Metagenome / Metatranscriptome Family F084544

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084544
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	118 residues
Representative Sequence	MLTEARGLLLRGWSKCAQARDLRGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRSDVIAAVDRALALLDHPQAEAV
Number of Associated Samples	97
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	33.03 %
% of genes near scaffold ends (potentially truncated)	41.96 %
% of genes from short scaffolds (< 2000 bps)	72.32 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.321 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (24.107 % of family members)
Environment Ontology (ENVO)	Unclassified (29.464 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.929 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.07% β-sheet: 8.97% Coil/Unstructured: 48.97%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF05491	RuvB_C	30.36
PF05496	RuvB_N	27.68
PF14520	HHH_5	7.14
PF02075	RuvC	6.25
PF04167	DUF402	6.25
PF07499	RuvA_C	2.68
PF01368	DHH	1.79
PF00127	Copper-bind	1.79
PF13473	Cupredoxin_1	0.89
PF02272	DHHA1	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG2255	Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvB	Replication, recombination and repair [L]	58.04
COG0817	Holliday junction resolvasome RuvABC endonuclease subunit RuvC	Replication, recombination and repair [L]	6.25
COG0632	Holliday junction resolvasome RuvABC DNA-binding subunit	Replication, recombination and repair [L]	2.68

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.32 %
Unclassified	root	N/A	2.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.32 %
Unclassified	root	N/A	2.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.32 %
Unclassified	root	N/A	2.68 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	70.54 %
Unclassified	root	N/A	2.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	70.54 %
Unclassified	root	N/A	2.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	50.89 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	10.71 %
Unclassified	root	N/A	2.68 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	50.89 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.68 %
Unclassified	root	N/A	2.68 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	50.89 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.68 %
Unclassified	root	N/A	2.68 %
Methylorubrum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	50.89 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.68 %
Unclassified	root	N/A	2.68 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig506061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2751	Open in IMG/M
3300000550\|F24TB_10398885	All Organisms → cellular organisms → Bacteria	1349	Open in IMG/M
3300000956\|JGI10216J12902_105090890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300000956\|JGI10216J12902_124278699	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300004114\|Ga0062593_102493781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	585	Open in IMG/M
3300004643\|Ga0062591_101566599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300004643\|Ga0062591_102037372	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300005164\|Ga0066815_10024569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	866	Open in IMG/M
3300005172\|Ga0066683_10008161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	5331	Open in IMG/M
3300005329\|Ga0070683_100067568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3329	Open in IMG/M
3300005332\|Ga0066388_101794552	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300005344\|Ga0070661_101925775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300005356\|Ga0070674_101251651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300005439\|Ga0070711_100226781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1455	Open in IMG/M
3300005450\|Ga0066682_10410662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	866	Open in IMG/M
3300005526\|Ga0073909_10052198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1489	Open in IMG/M
3300005549\|Ga0070704_100430658	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300005564\|Ga0070664_100068939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3025	Open in IMG/M
3300005564\|Ga0070664_100414456	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300005713\|Ga0066905_100035778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2882	Open in IMG/M
3300005713\|Ga0066905_100060904	All Organisms → cellular organisms → Bacteria	2372	Open in IMG/M
3300005713\|Ga0066905_100131070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1770	Open in IMG/M
3300005764\|Ga0066903_100870889	All Organisms → cellular organisms → Bacteria	1625	Open in IMG/M
3300005764\|Ga0066903_105176865	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300005983\|Ga0081540_1010001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	6456	Open in IMG/M
3300006058\|Ga0075432_10099705	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300006175\|Ga0070712_100485179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1034	Open in IMG/M
3300006572\|Ga0074051_11623113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	856	Open in IMG/M
3300006575\|Ga0074053_11754613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	669	Open in IMG/M
3300006577\|Ga0074050_12034563	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300006578\|Ga0074059_12160964	All Organisms → cellular organisms → Bacteria	1242	Open in IMG/M
3300006580\|Ga0074049_12337347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300006581\|Ga0074048_13368242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1547	Open in IMG/M
3300006603\|Ga0074064_11712875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300006606\|Ga0074062_12945166	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300006852\|Ga0075433_10821348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	812	Open in IMG/M
3300006854\|Ga0075425_100192906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2341	Open in IMG/M
3300006854\|Ga0075425_102708876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300006914\|Ga0075436_101528156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300006953\|Ga0074063_14138822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1020	Open in IMG/M
3300006954\|Ga0079219_10653141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	786	Open in IMG/M
3300009147\|Ga0114129_11740208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M
3300009162\|Ga0075423_11497213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	724	Open in IMG/M
3300009792\|Ga0126374_10155857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1391	Open in IMG/M
3300010047\|Ga0126382_10723413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	838	Open in IMG/M
3300010047\|Ga0126382_12080882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300010323\|Ga0134086_10014920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2433	Open in IMG/M
3300010336\|Ga0134071_10443760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300010337\|Ga0134062_10212396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	886	Open in IMG/M
3300010359\|Ga0126376_10183493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1715	Open in IMG/M
3300010362\|Ga0126377_10585389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1159	Open in IMG/M
3300010362\|Ga0126377_12229931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300010366\|Ga0126379_13467538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300011107\|Ga0151490_1580647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300012198\|Ga0137364_10138875	All Organisms → cellular organisms → Bacteria	1747	Open in IMG/M
3300012200\|Ga0137382_10178571	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300012208\|Ga0137376_10041036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3739	Open in IMG/M
3300012285\|Ga0137370_10282940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	987	Open in IMG/M
3300012350\|Ga0137372_10503163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	901	Open in IMG/M
3300012358\|Ga0137368_10306387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1072	Open in IMG/M
3300012488\|Ga0157343_1016268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300012908\|Ga0157286_10243204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300012957\|Ga0164303_11331260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300012958\|Ga0164299_10106667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1468	Open in IMG/M
3300012985\|Ga0164308_10727762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	858	Open in IMG/M
3300015359\|Ga0134085_10011034	All Organisms → cellular organisms → Bacteria	3345	Open in IMG/M
3300015371\|Ga0132258_10716032	All Organisms → cellular organisms → Bacteria	2521	Open in IMG/M
3300015371\|Ga0132258_12032013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1445	Open in IMG/M
3300015371\|Ga0132258_13060615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1157	Open in IMG/M
3300015371\|Ga0132258_13124678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1144	Open in IMG/M
3300018051\|Ga0184620_10193651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	673	Open in IMG/M
3300018054\|Ga0184621_10008792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2861	Open in IMG/M
3300018061\|Ga0184619_10338476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	687	Open in IMG/M
3300018482\|Ga0066669_11269925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300019873\|Ga0193700_1053520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300019875\|Ga0193701_1006411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2252	Open in IMG/M
3300020002\|Ga0193730_1008740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2841	Open in IMG/M
3300021078\|Ga0210381_10034630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1441	Open in IMG/M
3300021082\|Ga0210380_10396938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300021510\|Ga0222621_1036552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1018	Open in IMG/M
3300022694\|Ga0222623_10077075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1293	Open in IMG/M
3300025920\|Ga0207649_11176310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300025944\|Ga0207661_10010417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	6691	Open in IMG/M
3300025945\|Ga0207679_10276425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1438	Open in IMG/M
3300025945\|Ga0207679_10475665	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300026116\|Ga0207674_10168385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2145	Open in IMG/M
3300026327\|Ga0209266_1028963	All Organisms → cellular organisms → Bacteria	2957	Open in IMG/M
3300026343\|Ga0209159_1043520	All Organisms → cellular organisms → Bacteria	2267	Open in IMG/M
3300027821\|Ga0209811_10264425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300028708\|Ga0307295_10013345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1966	Open in IMG/M
3300028710\|Ga0307322_10017259	All Organisms → cellular organisms → Bacteria	1641	Open in IMG/M
3300028711\|Ga0307293_10021039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1920	Open in IMG/M
3300028713\|Ga0307303_10031753	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300028716\|Ga0307311_10011644	All Organisms → cellular organisms → Bacteria	2095	Open in IMG/M
3300028718\|Ga0307307_10003979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3755	Open in IMG/M
3300028755\|Ga0307316_10016786	All Organisms → cellular organisms → Bacteria	2310	Open in IMG/M
3300028768\|Ga0307280_10003398	All Organisms → cellular organisms → Bacteria	4028	Open in IMG/M
3300028768\|Ga0307280_10086560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1027	Open in IMG/M
3300028782\|Ga0307306_10032445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1244	Open in IMG/M
3300028784\|Ga0307282_10007945	All Organisms → cellular organisms → Bacteria	4207	Open in IMG/M
3300028791\|Ga0307290_10010591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3115	Open in IMG/M
3300028807\|Ga0307305_10176471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	985	Open in IMG/M
3300028807\|Ga0307305_10490409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300028814\|Ga0307302_10640541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300028824\|Ga0307310_10042024	All Organisms → cellular organisms → Bacteria	1881	Open in IMG/M
3300028875\|Ga0307289_10016837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2807	Open in IMG/M
3300028884\|Ga0307308_10044107	All Organisms → cellular organisms → Bacteria	2092	Open in IMG/M
3300031170\|Ga0307498_10005987	All Organisms → cellular organisms → Bacteria	2194	Open in IMG/M
3300032205\|Ga0307472_101711878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.25%
Host-Associated	Host-Associated	18.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.21%
Plants	Host-Associated → Plants	18.75%
Aquatic	Environmental → Aquatic	8.04%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.50%
Sediment	Environmental → Aquatic → Sediment	6.25%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.25%
Freshwater	Environmental → Aquatic → Freshwater	1.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.50%
Loam	Environmental → Terrestrial → Soil → Loam	10.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.25%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.68%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	24.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.25%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.25%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.36%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.57%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.68%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.79%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012488	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.yng.030610	Host-Associated	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019873	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_07013170	2124908045	Soil	VNVIGIHVDLVLPSFSEQLLSQAAEDAAAAMLMEARGLLLRGWSKGAQARDVRGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSAEAQALADATDVLSRASGTLAIDAWNDAPERNRGDVIAAIDRALSLLHPDQAQAV
F24TB_103988853	3300000550	Soil	LSQAAEDAAAAMLMEARGLLLRGWSKGAQARDVRGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSAEAQALADTTDVLSRASGTLAIDAWNDAPERNRGDVIAAIDRALSLLHPDQAEAV*
JGI10216J12902_1050908902	3300000956	Soil	MEARGLLLRGWSKGAQARESTGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSAEARGLAEATDVLSRATGTLALDPWNDAPERTRSDVIAAVDRALNMLNAEHAQAV*
JGI10216J12902_1242786992	3300000956	Soil	MLTEARGLLDRGWSKGAQARDARGHVVNAWSDDAAAWSLIGALLASWHRHDNRLDADFVAHSVEARALAEATDVLSRATGTLAIDPWNDAPERSRGDVIAAVDRALGLLDHPRAEAV*
Ga0062593_1024937811	3300004114	Soil	MLMEARGLLLRGWSKGAQARDVRGHVVNAWSDEAACWSLVGALLASWHRHDNRLDVDFVAHSAEARGLADATDVLSRASGTFALDPWNDAPERNLGDVVAAVDRALALLEHPHAEAV*
Ga0062591_1015665991	3300004643	Soil	AQTLHSVWRFQWVGRRLLAGSDPVKKAFRCESACYARAREQLLSQAADGTAAAMLTEARGLLLRGWSRCAQARDARGHVVNAWSDEAASWSLVGALLASWHRHDNRLDADFVAHSVEAQALADATAVLTRATGTLAIDPWNDAPERNRSDVIDAVDRALALLDPPHAEAV*
Ga0062591_1020373721	3300004643	Soil	NASPGSDPVERWFAPRLRGTLEEKERLLSQVVEGTAAAMLMEARGLLTRGWSKGAQARDERGHVVNAWSEDAVSWSLIGALLASWHRHDNRLDIDFIAHSAEAQALADATQVLARATGTLAIDPWNDAPERNHGDVLAAVDRAIGLLDRPQAEAV*
Ga0066815_100245692	3300005164	Soil	MLTEARGLLLRGWSKCAQARDLRGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRSDVIAAVDRALALLDHPQAEAV*
Ga0066683_100081615	3300005172	Soil	MLMEARGLLLRGWSKGAQARDGRGQIVNAWSGDAASWSLVGALLASWQRHDDKLDEDFVAHSAEARALSEATQALARTTGTLALDSWNDAPERTRSDVIAAIDRGLSLLHADTAEAV*
Ga0070683_1000675682	3300005329	Corn Rhizosphere	MLTEARGLLLRGWSKGAQARDARGHVVNAWSDDAASWSLIGALLASWHRHDNKLDVDFVAHSAEARGLAEATDVLSRATGTLAIDPWNDAPERNRGDVIAALDRALTLLDRPHAQAV*
Ga0066388_1017945521	3300005332	Tropical Forest Soil	EARGLLLRGWSKGAQARDVRGHVVNAWSDDAACWSLVGALLASWHRHDNRLDVDFVAHSAEARGLADATNVLSRAAGTLALDPWNDAPERNLGDVVSAVDRALALLDHVQAEAV*
Ga0070661_1019257752	3300005344	Corn Rhizosphere	TAAAMLTEARGLLDRGWSKGAQARDARGHVVNAWSDDAAAWSLIGALLASWHRHDNRLDADFVAHSVEARALAEATDVLSRATGTLAIDPWNDAPERSRADVIAAVDRALGLLDHPRAEAV*
Ga0070674_1012516512	3300005356	Miscanthus Rhizosphere	MLTEARGLLLRGWSRCAQARDARGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSAEARALADATDVLGRATGTLAIDPWNDAPERNRSDVIAAVDRALALL
Ga0070711_1002267812	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LSQAADDPAAAMLTEARGLLLRGWSKCAQARDVRGHVVNAWSDEAASWSLVGALLASWHRHDDRLDIDFVAHSIEAQALADATNVLSRATGTLAIDPWNDAPERNRGDVIAAVDRALALLDHPQAEAV*
Ga0066682_104106621	3300005450	Soil	MLMEARGLLLRGWSKGAQARDGRGQIVNAWSGDAASWSLVGALLASWQRHDDKLDEDFVAHSAEARALSEATQALARTTGTLALDSWNDAPERTRSDVIAAIDRGLSLLHGDTAEAV*
Ga0073909_100521982	3300005526	Surface Soil	MLTEARGLLLRGWSKCAQARDLRGHIVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRSDVIAAVDRALALLDHPQAEAV*
Ga0070704_1004306582	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MLTEARGLLLRGWSRCAQARDARGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSAEARALADATDVLGRATGTLAIDPCNDAPERNRSDVIAAVDRALALLEHPQAEAV*
Ga0070664_1000689395	3300005564	Corn Rhizosphere	MLTEARGLLLRGWSRGAQARDARGHVVNAWSDDAASWSLIGALLASWHRHDNKLDVDFVAHSAEARGLAEATDVLSRATGTLAIDPWNDAPERNRGDVIAALDRALTLLDRPHAQAV*
Ga0070664_1004144562	3300005564	Corn Rhizosphere	MLTEARGLLDRGWSKGAQARDARGHVVNAWSDDAAAWSLIGALLASWHRHDNRLDADFVAHSVEARALAEATDVLSRATGTLAIDPWNDAPERSRADVIAAVDRALGLLDHPRAEAV*
Ga0066905_1000357782	3300005713	Tropical Forest Soil	LSQAAADTAAAMLMEARGLLLRGWSKGAQARDDRGHIVNAWNGEAASWSLVGALLATWHRHDDKLDEDFVAHSAEARALSEATQVLSRTTGTLALDPWNDAPERTRGDVITAVDRALSLLNAEHAEAV*
Ga0066905_1000609041	3300005713	Tropical Forest Soil	KHAQARDVRGHVVNAWSDDAASWSLVGALLATWHRHDDKLDADFVAHSAEARALSEATDVLTRATGTLAIDFWNDAPDRNRGEVIDAVDRAVALLDTTQDAA*
Ga0066905_1001310703	3300005713	Tropical Forest Soil	MLMEARGLLLRGWSKGAQAREDTGHVVNAWSDDAASWSLVGALLASWHRHDDRLDADFVAHSAEARGLAEATDVLSRATGTLALDPWNDAPERTRSDVIAAVDRALKLLGTEQAAAV*
Ga0066903_1008708893	3300005764	Tropical Forest Soil	MLMEARGLLLRGWSKGAQARDERGHIVNAWSDEAASWSLIGALLASWHRHDDKLDVDFVAHSAEARALADATAVLSRATGTLAIDPWNDAPERNRGDVLAAVDRALGLLDDLHAEAV*
Ga0066903_1051768651	3300005764	Tropical Forest Soil	EARGLLLRGWSKGAQARDVRGHVVNAWSDDAACWSLVGALLASWHRHDNRLDVDFVAHSAEARALAEATEVLSRAAGTLAIDPWNDAPERNLGDVVAAVDRALALLEHPQAEAV*
Ga0081540_10100014	3300005983	Tabebuia Heterophylla Rhizosphere	MLMEARGLLLRGWSKGAQARDVRGHVVNAWSDDAACWSLVGALLASWHRHDNRLDVDFVAHSAEARGLADATNVLSRAAGTLALDSWNDAPERNLGDVVAAVDRALALLDHVHAEAV*
Ga0075432_100997052	3300006058	Populus Rhizosphere	MGAQARDERGHVVNAWSDEAASWSLVGALLASWHRHDDKLDEDFVAHSAEARALSEATKALARTTGTLALDPWNDARERSRSDVIAAVDRALSLLHADEAEAV*
Ga0070712_1004851792	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRISVLVSAKEQRLSQAADDPAAAMLTEARGLLLRGWSKCAQARDVRGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSIEAQALADATNVLSRATGTLAIDPWNDAPERNRGDVIAAVDRALALLDHPQAEAI*
Ga0074051_116231131	3300006572	Soil	MEICVLPSRQGQLLSQAADDPAAAMLMEARGLLLRGWSKDAQARDMRGHVVNAWSDEASCWSLVGALLASWHRHDDRLDADFIAHSAEARALADATQVLARATGTLAIDLWNDAPERNWGDVIATVDRALVLLDRSQAEAV*
Ga0074053_117546131	3300006575	Soil	MEICVLPSRQGQLLSQAADDPAAAMLMEARGLLLRGWSKDAQARDMRGHVVNAWSDEASCWSLVGALLASWHRHDDRLDADFIAHSVEARALADATQVLARATGTLAIDPWNDAPERNWGDVIAAVDRALALLDRSQAEAV*
Ga0074050_120345632	3300006577	Soil	MLMEARGLILRGWSKGAQARDMRGHVVNPWSDDASCWSLVGALLASWHRHDDRLDADFIAHSVEARALADATEVLARATGTHAIDPWNDAPERNWGDVIAAVDRALALLDRSQAEAV*
Ga0074059_121609642	3300006578	Soil	MLTEARGLLLRGWSKCAQARDLRGHVVNAWSDDAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRSDVIAAVDRALALLDDPQAEAV*
Ga0074049_123373471	3300006580	Soil	AQARDMRGHVVNAWSEEASCWSLVGALLASWHRHDDRLDADFIAHSVEARALADATEVLARATGTHAIDPWNDAPERNWGDVIAAVDRALALLDRSQAEAV*
Ga0074048_133682422	3300006581	Soil	MEICVLPSRQGQLLSQAADDPAAAMLMEARGLLLRGWSKDAQARDMRGHVVNAWSEEASCWSLVGALLASWHRHDDRLDADFIAHSVEARALADATEVLARATGTHAIDPWNDAPERNWGDVIAAVDRALALLDRSQAEAV*
Ga0074064_117128752	3300006603	Soil	RGLLLRGWSKCAQARDLRGHVVNAWSDDAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRSDVIAAVDRALALLDHPQAEAV*
Ga0074062_129451661	3300006606	Soil	MLTEARGLLLRGWSKGAQARDGRGHVVNAWSDDAAAWSLVGALLASWHRHDDRLDADFVAHSAEARALADATNVLSRATGTLAIDPWNDAPERNRGDVIAAVDRALSLLDQ
Ga0075433_108213482	3300006852	Populus Rhizosphere	MLTEARGLLLRGWSRCAQARDARGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSAEARALAEATNVLSRATGTLAIDPWNDAPERNRSDVIAAVDRALALLDHPQAEAV*
Ga0075425_1001929062	3300006854	Populus Rhizosphere	LSQAVEGTAAAMLLEARSLLVRGWSKGAQARDPRGHVVNAWSVDASSWSLIGALLASWHRHDDRLDVDFVAHSVEAQALADATDVLSRATGTLAIDHWNDRPERNRGEVLEAVDRALLLLNRTQAEAV*
Ga0075425_1027088761	3300006854	Populus Rhizosphere	GLACYAPAREQLLSQAAGDSAAAMLTEARGLLLRGWSRCAQARDARGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSAEARALAEATNVLSRATGTLAIDPWNDAPERNRSDVIAAVDRALALLDHPQAEAV*
Ga0075436_1015281562	3300006914	Populus Rhizosphere	SERRSRLLSQAVEGTAAAMLVEARSLLVRGWSKGAQARDPRGHVVNAWSVDASSWSLIGALLASWHRHDDRLDVDFVAHSVEAQALADATDVLSRATGTLAIDHWNDRPERNRGEVLEAVDRALLLLNRTQAEAV*
Ga0074063_141388222	3300006953	Soil	MLTEARGLLLRGWSKCAQARDLRGHVVNAWSDDAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRSDVIAAVDRALALLDHPRAEAV*
Ga0079219_106531411	3300006954	Agricultural Soil	LSQAVEGTAAAMLLEARSLLVRGWSKGAQARDPRGHVVNAWSVDASSWSLIGALLASWHRHDDRLDVDFVAHSVEAQALADATDVLSRATGTLAIDHWNDRPERNRGEVLEAVDRALLLL
Ga0114129_117402082	3300009147	Populus Rhizosphere	MLMEARGLLLRGWSKGAQARDGRGHIVNAWSGDAASWSLVGALLASWHRHDDKLDEDFVAHSAEARALSEATKVLARTSGTLALDPWNDAPGRSRSDVIAAVDRALSLLHADEAEAV*
Ga0075423_114972131	3300009162	Populus Rhizosphere	MLMEARGLLLRGWSKGAQARDGRGHIVNAWSGDAASWSLVGALLASWHRHDDKLDEDFVAHSAEARALSEATKVLARTSGTLALDPWNDAPERTRSDVI
Ga0126374_101558572	3300009792	Tropical Forest Soil	LTEARGLLLRGWSKGAQARDVRGHVVNAWSDDAACWSLVGALLASWHRHDNRLDVDFVAHSAEACGLADATNVLSRAAGTLALDPWNDAPERNLGDVVSAVDRALALLDHVQAEAV*
Ga0126382_107234132	3300010047	Tropical Forest Soil	MLMEARGLLLRGWSKGAQAREDTGHVVNAWSDDAASWSLVGALLASWHRHDDRLDADFVAPSAEARGLAEATDVLSRATGTLALDPWNDAPERTRSDVIAAVDR
Ga0126382_120808821	3300010047	Tropical Forest Soil	MLMEARGLLLRGWSKGAQARDVRGHVVNAWSDRAASWSVVGALLASWHRHDDRLDADFVAHSAEARGLAHATDVLTRATGTLAIDFWNDAPERNRGDVVAAVDRALTLLGGSQAEAV*
Ga0134086_100149203	3300010323	Grasslands Soil	MLMEARGLLLRGWSKGAQARDGRGQIVNAWSGDASSWSLVGALLASWQRHDDKLDEDFVAHSAEARALSEATQVLARTTGTLALDSWNDAPERTRSDVIAAIDRGLSLLHADTAEAV*
Ga0134071_104437602	3300010336	Grasslands Soil	MLMEARGLLLRGWSKGAQARDERGHVVIAWSDEASSWSLVGALLASWHRHDDKLDEDFVAHSAEARALSEATKVLARTSGTLALDPWNDAPERTRSDVIATIDGALSLLHADQAEAV*
Ga0134062_102123962	3300010337	Grasslands Soil	LMEARGLLLRGWSKGAQARDGRGQIVNAWSGDAASWSLVGALLASWQRHDDKLDEDFVAHSAEARALSEATQALARTTGTLALDSWNDAPERTRSDVIAAIDRGLSLLHADTAEAV*
Ga0126376_101834931	3300010359	Tropical Forest Soil	MLTEARGLLLRGWSKGAQARDVRGHVVNAWSDDAACWSLVGALLASWHRHDNRLDVDFVAHSAEARGLADATNVLSRAAGTLALDPWNDAPERNLGDVVSAVDRALALLDHVQAEAV*
Ga0126377_105853892	3300010362	Tropical Forest Soil	MLTEARGLLLRGWSKGAQARDVRGHVVNAWSDDAACWSLVGALLASWHRHDNRLDVDFVAHSAEACGLADATNVLSRAAGTLALDPWNDAPERNLGDVVSAVDRALALLDHVQAEAV*
Ga0126377_122299312	3300010362	Tropical Forest Soil	VDTAAAMLTEARGLLISGWSKHAQARDVRGHVVNAWSDDAASWSLVGALLASWHRHDDRLDADFVAHSAEARGLAEATDVLSRATGTLALDPWNDAPERTRSDVIAAVDRALKLLGTEQAAAV*
Ga0126379_134675381	3300010366	Tropical Forest Soil	MLMEARGLLLRGWSKGAQARDERGHVVNAWSDDAASWSLIGALLASWHRHDDKLDVDFVAHSAEARALADATDVLSRATGTLAIDPWNDAPERNRSDVLSAVDRALALLDHSHAEAV*
Ga0151490_15806471	3300011107	Soil	MLTEARGLLLRGWSKGAQARDVRGHVVNAWSDEASCWSLVGALLASWHRHDDRLDADFIAHSVEARALADATEVLTRATGTHAIDPWNDAPERNWGDVIAAVDRALALLDRSQAEAV*
Ga0137364_101388751	3300012198	Vadose Zone Soil	SFSEQLLSQAAADTAAAMLMEARGLLLRGWSKYAQARDVRGHVVNAWSDDAASWSLVGALLASWHRHDDRLDADFVAHSAEARALADATNVLSRATGTLAIDPWNDAPERNRTDVIAAVDRALALLDDPQAEAV*
Ga0137382_101785712	3300012200	Vadose Zone Soil	MAAAMLTEARGLLLRGWSKCAQARDVRGHVVNAWSDDAASGSRIGALLASWHRHDDRLDADFVAHSAEARALADATDVLSRATGTLAIEHWNDAPERNRTDVIAAVDRALALLDDPQAEAV*
Ga0137376_100410362	3300012208	Vadose Zone Soil	LSQAADGTAAALLTEARGLLLRGWSKYAQARDVRGHVVNAWSDDAASWSLVGALLASWHRHDDRLDADFVAHSAEARALADATNVLSRATGTLAIDPWNDAPERNRSDVIDAVDRALALLDDPQAEAV*
Ga0137370_102829402	3300012285	Vadose Zone Soil	QGLTPLRSRFAADLRATLLPGSGLLSQAADGTAAALLTEARGLLLRGWSKYAQARDVRGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSAEARALADATNVLSRATGTLAIDPWNDAPERNRTDVIAAVDRALALLDDPQAEAV*
Ga0137372_105031631	3300012350	Vadose Zone Soil	MLMEARGLLLRGWSKGAQARDGRGHIVNAWRGDAASWSLVGALLASWHRHDDKLDEDFVAHSAEARALSEATQVLARTTGAPALDPWNDAPERTRSDVIAAIDRGLSLLHADQAEAV*
Ga0137368_103063871	3300012358	Vadose Zone Soil	MEARGLLLRGWSKDAQARDGRGHIVNAWSGDAASWSLVGALLASWHRHDDKLDEDFVAHSAEARALSEATKVLARTSGTLALDSWNDAPERTRSDVIAAVDRALSLLHPDQAEAV*
Ga0157343_10162682	3300012488	Arabidopsis Rhizosphere	GQLSQAADDTAAAMLMEARGLLLRGWSKGAQARDERGHIVNAWSDEAASWSLIGALLASWHRHDDKLDVDFVAHSAEARALADATDVLSRSTGTLAIDPWNDAPERNRSDVLAAVDRALALLDHSHAEAV*
Ga0157286_102432042	3300012908	Soil	ARGLLLRGWSRCAQARDARGHVVNAWSDEAASWSLVGALLASWHRHDNRLDADFVAHSVEAQALADATAVLTRATGTLAIDPWNDGPERNRSDVIARSTAD*
Ga0164303_113312601	3300012957	Soil	MLTEARGLLLRGWSKCAQARDLRGHIVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRSDVIAAVDRALALL
Ga0164299_101066672	3300012958	Soil	MLMEARGLLTRGWSKGAQARDERGHVVNAWSEDAVSWSLIGALLASWHRHDNRLDIDFIAHSAEAQALADATQVLARATGTLAIDPWNDAPERNHGDVLAAVDRAIGLLDPPQAEAV*
Ga0164308_107277622	3300012985	Soil	MLMEARGLLTRGWSKGAQARDERGHVVNAWSEDAVSWSLIGALLASWHRHDNRLDIDFIAHSAEAQALADATQVLARATGTLAIDPWNDAPERNHGDVLAAVDRAIGLLDRPQAEAV*
Ga0134085_100110344	3300015359	Grasslands Soil	MLMEARGLLLRGWSKGAQARDGRGQIVNAWSGDAASWSLVGALLSSWQRHDDKLDEDFVAHSAEARALSEATQALARTTGTLALDSWNDAPERTRSHVIAAIDRGLSLLHADTAEAV*
Ga0132258_107160323	3300015371	Arabidopsis Rhizosphere	MLTEARGLLLRGWSKGAQARDVRGHVVNAWSDDAAAWSLVGALLASWHRHDDRLDADFVAHSAKARALADATNVLSRATGTLAIDPWNDAPERSWGDVIAAVDRALALLDRPQAEAV*
Ga0132258_120320132	3300015371	Arabidopsis Rhizosphere	MLMEARGLLLRGWSKGAQARDERGHIVNAWSDEAASWSLIGALLASWHRHDDKLDVDFVAHSAEARALADATDVLSRSTGTLAIDPWNDAPERNRSDVLAAVDRALALLDHSHAEAV*
Ga0132258_130606152	3300015371	Arabidopsis Rhizosphere	MRISVLVSAKEQRLSQAADDPAAAMLTEARGLLLRGWSKCAQARDVRGHVVNAWSDEAASWSLVGALLASWHRHDDRLDIDFVAHSIEAQALADATNVLSRATGTLAIDPWNDAPERNRGDVIAAVDRALALLDHPHAEAI*
Ga0132258_131246782	3300015371	Arabidopsis Rhizosphere	RGWSKGAQARDERGHVVNAWSGDASSWSLVGALLASWHRHDNRLDIDFVAHSAEAQALADATQVLTRATGTLAIDPWNDAPERNHGDVIAAVDRAIELLDRTHAEAV*
Ga0184620_101936512	3300018051	Groundwater Sediment	RGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERRRGDVIAAVDRALALLDDPRAEAV
Ga0184621_100087921	3300018054	Groundwater Sediment	LLRGWSKCAQARDVRGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRSDVIDAVDRALALLDHPQAEAV
Ga0184619_103384762	3300018061	Groundwater Sediment	RISVLLSHEEQLLSQAADATAAAMLTEARGLLLRGWSKCAQARDVRGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRGDVIDAVDRALALLDHPQAEAV
Ga0184624_100381502	3300018073	Groundwater Sediment	VVNAWSAEAASWSLVGALLASWHRHDDGLDADFVAHSVEAQALADATAVLSRATGTLAIDPWNDAPERNRSDVIDAVDRALALLDHPQAEAV
Ga0066669_112699251	3300018482	Grasslands Soil	GSTDDGASLSSHTLSSTGSDPFRSGFCVLPSFSEQLLSQAAADTAAAMLMEARGLLLRGWSKGAQARDGRGQIVNAWSGEAAAWSLVGSLLASWHRHDDKLDEDFVAHSAEARALSEATQVLARTTGTLALDSWNDAPERTRSDVIAAIDRGLSLLHGDTAEAV
Ga0193700_10535201	3300019873	Soil	AAMLTEARGLLLRGWSKCAQARDVRGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRGDVIDAVDRALALLDHPQAEAV
Ga0193701_10064114	3300019875	Soil	LLATLAPGATFVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRSDVIDAVDRALALLDHPQAEAV
Ga0193730_10087404	3300020002	Soil	MLTEARGLLLRGWSKCAQARDVRGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRSDVIDAVDRALALLDHPQAEAV
Ga0210381_100346302	3300021078	Groundwater Sediment	LAADFFTGSDPVKARDVRGHVVNAWSDEAASWSLVGALLASWHRHDHRLDADFVAHSAEAQALADATAVLSRATGTLAIDPWNDAPERNRSDVIDAVDRALALLDHPQAEAV
Ga0210380_103969382	3300021082	Groundwater Sediment	LSQAADDTAAAMLTEARGLLLRGWSRCAQARDVQGHVVNAWSVEAASWSLVGALLASWHRHDDRLDADFVAHSVEARALADATDVLSRATGTLAIDPWNDAPERSRGDVIA
Ga0222621_10365522	3300021510	Groundwater Sediment	MLTEARGLLLRGWSKCAQARDVRGHVVNAWSDEAASWSLVGALLTSWHRHDDRLDADFVAHSVEAQALADATDVLTRATGTLAIDPWNDAPERSRGDVIAAVDRAL
Ga0222623_100770752	3300022694	Groundwater Sediment	LAADFFTGSDPVKARDARGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEARALADATDVLSRATGTLAIDPWNDAPERSRGDVIAAVDRALALLDHPQAEAV
Ga0222622_104565722	3300022756	Groundwater Sediment	VNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRGDVIDAVDRALALLDHPQAEAV
Ga0207649_111763101	3300025920	Corn Rhizosphere	VLVSDEGGLLSLAAEHTAAAMLTEARGLLDRGWSKGAQARDARGHVVNAWSDDAAAWSLIGALLASWHRHDNRLDADFVAHSVEARALAEATDVLSRATGTLAIDPWNDAPERSRADVIAAVDRALGLLDHPRAEAV
Ga0207661_100104175	3300025944	Corn Rhizosphere	MLTEARGLLLRGWSRGAQARDARGQVVNAWSDDAASWSLIGALLASWHRHDNKLDVDFVAHSAEARGLAEATDVLSRATGTLAIDPWNDAPERNRGDVIAALDRALTLLDRPHAQAV
Ga0207679_102764252	3300025945	Corn Rhizosphere	MLTEARGLLLRGWSRGAQARDARGHVVNAWSDDAASWSLIGALLASWHRHDNKLDVDFVAHSAEARGLAEATDVLSRATGTLAIDPWNDAPERNRGDVIAALDRALTLLDRPHAQAV
Ga0207679_104756652	3300025945	Corn Rhizosphere	MLTEARGLLDRGWSKGAQARDARGHVVNAWSDDAAAWSLIGALLASWHRHDNRLDADFVAHSVEARALAEATDVLSRATGTLAIDPWNDAPERSRGDVIAAVDRALGLLDHPRAEAV
Ga0207674_101683853	3300026116	Corn Rhizosphere	MLTEARGLLDRGWSKGAQARDARGHVVNAWSDDAAAWSLIGALLASWHRHDNRLDADFVAHSVEARALAEATDVLSRATGTLAIDPWNDAPERSRADVIAAVDRALGLLDHPRAEAV
Ga0209266_10289631	3300026327	Soil	MEARGLLLRGWSKGAQARDGRGQIVNAWSGDAASWSLVGALLASWQRHDDKLDEDFVAHSAEARALSEATQALARTTGTLALDSWNDAPERTRSDVIAAIDRGLSLLHADTAEAV
Ga0209159_10435203	3300026343	Soil	MLMEARGLLLRGWSKGAQARDGRGQIVNAWSGDAASWSLVGALLASWQRHDDKLDEDFVAHSAEARALSEATQALARTTGTLALDSWNDAPERTRSDVIAAIDRGLSLLHADTAEAV
Ga0209811_102644252	3300027821	Surface Soil	MLTEARGLLLRGWSKCAQARDLRGHIVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRSDVIAA
Ga0307295_100133454	3300028708	Soil	RDARGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRSDVIDAVDRALALLDHPQAEAV
Ga0307322_100172592	3300028710	Soil	LSQAADDTAAAMLTEARGLLLRGWSKCAQARDVRGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRSDVIDAVDRALALLDHPQAEAV
Ga0307293_100210392	3300028711	Soil	MLTEARGLLRGWSKCAQARDVRGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRSDVIDAVDRALALLDHPQAEAV
Ga0307303_100317532	3300028713	Soil	LAADFFTGSDPVKARDARGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRSDVIDAVDRALALLDHPQAEAV
Ga0307311_100116441	3300028716	Soil	QARDVRGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRGDVIDAVDRALALLDHPQAEAV
Ga0307307_100039794	3300028718	Soil	LAADFFTGSDPVKARDVRGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRGDVIDAVDRALALLDHPQAEAV
Ga0307316_100167861	3300028755	Soil	ARDVRGHVVNAWSDEAASWSLVGALLTSWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRGDVIDAVDRALALLDHPQAEAV
Ga0307280_100033981	3300028768	Soil	VRPRSKGVAIVERDTRRRSPARGGSNGLAADFFTGSDPVKARDARGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRSDVIDAVDRALALLDHPQAEAV
Ga0307280_100865602	3300028768	Soil	MLTEARGLLRGWSKCAQARDVRGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATNVLSRATGTLAIDPWNDAPERRRGDVIAAVDRALALLDD
Ga0307306_100324451	3300028782	Soil	VVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRSDVIDAVDRALALLDHPQAEAV
Ga0307282_100079451	3300028784	Soil	LAADFFTGSDPVKARDVRGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRSDVIDAVDRALALLDHPQAEAV
Ga0307290_100105911	3300028791	Soil	DDTAAAMLTEARGLLLRGWLKCAQARDARGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRSDVIDAVDRALALLDHPQAEAV
Ga0307281_100669472	3300028803	Soil	VVNAWSAEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATAVLSRATGTLAIDPWNDAPERNRSDVIDAVDRALALLDHPQAEAV
Ga0307305_101764711	3300028807	Soil	MLMEVRGLLLRGWSKGAQARDGRGHIVNAWSGDAASWSLVGALLASWHRHDDKLDEDFVAHSAEARALSEATKVLARTSGTLALDPWNDAPERTRV
Ga0307305_104904091	3300028807	Soil	AAAMLTEARGLLLRGWSRCAQARDVRGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSAEARALADATNVLSRATGTLAIDPWNDAPERSRGDVIAAVDRALALLDDPQAEAV
Ga0307302_106405411	3300028814	Soil	LLPSCQEQLLSQAADDTAAAILTEARGLLLRGWSKCAHARDVRGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWND
Ga0307310_100420241	3300028824	Soil	DFFTGSDPVKARDARGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRSDVIDAVDRALALLDHPQAEAV
Ga0307289_100168374	3300028875	Soil	MLTEARGLLLRGWSKCAQARDVRGHVVNAWSDEAASWSLVGALLTSWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRGDVIDAVDRALALLDHPQAEAV
Ga0307308_100441071	3300028884	Soil	MLTEARGLLLRGWLKCAQARDARGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATDVLSRATGTLAIDPWNDAPERNRSDVIDAVDRALALLDHPQAEAV
Ga0307498_100059871	3300031170	Soil	SRFAADFACYPAAKEQLLSQAADGMAAAMLTEARGLLLRGWSRCAQARDVRGHVVNAWSDEAASWSLVGALLASWHRHDDRLDADFVAHSVEAQALADATAVLSRATGTLAIDPWNDAPERSRGDVIAAVDRALALLDDPQAEAV
Ga0307472_1017118782	3300032205	Hardwood Forest Soil	MLMEARGLLLRGWSKGAQARDVRGHVVNAWSDDAACWSLVGALLASWHRHDNRLDVDFVAHSEEARGLADATKVLSRASGTLALDPWNDAPERNLGDVVAAVDRALALLEHPHAEAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084544

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences