Metagenome / Metatranscriptome Family F084488

Basic Information
Family ID	F084488
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	115 residues
Representative Sequence	MNLIDLDDKVTAAAVAAAGTVIGTLIQLHVTWRKEVSERKRGVPATKKSRRGPVLAVSLLLIGAAVGGFAFSQYLVRQSDLESAALRGQLQTQLAQISATAARLERAALSDHGSSGRPA
Number of Associated Samples	99
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.92 %
% of genes near scaffold ends (potentially truncated)	91.96 %
% of genes from short scaffolds (< 2000 bps)	83.04 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Most Common Taxonomy
Group	Bacteria (78.571 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.321 % of family members)
Environment Ontology (ENVO)	Unclassified (26.786 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.893 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 72.11% β-sheet: 0.00% Coil/Unstructured: 27.89%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00144	Beta-lactamase	4.46
PF10458	Val_tRNA-synt_C	4.46
PF03009	GDPD	2.68
PF07311	Dodecin	1.79
PF13360	PQQ_2	1.79
PF00069	Pkinase	1.79
PF01850	PIN	1.79
PF01553	Acyltransferase	0.89
PF13602	ADH_zinc_N_2	0.89
PF01527	HTH_Tnp_1	0.89
PF00990	GGDEF	0.89
PF08668	HDOD	0.89
PF04972	BON	0.89
PF07045	DUF1330	0.89
PF00135	COesterase	0.89
PF05193	Peptidase_M16_C	0.89
PF14850	Pro_dh-DNA_bdg	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	7.14
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	4.46
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	4.46
COG2367	Beta-lactamase class A	Defense mechanisms [V]	4.46
COG0584	Glycerophosphoryl diester phosphodiesterase	Lipid transport and metabolism [I]	2.68
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	1.79
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.89
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.89

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.57 %
Unclassified	root	N/A	21.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.57 %
Unclassified	root	N/A	21.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.57 %
Unclassified	root	N/A	21.43 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	67.86 %
Unclassified	root	N/A	21.43 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	61.61 %
Unclassified	root	N/A	21.43 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.43 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.79 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.89 %
Rhodocyclales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.43 %
unclassified Burkholderiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales	1.79 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.79 %
Rhodocyclaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae	0.89 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.43 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	1.79 %
unclassified Bradyrhizobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae	1.79 %
Rugosibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Rugosibacter	0.89 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.43 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1.79 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	1.79 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	0.89 %
Rugosibacter aromaticivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Rugosibacter → Rugosibacter aromaticivorans	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.43 %
Bradyrhizobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	1.79 %
Burkholderiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	1.79 %
Pseudomonas sp. GM25	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GM25	0.89 %
Rugosibacter aromaticivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Rugosibacter → Rugosibacter aromaticivorans	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001137\|JGI12637J13337_1020084	Not Available	590	Open in IMG/M
3300002245\|JGIcombinedJ26739_100525469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1060	Open in IMG/M
3300002917\|JGI25616J43925_10200505	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300002917\|JGI25616J43925_10380347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GM25	521	Open in IMG/M
3300003368\|JGI26340J50214_10019425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2097	Open in IMG/M
3300004082\|Ga0062384_100357980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	926	Open in IMG/M
3300004091\|Ga0062387_100413329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	913	Open in IMG/M
3300004479\|Ga0062595_101904582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	570	Open in IMG/M
3300005293\|Ga0065715_11063276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	529	Open in IMG/M
3300005439\|Ga0070711_101561273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	577	Open in IMG/M
3300005526\|Ga0073909_10112842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1090	Open in IMG/M
3300005617\|Ga0068859_100610107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1184	Open in IMG/M
3300006102\|Ga0075015_100090980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	1518	Open in IMG/M
3300006176\|Ga0070765_100933294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	820	Open in IMG/M
3300006575\|Ga0074053_10733134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	660	Open in IMG/M
3300006604\|Ga0074060_11040584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	727	Open in IMG/M
3300007255\|Ga0099791_10156087	Not Available	1067	Open in IMG/M
3300007265\|Ga0099794_10797077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	505	Open in IMG/M
3300007788\|Ga0099795_10584087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	530	Open in IMG/M
3300009624\|Ga0116105_1052995	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300010341\|Ga0074045_10395071	Not Available	897	Open in IMG/M
3300010343\|Ga0074044_10269336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1123	Open in IMG/M
3300010373\|Ga0134128_10370649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1600	Open in IMG/M
3300011269\|Ga0137392_10291709	Not Available	1347	Open in IMG/M
3300011269\|Ga0137392_10784108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	787	Open in IMG/M
3300012202\|Ga0137363_10988405	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	715	Open in IMG/M
3300012203\|Ga0137399_11607648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	538	Open in IMG/M
3300012361\|Ga0137360_11769680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	524	Open in IMG/M
3300012683\|Ga0137398_10515120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	823	Open in IMG/M
3300012922\|Ga0137394_10111406	All Organisms → cellular organisms → Bacteria	2311	Open in IMG/M
3300012923\|Ga0137359_11323069	Not Available	609	Open in IMG/M
3300012924\|Ga0137413_11044598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	643	Open in IMG/M
3300012929\|Ga0137404_10508792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1075	Open in IMG/M
3300013307\|Ga0157372_11058735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	939	Open in IMG/M
3300013308\|Ga0157375_10183305	All Organisms → cellular organisms → Bacteria	2246	Open in IMG/M
3300014168\|Ga0181534_10790123	Not Available	560	Open in IMG/M
3300015264\|Ga0137403_10418054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1219	Open in IMG/M
3300017938\|Ga0187854_10381918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	592	Open in IMG/M
3300017940\|Ga0187853_10107550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1367	Open in IMG/M
3300017955\|Ga0187817_10720162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	636	Open in IMG/M
3300017995\|Ga0187816_10321262	Not Available	681	Open in IMG/M
3300018006\|Ga0187804_10038415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Rhodocyclaceae → Rugosibacter → Rugosibacter aromaticivorans	1833	Open in IMG/M
3300018013\|Ga0187873_1021851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3257	Open in IMG/M
3300018021\|Ga0187882_1427612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	502	Open in IMG/M
3300018034\|Ga0187863_10300107	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300018035\|Ga0187875_10576261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	594	Open in IMG/M
3300018085\|Ga0187772_11154664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	569	Open in IMG/M
3300018086\|Ga0187769_10072134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2437	Open in IMG/M
3300020021\|Ga0193726_1013785	All Organisms → cellular organisms → Bacteria	4257	Open in IMG/M
3300020140\|Ga0179590_1155829	Not Available	625	Open in IMG/M
3300020170\|Ga0179594_10201141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	746	Open in IMG/M
3300020199\|Ga0179592_10520269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	508	Open in IMG/M
3300020581\|Ga0210399_10847674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	744	Open in IMG/M
3300020581\|Ga0210399_11566602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	509	Open in IMG/M
3300020582\|Ga0210395_10742104	Not Available	733	Open in IMG/M
3300020583\|Ga0210401_10105106	All Organisms → cellular organisms → Bacteria	2652	Open in IMG/M
3300021086\|Ga0179596_10704819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	511	Open in IMG/M
3300021170\|Ga0210400_10961773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	695	Open in IMG/M
3300021170\|Ga0210400_11416658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	553	Open in IMG/M
3300021170\|Ga0210400_11463298	Not Available	543	Open in IMG/M
3300021178\|Ga0210408_10078061	All Organisms → cellular organisms → Bacteria → Proteobacteria	2594	Open in IMG/M
3300021401\|Ga0210393_10040917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3638	Open in IMG/M
3300021403\|Ga0210397_10110389	All Organisms → cellular organisms → Bacteria → Proteobacteria	1872	Open in IMG/M
3300021405\|Ga0210387_11076250	Not Available	702	Open in IMG/M
3300021406\|Ga0210386_10377276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1221	Open in IMG/M
3300021406\|Ga0210386_11323042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	606	Open in IMG/M
3300021406\|Ga0210386_11599851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	541	Open in IMG/M
3300021407\|Ga0210383_10615724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	935	Open in IMG/M
3300021411\|Ga0193709_1121086	Not Available	535	Open in IMG/M
3300021420\|Ga0210394_10920454	Not Available	760	Open in IMG/M
3300021420\|Ga0210394_11418161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	590	Open in IMG/M
3300021433\|Ga0210391_10733355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	774	Open in IMG/M
3300021474\|Ga0210390_10613020	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300021477\|Ga0210398_10573678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	917	Open in IMG/M
3300021477\|Ga0210398_10764542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	779	Open in IMG/M
3300021479\|Ga0210410_10308890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1419	Open in IMG/M
3300021479\|Ga0210410_11202449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	650	Open in IMG/M
3300022726\|Ga0242654_10260965	Not Available	624	Open in IMG/M
3300024288\|Ga0179589_10364260	Not Available	658	Open in IMG/M
3300025414\|Ga0208935_1019255	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300025604\|Ga0207930_1027581	All Organisms → cellular organisms → Bacteria → Proteobacteria	1546	Open in IMG/M
3300025911\|Ga0207654_10817154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	674	Open in IMG/M
3300025924\|Ga0207694_10759138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	819	Open in IMG/M
3300025935\|Ga0207709_10647458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	841	Open in IMG/M
3300025938\|Ga0207704_11395217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	600	Open in IMG/M
3300025941\|Ga0207711_10157867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2051	Open in IMG/M
3300027439\|Ga0209332_1067675	Not Available	649	Open in IMG/M
3300027619\|Ga0209330_1066867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	820	Open in IMG/M
3300027652\|Ga0209007_1186758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	509	Open in IMG/M
3300027698\|Ga0209446_1075253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	861	Open in IMG/M
3300027867\|Ga0209167_10591205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	608	Open in IMG/M
3300027908\|Ga0209006_10406484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1146	Open in IMG/M
3300028047\|Ga0209526_10233568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1263	Open in IMG/M
3300030706\|Ga0310039_10099238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium	1219	Open in IMG/M
3300031231\|Ga0170824_100720464	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300031231\|Ga0170824_113959639	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300031616\|Ga0307508_10893466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	514	Open in IMG/M
3300031708\|Ga0310686_117480941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	546	Open in IMG/M
3300031718\|Ga0307474_10153969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1736	Open in IMG/M
3300031718\|Ga0307474_10461123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	994	Open in IMG/M
3300031753\|Ga0307477_10071447	All Organisms → cellular organisms → Bacteria	2399	Open in IMG/M
3300031823\|Ga0307478_10525835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium	987	Open in IMG/M
3300032180\|Ga0307471_102813843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	618	Open in IMG/M
3300032782\|Ga0335082_11193136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	628	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.07%
Host-Associated	Host-Associated	8.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.00%
Aquatic	Environmental → Aquatic	16.07%
Plants	Host-Associated → Plants	8.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.00%
Freshwater	Environmental → Aquatic → Freshwater	15.18%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.68%
Sediment	Environmental → Aquatic → Sediment	0.89%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.18%
Loam	Environmental → Terrestrial → Soil → Loam	8.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.36%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	28.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.79%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.04%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.36%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.32%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.14%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.36%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.46%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.46%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.68%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.79%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001137	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027439	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12637J13337_10200841	3300001137	Forest Soil	MNLLDLDDKVTAAAIAAAGTVIGTLIQLKFAWRKEVSERARGVPASKKSRRGPVLAVGLLLVGAVVGGFAFSQYLVRQQSDVESAARHSELQTQLA
JGI12635J15846_106002041	3300001593	Forest Soil	MNLLDLDDKVTAAAIAAAGTVIGTLIQLKFAWRKEVSERARGVPASKKSRRGPVLAVGLLLVGAVVGGFAFSQYLVRQSDVESAAR
JGIcombinedJ26739_1005254691	3300002245	Forest Soil	MNLFDLDDKVTAAAIAAAGTVIGTLIQLKFAWRKEVSERARGVPASKKSRRGPVLAVCLLLVGAVVGGFAFSQYLVRQSDVESAARHSELQTQLAQISATAARL
JGI25616J43925_102005051	3300002917	Grasslands Soil	MNPFDFDLKVSATAVAALGTVIGALAQLRMAWRKELSERARGVPATKKSRRGPVLAVFLLLGAAMVAGFALSQYLMVRQSDRESAALRGDLQAQVARISA
JGI25616J43925_103803471	3300002917	Grasslands Soil	MLPLSRPLNLGPGWTAAGNGRWDDLSEVLMNLFDLDDKVTAAAVAAAGTVIGSLIQLRVSWRKEVSERARGVPATKKSRRGPVMAVGLLLVGAAAGGFAFSQYLVKQSDLETAALRDQLQTQLAQISATAERLERVALSDHGSSARTAEDRDAEGVAATTT
JGI26340J50214_100194253	3300003368	Bog Forest Soil	MNLFDLDDKVAAAAVAAAGTVIGTLIQLHFTWRKEVSERARGVPASKKSRRGPVLAVVLLLIGAAVGGFAFSQYLVRQSDLESAAMRGQLQMQLAQIGATAARL
Ga0062384_1003579802	3300004082	Bog Forest Soil	MNLFDLDDKVTAAAVAAAGTVIGALIQMRVVWRKEVSERTRGVPATKKSRRGPVLAVVLLLIGAVVGGFAFSQYLVRQSDLESAALRGQLQTQLAQISATAARLERATLSDHGSSGHAADDRRGPDDVTVTTSVEP
Ga0062387_1004133292	3300004091	Bog Forest Soil	MTAIETSPALPDVFMNMFDLNDSVVAAVVAAGGTVIGSLIQLRVVWRKETSERSRGVPVSKKSRRGPVMAVCLLLIGAAVGGFALSQYFMQRSDLESAAQRGQLQAQLAQISATAERLERAALSDHGASGRALEN
Ga0062386_1000254571	3300004152	Bog Forest Soil	MLDLDDRVIAAAVAAAGTVIGTLIQLHVTWRREVSERARGVPASKKSRRGPVLAVGLLLIGAAVGGFAFSQYLVRQSDLESAAMR
Ga0062595_1019045821	3300004479	Soil	MNLGLDDNVVAAAVAAAGTVIGALIQLRITWRKEVSERARGVPMTKKSRRGPVLAVGLLLSAAAVGGFAFSQYLMKQSDRESAALRDGELQAQLTQIRATAER
Ga0065715_110632761	3300005293	Miscanthus Rhizosphere	MNLGLDDNVVAAAVAAAGTVIGALIQLRITWRKEVSERARGVPMTKKSRRGPVLAVGLLLSAAAVGGFAFSQYLMKQSDREAAALRDGELQAQLTQIRATAE
Ga0070711_1015612731	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNLGLDDNVVAAAVAAAGTVIGALIQLRITWRKEVSERARGVPMTKKSRRGPVLAVGLLLSAAAVGGFAFSQYLMKQSDREAAALRDGEL
Ga0073909_101128422	3300005526	Surface Soil	MNLGLDDNVVAAAVAAAGTVIGALIQLRITWRKEVSERARGVPMTKKSRRGPVLAVGLLLSAAAVGGFAFSQYLMKQSDRESAALRDGELQAQLTQIRATAERLERVTLNDHSSSARTA
Ga0068859_1006101072	3300005617	Switchgrass Rhizosphere	MNLGLDDNVVAAAVAAAGTVIGALIQLRITWRKEVSERARGVPMTKKSRRGPVLAVGLLLSAAAVGGFAFSQYLMKQSDREAAALRDGELQAQLTQIRATAERLERVTLNDHSSSARTADGEGVSVTTTVEPCHARAGI
Ga0075015_1000909802	3300006102	Watersheds	MTLPFNLDSNLVAAALTAVGTVIGALIQLRIAWRREVSDRARGVPVTRKSRRGPVLAVFLLLVAAGLGGFALSEYLVGQSARESAKMRGELHAQVAQI
Ga0070765_1009332941	3300006176	Soil	VTAAAVAAAGTVIGSLIQLRVLWRKETSERSRGIPSTKKSRRGPVLAICLLLIGAAVGGFAVSQYLVRQSDLESAALRGQLQSQLAQINATAERLERATLSEHASSARAADDRRGAE
Ga0074053_107331342	3300006575	Soil	MNLGLDDNVVAAAVAAAGTVIGALIQLRITWRKEVSERARGVPMTKKSRRGPVLAVGLLLSAAAVGGFAFSQYLMKQSDRESAALRDGELQAQLTQIRATAERLERVTLNDHSSSARTADGEGVSVTTTVETCRARAGIV
Ga0074060_110405841	3300006604	Soil	MNLGLDDNVVAAAVAATGTVIGALIQLRVTWRKEVSERARGVPMTKKSRRGPVLAVGLLLSAAAVGGFAFSQYLMKQSDRESAALRDGELQAQLTQIRATAERLERVTLNDHSSSARTADGEGVSVTTTVEPCHARAGIVTD
Ga0099791_101560872	3300007255	Vadose Zone Soil	MNLFDLDDKVTAAAVAAAGTVIATLIQLHVTRRKEVSERARGVPATKKSRRGPVMAVTLLLIGAALGGFAFSQYLVRQSDLESAALRGQLQTQLAQISATAARLERAALSDHGSNGHTADDRRGAEGVAATTTVGPCR
Ga0099794_107970771	3300007265	Vadose Zone Soil	MALFEFDPKVSATAVAALGTVIGALAQLRMAWRKELSERARGVPATKKSRRGPVLAVFLLLVAATVGGFVLSQFLMVRQSDRETAALRGDLQ
Ga0099795_105840871	3300007788	Vadose Zone Soil	MNLFNLDEKVTAAAVAAAGTVIGSLIQLRVSWRKEVSERARGVPATKKSRRGPVLAVGLLLIGAAAGGFAFSQYLVKQSDLETAALRGQLQTQLAQISATAARLERVALSDHGSSARTAEDRDAEGV
Ga0116105_10529952	3300009624	Peatland	MLDLDDRVIAAAIAAAGTVVGTLIQLHITWRREVSERARGVPASKKSRRGPVLAISLLLIGAAVGGFAFSQFLVRQSDLESAAIHSQLQMQLARMNATAARLERVAL
Ga0074045_103950711	3300010341	Bog Forest Soil	MIDLDDRVIAAAIAAAGTVIGTLIQLHITWRKEVRDRARGVPASRKSRRGPVLAVGLLLTGGAVGGFAFSQYLVRQSDVESAAVRGQLQTHLAQMNATATRLERAALRDQELG
Ga0074045_105213242	3300010341	Bog Forest Soil	MNIFDLDGQVAAAAVAAAGTVIGSLIQLRVVWRKETSERSRGVPATKKSRRGPILAVCLLLIGAAVGGFAFSQYLMARQSDLESTAQR
Ga0074044_102693361	3300010343	Bog Forest Soil	MNPFDLDDKVTAAAVAAAGTVIGALIQMRVVWRKEVSERTRGVPATKKSRRGPVLAVGLLLIGAVVGGFAFSQYLVRQSDLESAALRGQLQTQLAQISATAARLERASLSDHGSSGHAADDRREPEDVTVTTT
Ga0134128_103706491	3300010373	Terrestrial Soil	MNLGLDDNVVAAAVAAAGTVIGALIQLRITWRKEVSERARGVPMTKKSRRGPVLAVGLLLSAAGVGGFAFSQYLMKQSDREAAALRDGELQAQLTQIRATAERLERVTLNDHSSSARTA
Ga0126351_11850841	3300010860	Boreal Forest Soil	MSLFNLDDKVTAAAVAAAGTVIGTLIQLHVTWRREASERKRGVQATKKSRRGPLLAIGLLLIGAAVGGFAFSQYLVKQSDLESAALRV
Ga0137392_102917091	3300011269	Vadose Zone Soil	MNLFDLDDKVTAAAVAAAGTVIATLIQLHVTRRKEVSERARGVPATKKSRRGPVIAVTLLLIGAALGGFAFSQYLVRQSDLESAALRGQLQTQLAQISATAARLERAALSDHGSNGHTA
Ga0137392_107841081	3300011269	Vadose Zone Soil	MSLFDLDDKVTAAAVAAAGTVIGTLIQLHVTWRREMSERKRGVPVTKKSRRGPVLAVSLLLIGAAVGGFAFSQYLVRQSDLESAALRVQLQTQIAQISATAARLERAALSDH
Ga0137363_109884051	3300012202	Vadose Zone Soil	MTLSDFDERMAAAAIAATGTIIGALLQLRVAWRKELSERARSVPVSKKARRGPVVAVGLLLVAAGVGGFALSQYLVGLSNRESLAMRGEL
Ga0137399_116076481	3300012203	Vadose Zone Soil	MNLFDLDEKVTAAAVAAAGTVIGSLIQLRVSWRKEVSERARGVPATKKSRRGPVLAVGLLLIGAAAGGFAFSQYLAKQSDLETAALRGQLQTQLAQISATAARLERVALSDHGS
Ga0137360_117696802	3300012361	Vadose Zone Soil	MSFFDLDDKVTAAAVAAAGTVIGTLIQLHVTWRREMSERKRGVPVTKKSRRGPVWAVSLLLIGAAVGGFAFSQYLVRQSDLESAALRVQLQTQIAQISATAARLERAALSD
Ga0137398_105151202	3300012683	Vadose Zone Soil	MNLFDLDDRVTAAAIAATGTIIGALIQLRFAWRREVSERARGAPVTKKSRRGPVLAVFVLLVAAGVGGFAFSQYLVKLSDRDSAAMRAELSTQLAQISATAARLESL
Ga0137394_101114061	3300012922	Vadose Zone Soil	MNLFDLDDRVTAAAIAAAGTIIGTLIQLKFAWRKEVRERARGVPATKKSRRGPVLAVGLLLVGALVGGFVLSQYLVRQSDLDSAARHSQLQTQLAQISATAARLERETLSSHGSSGPVADDHGGAQSITVTTSVGPCRARAVVAT
Ga0137359_113230692	3300012923	Vadose Zone Soil	MNLFDLDDKVTAAAVAAAGTVVATLIQLHVTRRKEVSERARGVPPTKKSRRGPVMAVTLLLIGAAVGGFAFSQYLVRQSDLESAALRGQ
Ga0137413_110445981	3300012924	Vadose Zone Soil	MNPFDLDDRVTAAAVAAAGTILGAVIQLRVAWRKEVSERARGVPMTKKSRRGPVLAVVLLVAAASVGGFASSQYLVNRSERESAAVQGELKTQLAQINATAQRLEQATRPDRGTTGRADDDRRGAEGVTVTTTVGP
Ga0137404_105087921	3300012929	Vadose Zone Soil	MNLFDLDDRVTAAAVAATGTIIGAVIQLRAAWRREVSERARGAPMTKKSRRGPVLAVFLLFFAAGVSGFAFSQYLVKQSDRDSAAAVHGELQQQLAQINATAQRLERAVEDGL
Ga0137407_109133011	3300012930	Vadose Zone Soil	MSLFDLDDKVTAAAVAAAGTVIGTLIQLHVTWRREMSERKRGVPVTKKSRRGPVWAVSLLLIGAAVGGFAFSQYLVRQSDLESAA
Ga0157372_110587351	3300013307	Corn Rhizosphere	MKLGLDDNVVAAAVAAAGTVIGALIQLRITWRKEVSERARGVPMTKKSRRGPVLAVGLLLSAAAVGGFAFSQYLMKQSDRESAALRDG
Ga0157375_101833053	3300013308	Miscanthus Rhizosphere	MNLGLDDNVVAAAVAAAGTVIGALIQLRITWRKEVSERARGVPMTKKSRRGPVLAVGLLLSAAAVGGFAFSQYLMKQSDRESAALRDGELQAQLTQIRATAERLERVTLNDHSSSAR
Ga0181534_107901231	3300014168	Bog	MEGFMIDLDDRVTAAAIAAAGTVIGTLVQLHITWRKEVRDRARGVPASRKSRRGPVFAVGLLLAGAGVGGFAFSQYLMRQSDLDSAVIRGQLQAQLAQMNATAARLERAVQVDHAAASR
Ga0137403_104180542	3300015264	Vadose Zone Soil	MNLFDLDDRVTAAAVAATGTIIGAVIQLRAAWRREVSERARGAPMTKKSRRGPVLAVFLLFFAAGVSGFAFSQYLVKQSDRDSAAAVHGELQQQLAQINATAQRLERATLG
Ga0187854_103819181	3300017938	Peatland	MLNLDDRVTAAAIAAAGTVIGTLIQLHVTWRREVSARARGLPVSKKSRRGPVLAVSLLLIGAAVGGFAFSQYLVRQPDLESAAMRGQLQMQLQQISATAARLERAALSDRGSSGRPAEDRRSAEGVAA
Ga0187853_101075502	3300017940	Peatland	MGCWEDLSEVFMLNLDDRVTAAAIAAAGTVIGTLIQLHVTWRREVSARARGLPVSKKSRRGPVLAVSLLLIGAAVGGFAFSQYLVRQPDLESAAMRGQLQMQLQQISATAARLERAALSDRGSSGRPAEDRRSAE
Ga0187817_107201622	3300017955	Freshwater Sediment	MIIPIDLDDRVTAAAVAAAGTVIGALIQLRAAWRNELSARARGVPVTKKSRRGPVLAVVLLLVAAGVGGFVLSQYLVRQSDRESEALRKEMQAQLAQLGATAQRLERA
Ga0187816_103212621	3300017995	Freshwater Sediment	MNLFDLDDKVTAAAVAAAGTVIGALIQMQVVWRKEVSERARGVPATKKSRRGPVLAVGLLLIGAVVGGFALSQYLVRQSDLESAALRGQLQRQLAQISATAARLERATLSDHGSSGHA
Ga0187804_100384151	3300018006	Freshwater Sediment	MIIPIDLDDRVTAAAVAAAGTVIGALIQLRAAWRNELSARARGVPVTKKSRRGPVLAVVLLLVAAGVGGFVLSQYLVRQSDRESEALRKEMQAQLA
Ga0187873_10218511	3300018013	Peatland	MGCWEDLSEVFMLNLDDRVTAAAIAAAGTVIGTLIQLHVTWRREVSARARGLPVSKKSRRGPVLAVSLLLIGAAVGGFAFSQYLVRQPDLESAAMRGQLQMQLQQISATAARLERAALSDRGSSGRPAEDRRSAEGVAATATLGPCRTRA
Ga0187882_14276122	3300018021	Peatland	MGCWEDLSEVFMLNLDDRVTAAAIAAAGTVIGTLIQLHVTWRREVSARARGLPVSKKSRRGPVLAVSLLLIGAAVGGFAFSQYLVRQPDLESAAMRGQL
Ga0187863_103001071	3300018034	Peatland	MLDLDDRVIAAAIAAAGTVVGTLIQLHITWRREVSERARGVPASKKSRRGPVLAISLLLIGAAVGGFAFSQFLVRQSDLESAAIHSQLQMQLA
Ga0187875_105762611	3300018035	Peatland	MGCWEDLSEVFMLNLDDRVTAAAIAAAGTVIGTLIQLHVTWRREVSARARGLPVSKKSRRGPVLAVSLLLIGAAVGGFAFSQYLVRQPDLESAAMRGQLQMQLQQISATAARLERAALSDRGSSGRPAEDRRSAEGVAATATL
Ga0187772_111546641	3300018085	Tropical Peatland	MNAFDLDDRVTAAAVAAAGTVIGALIQLRVAWRKEVSDRARGAPVTKKSRRGPVLAVFLLLIAAGVGGFALSQYFVQQAGRESAAMRGELQAQLAQISATAQRLERASL
Ga0187769_100721343	3300018086	Tropical Peatland	MNAFDMDDRVTAAAVAAAGTIVGALIQLRVAWRKEVSERARGAPVTKKSRRGPVLAVFLLLIAAGVGGFALSQYFVRQADLESTAMRGELQAQLAQISATAQ
Ga0187770_105143061	3300018090	Tropical Peatland	MNAFDLDDRVTAAAVAAAGTVIGALIQLRIAWRNEVSARARGAPVTKKSRRGPVLAVFLLLIAAGVGGFALSQYWMRQADRESTAL
Ga0193726_10137853	3300020021	Soil	MSLFDLDDKVTAAAVAAAGTVIGTLIQLHVTWRREVSDRKRGVPATKKSRRGPVLAVCLLLIGAVVGGFAFSQYLVKQSDLESAALRLQLRTQLAQISATAERLERAALNDHASSGRAPDDRRSAE
Ga0179590_11558291	3300020140	Vadose Zone Soil	MNLFDLDDRVTAAAIAAAGTIIGTLIQLKFAWRKEVRERARGVPATKKSRRGPVLAVGLLLVGALVGGFVLSQYLVRQSDLDSAARHSQLQTQLAQISATAARLERETLSSHGSSGPVADDHGGAQSITVTTSV
Ga0179594_102011411	3300020170	Vadose Zone Soil	MSPFDLDDRVIAAAVAAAGTIVGALIQLRVAWRKEVSERVRGVPITKKGRRGPVLAVLLLLIAAGVGGFALSQYIVSQSDRASAALLHGELKAQLAQISAAAERLERATPNDRGPS
Ga0179592_105202691	3300020199	Vadose Zone Soil	PMSLFDLDDKVVAAAVAATGTVIGALVQLRVAWRAQVSERSRGVPATKKSRRGPVLALGLLLIAAAVGGFAFSQYFVRQSDRESAALRCELKTQLAQINATAERLERATLADHGSSGRAAEDRGTADRRVAEGVIVTTTVGPCRVHTDVVLDAAPPCAEKEPLQVTLCA
Ga0210399_108476742	3300020581	Soil	MINPFDLDDRVIAAAVAATGSIIGALIQLRVAWRRGVADRARGAPITKKSRRGPVAAVLVLLVAAGVGGFAFSQSLVRQSEHETAELRGELRTQLDQINATAARLELATMGDHAQSR
Ga0210399_115666021	3300020581	Soil	VTAAAVAAAGTVIGSLIQLRVLWRKETSERARGVPSTKKSRRGPVLAICLLLIGAAVGGFAVSQYFVRQSDLESAALRGQLQTQLAQINATAERLERATLSEHASSARAADDR
Ga0210395_107421041	3300020582	Soil	MNIFDLDDKVAAAAVAAAGTVIGSLIQLRILWRKETSERSRGVPATKKSRRGPILAICLLLIGAAVGGFAFSRYLVQQSDLDSAAVRGQLQTQLAQISATAERLERATLRDHGASGHAA
Ga0210401_101051063	3300020583	Soil	VTAAAVAAAGTVIGSLIQLRVLWRKETSERSRGIPSTKKSRRGPVLAICLLLIGAAVGGFAVSQYLVRQSDLESAALRGQLQTQLA
Ga0179596_107048191	3300021086	Vadose Zone Soil	MNLFDLDDRVTAAAIAATGTIIGALIQLRFAWRREVSERARGAPVTKKSRRGPVLAVFVLLVAAGVGGFAFSQYLVKLSDRDSAAMRAELSTQLAQISATAARLESLSGYGPAGRANEDRHGADEVSVTTTVG
Ga0210400_109617732	3300021170	Soil	MNLFELDDRVTAAAVAATGTIIGAVIQLRAAWRREVSERARGAPVTKKSRRGPVLAVFLLVVSAGVGGFAFSQYLLMRHSDRESAAVRAELQQQVAQISATATRLEQASLRDHGPAARTDVDRAGTESVTMTTTVGPCR
Ga0210400_114166581	3300021170	Soil	MLDLDDKVTAAAVAAAGTVIGSLIQLRVSWRKEVSERARGVPATKKSRRGPVLAVGLLLVGAAAGGFAFSQYLVKQTDVETAALRTQLQAQLVQISETAARL
Ga0210400_114632981	3300021170	Soil	MSLFDLDDKVTAAAVAAAGTVIGTLIQLHVTWRREVSDRKRGVPATKKSRRGPVLAVCLLLIGAAVGGFAFSQYLVKQSDLESAALRAQLRTQLAQISATAERLERAALSDHGSSGRTADDRRG
Ga0210405_105173072	3300021171	Soil	MNIFDLDDKVAAAAVAAAGTVIGSLIQLRILWRKETSERSRGVPATKKSRRGPILAICLLLIGAAVGGFAFSRYLVQQSDLD
Ga0210408_100780612	3300021178	Soil	MLPFPFDLDDRVTAAAVTAVGTVIGALIQLRMAWRREVSERARGVPATKKSRRGPVVAVFLLLVAAAVGGFAFSQYLVDRSERESAALRGEMRTQLAQISATASRLEQATMSDHGRTVAADDDRGRGVEELTATTT
Ga0210393_100409171	3300021401	Soil	MSLFDLDDKVTAAAVAAAGTVIGTLIQLHITWRREVSERKRGVPATKKSRRGPLLAVGLLLIGAAVGGFAFSQYLVRKSDLESAALRVQLQSQLAQIGATAARLERAALSDHGSSGPTAEDRRGSEGVAATTT
Ga0210397_101103891	3300021403	Soil	VTAAAVAAAGTVIGSLIQLRVLWRKETSERSRGIPSTKKSRRGPVLAICLLLIGAAVGGFAVSQYLVRQSDLESAALRGQLQTQLAQINATAERLERATLSEHASSARAADDRRGAEALTVTTTI
Ga0210387_110762501	3300021405	Soil	MSLFDLDDKVTAAAVAAAGTVIGTLIQLHVTWRREVSDRKRGVPATKKSRRGPVLAVCLLLIGAAVGGFAFSQYLVKQSDLESAALRAQLRTQLAQISATAERLERAA
Ga0210386_103772762	3300021406	Soil	MAAGNGSSVALPDVFMNLFDLDDRVTAATVAAAGTVIGALIQMRVVWRKEVSERARGVPATKKSRRGPVLAVVLLVVGAAVGGFAFSRYLVRQSDLESAALRGQLQTQLAQISATAARLERATLSDHGSSVHAADDRRAPDGV
Ga0210386_113230421	3300021406	Soil	VTAAAVAAAGTVIGSLIQLRVLWRKETSERSRGIPSTKKSRRGPVLAICLLLIGAAVGGFAVSQYLVRQSDLESAALRGQLQTQLAQINATAERLERAALNE
Ga0210386_115998511	3300021406	Soil	MNLFEFDPKVSATAIAALGTVIGALAQLRMAWRKEVSERARGVPATKKSRRGPVMAVFLLLVAATVGGFVLSQYLMVRQSDRESAALRGDLQAQVARISATAERLERVNVSDRSSIVGTDGGRRGAEEVSVTTTV
Ga0210383_106157242	3300021407	Soil	VTAAAVAAAGTVIGSLIQLRVLWRKETSERSRGIPSTKKSRRGPVLAICLLLIGAAVGGFAVSQYLVRQSDLESAALRGQLQTQLAQINATAERLERATLSEHASSARAADDRRGAEALTVTTTIGPCRAAT
Ga0193709_11210861	3300021411	Soil	MSLFDLDDKVTAAAVAAAGTVIGTLIQLHVTWRREVSDRKRGVPATKKSRRGPVLAVCLLLIGAVVGGFAFSQYLVKQSDLESAALRVQLRTQLAQISATAERLERAALNDHASSGRAA
Ga0210394_109204541	3300021420	Soil	MNLLDLNEKVTAAAVAAAGTIIGTLMQVHLVRRKEASDRARGVPATKKSRRSLVSTVGLLLIGAALGGFAFSQYLVRQSDLESAAVRGQLQTQLAQISATAARLERATQSDHGSSARTTDDRREAESVVVTTTVGPCRAHAVVAPD
Ga0210394_114181611	3300021420	Soil	VTAAAVTAVGTVVGALIQLRLAWRREVSDRARGVPVTKKARRGPVLAVFLLLIAAGVGGFALSQYLVSRSEREATALNGEMRTQLAQISAT
Ga0210391_107333551	3300021433	Soil	MNPFDLDSRVAAAVAAVGTVIGALAQLRVAWRKEVSDRARGVPATKKSRRGPVWAVFLLLFAAAVGGFAFSQYLVRQSNRESAAVRGELQTQLARISATAERLERATLSDRDSTAREDNRHAAEDV
Ga0210390_106130202	3300021474	Soil	MNIFDLDDKVAAAAVAAAGTVIGSLIQLRILWRKETSERSRGVPATKKSRRGPILAICLLLIGAAVGGFAFSRYLVQQSDLESAAVRGQLQTQLAQISAN
Ga0210398_105736781	3300021477	Soil	MSLFDLDDKVTAAAVAAAGTVIGTLIQLHITWRREVSERKRGVPATKKSRRGPLLAVGLLLIGAAVGGFAFSQYLVRKSDLESAALRVQLQSQLAQIGATAARLERAALSDHGSGGRTADDRRGVDGVAATTTVGPC
Ga0210398_107645421	3300021477	Soil	VTAAAVAAAGTVIGSLIQLRVLWRKETSERSRGIPSTKKSRRGPVLAICLLLIGAAVGGFAVSQYLVRQSDLESAALRGQLQTQLAQINATAERLERATLSEHASSARAADDRRGAEALTVTTTIGPCRAA
Ga0210410_103088901	3300021479	Soil	MNLPNLDDKVTAAAIAAAGTVIGTLIQLKFAWRKEVSERARGVPATKKSRRGPVLAVGLLLIGAVVGGFAFSQYLVRQQSDLESATRHSELQTQLAQISATAARLERATQADHASSARTADDRRGAEGVAVTTTVGPCRARA
Ga0210410_112024492	3300021479	Soil	MNLFDLDDRVTAAAVAATGTIIGAVIQLRAAWRREVSERARGAPMTKKSRRGPVLAVFLLVFAAGVGGFAFSQYLVKQWDRDSAAAVRGELQQQLAQINATAQR
Ga0242654_102609651	3300022726	Soil	MSLFDLDDKVTAAAVAAAGTVIGTLIQLHVTWRREVSDRKRGVPATKKSRRGPVLAVCLLLIGAAVGGFAFSQYLVKQSDLESAALRAQLRTQLAQISATAERLERAALSDHGSSGRTADDRRGAEDVVATATVGPCR
Ga0179589_103642601	3300024288	Vadose Zone Soil	MNLFDLDDRVTAAAIAAAGTIIGTLIQLKFAWRKEVRERARGVPATKKSRRGPVLAVGLLLVGALVGGFVLSQYLVRQSDLDSAARHSQLQTQLAQISATAARLERETLSSHGSSGPVADDHGGAQSITVTTSVGACRARAVV
Ga0208935_10192552	3300025414	Peatland	MLDLDDRVIAAAIAAAGTVVGTLIQLHITWRREVSERARGVPASKKSRRGPVLAISLLLIGAAVGGFAFSQFLVRQSDLESAAIHSQLQMQLARMNA
Ga0207930_10275813	3300025604	Arctic Peat Soil	MNLIDLDDKVTAAAVAAAGTVIGTLIQLHVTWRKEVSERKRGVPATKKSRRGPVLAVSLLLIGAAVGGFAFSQYLVRQSDLESAALRGQLQTQLAQISATAARLERAALSDHGSSGRPA
Ga0207654_108171541	3300025911	Corn Rhizosphere	MNLGLDDNVVAAAVAAAGTVIGALIQLRITWRKEVSERARGVPMTKKSRRGPVLAVGLLLSAAAVGGFAFSQYLMKQSDREAAALRDGELQAQLTQIRATAERLERVTLNDHSSSARTADGEGVSVTTT
Ga0207694_107591382	3300025924	Corn Rhizosphere	MNLGLDDNVVAAAVAAAGTVIGALIQLRITWRKEVSERARGVPMTKKSRRGPVLAVGLLLSAAAVGGFAFSQYLMKQSDRESAAL
Ga0207709_106474582	3300025935	Miscanthus Rhizosphere	MNLGLDDNVVAAAVAAAGTVIGALIQLRITWRKEVSERARGVPMTKKSRRGPVLAVGLLLSAAAVGGFAFSQYLMKQSDRESAALRDGELQAQLTQI
Ga0207704_113952171	3300025938	Miscanthus Rhizosphere	MNLGLDDNVVAAAVAAAGTVIGALIQLRITWRKEVSERARGVPMTKKSRRGPVLAVGLLLSAAAVGGFAFSQYLMKQSDREAAALRDGELQAQLTQIRATAERLERV
Ga0207711_101578673	3300025941	Switchgrass Rhizosphere	MNLGLDDNVVAAAVAAAGTVIGALIQLRITWRKEVSERARGVPMTKKSRRGPVLAVGLLLSAAAVGGFAFSQYLMKQSDRESAALRDGELQAQLTQIRATAERLERVTLNDHSSSARTANGEGVSVTTTV
Ga0209332_10676751	3300027439	Forest Soil	MNLLDLDDKVTAAAIAAAGTVIGTLIQLKFAWRKEVSERARGVPASKKSRRGPVLAVGLLLVGAVVGGFAFSQYLVRQSDVESAARHSELQTQLAQISATAARLERASLSDHGSSGPSADDRRGAEGVAVTTTVGPC
Ga0209330_10668671	3300027619	Forest Soil	MSLFDLDDKVTAAAVAAAGTVIGTLIQLHVTWRREVSERKRGVPATKKSRRGPVLAVCLLLIAAAVGGFAFSQYLVRQSDLESAALRVQLQAQLAQIGVTAARLERAALSDRGSSGRTADDRRGAEGVAAT
Ga0209007_11867581	3300027652	Forest Soil	MSLFDLDDKVTAAAVAAAGTVIGTLIQLHVTWRREVSERKRGVPATKKSRRGPVLAVSLLLIAAAVGGFAFSQYLMRQSDLESAALRVQLQAQLAQI
Ga0209446_10752532	3300027698	Bog Forest Soil	VNIFDLDDRVTAAAVAAAGTVIGALIQMRFVWRKEVSERSRGEPVTKKSRRGPVLAVCLLLIGAGVGGFAFSQYLVRQSDLESAALRGQLQTQLAQINATA
Ga0209167_105912051	3300027867	Surface Soil	MLDLDDKVTAAAVAAAGTVIGSLIQLRVSWRKEVSERARGVPATKKSRRGPVLAVGLLLVGAAAGGFAFSQYLVKQTDVETAALRTQLQAQLVQISETAARLERVALSDHGSGGRSAVDHHDT
Ga0209006_104064841	3300027908	Forest Soil	MNLFDLDDKVTAAAIAAAGTVIGTLIQLKFAWRKEVSERARGVPASKKSRRGPVLAVCLLLVGAVVGGFAFSQYLVRQSDVESAARHSELQTQLAQISATAARLERASLSDHGSSGPSAENRRGAEGVAVTTTVGPCRS
Ga0209526_102335682	3300028047	Forest Soil	MNLFDIDTKVSATAVAAVGTVIGALAQLRVAWRKEVSERARGVPATKKSRRGPVLAVFLLLVAAMVGGFVLSQYLTRQSDRESAALRGDLQAQVARISATAERLERVPVHVIPCIEDYTKGGAHAG
Ga0310039_100992381	3300030706	Peatlands Soil	MNLFDLDDRVTAAAVAAAGTIIGALIQLRVAWRKEVSERARGVPLTKKSRRGPVLAVLLLLIAAGVGGFALSQYLVSQSDRESAALRGELQTQLAQISATAERLERATLGDHGPTARADDFHRGAED
Ga0170824_1007204642	3300031231	Forest Soil	MNLFDLDDKVTAAAVAAAGTVIATLIQLHVTRRKEASERARGVPATKKSRRGPVIAVTLLIIGAAVGGFAFSQYLVRQSDLESAALRGQ
Ga0170824_1139596391	3300031231	Forest Soil	MNLFEFDPKVSATAVAALGTVIGALAQLRIAWRKEVSERARGVPATKKSRRGPVLAVFLLLVAATVSGFVMSQYLMVRQSDRESAALRGDLQAQV
Ga0307508_108934661	3300031616	Ectomycorrhiza	DVQKTGTTSQFAAGSGVTLIACAAVWPGSLMNLFEFDPKVSATAVAALGTVIGALAQLRMAWRKELSERARGVPATKKSRRGPVLAVFLLLVAATVGGFVLSQFLMVRQSDRESAALRGDLQAQVARISASAERLERVTLGDHSSTSDGDRHGVDEATVTTTVGPCRAVP
Ga0310686_1174809411	3300031708	Soil	MNIFNLDEKVAAAAVAAAGTVIGTLIQLHVVWRKELSERRRGVPATKKSRRGPVMAVFLLLIGAGVGGFVFSQYLVRQSDIESAALRGQLQKQLAQISATAE
Ga0307474_101539691	3300031718	Hardwood Forest Soil	MSLFDLDDKVTAAAVAAAGTVIGTLIQLHITWRREVSERKRGVPATKKSRRGPLLAVGLLLIGAAVGGFAFSQYLVRQSDLESAALRAQLQTQLAQISATAARL
Ga0307474_104611231	3300031718	Hardwood Forest Soil	MNLFEFDPKVSATAVAALGTVIGALAQLRMAWRKEVAERARGVPATKKSRRGPVLAVVLLLVAATVAGFVLSQYLMARQSDRESAALRGDLQAQVARISAT
Ga0307477_100714473	3300031753	Hardwood Forest Soil	MNLFDLDDKVTAAAVAAAGTVIGSLIQLRVSWRKEVSERARGVPATKKSRRGPVLAVGLLLIGAAAGGFAFSQYLVKQSDLDTAALRGQLQTQLAQIS
Ga0307478_105258351	3300031823	Hardwood Forest Soil	MNLFEFDPKVSATAIAALGTVIGALAQLRMAWRKEVSERARGVPATKKSRRGPVLAVFLLLVAATVGGFVLSQYLMVRQSDRESAALRGDLQAQVARISATAERLERVNVSDRSSIVGTD
Ga0307471_1028138431	3300032180	Hardwood Forest Soil	MNLGLDDNVVAAAVAAAGTVIGALIQLRVTWRKEVSERARGVPLTKKSRRGPVLAVGLLLSAAAVGGFAFSQYLMKQSDREAAALRDGELQAQLTQI
Ga0335082_111931361	3300032782	Soil	MHLLDLDDKVAAAAIAAAGTVIGAIIQLKIAWRKEMSERARGAPVTKKTRRGPVVAVGLLLVAAAVGGFALSQYFIARSDRESAAVRGELQSQL
Ga0370515_0486789_1_264	3300034163	Untreated Peat Soil	MNLHDLDEKIAAAAVAATGTIIGTLIQLHVARRKEAAERARGGPAAKSAKKSRRNLVLAGGLLLVGAALGGFAFSQYLVRQSDLESAA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084488

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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