300021404\|Ga0210389_10639079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	835	Open in IMG/M
3300021406\|Ga0210386_10026649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4527	Open in IMG/M
3300021407\|Ga0210383_11126383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	662	Open in IMG/M
3300021475\|Ga0210392_10137391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1656	Open in IMG/M
3300021478\|Ga0210402_10724212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	918	Open in IMG/M
3300021559\|Ga0210409_10364627	Not Available	1297	Open in IMG/M
3300024279\|Ga0247692_1061822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	584	Open in IMG/M
3300024288\|Ga0179589_10060622	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300025906\|Ga0207699_10184771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1403	Open in IMG/M
3300025913\|Ga0207695_10423026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1216	Open in IMG/M
3300025928\|Ga0207700_11468981	Not Available	605	Open in IMG/M
3300025929\|Ga0207664_10032140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4021	Open in IMG/M
3300025929\|Ga0207664_10696917	Not Available	913	Open in IMG/M
3300025929\|Ga0207664_11737963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	546	Open in IMG/M
3300025944\|Ga0207661_10892875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	819	Open in IMG/M
3300025972\|Ga0207668_10059197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2683	Open in IMG/M
3300026277\|Ga0209350_1121987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	591	Open in IMG/M
3300026498\|Ga0257156_1097784	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria → Kutzneria buriramensis	611	Open in IMG/M
3300026557\|Ga0179587_10370412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	931	Open in IMG/M
3300027119\|Ga0209522_1039636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	585	Open in IMG/M
3300027528\|Ga0208985_1004128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2642	Open in IMG/M
3300027855\|Ga0209693_10273208	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300027884\|Ga0209275_10621258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	621	Open in IMG/M
3300028811\|Ga0307292_10122078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1038	Open in IMG/M
3300028824\|Ga0307310_10100495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1286	Open in IMG/M
3300030524\|Ga0311357_10349314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1407	Open in IMG/M
3300031170\|Ga0307498_10024686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1416	Open in IMG/M
3300031525\|Ga0302326_12792116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	604	Open in IMG/M
3300031681\|Ga0318572_10866422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinopolysporales → Actinopolysporaceae → Actinopolyspora → Actinopolyspora halophila	537	Open in IMG/M
3300031805\|Ga0318497_10723996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	558	Open in IMG/M
3300031823\|Ga0307478_10147120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1866	Open in IMG/M
3300031835\|Ga0318517_10538744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	525	Open in IMG/M
3300031938\|Ga0308175_100775563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1047	Open in IMG/M
3300031939\|Ga0308174_10531901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	966	Open in IMG/M
3300031996\|Ga0308176_12781834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	520	Open in IMG/M
3300032074\|Ga0308173_11903893	Not Available	561	Open in IMG/M
3300032174\|Ga0307470_11274300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	601	Open in IMG/M
3300032783\|Ga0335079_11805834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	595	Open in IMG/M
3300032805\|Ga0335078_12569086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	523	Open in IMG/M
3300032892\|Ga0335081_10436036	All Organisms → cellular organisms → Bacteria	1672	Open in IMG/M
3300032895\|Ga0335074_10831942	All Organisms → cellular organisms → Bacteria → Terrabacteria group	854	Open in IMG/M
3300032896\|Ga0335075_10457941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1325	Open in IMG/M
3300032898\|Ga0335072_10392760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1493	Open in IMG/M
3300032898\|Ga0335072_10455388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1346	Open in IMG/M
3300033134\|Ga0335073_11527911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	642	Open in IMG/M
3300033475\|Ga0310811_10701169	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.29%
Host-Associated	Host-Associated	10.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.61%
Plants	Host-Associated → Plants	10.71%
Aquatic	Environmental → Aquatic	2.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.14%
Freshwater	Environmental → Aquatic → Freshwater	2.68%
Peat	Environmental → Terrestrial → Peat	1.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.79%
Roots	Host-Associated → Plants → Roots	1.79%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.00%
Loam	Environmental → Terrestrial → Soil → Loam	26.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.25%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.79%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.07%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.57%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.57%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.79%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	4.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.57%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.68%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.79%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.79%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.89%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021286	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027119	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027528	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_03282290	2199352024	Soil	GGAAPAVGRAPWPGRFFRTVTWLWAGIFAVSAIGLAVLLAAVPTPVFLLAHHVVTVAGVAAGTLLSVLWFIRMLRRCGLRVRFGRA
JGI12627J18819_104601781	3300001867	Forest Soil	HPGLDRFFRGVTWLWAGIFAASTIGMAALLVLEPAAVFLLLTTVVTVAGVAAGTVASVVWFIQMLRRSGLRVRFGQA*
JGIcombinedJ26739_1007568232	3300002245	Forest Soil	AKLAAEVVALRQPSAAHPGLDSFFRGVTWLWAGIFAATAIGLVILLVVEPAPVFLLLTTMVTIAGTAAGTLMSVLWFIRVLRRCGLRVRFGQA*
C688J35102_1209335042	3300002568	Soil	VTWLWAGIFAASAIGPAVLLAAEPAPVFLLLTVVTVAGVAAGTLLSVLWFIRMLRRCGLRVRFGQA*
Ga0062386_1013381622	3300004152	Bog Forest Soil	FFRGVTWLWAGIFAASTIGLVVVLVAEPVPVFLLVTTVVTVAGVAGGTLASVMWFIRMLRRHGLRVRFGPA*
Ga0070709_104455972	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	GIFAASTIGLVILLAVEPVPVFLLFTTVVTVAGVAAGTVLSVLWFVRMLRRYDLRVRFGPA*
Ga0070709_106547582	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	PSAAHPGLDRFFRTVTWLWAGIFAASAIGLAVLLAAVPTPVFLLLTTLVTVAGVAAGTLLSVLWFIRMLRRCGLRVRFGRA*
Ga0070714_1001127241	3300005435	Agricultural Soil	WAGIFAASTIGLVILLAVEPVPVFLLFTTVVTVAGVATGTVLSVVWFVRMLRRCDLRVRFGPA*
Ga0070714_1008472161	3300005435	Agricultural Soil	QPSAAHPGLDRFFRTVTWLWAGIFAASAIGLAVLLAAVPTPVFLLLTTLVTVAGVAAGTLLSVLWFIRMLRRCGLRVRFGRA*
Ga0070713_1005891403	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AHPGLDRFFRGVTWLWAGIFAASTAGLAALLAFEPVSVFLPLTTVVTVAGVAVGTAASVVWFIRMMRRSGLRVRFGHA*
Ga0070713_1007818191	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LAAEVVALRQPSAAHPGLDRFFRTVTWLWAGIFAASAIGLAVLLAAVPTPVFLLLTTLVTVAGVAAGTLLSVLWFIRMLRRCGLRVRFGRA*
Ga0070711_1010369011	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VTWLWAGIFAASTIGLAVLLVVEPASVFLLLATVVTVAGVAAGTVASVLWFVRMLRRCGLRVRFGHTGTTAHRPVT*
Ga0070711_1017594512	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RGVTWLWAGIFAASTIGLVILLAVEPVPVFLLFTTVVTVAGVATGTVLSVVWFVRMLRRCDLRVRFGPA*
Ga0066686_106018071	3300005446	Soil	QLAAEVVALRQPSAAHPGLDSFFRTVTWLWAGIFAASAIGLAVLLPAVPAAVFLLLTTVVTVAGVAAGTLASVLWFIRMLRRCGLRVRFGQA*
Ga0066687_105123492	3300005454	Soil	RTVTWLWAGIFAASAIGLAVLLAAVPTPVFLLLTTVVTVAGVAAGTLASVLWFIRMLRRCGLRVRFGQA*
Ga0070685_103678043	3300005466	Switchgrass Rhizosphere	MWAGIFAASAIGLAVLLAAVPTPVFLLLTTLVTVVGVAVGTLASVLWFIRMLRRCGLRVRFGRA*
Ga0070762_104943901	3300005602	Soil	VAQLAAEVVALRHPSAVHPGLDRFFRGVTWLWAGIFAASTIGLAALLVVEPTAVFLLLTTVVTVVGVAAGTVASVFWFSRMLRRCGLRVRFGQA*
Ga0070717_106903631	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	TGRPLVAKLAAEVVALRQPSAAHPGLESFFRGVTWLWAGIFAVTAIGLAIVLAVEPASVFLLFTTVGTIAGIAAGTALSVVWFIWMLRRCGLRVRFRQA*
Ga0070717_107328921	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	RFFRTVTWLWAGIFAASAIGLAVLLAAVPTPVFLLLTTLVTVAGVAAGTLLSVLWFIRMLRRCGLRVRFGRA*
Ga0070717_110595411	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	FFRGVTWLWAGIFAASTIGLVILLAVEPVPVFLLFTTVVTVAGVAAGTVLSVLWFVRMLRRCDLRVRFGPA*
Ga0070717_115473362	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	QPSAAHPGLDRFFRGVTWLWAGIFAASTIGLVILLAIEPVPVFLLFTTVVTVVGVAAGTVLSVLWFVRMLRRCDLRVRFGPA*
Ga0070717_119952471	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	RVTWLWAGIFAASAIGMAVLLVVEPIPVFLLLTTVVTVAGVAAGTLLSILWFIRILRRCGLRVRFGRP*
Ga0070712_1000290981	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GIFAASTIGLVILLAVEPVPVFLLFTTVVTVAGVAAGTVLSVLWFVRMLHRCDLRVRFGPA*
Ga0074062_119710531	3300006606	Soil	REIERETLVAQLAAEVVALRQPSAAHPGLDRFFRTVTWLWAGIFAVSAIGLAVLLAAVPAPVFLLLTTVVTVAGVAAGTLLSVLWFIRMLRRCGLRVRFGQA*
Ga0079221_108882372	3300006804	Agricultural Soil	RQPSAAHPGLDRFFRTVTWLWAGIFAASAIGLAVLLTAVPTPVFLLLTTLVTVAGVAAGTLLSVLWFIRMLRRCGLRVRFGRP*
Ga0105251_103322511	3300009011	Switchgrass Rhizosphere	AAHPGLDRFFRTVTWMWAGIFAASAIGLAVLLAAVPTPVFLLLTTLVTVVGVAVGTLASVLWFIRMLRRCGLRVRFGRA*
Ga0099827_111944932	3300009090	Vadose Zone Soil	TWLWAGIFAASTIGLAALLAFESATVFLLFTTVVTVAGTAAGTVLSVLWFIRMLRRSGLRVRFGQA*
Ga0105247_102182933	3300009101	Switchgrass Rhizosphere	GIFAASAIGLAVLLTAVPTPVFLLLTTLVTVAGVAAGTLASVLWFIRVLRRCGLRVRFGRA*
Ga0075423_131276221	3300009162	Populus Rhizosphere	QPSAAHPGLDRFFRTVTWMWAGIFAASAIGLAVLLAAVPTPVFLLLTTLVTVAGVAAGTLLSVLWFIRMLRCCGLRVRFGRA*
Ga0126384_120138741	3300010046	Tropical Forest Soil	WLWAGIFAVSAVGLAVLLTAVPAPVFLLLTTVVTVAGVAAGTLVSVLWFIRMLRRCGLRVRFGQA*
Ga0126373_111768201	3300010048	Tropical Forest Soil	LERFFRGVTWLWAGIFAASTIGMAALLALEPAMVFLLLTTVVTVAGVAAGTCLSVVWFIRMLRRCGLRVRFG*
Ga0126372_103668953	3300010360	Tropical Forest Soil	PSAAHPGLDSFFRGVTWLWAGIFAVSAVGLAVLLAAVPASVFLLLTTVVTVAGVAAGTLVSVVWFIRMLRRCGLRVRFGQA*
Ga0126378_118886851	3300010361	Tropical Forest Soil	AEIVALRQSSAAHPSLDSFFRTTTWLWAGIFAASAIALAVLLMLEPATVFLLLSTVVTVAGVVLGVFLSVLWFIRMLRRSGLRVCFGQA*
Ga0134128_112054762	3300010373	Terrestrial Soil	PSAAHPGLDRFFREVTWLWAGIFAASTAGLAALLAFEPVSVFLPLTSVVTVAGVAVGTAASVVWFIRMMRRSGLRVRFGHA*
Ga0134126_107602123	3300010396	Terrestrial Soil	RFFRGVTWLWAGIFAASTIGMAALLVLEPVTVFLLLTTVVTVAGVAAGTVASVVWFIRTLRRSGLRVRFGHA*
Ga0134126_116893251	3300010396	Terrestrial Soil	RTVTWLWAGIFAASAIGLAVLLTAVPAPVFLLLTTVVTVAGVAAGTLLSVWWFIRMLRRCGLRVRFGQA*
Ga0126345_11673691	3300010858	Boreal Forest Soil	PSAAHPGLDRFFRGVTWLWAGIFAASTIGLVVLLVMEPVPVFLLFTTVVTVAGVAGGTLLSVMWFIRMLRHYGLRVRFGPA*
Ga0126347_15876033	3300010867	Boreal Forest Soil	AAEVVALRQSAAHPGLDRFFRGVTWLWAGIFAASTVGLAVPLFLEPAAVFLLLTTVVTVAGIAAGTVASVVWFIRMLRGSGLRVSFGPA*
Ga0126359_14601622	3300010869	Boreal Forest Soil	LVAQLAAEVVALRQPSDAHPGLARFFRGVTWLWAGIFAASTIGLAALLVLEPATIFLLLTTVVTVGGVAAGTALSTWWFVRMLRRSGLRVRFGQA*
Ga0150983_167101291	3300011120	Forest Soil	PGLESFFRGVTWLWAGIFAATAIGLAIVLAVEPAAVFLLCTTVVTIAGVAAGTVLSVLWFIRMARRCGLRVRFRQA*
Ga0137365_105809492	3300012201	Vadose Zone Soil	HPGLDNFFRTVTWLWAGIFAASAIGLAVLLAAVPAPVFLLFTTVVTVAGVAAGTLLSILWFIRMLRRCDLRVRFGHA*
Ga0137385_112090022	3300012359	Vadose Zone Soil	VTWLWAGIFAASTIGLAALLAFESATVFLLFTTVVTVAGTAAGTVLSVLWFIRMLRRSGLRVRFGQA*
Ga0157342_10538531	3300012507	Arabidopsis Rhizosphere	RTVTWLWAGIFAASAIGLAVLLTAVPTPVFLLLTTLVTVAGVAAGTLLSVLWFIRMLRRCGLRVRFGRA*
Ga0137407_109432161	3300012930	Vadose Zone Soil	VAQLAAEVVALRQPSAAHPGLDRFFRGVTWLWAGIFAASTIGLVILLAVEPVPVFLLFTTVVTVASIAAGTVASVLWFVRMLRRCDLRVRFGQA*
Ga0164300_101062263	3300012951	Soil	AGIFAASAIGLAVLLAAVPTPVFLLLTTLVTVAGVAAGTLASVLWFIRMLRRCGLRVSFGRA*
Ga0164309_101952103	3300012984	Soil	AGIFAASAIGLAVLLAAVPTPVFLLLTTLVTVAGVAAGTLLSVLWFIRMLRRCGLRVRFGRA*
Ga0157370_110012832	3300013104	Corn Rhizosphere	RQPSHAHPSLYRVNHWVTWLWAGFFAVSTIGLAVLLVLEPTAVFLLLTTVVTVAGVVAGTFLSVVWFIRMLRRSGLRVHFGHA*
Ga0157372_119696262	3300013307	Corn Rhizosphere	EVVALRQPSAAHPGLDRFFRTVTWMWAGIFAASAIGLAVLLAAVPTPVFLLLTTLVTVAGVAAGTLASVLWFIRMLRRCGLRVRFGRA*
Ga0181531_104986101	3300014169	Bog	DRFFRGVTWLWAGIFAASTIGLAALLAVEPTAVFLLLTTVVTVGGVAAGTVASVFWFIQMLRRCGLRVRFGQA*
Ga0163163_117449432	3300014325	Switchgrass Rhizosphere	SAAHPGLDRFFRGVTWLWAGIFAASTAGLAALLAFEPVSVFLPLTTVVTVAGVAVGTAASVVWFIRMMRRSGLRVRFGHA*
Ga0157376_123004811	3300014969	Miscanthus Rhizosphere	VANLALCIAFAWTAPTGRPLVAQLAAELVALRQPSAAPPGLARFFRTVTWLWAGIFAVSAIGLAVLLAAVPAPVFLLLTTLVTVAGVAAGTLLSVLWFIRMLRRCGLRVRFGRA*
Ga0132255_1018254431	3300015374	Arabidopsis Rhizosphere	VALRQPSAAHPGLDSFFRTVTWLWAGIFAASAIGLAVLLAAVSTPVFLLLTTLVTVAGVAAGTLLSVLWFIRMLRRCGLRVRFGRA*
Ga0187823_101338511	3300017993	Freshwater Sediment	AEVVALRHPGAAHPGLERFFRGVTWLWAGIFAASTIGLVILLAIEPAPVFLLFTTVVTVAGVAAGTGLSVLWFVRMLRRCDLRVRFGPA
Ga0066667_110484221	3300018433	Grasslands Soil	DKFFRRVTWLWAGIFAASAIGLAVLLAAVPTPVFLLLTTLVTVAGVAAGTLASVLWFIRMLRRCGLRVRFGQA
Ga0206352_100987222	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	AAHPGLDRFFREVTWLWAGIFAASTAGLAALLAFEPVSVFLPLTSVVTVAGVAAGTTASVVWFIRMLRRSGLRVRFGHA
Ga0179592_101097871	3300020199	Vadose Zone Soil	GIFAASAMGLVILLAVAPVPVFLLLTTVVTVAGVATGTFLSVLWFIRMLRRRCGLRIRFGQA
Ga0210407_103678341	3300020579	Soil	WAGIFAASAIGLAILLAVEPVRIFLQFTTVVTVAGIAAGTLLSVLWFIQMLRRCGLRIRFGQA
Ga0210395_107163491	3300020582	Soil	RQPSAAHPGLDRFFRGVTWLWAGIFAASTIGLVILLAVEPVRAFLLLTTVVTVAGIAAGTVASVLWFIRMLHRCDLQVRFGPA
Ga0210401_101749771	3300020583	Soil	AGIFAATAIGLAIVLAIEPASVFLLFTTVVTIAGVAAGTVLSVLWFIRMARRCGLRVRFRQA
Ga0154015_13728233	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	VTWLWAGIFAASTAGLAALLAFEPVSVFLPLTSVVTVAGVAVGTAASVVWFIRMMRRSGLRVRFGHA
Ga0210400_106378841	3300021170	Soil	EVVALRQSSATHPGLDSFFRGTTWLWAGIFAASTIGLAVLLVVEPATVFLLLSTVVTVAGVAVGTFLSILWFVRTKRRSGLRVCFGQA
Ga0210396_101678143	3300021180	Soil	SAAHPGLNSFFRGVTWLWAGIFAASTIGMAALLVLEPVKVFLLLTTVVTVAGVAAGTVASVVWFIRMLRRCGLRVRFGRA
Ga0179583_10949983	3300021286	Vadose Zone Soil	VTWLWAGIFAVSAIGLAVLLAAVPAPVFLLLTTVVTVAGVAAGTLLSVLWFIRMLRRCGLRVRFGRA
Ga0213882_101746321	3300021362	Exposed Rock	GKPLVAQLAAEVVALRQPSAAHPGLARFFRTVTWLWAGIFAASAIGLAVLLAVEPIPVFLLLTTVVTVAGAVAGTLLSILWFIRMLRRCGLRVRFGQA
Ga0193699_100693281	3300021363	Soil	FFRTVTWLWAGIFAASAIGLAVLLTAVPAPVFLLLTTVVTVAGVAAGTLLSVLWFIRMLRRCGLRVRFGQA
Ga0213874_100290271	3300021377	Plant Roots	SAAPSGLDRFFRGVTWLWAGIFAASAIGLAVLLAVEPARVFLLLTTVVTVAGVAAGTLLSVLWFIRMLRHCGLRVRFGQA
Ga0210389_106390793	3300021404	Soil	FRGVTWLWAGIFAASTIGMAALLVLEPAAVFLLLTTVVTVAGVAAGTVASVVWFVRMLRRSGLRVRFGQA
Ga0210386_100266491	3300021406	Soil	RQTSAAHPGLDRFFRGVTWLWAGVFAASTLGMAALLVLEPATVFLLLTTVVTVAGVAAGTAASVVWFIRMLRRSGLRVRFGHA
Ga0210383_111263832	3300021407	Soil	GVTWLWAGIFAASTIGMAALLVLEPVKVFLLLTTVVTVAGVAAGTVASVVWFIRMLRRCGLRVRFGRA
Ga0210392_101373913	3300021475	Soil	PTGRPLVAKLAAEVVALRQPSAAHPGLESFFRGVTWLWAGIFAATAIGLAIVLAVEPASVFLLFTTVVTIAGVAAGTVLSVLWFIRMARRCGLRVRFRQA
Ga0210402_107242121	3300021478	Soil	VAKLAAEVVALRQPSAAPPGLESFFRGVTWLWAGIFAATAIGLAIVLAVEPASVFLLFTTVVTIAGIAAGTVFSVLWFSRMARRCGLRVRFRQA
Ga0210409_103646272	3300021559	Soil	FFRGVTWLWAGIFAATAIGLAIVLAVEPASVFLLFTTVVTIAGVAAGTVLSVLWFIRMARRCGLRVRFRQA
Ga0247692_10618222	3300024279	Soil	LWAGIFAASAIGLAVLLAAVPTPVFLLLTTLVTVAGVAAGTLASVLWFIRMLRRCGLRVRFGRA
Ga0179589_100606221	3300024288	Vadose Zone Soil	VAQLAAEVVALRQPSAAHPGLDRFFRGVTWLWAGIFAASAMGLVILLAVAPVPVFLLLTTVVTVAGVATGTFLSVLWFIRMLRRRCGLRIRFGQA
Ga0207699_101847713	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LWAGIFAASAIGLAVLLTAVPTPVFLLLTTLVTVAGVAAGTLLSVLWFIRVLRRCGLRVRFGRA
Ga0207695_104230263	3300025913	Corn Rhizosphere	TWLWAGIFAASTAGLAALLAFEPVSVFLPLTTVVTVAGVAVGTAASVVWFIRMMHRSGLRVRFGHA
Ga0207700_114689811	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GIFAASTIGLVILLAVEPVPVFLLFTTVVTVAGVAAGTVLSVLWFVRMLRRYALRVRFGP
Ga0207664_100321404	3300025929	Agricultural Soil	QLAAEVVALRQPSAAHPGLDRFFRGVTWLWAGIFAASTVGLVILLAVEPVPVFLLFTTVVTVAGVAAGTVASVLWFIRMLRRCDLRVRFGQA
Ga0207664_106969172	3300025929	Agricultural Soil	GIFAASTIGLVILLAVEPVPVFLLFTTVVTVAGVAAGTVLSVLWFVRMLRRYDLRVRFGP
Ga0207664_117379632	3300025929	Agricultural Soil	PGLDRFFRGVTWLWAGIFAASTIGLVILLAVEPVPVFLLFTTVVTVAGVATGTVLSVVWFVRMLRRCDLRVRFGPA
Ga0207661_108928752	3300025944	Corn Rhizosphere	LWAGIFAASAIGLAVLLAAVPAPVFLLLTTLVTVAGVAAGTLASVLWFIRMLRRCGLRVRFGRA
Ga0207668_100591974	3300025972	Switchgrass Rhizosphere	AEVVALRQPSAAPPGLARFFRTVTWLWAGIFAASAIGLAVLLAAVPAPVFLLLTTLVTVAGVAAGTLLSVLWFIRMLRRCGLRVRFGRA
Ga0209350_11219871	3300026277	Grasslands Soil	RRPSAAHPGLDNFFRTVTWLWAGIFAASAIGLAVLLAAVPAPVFLLFTTVVTVAGVAAGTLLSILWFIRMLRRCDLRVRFGHA
Ga0257156_10977841	3300026498	Soil	ARGRQPSAAHPGLDRFFRGVTWLWAGIFAASAMGLVILLAVAPVPVFLLLTTVVTVAGVATGTFLSVLWFIRMLRRRCGLRIRFGQA
Ga0179587_103704121	3300026557	Vadose Zone Soil	VAQLAAEMVALRQPSAAHPGLDRFFRGVTWLWAGIFAASAMGLVILLAVAPVPVFLLLTTVVTVAGVATGTFLSVLWFIRMLRRRCGLRIRFGQA
Ga0209522_10396362	3300027119	Forest Soil	GLDRFFRGVTWLWAGIFAASTIGMAALLVLEPTAVFLLLTTVVTVAGVAAGTAASVVWFIRMLRRSGLRVRFGHA
Ga0208985_10041284	3300027528	Forest Soil	AEVVALRHTSAAHPGLDSFFRGVTWLWAGIFAASTIGMAALLVLEPATVFLLLTTVVTVAGVAAGTAASVVWFIRMLRRSGLRVRFGQA
Ga0209693_102732082	3300027855	Soil	FRGVTWLWAGIFAASTIGLAALLVVEPTAVFLLLTTVVTVVGVAAGTVASVFWFSRMLRRCGLRVRFGQA
Ga0209275_106212581	3300027884	Soil	VAQLAAEVVALRHPSAVHPGLDRFFRGVTWLWAGIFAASTIGLAALLVVEPTAVFLLLTTVVTVVGVAAGTVASVFWFSRMLRRCGLRVRFGQA
Ga0307292_101220782	3300028811	Soil	LAAEVVALRQPSAAHPGLDSFFRRVTWLWAGIFAASAIGLAVLLAAVPAPVFLLLTTVVTVAGVAAGTLASVLWFIRMLRRCGLRVRFGQA
Ga0307310_101004951	3300028824	Soil	VVALRQPSAAHPGLDSFFRRVTWLWAGIFAASAIGLAVLLAAVPAPVFLLLTTVVTVAGVAAGTLASVLWFIRMLRRCGLRVRFGQA
Ga0311357_103493143	3300030524	Palsa	FRGVTWLWAGIFAASTIGLAALLVFEPTAVFLLLTTVVTVAGIAAGTLASVVWFARMLHRCGLRVRFGPV
Ga0307498_100246863	3300031170	Soil	FRTVTWLWAGIFAVSAIGLAVLLAAVPAPVFLLLTTVVTVAGVAAGTLLSVLWFIRMLRRCGLRVRFGQA
Ga0302326_127921162	3300031525	Palsa	LRPTSTAHPGLTRFFRGVTWLWAGIFAASTIGLAVALVLEPTAVFLLLSTVVTVAGVAAGTAASVVWFMRMLRRTGLRVRFGPAGTPA
Ga0318572_108664221	3300031681	Soil	VALRHPSAAHPGLDRFFRGVTWLWAGIFAASAIGVAVLLAVEPVRVFLPVTTVVTVAGVAAGTLLSVLWFIQMLRRCGLRVRFGQA
Ga0318497_107239961	3300031805	Soil	SFFRTVTWLWAGIFAASAIGLAVLLAVEPTPVFLLLTTVVTVAGSAAGTLLSVLWFIRMLRRCGLRVRFGQA
Ga0307478_101471201	3300031823	Hardwood Forest Soil	GLDRFFRGVTWLWAGVFAASTLGMAALLVLEPATVFLLLTTVVTVAGVAAGTAASVVWFIRMLRRSGLRVRFGHA
Ga0318517_105387441	3300031835	Soil	FRTVTWLWAGIFAASAIGLAVLLAVEPTPVFLLLTTVVTVAGSAAGTLLSVLWFIRMLRRCGLRVRFGQA
Ga0308175_1007755631	3300031938	Soil	EVVALRQPSAAHPGLDSFFRRVTWLWAGIFAASAIGLAVLLAAVPTPVFLLLTTLVTVAGVAVGTLASVLWFIRMLRRCGLRLRFARA
Ga0308174_105319011	3300031939	Soil	LDRFFRGVTWLWAGIFAASTIGLVILLAVEPVPVFLLFTTVVTVAGVAAGTVLSVLWFVRMLHRCDLRVRFGPA
Ga0308176_127818342	3300031996	Soil	RQPSAAHPGLDRFFRGVTWLWAGIFAASTIGLVILLAIEPVSVFLLFTTVVTVAGVAAGTVASVLWFVRMLRRCGLRVRFARA
Ga0308173_119038932	3300032074	Soil	FAASTIGLGILLAVEPVPVFLLFTTVVTIAGVAAGTVLSVLWFVRVLRRCDLRVRFGPA
Ga0307470_112743002	3300032174	Hardwood Forest Soil	PLVAQLAAEVVALRRPAATHAGLDRFFRGVTWLWAGIFAASTVGLVLLMVFEPVPVFLLATTVVTVAGVVAGTAASVVWFMSMLRRHGLRVRFGPA
Ga0335079_118058341	3300032783	Soil	WAGIFAASTIGLVILLAVEPVPVFLLFTTVVTVAGVAAGTVLSVLWFVRMLRRCDLRVRFGHA
Ga0335078_125690862	3300032805	Soil	AEVVALRQPSAAHPGLESFFRGVTWLWAGIFAATAIGLAIVLAVEPASVFLLFTTVATIAGIAAGTVLSVLWFIRMLRRCGLRVRFRQA
Ga0335081_104360361	3300032892	Soil	FAATAIGLAIVLAVEPASVFLLFTTVATIAGIAAGTVLSVLWFIRMLRRCGLRVRFRQA
Ga0335074_108319421	3300032895	Soil	AGIFAASTIGLAVLLVVEPTSVFLLFTTVVTVAGIAAGTGLSVLWFVRMLRRCGLRVSFGAA
Ga0335075_104579412	3300032896	Soil	EVVALRRPDAAHPGLDRFFRAVTWLWAGIFAASAIGLTALLAVEPARVFLLLTTVVTVAGVAAGTLLSVLWFIRMLRRCGLRVRFGPA
Ga0335072_103927603	3300032898	Soil	AHPGLDRFFRGVTWLWAGIFAASTIGLAVLLVLEPTSIFLLLTTVVTVVGVAAGTGLSVWWFMRMLRRCGLRVRFGQA
Ga0335072_104553881	3300032898	Soil	GLDHFFRTVTWLWAGIFAVSAVGLTVLLAAEPAPVFLLLTTVVTVAGVAAGTLLSVLWFVRMLRRCGLRVRFGQA
Ga0335073_115279111	3300033134	Soil	LVAQLAAEVVALRQPSAAHPGLDRFFRTVTWMWAGIFAASAIGLAVLLAAVPTPVFLLLTTLVTVAGVAAGTLASVLWFIRMLRCCGLRVRFGRA
Ga0310811_107011691	3300033475	Soil	DAHPGLDRFFRGVTWLWAGIFAASTVGLAALLVFEPATVFLLLTTVVTVAGVAAGTAASVVLFIRMLRRSGLRVRFGHA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084561

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences