Metagenome / Metatranscriptome Family F084528

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084528
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	130 residues
Representative Sequence	MQGTVLAETEAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS
Number of Associated Samples	83
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	61.61 %
% of genes near scaffold ends (potentially truncated)	49.11 %
% of genes from short scaffolds (< 2000 bps)	83.04 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (23.214 % of family members)
Environment Ontology (ENVO)	Unclassified (48.214 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.179 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Mixed	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.06% β-sheet: 5.70% Coil/Unstructured: 39.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF13650	Asp_protease_2	11.61
PF13975	gag-asp_proteas	10.71
PF05951	Peptidase_M15_2	3.57
PF01464	SLT	3.57
PF00589	Phage_integrase	0.89
PF00027	cNMP_binding	0.89
PF13340	DUF4096	0.89
PF05930	Phage_AlpA	0.89
PF12728	HTH_17	0.89
PF05717	TnpB_IS66	0.89
PF05443	ROS_MUCR	0.89
PF13411	MerR_1	0.89
PF03772	Competence	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG3108	Uncharacterized conserved protein YcbK, DUF882 family	Function unknown [S]	3.57
COG0658	DNA uptake channel protein ComEC, N-terminal domain	Intracellular trafficking, secretion, and vesicular transport [U]	0.89
COG3311	DNA-binding transcriptional regulator AlpA	Transcription [K]	0.89
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.89
COG4957	Predicted transcriptional regulator	Transcription [K]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	94.64 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.68 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	92.86 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.68 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	88.39 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.57 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.68 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	88.39 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	2.68 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.79 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	88.39 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	2.68 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.79 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	88.39 %
unclassified Azospirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum	2.68 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	1.79 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	88.39 %
Azospirillum sp. B4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B4	2.68 %
Amycolatopsis orientalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis orientalis	1.79 %
unclassified Arthrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	88.39 %
Azospirillum sp. B4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B4	2.68 %
Amycolatopsis orientalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis orientalis	1.79 %
Arthrobacter sp. TB 26	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. TB 26	0.89 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_118001181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300002568\|C688J35102_119981999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	835	Open in IMG/M
3300002568\|C688J35102_120845146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1791	Open in IMG/M
3300004081\|Ga0063454_100830370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	719	Open in IMG/M
3300004114\|Ga0062593_103202507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300004156\|Ga0062589_100058093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2215	Open in IMG/M
3300005175\|Ga0066673_10094768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1593	Open in IMG/M
3300005175\|Ga0066673_10170333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1225	Open in IMG/M
3300005177\|Ga0066690_10006572	All Organisms → cellular organisms → Bacteria	5565	Open in IMG/M
3300005179\|Ga0066684_10025628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B4	3138	Open in IMG/M
3300005184\|Ga0066671_10091546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B4	1665	Open in IMG/M
3300005184\|Ga0066671_10283627	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300005184\|Ga0066671_10475987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	801	Open in IMG/M
3300005184\|Ga0066671_10503227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	778	Open in IMG/M
3300005184\|Ga0066671_10796303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300005187\|Ga0066675_10904465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. TB 26	667	Open in IMG/M
3300005187\|Ga0066675_10918913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	661	Open in IMG/M
3300005290\|Ga0065712_10658067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis orientalis	564	Open in IMG/M
3300005332\|Ga0066388_100990215	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300005355\|Ga0070671_100703578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	877	Open in IMG/M
3300005436\|Ga0070713_100608752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1038	Open in IMG/M
3300005450\|Ga0066682_10377979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	910	Open in IMG/M
3300005454\|Ga0066687_10119080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1358	Open in IMG/M
3300005539\|Ga0068853_101748022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis orientalis	603	Open in IMG/M
3300005556\|Ga0066707_10442571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	844	Open in IMG/M
3300005560\|Ga0066670_10017086	All Organisms → cellular organisms → Bacteria → Proteobacteria	3281	Open in IMG/M
3300005560\|Ga0066670_10868286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	548	Open in IMG/M
3300005576\|Ga0066708_10231901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1168	Open in IMG/M
3300005586\|Ga0066691_10281302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	980	Open in IMG/M
3300006031\|Ga0066651_10278063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	890	Open in IMG/M
3300006031\|Ga0066651_10610985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300006032\|Ga0066696_10116042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B4	1631	Open in IMG/M
3300006032\|Ga0066696_10623389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	698	Open in IMG/M
3300006032\|Ga0066696_10850645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300006046\|Ga0066652_101407267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	652	Open in IMG/M
3300006175\|Ga0070712_101257451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	644	Open in IMG/M
3300006804\|Ga0079221_10712888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	701	Open in IMG/M
3300007788\|Ga0099795_10267156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	743	Open in IMG/M
3300009137\|Ga0066709_100343996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2046	Open in IMG/M
3300009137\|Ga0066709_100917986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1277	Open in IMG/M
3300010045\|Ga0126311_10555902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	904	Open in IMG/M
3300010046\|Ga0126384_11639550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	607	Open in IMG/M
3300010048\|Ga0126373_11061548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	876	Open in IMG/M
3300010320\|Ga0134109_10011570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2549	Open in IMG/M
3300010320\|Ga0134109_10448872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300010321\|Ga0134067_10000472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7589	Open in IMG/M
3300010321\|Ga0134067_10367491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	570	Open in IMG/M
3300010326\|Ga0134065_10178411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	758	Open in IMG/M
3300010333\|Ga0134080_10362416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	663	Open in IMG/M
3300010337\|Ga0134062_10002734	All Organisms → cellular organisms → Bacteria → Proteobacteria	6145	Open in IMG/M
3300010360\|Ga0126372_11581999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	694	Open in IMG/M
3300010361\|Ga0126378_13019591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	536	Open in IMG/M
3300010371\|Ga0134125_11865903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	653	Open in IMG/M
3300010376\|Ga0126381_102628719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	720	Open in IMG/M
3300010376\|Ga0126381_103448748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300010396\|Ga0134126_10195457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2423	Open in IMG/M
3300010397\|Ga0134124_12225169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300010398\|Ga0126383_12377140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	615	Open in IMG/M
3300012199\|Ga0137383_10110579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2000	Open in IMG/M
3300012201\|Ga0137365_10327847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1133	Open in IMG/M
3300012210\|Ga0137378_11117193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	703	Open in IMG/M
3300012212\|Ga0150985_101807896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	732	Open in IMG/M
3300012212\|Ga0150985_122559134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2111	Open in IMG/M
3300012469\|Ga0150984_100506238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1543	Open in IMG/M
3300012469\|Ga0150984_105382942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	802	Open in IMG/M
3300012469\|Ga0150984_113654741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300012469\|Ga0150984_116345500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300012683\|Ga0137398_10933222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	604	Open in IMG/M
3300012924\|Ga0137413_10134381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1594	Open in IMG/M
3300012925\|Ga0137419_11984467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300012977\|Ga0134087_10409013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	662	Open in IMG/M
3300012984\|Ga0164309_10415971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1007	Open in IMG/M
3300013100\|Ga0157373_10946119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641	Open in IMG/M
3300015262\|Ga0182007_10011627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3421	Open in IMG/M
3300015357\|Ga0134072_10201579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	689	Open in IMG/M
3300015371\|Ga0132258_13273496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1115	Open in IMG/M
3300015372\|Ga0132256_101180287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	879	Open in IMG/M
3300018431\|Ga0066655_10102846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1605	Open in IMG/M
3300018431\|Ga0066655_11132430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300018433\|Ga0066667_10003131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6753	Open in IMG/M
3300018433\|Ga0066667_12109636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300018468\|Ga0066662_10113286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1958	Open in IMG/M
3300018468\|Ga0066662_10436136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1167	Open in IMG/M
3300018468\|Ga0066662_10442223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1161	Open in IMG/M
3300018468\|Ga0066662_11161278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	778	Open in IMG/M
3300018468\|Ga0066662_11203342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	767	Open in IMG/M
3300018482\|Ga0066669_10135583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1783	Open in IMG/M
3300018482\|Ga0066669_10432166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1125	Open in IMG/M
3300018482\|Ga0066669_10634286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	939	Open in IMG/M
3300025915\|Ga0207693_10813350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	720	Open in IMG/M
3300025916\|Ga0207663_10647367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	834	Open in IMG/M
3300025928\|Ga0207700_10435297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1154	Open in IMG/M
3300025931\|Ga0207644_11713993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300026309\|Ga0209055_1030667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2462	Open in IMG/M
3300026316\|Ga0209155_1006798	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5082	Open in IMG/M
3300026527\|Ga0209059_1256112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300026530\|Ga0209807_1043959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2091	Open in IMG/M
3300026550\|Ga0209474_10594660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	565	Open in IMG/M
3300026555\|Ga0179593_1172714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2205	Open in IMG/M
3300027765\|Ga0209073_10002817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3915	Open in IMG/M
3300027903\|Ga0209488_10147178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1777	Open in IMG/M
3300027903\|Ga0209488_10352137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1095	Open in IMG/M
3300030990\|Ga0308178_1028103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	942	Open in IMG/M
3300030991\|Ga0073994_10019175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1784	Open in IMG/M
3300031058\|Ga0308189_10127654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	844	Open in IMG/M
3300031095\|Ga0308184_1033871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300031096\|Ga0308193_1096767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300031099\|Ga0308181_1095273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	636	Open in IMG/M
3300031114\|Ga0308187_10244557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	649	Open in IMG/M
3300031152\|Ga0307501_10178760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	594	Open in IMG/M
3300031421\|Ga0308194_10069039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	950	Open in IMG/M
3300031754\|Ga0307475_10125968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2021	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.50%
Host-Associated	Host-Associated	12.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.50%
Plants	Host-Associated → Plants	12.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.46%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.89%
Loam	Environmental → Terrestrial → Soil → Loam	11.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.89%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	35.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.82%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.21%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	12.50%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.04%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.04%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	6.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.46%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	3.57%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.79%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031095	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_158 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031096	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1180011811	3300002568	Soil	MDSTVLAETEAFIARQREALINQREELLNQQRVVQDQLDQLDVMLTKFDVFDGKQARGRKQSRSAKGGGGSGRRGSKRDELLRVIRDGHGLTRGEILEKMGLKGNKSGEMSVSNALTALT
C688J35102_1199819991	3300002568	Soil	MQGTVLAETEAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS*
C688J35102_1208451462	3300002568	Soil	MQGTVLAETEAFITKQRESLLTQRQELLNQQQAIQAQLDELDEMLTKFDVFEGKQARKGRDRRTSGARRGSRRDELLKLITGSKGLSRGEILEKMGLKGNKAGEMSVSNALTALTKSKQVARRDRKYVAG*
Ga0063454_1008303701	3300004081	Soil	ERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQPPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS*
Ga0062593_1032025071	3300004114	Soil	TTIVVQAAEGEMQGTVLAETEAFIAKQREALLNERQEMVNQQRALQAQLDELDGMLAKFDVFEGKAAQPTPTRRKRSGHRGSRREELLSIINQSHGLSRGEILDKMGLKGNKTGEMSVSNALTALTKSKQVIRRDRKYIAS*
Ga0062589_1000580932	3300004156	Soil	MQGTVLAETEAFIAKQREALLNERQEMVNQQRALQAQLDELDGMLAKFDVFEGKAAQPTPTRRKRSGHRGSRREELLSIINQSHGLSRGEILDKMGLKGNKTGEMSVSNALTALTKSKQVIRRDRKYIAS*
Ga0066673_100947683	3300005175	Soil	MQGTVVAETEAFIAKQREALLSQRQEILRQQRALQAQLDELDLMLAKFDVFEGKQARQAPPRRRSSGRRGSRREELLRIIKQSHGLTRGEILEKMGLKGNKSGEMSVSNALTALTKKKQVSRQDRKYLAS*
Ga0066673_101703331	3300005175	Soil	MDSTVLAETEQFIARQREALLNQRQEILNKQKELDAELEKVDQMLTKFDVFEGKAASRRSTGTTRRSSGRRGSRREGILSIIREAGGLTRGEILEKMGLKGNKSGEMSVSNALTALTKGNQVRRDQNRKYVAA*
Ga0066690_100065723	3300005177	Soil	VQAVQKNYNAVQTAEGEMQGTVLAETEAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS*
Ga0066684_100256283	3300005179	Soil	MQGTVVAETEAFIAKQREALLSQRQEILSQQRALQAQLDELDLMLAKFDVFEGKQARQAPPRRRSSGRRGSRREELLRIIKQSHGLTRGEILEKMGLKGNKSGEMSVSNALTALTKKKQVSRQDRKYLAS*
Ga0066671_100915463	3300005184	Soil	MQGTVVAETEAFIAKQREALLSQRQEILSQQRALQAQLDELDLMLAKFDVFEGKQARQAPPRRRSSGRRGSRREELLRIIKQSHGLTRGEILEKMGLKGNKSGEMSVSNALTALTKKKQVSRRDRKYLAS*
Ga0066671_102836272	3300005184	Soil	MDSTVLAETEAFIARQREALINQREELLNQQRVLQDQLDQLDVMLTKFDVFEGKQARGRKQTRSSKGGASGRRGSKRDELLRVIRDGHGLTRGEILEKMGLKGNKSGEMSVSNALTALTKNNHVRRDGRKYLSA*
Ga0066671_104759872	3300005184	Soil	VLSETEAFIARQRETLLNQRQEILNQQQALQMQLDELDAMLAKFDVFEGKPARQAQPRQRATARRGSRREELLRLIKQSHGLSRGEILEKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYIAS*
Ga0066671_105032272	3300005184	Soil	MQTSVLAETEAFIAKQRESLLTQRQELLAQQQTIQAQIDELDVMLTKFDVFEGKQGPKGGTRRPGGGRRGSRREELLKLIAGSKGLSRGEILEKIGLKGNKAGEMSVSNALTALTKSNQIARRDRKYVAA*
Ga0066671_107963031	3300005184	Soil	MQTTVLADTEAFITKQRESLLTQRKELESQQQAIQAQIDELDVMLSKFDVFEGKARQPRARRSGARRGSRREELLKLISSNKGLSRGEILEQLGLKGNKAGEMSVSNALTALTKGKQVARKDRKYVAA*
Ga0066675_109044651	3300005187	Soil	MDSTVLAETEAFIARQREALINQREELLNQQRALQDQLDQLDVMLTKFDVFEGKQARGRKQTRSSKGGGGSGRRGSKRDELLRVIRDGHGLTRGEILEKMGLKGNKSGEMSVSN
Ga0066675_109189131	3300005187	Soil	MQGSVLAETEAFIAKQREALLKERQEIVNQQRALQAQLEQLDGMLAKFDVFEGKAAQQAPTRRKRSGDRGSRREELLRIINESHGLSRGEILDRMGLKGNKSGEMSVSNALTALTKSKQV
Ga0065712_106580671	3300005290	Miscanthus Rhizosphere	MQGTVLAETEAFIAKQREALFNERQEMVNQQRALQAQLDELDGMLAKFDVFEGKAAQPTPTRRKRSGHRGSRREELLSIINQSHGLSRGEILDKMGLKGNKTGEMSVSNALTALTKSKQVIRRDRKYIAS*
Ga0066388_1009902152	3300005332	Tropical Forest Soil	MQGTVLAETEAFIAKQREALLAERQEILNQQLALQAQLDELDGMLARFDVFAGKPGQESQDRGRRSSRRGSRREELLRIIKQSQGLARGEILEKMGLKGNKSGEMSVSNALTALTKSKQIARQDREYVAN*
Ga0070671_1007035781	3300005355	Switchgrass Rhizosphere	VVQAAEGEMQGTVLAETEAFIAKQREALLNERQEMVNQQRALQAQLDELDGMLAKFDVFEGKAAQPTPTRRKRSGHRGSRREELLSIINQSHGLSRGEILDKMGLKGNKTGEMSVSNALTALTKSKQVIRRDRKYIAS*
Ga0070713_1006087522	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MESTIVAETEAFIARQREALLNQRQELLNQQRALQEQLDHLDEMLTKFDVFEGKYANRGRASTRRASRSRRASRREALLQVIREGNGLTRGEILERLGLKGNKTGEMSVSNALTALTRSNQLRRDGRRYLSA*
Ga0066682_103779792	3300005450	Soil	EMQGTVLAETEAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS*
Ga0066687_101190803	3300005454	Soil	MQGTVLADTEAFITKQREALLNERQEMVNQQRVLQAQLDELDGMLAKFDVFEGKAAPQAPTRRKRSSPRGSRREELLRIINQSHGLSRGEILDKMGLKGNKTGEMSVSNALTALTKSKQVIRRDRKYIAS*
Ga0068853_1017480221	3300005539	Corn Rhizosphere	MQDTVLAETEAFIAKQREALLNERQEMVNQQRALQAQLDELDGMLAKFDVFEGKAAQPTPTRRKRSGHRGSRREELLSIINQSHGLSRGEILDKMGLKGNKTGEMSVSNAL
Ga0066707_104425711	3300005556	Soil	YNAVQTAEGEMQGTVLAETEAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS*
Ga0066670_100170862	3300005560	Soil	MQGTVVAETEAFIAKQREALLSQRQEILRQQRALQAQLDELDLMLAKFDVFEGKQARQAPPRRRSSGRRGSRREELLRIIKQSHGLTRGEILEKMGLKGNKSGEMSVSNALTALTKKKQVSRRDRKYLAS*
Ga0066670_108682861	3300005560	Soil	MDSTVLAETEAFIARQREALINQREELLNQQRALQDQLDQLDVMLTKFDVFEGKQARGRKQTRSSKGGGGSGRRGSKRDELLRVIRDGHGLTRGEILEKMELKGNKSGEMSVSNALTALTKNN
Ga0066708_102319011	3300005576	Soil	KNYNAVQTAEGEMQGTVLAETEAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS*
Ga0066691_102813021	3300005586	Soil	QEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS*
Ga0066651_102780631	3300006031	Soil	MQTSVLAETEAFIAKQRESLLTQRQELLAQQQTIQAQIDELDVMLTKFDVFEGKQGPKGGTRRPGGGRRGSRREELLKLIAGSKGLSRGEILEKIGLKGNKAGEMSVSNALTTLTKSNQIARRDRKYVAA*
Ga0066651_106109852	3300006031	Soil	MDSTVLAETEQFIARQREALLNQRQEILNKQKELDAELEKVDQMLTKFDVFEGKAASRRSTGTTRRSSGRRGSRREGILSIIREAGGLTRGEILEKMGLKGNKSGEMSV
Ga0066696_101160423	3300006032	Soil	KQREALLSQRQEILSQQRALQAQLDELDLMLAKFDVFEGKQARQAPPRRRSSGRRGSRREELLRIIKQSHGLTRGEILEKMGLKGNKSGEMSVSNALTALTKKKQVSRRDRKYLAS*
Ga0066696_106233891	3300006032	Soil	MDSTVLAETEAFIARQREALINQREELLSQQRAVQDQLDQLAEMLTKFDVFEGKQSGGRKQTRSSKGRGGSGRRGSKRDELLRVIRDGHGLTRGEILEKMGLKGNKSGEMSVSN
Ga0066696_108506451	3300006032	Soil	MDSTVLAETEQFIARQREALLNQRQEILNKQKELDAELEKVDQMLTKFDVFEGKAASRRSTGTTRRSSGRRGSRREGILSIIREAGGLTRGEILEKMGLKGNKSGEMSVSNALTALTKGNQVRRDENRKYVAA*
Ga0066652_1014072671	3300006046	Soil	MQGTVLAETEAFITKQRESLLTQRQELLNQQQAIQAQLDELDKMLTKFDVFEGKQARKGRDRRTSGARRGSRRDELLKLITGSKGLSRGEILEKMGLKGNKAGEMSVSNALTALTKSKQVARRDRKYVA
Ga0070712_1012574511	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MQGTVLAETEAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGDKSGEMSVSNALTALTK
Ga0079221_107128881	3300006804	Agricultural Soil	MQGTVLADTEAFIAKQREALLNERQEMVNQQRALQAQLDELDGMLAKFDVFEGKAAQPTPTRRKRSGHRGSRREELLSIINQSHGLSRGEILDKMGLKGNKTGEMSVSNALTALTKSKQVIRRDRKYIPS*
Ga0099795_102671561	3300007788	Vadose Zone Soil	MDSTILAETEAFIARQREALINQREELLNQQRVVQDQLDQLDVMLTKFDVFEGKQARGRKQTRSSKGGGGAGRRGSKRDELLRVIRDGHGLTRGEILEKMGLKGNKSGEMSVSNALTALTKNNHVRRDGRKYLAA*
Ga0066709_1003439961	3300009137	Grasslands Soil	VQAVQKNYNAVQTAEGEMQGTVLAETEAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTAL
Ga0066709_1009179862	3300009137	Grasslands Soil	MKGEGVKLQFLYRLRRANMQGTVVAETEAFIAKQREALLSQRQEILRQQRALQAQLDELDLMLAKFDVFEGKQARQAPPRRRSSGRRGSRREELLRIIKQSHGLTRGEILEKMGLKGNKSGEMSVSNALTALTKKKQVSRQDRKYLAS*
Ga0126311_105559022	3300010045	Serpentine Soil	MDSTVLAETEAFIARQREALINQREELLNQQRGLQDQLDQLDVMLTKFDVFEGKQARGRKQTRSSKGGGGGTGRRGSKRDELLRVIRDGHGLTRGEILEKMGLKGNKSGEMSVSNALTALTKNNHVRRDGRKYLAG*
Ga0126384_116395502	3300010046	Tropical Forest Soil	QTAEGEMQGTVLAETEAFIAKQREALLAERQEILNQQLALQTQLDELDGMLARFDVFEGKPGQQAQNRGGRSGRRGSRREELLRIIKQSQGLARGEILEKMGLKGNKSGEMSVSNALTALTKSKQIVRRDRKYVAN*
Ga0126373_110615481	3300010048	Tropical Forest Soil	MQGTVLAETEAFIAKQREALLNQRQEILNQQLALQAQLDELDGMLARFDVFEGKPGQQPQNRGRRSTRRGSRREELLRIIKQSQGLARGEILEKMGLKGNKSGEMSVSNALTALTKSKQIARRDRKYVAN*
Ga0134109_100115703	3300010320	Grasslands Soil	MQGTVLADTEAFITKQREALLNERQEMVNQQRVLQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS*
Ga0134109_104488722	3300010320	Grasslands Soil	RQELLNQQQAIQAQLDELDEMLTKFDVFEGKQARKGRDRRTSGARRGSRRDELLKLITGSKGLSRGEILEKMGLKGNKSGEMSVSNALTALTKSKQVARKDRKYVAA*
Ga0134067_1000047210	3300010321	Grasslands Soil	VQAVQKNYNAVQTAEGEMQGTVLAETKAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS*
Ga0134067_103674911	3300010321	Grasslands Soil	MQGTVLADTEAFITKQREALLNERQEMVNQQRVLQAQLDELDGMLAKFDVFEGKAAPQAPTRRKRSSPRGSRREELLRIINQSHGLSRGEILDKMGLKGNKTGEMSVSNALTA
Ga0134065_101784111	3300010326	Grasslands Soil	VQAVQKNYNAVQTAEGEMQGTVLAETEAFIAKQREALLNERQEMVNQQRVLQAQLDELDGMLAKFDVFEGKAAPQAPTRRKRSSPRGSRREELLRIINQSHGLSRGEILDKMGLKGNKTGEMSVSNALTALTKSKQVIRRDRKYIAS*
Ga0134080_103624162	3300010333	Grasslands Soil	VQTAEGEMQGTVLADTEAFITKQREALLNERQEMVNQQRVLQAQLDELDGMLAKFDVFEGKDAPQAPTRRKRSSPRGSRREELLRIINQSHGLSRGQILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS*
Ga0134062_100027342	3300010337	Grasslands Soil	VQAVQKNYNAVQTAEGEMQGTVLAETEAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALAKSKQVTRRDRKYVAS*
Ga0126372_115819992	3300010360	Tropical Forest Soil	MQGTVLAETEAFIAKQREALLAERQEILNQQLALQAQLDELDGMLARFDVFAGKPGQESQDRGRRSSRRGSRREELLRIIKQSQGLARGEILEKMGLKGNKSGEMSVSN
Ga0126378_130195911	3300010361	Tropical Forest Soil	EMQGTVLAETEAFIAKQREALLAERQEILNQQLALQAQLDELDGMIARFDVFEGKPGQQAQNRGRRSGRRGSRREELLRIIKQSQGLARGEILEKMGLKGNKSGEMSVSNALTALTKSKQIARRDRKYVAN*
Ga0134125_118659031	3300010371	Terrestrial Soil	NYNIVQAAEGEMQGTVLAETEAFIAKQREALLNERQEMVNQQRALQAQLDELDGMLAKFDVFEGKAAQPTPTRRKRSGHRGSRREELLRIINQSHGLSRGEILDKVGLKGNKTGEMSVSNALTALTKSKQVIRRDRKYIAS*
Ga0126381_1026287191	3300010376	Tropical Forest Soil	MQGTVLAETEAFIAKQREALLAERQEILNQQLALQAQLDELDGMIARFDVFEGKPGKQAQNRGRRSGRRGSRREELLRIIKQSQGLARGEILEKMGLKGNKSGEMSVSNALTALTKSKQIARRDRKYVAN*
Ga0126381_1034487481	3300010376	Tropical Forest Soil	MQGTVLAETEAFIAKQRGALLNQRQEILNQQLALQAQLDELDGMLARFDVFEGKPGQQPQNRGRRSARRGSRREELLRIIKQSHGLTRGEILEKMGLKGNKSGEMSVSNALTALTK
Ga0134126_101954572	3300010396	Terrestrial Soil	MQGTVLAETEAFIAKQREALLNERQEMVNQQRALQAQLDELDGMLAKFDVFEGKAAQPTPTRRKRSGHRGSRREELLRIINQSHGLSRGEILDKVGLKGNKTGEMSVSNALTALTKSKQVIRRDRKYIAS*
Ga0134124_122251692	3300010397	Terrestrial Soil	QGTVLAETEAFIAKQREALLNERQEMVNQQRALQAQLDELDGMLAKFDVFEGKAAQPTPTRRKRSGHRGSRREELLSIINQSHGLSRGEILDKMGLKGNKTGEMSVSNALTALTKSKQVIRRDRKYIAS*
Ga0126383_123771401	3300010398	Tropical Forest Soil	MQGTVLAETEAFIAKQRGALLNQRQEILNQQLALQAQLDELDGMLARFDVFEGKPGQQPQNRGRRSGRRGSRREELLRIIKQSQGLARGEILEKMGLKGNKSGEMSVSNALTALTKSKQLTRRDRKYAAS*
Ga0137383_101105792	3300012199	Vadose Zone Soil	MQGTVLADTEAFITKQREALLNERQEMVNQQRVLQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKTGEMSVSNALTALTKSKQVTRRDRKYVAS*
Ga0137365_103278472	3300012201	Vadose Zone Soil	MQGTVLADTEAFITKQREALLNERQEMVNQQRVLQAQLDELDGMLAKFDVFEGKAAPQAPTRRKRSGHRGSRREELLRIINQSHGLSRGEILDKMGLKGNKTGEMSVSNALTALTKSKQVIRRDRKYIAS*
Ga0137378_111171931	3300012210	Vadose Zone Soil	MQGTVLAETEAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAPQVPTRRKRSGHRGSRREELLRIINQSHGLSRGEILDKMGLKGNKTGEMSVSNALTALTKSKQVTRRDRKYVAS*
Ga0150985_1018078961	3300012212	Avena Fatua Rhizosphere	GKRSSNQRQELLNQQRAVQDQLDQLDEMLNKFNVFEGKQARGRKQTRSSKGGSGSGRRGSKRDELLRGIRDGHGLTRGEILEKMGLKGNKSGEMSVSNALTALTKNNHVRRDGRKYLAA*
Ga0150985_1225591343	3300012212	Avena Fatua Rhizosphere	CSSDLPYKKNYNAVQTAEGEMQGTVLAETEAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS*
Ga0150984_1005062382	3300012469	Avena Fatua Rhizosphere	VLFRSIRCKPYKKNYNAVQTAEGEMQGTVLAETEAFIAKQREALLNERQEMVDRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS*
Ga0150984_1053829421	3300012469	Avena Fatua Rhizosphere	TKQRESLLTQRQELLNQQQAIQVQLDELDEMLTKFDVFEGKQARKGRDRRTSGARRGSRRDELLKLITGSKGLSRGEILEKMGLKGNKAGEMSVSNTLTALTKSKQVARRDRKYVAG*
Ga0150984_1136547411	3300012469	Avena Fatua Rhizosphere	ETEAFIARQREALINQREELLNQQRVVQDQLDQLDVMLTKFDVFDGKQARGRKQSRSAKGGGGSGRRGSKRDELLRVIRDGHGLTRGEILEKMGLKGNKSGEMSVSNALTALTKNNHVRRDGRKYLAA*
Ga0150984_1163455001	3300012469	Avena Fatua Rhizosphere	MNTTILAETEEFIARQREALLNQREELLNQQRAAQEQLDNVDEMLGKFDVFEGKQTSRRQTRSTGVRKSTGQARRGSKRDELMQVIRDGGGLTRGQILEKMGLKGNKSGEMSISNALTALTKNNQVRRDGRAYHAA*
Ga0137398_109332221	3300012683	Vadose Zone Soil	MQGTVLAETEAFIAKQRESLLAQRQEIVNQQSALQAQLDELDVMLSKFDVFEGKGARKTATRRATGGRRSSRRDELIKLITGSKGLTRGEILGKMGLKGNKAGEMSVSNALTARTKSKQVSRRDRKYMAA*
Ga0137413_101343813	3300012924	Vadose Zone Soil	VQAVQKNYNAVQTAEGEMQGTVLAETEAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSK
Ga0137419_119844671	3300012925	Vadose Zone Soil	NARREPRGRAVYLYQTALAFRRLNMRETVLAETEAFIAKQREALLSQRQEILNQQRALQDQLDEVDVMLAKFDVFEGKTAWQAQPQRRAAGRRSSRREELLRIIKQSNGLGRGEILETMGLKGNKSGEMSVSNALTALTKSKHVIRRDRKYVAS*
Ga0134087_104090131	3300012977	Grasslands Soil	VQAVQKNYNAVQTAEGEMQGTVLAETEAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSN
Ga0164309_104159712	3300012984	Soil	VQAVRKNYNIVQTAEGEMQGTVLAETEAFIAKQREALLNERQEMVNQQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKS
Ga0157373_109461191	3300013100	Corn Rhizosphere	ERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQPTPTRRKRSGHRGSRREELLSIINQSHGLSRGEILDKMGLKGNKTGEMSVSNALTALTKSKQVIRRDRKYIAS*
Ga0182007_100116272	3300015262	Rhizosphere	MQGTVLAETEAFIAKQREALLNERQEMVNQQRALQAQFDELDGMLAKFDVFEGKAAQPTPTRRKRSGHRGSRREELLSIINQSHGLSRGEILDKMGLKGNKTGEMSVSNALTALTKSKQVIRRDRKYIAS*
Ga0134072_102015791	3300015357	Grasslands Soil	MKGEGVKLQFLYRLRRANMQGTVVAETEAFIAKQREALLSQRQEILRQQRALQAQLDELDLMLAKFDVFEGKQARQAPPRRRSSGRRGSRREELLRIIKQSHGLTRGEILEKMGLKGNKSGEMSVSNALTALTKKKQVSRRDRKYLAS*
Ga0132258_132734961	3300015371	Arabidopsis Rhizosphere	MQGTVLAETEAFIAKQREALLNERQEMVNQQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKS
Ga0132256_1011802871	3300015372	Arabidopsis Rhizosphere	MQGTVLAETEAFIAKQREALLNERQEMVNQQRALQAQLDELDGMLAEFDVFEGKAAQQAPTRRNRSGQRGSRREELLSIINQSHGLSRGEILDKMGLKGNKTGEMSVSNALTALTKSKQVIRRDRKYIAS*
Ga0066655_101028462	3300018431	Grasslands Soil	MQGTVLAETEAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS
Ga0066655_111324301	3300018431	Grasslands Soil	ELLNQQQALQQQLDELDEMLHKFDVFVGKAARPRQQTRGRRVSEARRGSRRDELLQVIKAGNGLSRGEILEKMGLKGNKSGEMSVSNALTALTKSKQVVRRDRKYLAG
Ga0066667_100031313	3300018433	Grasslands Soil	VQAVQKNYNAVQTAEGEMQGTVLAETEAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS
Ga0066667_121096361	3300018433	Grasslands Soil	AEGEMQGTVLAETEAFITKQREVLLNERQEMINQQRALQAQLDQLDGMLAKFDVFEGKAAQQAPTRRKRSGHRGSRREELLRIINQSDGLSRGEILGKMGLKGNKSGEMSISNALTALTKSKQVTRRDRKYVAS
Ga0066662_101132863	3300018468	Grasslands Soil	MQGTVLAETEAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYIAS
Ga0066662_104361361	3300018468	Grasslands Soil	MQGTVLAETEAFITKQRESLLTQRQELLNQQQAIQAQLDELDEMLTKFDVFEGKQARKGGSRRTGGGRRSSRREELLKLISGSKGLSRGEILENMGLKGNKAGELSVAKSLTALTKSKQVARRDRKYVAG
Ga0066662_104422232	3300018468	Grasslands Soil	MQATVLAETEAFITRQREALLQQRQELVNQEQLIGQQLDEMDEMLRKFDVFEGKAARPRQQARGPRRGASGTRRGSKRDELLTVIRQGNGLTRGEILERMGLKGNKAGEMSVSNALTALAKANQVSRRDRKYVAA
Ga0066662_111612782	3300018468	Grasslands Soil	LNQREELLNQQRAIQEQLNQLDDMLAKFDVFEGKGQQRKQSRSTGTRRSSGRRGNKRDDLLRVIREGGGLTRGEILEKMGLKGNKSGEMSISNALTALTKNNQVRRDGRAYHAA
Ga0066662_112033421	3300018468	Grasslands Soil	MQGTVLADTEAFITKQREALLNERQEMVNQQRVLQAQLDELDGMLAKFDVFEGKAAPQAPTRRKRSSPRGSRREELLRIINQSHGLSRGEILDKMGLKGNKTGEMSVSNALTALTKSKQ
Ga0066669_101355832	3300018482	Grasslands Soil	MQGTVVAETEAFIAKQREALLSQRQEILRQQRALQAQLDELDLMLAKFDVFEGKQARQAPPRRRSSGRRGSRREELLRIIKQSHGLTRGEILEKMGLKGNKSGEMSVSNALTALTKKKQVSRRDRKYLAS
Ga0066669_104321663	3300018482	Grasslands Soil	MQTSVLAATEAFIAKQRESLLAQRQELVAQQQAVQAQIDELDVMLTKFDVFEGKQARKGSGRRTSGGRSGSRREELLRLITGSKGLSRGEILEKMGLKGNKAGEMSVSNALTALTKSKQVSRKDRKYVSA
Ga0066669_106342861	3300018482	Grasslands Soil	MQTSVLAETEAFIAKQRESLLTQRQELLAQQQTIQAQIDELDVMLTKFDVFEGKQGPKGGTRRPGGGRRGSRREELLKLIAGSKGLSRGEILEKIGLKGNKAGEMSVSNALTSLIKSNQSARRDRKYVAA
Ga0207693_108133501	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MQGTVLAETEAFIAKQREALLNERQEMVNQQRALQAQLDELDGMLAKFDVFEGKAAQPTPTRRKRSGHRGSRREELLRIINQSHGLSRGEILDKMGLKGDKSGEMSVSIQGPNGQNES
Ga0207663_106473671	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MQGTVLAETEAFIAKQREALLNERQEMVNQQRALQAQLDELDGMLAKFDVFEGKAAQPTPTRRKRSGHRGSRREELLSIINQSHGLSRAEILDKMGLKGNKTGEMSVSNALTALTKSKQVIRRDRKYIAS
Ga0207700_104352971	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	APSAAQVLLYSVKRLAERARDKLWSIHMESTIVAETEAFIARQREALLNQRQELLNQQRALQEQLDHLDEMLTKFDVFEGKYANRGRASTRRASRSRRASRREALLQVIREGNGLTRGEILERLGLKGNKTGEMSVSNALTALTRSNQLRRDGRRYLSA
Ga0207644_117139931	3300025931	Switchgrass Rhizosphere	MQGTVLAETEAFIAKQREALLNERQEMVNQQRALQAQLDELDGMLAKFDVFEGKAAQPTPTRRKRSGHRGSRREELLSIINQSHGLSRGEILDKMGLKGNKTGEMSVSNALTALTKS
Ga0209055_10306672	3300026309	Soil	MQGTVLAETEAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSDGLSRGEILGKMGLKGNKSGEMSISNALTALTKSKQVTRRDRKYVAS
Ga0209155_10067982	3300026316	Soil	MQGTVLAETEAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQPPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS
Ga0209059_12561122	3300026527	Soil	GEMQGTVLADTEAFITKQREALLNERQEMVNQQRVLQAQLDELDGMLAKFDVFEGKAAPQAPTRRKRSSPRGSRREELLRIINQSHGLSRGEILDKMGLKGNKTGEMSVSNALTALTKSKQVIRRDRKYIAS
Ga0209807_10439592	3300026530	Soil	MQGTVLADTEAFITKQREALLNERQEMVNQQRVLQAQLDELDGMLAKFDVFEGKAAPQAPTRRKRSSPRGSRREELLRIINQSHGLSRGEILDKMGLKGNKTGEMSVSNALTALTKSKQVIRRDRKYIAS
Ga0209474_105946601	3300026550	Soil	LNQRQEILNKQKELDAELEKVDQMLTKFDVFEGKAASRRSTGTTRRSSGRRGSRREGILSIIREAGGLTRGEILEKMGLKGNKSGEMSVSNALTALTKGNQVRRDQNRKYVAA
Ga0179593_11727142	3300026555	Vadose Zone Soil	MQGTVLAETEAFIAKQRESLLAQRQEIANQQSALQTQLDELDEMLTKFDVFEGKQARRGGRRRTGGGRRGSRREELLKLIGGSKGLSRGEILEKMGMKGNKAGEMSISNALTALTKSKQVARKDRKYHAA
Ga0209073_100028176	3300027765	Agricultural Soil	MQGTVLAETEAFIAKQREALLNERQEMVNQQRALQAQLDELDGMLAKFDVFEGKAAQPTPTRRKRSGHRGSRREELLSIINQSHGLSRGEILDKMGLKGNKTGEMSVSNALTALTKSKQVIRRD
Ga0209488_101471782	3300027903	Vadose Zone Soil	MQATVLAETEAFITKQREALLAQRQELLNQQNAVQKQLDEVDEMLAKFDVFAGKRRQPGTRRASGGRRSSRREELLKVIKAGHGLTRGEILDKMGLKGNKAGEMSVSNALTALTKSKQVARKDRKYMAA
Ga0209488_103521372	3300027903	Vadose Zone Soil	MDSTVLAETEAFIARQREALINQREELLNQQRVLQDQLDQLDVMLTKFDVFEGKQARGRKQTRSSKGGGGSGRRGSKRDELLRVIRDGHGLTRGEILEKMGLKGNKSGEMSVSNALTALTKNNHVRRDSFAEK
Ga0308178_10281031	3300030990	Soil	AVQKNYNAVQTAEGEMQGTVLAETEAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLTKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS
Ga0073994_100191753	3300030991	Soil	VQGTVLAETEAFIAKQREALLSQRQEIVNQQRALQSQLDELDEMLAKFDVFGGKAARPTRTRRTSSRRRGSRREELLKIIKQGHGLTRGELLDKMGLKGNKPGEMSVSNALTALTKSKQVARKDRKYVAS
Ga0308189_101276541	3300031058	Soil	KKNYNAVQTAEGEMQGTVLAETEAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS
Ga0308184_10338712	3300031095	Soil	MQGTVLAETEAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSDEMSVSNALTALTKSKQVTRRDRKYVAS
Ga0308193_10967671	3300031096	Soil	AKQREALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS
Ga0308181_10952731	3300031099	Soil	AEGEMQGTVLAETEAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLTKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS
Ga0308187_102445571	3300031114	Soil	IFVQTAEGEMQGTVLADTEAFITKQREALLNERQEMVNQQRVLQAQLDELDGMLTKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS
Ga0307501_101787601	3300031152	Soil	MQGTVLAETEAFIAKQRDALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS
Ga0308194_100690392	3300031421	Soil	QAVQKNYNAVQTAEGEMQGTVLAETEAFIAKQREALLNERQEMVNRQRALQAQLDELDGMLAKFDVFEGKAAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQVTRRDRKYVAS
Ga0307475_101259683	3300031754	Hardwood Forest Soil	MQGTFLAETEAFIAKQREALLNERQEIVNRQRALQAQLDELDGMLAKFDVFEGKDAQQAPTRRNRSGQRGSRREELLRIINQSHGLSRGEILDKMGLKGNKSGEMSVSNALTALTKSKQLTRRDRKYVAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084528

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences