Metagenome / Metatranscriptome Family F084484

Basic Information
Family ID	F084484
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	81 residues
Representative Sequence	AYLTAYSAPGFTFECPGYALGHEAMTCINEPGACPGESLIAIADPCAHAYMNEASNSWVLTGQSSAPIDPYGAC
Number of Associated Samples	96
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.82

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (43.750 % of family members)
Environment Ontology (ENVO)	Unclassified (45.536 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (48.214 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.63% β-sheet: 12.75% Coil/Unstructured: 68.63%
Feature Viewer

Powered by Feature Viewer

SCOP family	SCOP domain	Representative PDB	TM-score
d.92.1.14: Anthrax toxin lethal factor, N- and C-terminal domains	d4dv8a2	4dv8	0.61587
d.92.1.14: Anthrax toxin lethal factor, N- and C-terminal domains	d1j7na1	1j7n	0.57949
d.92.2.3: Hyaluronidase N-terminal domain-like	d2choa3	2cho	0.57039
c.3.1.2: FAD-linked reductases, N-terminal domain	d1ryia1	1ryi	0.5678
d.92.1.2: Thermolysin-like	d1u4ga_	1u4g	0.56507

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF02515	CoA_transf_3	23.21
PF00027	cNMP_binding	12.50
PF03061	4HBT	3.57
PF01594	AI-2E_transport	2.68
PF01037	AsnC_trans_reg	1.79
PF02146	SIR2	1.79
PF08282	Hydrolase_3	0.89
PF00884	Sulfatase	0.89
PF07690	MFS_1	0.89
PF00441	Acyl-CoA_dh_1	0.89
PF12681	Glyoxalase_2	0.89
PF03704	BTAD	0.89
PF00563	EAL	0.89
PF14137	DUF4304	0.89
PF04168	Alpha-E	0.89
PF10509	GalKase_gal_bdg	0.89
PF00535	Glycos_transf_2	0.89
PF04542	Sigma70_r2	0.89
PF05977	MFS_3	0.89
PF08239	SH3_3	0.89
PF13392	HNH_3	0.89
PF03795	YCII	0.89
PF00106	adh_short	0.89
PF13191	AAA_16	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	23.21
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	2.68
COG0846	NAD-dependent protein deacetylase, SIR2 family	Posttranslational modification, protein turnover, chaperones [O]	1.79
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.89
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.89
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.89
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.89
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.89
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	0.89
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.89
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.89
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.89
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.89
COG2307	Uncharacterized conserved protein, Alpha-E superfamily	Function unknown [S]	0.89
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	0.89
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.89
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.89
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	0.89
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.89
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.89
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.89
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.89

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.11%
Host-Associated	Host-Associated	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.96%
Aquatic	Environmental → Aquatic	7.14%
Plants	Host-Associated → Plants	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.50%
Freshwater	Environmental → Aquatic → Freshwater	4.46%
Peat	Environmental → Terrestrial → Peat	2.68%
Sediment	Environmental → Aquatic → Sediment	1.79%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.79%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.89%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.54%
Loam	Environmental → Terrestrial → Soil → Loam	8.04%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.36%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.57%
Clay	Environmental → Terrestrial → Soil → Clay	3.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.79%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.79%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.89%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	58.93%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.25%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.46%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	3.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.79%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.79%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.89%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.89%
Mine Drainage	Environmental → Aquatic → Freshwater → Groundwater → Mine Drainage	0.89%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	43.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.82%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.25%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.36%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	3.57%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.68%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.79%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.89%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.89%
Sediment	Environmental → Aquatic → Freshwater → Groundwater → Mine Drainage → Sediment	0.89%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.89%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.89%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.89%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010387	Acid mine drainage microbial communities from Malanjkhand copper mine, India - M8 k-mer 51	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024176	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026869	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 53 (SPAdes)	Environmental	Open in IMG/M
3300026887	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 49 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027968	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070713_1010321821	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AYSAPGFTFECPGYALGHEAMTCVNEAGVCANEDLIAIADPCAAAYMNEASNSWVMTGASDAPIDPYGACP*
Ga0066704_109960562	3300005557	Soil	APPLSSGGGCAAALAYLGAHSAPGFQFECPGYALGHQAMTCVNVAGVCPGVKLIVISDACPAAYMNEAHNSWIVAGLTTGAIDPYGYCH*
Ga0070766_100321162	3300005921	Soil	VWGCAAALEYLSAYSYPGFTFECPGNALGREGMTCLNEAGVCPGEAIIAIADACPAAYMNEASNSWVLEGRSNAPIDPYGTCP*
Ga0075017_1000714885	3300006059	Watersheds	MQQETGYGCGPALAYLTAHAAPGFQLVCPGYANGRQALTCVGIPGFCPGSLKLIVINDPCPAAYMNEASNSWV
Ga0075017_1002397341	3300006059	Watersheds	PATTTTAPAGAGLGAYGCPAALAWLSAHSAPGFQFECPGYALGRQAMTCYNVAGVCPDGEKLIAIAVPCAAAYMNEAHNSWIIAGLAKGPIDPYGYCH*
Ga0070765_1011086781	3300006176	Soil	ALPYLAAYAAPGFTFQCPGYSLGHQAMTCINQPGVCDNERLIVISDPCPAAYMNEASNSWVLTGASDAPIDPYGACS*
Ga0102924_11639112	3300007982	Iron-Sulfur Acid Spring	VGQATAWGCAAALAYLSAYADPDFTLECPGNALGREAMTCDDQAGVCDNEKLIAIADPCPAAYMNEASNSWVLAGESTAPIDPYGMC*
Ga0116214_10344362	3300009520	Peatlands Soil	MNAAVPPLGHATTWGCAAALTYLRAYAAPGFAVECPGIGEGRQAMTCINEPGICTNAQVIAITDACPAAYMNEASNTWVLTGQSVAPLDPYGSCP*
Ga0116106_10281761	3300009645	Peatland	LTYLAAYAAPGFTVECPGYANGHQAMTCVDDPPSCGAEQKLIAIAVPCPAAYMNEASNSWVLTAQSDAVIDPYGYCR*
Ga0116215_10394703	3300009672	Peatlands Soil	LAYLGAYAAPGFTLECPGYAEGHDAMTCVAEANACPNARVIAIADPCPAAYMNEASNSWVLSGASDAPVDPYGSCP*
Ga0116224_101232582	3300009683	Peatlands Soil	MNAAVPPLGHATTWGCAAALTYLRAYAAPGFAVECPGIGEGRQAMTCINEPGICTNAQVIAIADACPAAYMNEASNSWVLTGQSVAPLDPYGSCP*
Ga0116216_106304712	3300009698	Peatlands Soil	AYAAPGFTLECPGYAEGHDAMTCVAEANACPNARVIAIADPCPAAYMNEASNSWVLSGASDAPVDPYGSCP*
Ga0134125_113220801	3300010371	Terrestrial Soil	LSYLSAYAYPGFTLECTGDALGREGMTCLNEAGVCPGEAIIAIADACPAAYMNEASNSWVLEGQSTAPIDPYGTC*
Ga0134128_106738122	3300010373	Terrestrial Soil	LSYLSAYAYPGFTLECPGNALGREGMTCLNEAGVCPGEAIIAIADACPAAYMNEASNSWVLEGQSTAPIDPYGTC*
Ga0136821_14024411	3300010387	Sediment	AYGCAAALAWLASHSAPGFQFVCPGNALGHEAMTCVNVRGLCPGERLITIADPCPAAYMNEASNSWVQTHLRPGRLDPYGXXXXXXX
Ga0182024_104964761	3300014501	Permafrost	VHEAAAAVSNGYGCAPAVAYLQVHAAPGFTIECPGWADGHQAMSCDNVAGVCPGAKMIAISTPCPAAYMNEASNSWVLLGKSNAALDPYGYCP*
Ga0182033_103978322	3300016319	Soil	WGCAAAMTYLSAYAYPGFTFECPGNAIGREAMTCLNEPGICPGEAIIAIADACPAAYMNEASNSWVLEGQSTAPVDPYGAC
Ga0182032_109014772	3300016357	Soil	ALAYLRAYAAPGFTLECPGYAEGHQGMTCVDDQAGCPNGPLIAIADPCPQTYMNEASNSWVVTGQSDAPIDPYGACP
Ga0182032_111341422	3300016357	Soil	NALPAKGEATASGCAAALSYLSAYAAPGFTFQCPGYALGHQAMTCINQAGVCANEDLIAIADPCAVAYMNEASNSWVMTGASDAPIDPYGACAS
Ga0182032_119184042	3300016357	Soil	FAVECPGNAMGREAMTCKNEPGMCPGQLVIAIADPCPAAYMNEASNSWVLMGASAASLDPYGAC
Ga0182040_117493981	3300016387	Soil	WLSGNAAPGFQFICPGYALGHQAMTCYRVASVCPNQPVIAIADPCPAAYMNEASNSWVLTGRRPGPIDPFGYCE
Ga0182037_114050161	3300016404	Soil	ATAYGCAAALAYLAAYSAPGFTFQCPGSALGHEAMTCIDEPGVCDNEHLIAIADACPAAYMNEASNSWVLTGSSAAPIDPYGACP
Ga0187820_12028312	3300017924	Freshwater Sediment	PQPAPKSVPAVAAVASSYGCGSAIAYLSANSAPGFRFECPGYALGHQAMTCVNVAGVCPGSHLIVISDPCQAAYMNEASNSWVLEGLRRAPIDPYGYCH
Ga0187780_103064642	3300017973	Tropical Peatland	GCGAALSYLATHAAPGFRFECPGYALGHQAMTCIDVPGVCPGSHLIVIDVPCSAAYMNEASNSWVLEGLRHAPIDPYGYCH
Ga0187777_101653132	3300017974	Tropical Peatland	HAAPGFRFECPGYALGHQAMTCIDVPGVCPGSHLIVIDVPCSAAYMNEASNSWVLEGLRHAPIDPYGYCH
Ga0187777_111878951	3300017974	Tropical Peatland	AAVAYDTAYAYPGFSVECPGDAQGRQAMTCINEPGLCPGQQVIVIADACPAAYMNEASNSWVLKGASTGPIDPYGGCG
Ga0187815_105194691	3300018001	Freshwater Sediment	TGTYGCGPALAYLSAHAAPGFRFVCPGYALGHQAMTCINVAGVCPGSHLIVINDPCQAAYMNEASNSWVLEGLRRAPVDPYGYCH
Ga0187869_102673441	3300018030	Peatland	LTYLAAYAAPGFTVECPGYANGHQAMTCVDDPPSCGAEQKLIAIAVPCPAAYMNEASNSWVLTAQSDAVIDPYGYCR
Ga0210401_1001043911	3300020583	Soil	YAYPGFTFECPGNALGREGMTCLNEAGVCPGEAVIAIADACPAAYMNEASNSWVLEGRSTALIDPYGSC
Ga0210405_102840302	3300021171	Soil	VWGCAAAVAYLSAYSYPGFTFECPGNALGREGMTCLNEAGVCPGEAIIAIADACPAAYMNEASNSWVLEGRSNAPIDPYGTCP
Ga0210408_109131672	3300021178	Soil	VWGCAAAVAYLSAYSYPGFTFECPGNALGREGMTCLNEAGVCPGEAIIAIADACPAAYMNEASNSWVLEGQSTAPIDPYGTCP
Ga0210396_102709201	3300021180	Soil	AYLSAYSAPGFTFECPGYALGHQAMTCINEPGVCANENLIAIADACAVAYMNEASNSWVMTGASDAPIDPYGACS
Ga0213875_105646731	3300021388	Plant Roots	ERQSSPVTAPARPAGYGCEAALSYLAGHAAPGFRFQCPGYALGHEAMTCVDYASVCPDSKLIVIADPCPAAYKNEASNSWVLTKQSTRPIDPYGAC
Ga0210389_106184972	3300021404	Soil	LAYLTAYAYPGFALECPGDAQGRQGMTCIDVPGACPGEHVIAIADACPQAYMNEASNSWVLMGRSDAPIDPYGSC
Ga0210387_110114432	3300021405	Soil	ECPGDAAGRQGMTCIDVPGACPNQRVIAIADACPAAYMNEASNSWVLTGRSSAPIDPFGGCA
Ga0210386_103534131	3300021406	Soil	EYGCEAALSYLATYSAPGFTFECPGTALGHQAMTCIDEPGVCDNEHLIAIADPCPAAYMNEASNSWVLTGASATPIDPYGSCS
Ga0210390_100091776	3300021474	Soil	VAAVAYLAVYAYPGFRFECPGNALGREGMTCVNQAGVCPNEEIIAIADACPAVYMNEASNSWVLEGKSTAPIDPYGSC
Ga0242665_100045471	3300022724	Soil	VWGCAAAMVYLSVYAYPGFTFECPGNALGREGMTCLNEAGVCPGEAIIAIADACPAAYMNEASNSWVLEGRSNAPIDPYGTCP
Ga0224565_10242021	3300024176	Plant Litter	SAGGYGCGPALSYLATHAAPGFRFECPGWADGHQAMTCMNVPGVCAGSDVIAISTPCAAAYMNEASNSWVLSGKSDAPIDPYGYCS
Ga0207700_117872082	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	APATTHQLATTTSHSAPAAQTPSASGYGCGPALAYLEAHSAPGFHFECPGYSLGHQAMTCINIAGVCAGEKLIVISIPCRAAYMNEASNSWSVQGLSNAPIDPYGYCH
Ga0207821_10204222	3300026869	Tropical Forest Soil	LTAYSAPGFTFECPGYALGHEAMTCINEPGACPGESLIAIADPCAHAYMNEASNSWVLTGQSSAPIDPYGAC
Ga0207805_10275411	3300026887	Tropical Forest Soil	SGFTFECPGYALGHEAMTCINEPGACPGESLIAIADPCAHAYMNEASNSWVLTGQSSAPIDPYGAC
Ga0208043_11706822	3300027570	Peatlands Soil	AAPGFAVECPGIGEGRQAMTCINEPGICTNAQVIAITDACPAAYMNEASNTWVLTGQSVAPLDPYGSCP
Ga0207826_11567252	3300027680	Tropical Forest Soil	TVPALPARGEATAYGCAAALAYLTAYSAPGFTFECPGYALGHEAMTCINEPGACPGESLIAIADPCAHAYMNEASNSWVLTGQSSAPIDPYGAC
Ga0209006_108205441	3300027908	Forest Soil	YLATYSAPGFTFECPGTALGHQAMTCIDEPGVCDNEHLIAIADPCPAAYMNEASNSWVLTGASAAPIDPYGSCS
Ga0209061_11532491	3300027968	Surface Soil	GRSTPVTTAVEPTPPAPPTTARASGSASGCDAALRWLSTHAAPGFAFECPGYALGHQAMTCVNVAGVCSGERIIAIADACPAAYMNEAHNSWILAGLTTGPLDPYGYC
Ga0308309_108528962	3300028906	Soil	YLAAYAAPGFTFECPGYSLGHQAMTCINQPGVCDNERLIVISDPCPAAYMNEASNSWVLTGASDAPIDPYGACS
Ga0311339_102073531	3300029999	Palsa	SATRSSAKAVTPPSPAHGYGCGPALSYLATHSAPGFHFECPGNALGHQAMTCINVAGVCPGTRLIVINVPCSAAYMNEASNSWVLDGLRSAPIDPYGYCG
Ga0310037_101618432	3300030494	Peatlands Soil	LTYLRAYAAPGFAVECPGIGEGRQAMTCINEPGICTNAQVIAIADACPAAYMNEASNSWVLTGQSVAPLDPYGSCP
Ga0311357_113915141	3300030524	Palsa	QGFTFECPGYAEGHEAMTCLNTEGVCPSSAVIAIADPCPEAYMNEASNSYVITGVADTPIDPYGACPSS
Ga0310038_100277232	3300030707	Peatlands Soil	MNAAVPPLGHATTWGCAAALTYLRAYAAPGFAVECPGIGEGRQAMTCINEPGICTNAQVIAIADACPAAYMNEASNSWVLTGQSVAPLDPYGSCP
Ga0302180_106314731	3300031028	Palsa	SAKAVTPPSPAHGYGCGPALSYLATHSAPGFHFECPGNALGHQAMTCINVAGVCPGTRLIVINVPCSAAYMNEASNSWVLDGLRSAPIDPYGYCG
Ga0318534_102814222	3300031544	Soil	VWGCAAAMTYLSAYAYPGFTFECPGNAIGREAMTCLNEPGICPGEAIIAIADACPAAYMNEASNSWVLEGQSTAPVDPYGAC
Ga0318534_107069341	3300031544	Soil	PALPARGEATASGCSAALAYLAAYAAPGFTFACPGYALGHEAMTCINEPGACPGEDLIAIADPCAHAYMNEASNSWVLTGQSSAPIDPYGPC
Ga0318571_104103672	3300031549	Soil	PPGVAPPRGQASVWGCAAAMTYLSAYAYPGFTFECPGNAIGREAMTCLNEPGICPGEAIIAIADACPAAYMNEASNSWVLEGQSTAPVDPYGAC
Ga0318528_101610382	3300031561	Soil	TYAYPGFAVECPGNAMGREAMTCKNEPGMCPGQLVIAIADPCPAAYMNEASNSWVLMGASAASLDPYGAC
Ga0318528_105898601	3300031561	Soil	PPPAPPALPGRGSATTYGCAAALTYLAAYSAPGFTFQCPGSALGHEAMTCIDEPGVCDNEHLVAIADPCPAAYMNEASNSWVLTGASSAPIDPYGACP
Ga0318573_101783661	3300031564	Soil	GFTFECPGNAIGREAMTCLNEPGICPGEAIIAIADACPAAYMNEASNSWVLEGQSTAPVDPYGAC
Ga0318555_103062032	3300031640	Soil	GCAAAIAYDTTYAYPGFAVECPGNAMGREAMTCKNEPGMCPGQLVIAIADPCPAAYMNEASNSWVLMGASAASLDPYGAC
Ga0318542_104979371	3300031668	Soil	AVECPGNAMGREAMTCKNEPGMCPGQLVIAIADPCPAAYMNEASNSWVLMGASAASLDPYGAC
Ga0307374_102159642	3300031670	Soil	GFALECPGYAEGHQAMTCLNVAGVCPGSAVIAIADACPQAYMNEASNSYVITGTSDAAIDPYGSCP
Ga0307374_104065672	3300031670	Soil	GCGPALAYLASHAAPGFSFECPGYADGRQAMTCINIAGLCPGERLIAIAVPCAAAYMNEASNSWVLIHESSAPIDPYGYCQ
Ga0307374_105330682	3300031670	Soil	KPTPVALPSPTPGGCAAALTYLASHSAPGFIFRCPGYALGHQAMTCVDVAGVCPGLKEIVIAKACPASWMNEASNSWVLTGLSNRMIDPYGFCA
Ga0307373_104682642	3300031672	Soil	RATPVQPNVSAAPPNGYGCGYALAYLSAHAAPGFSFECPGYSEGHQAMTCVNVPGLCSGTKLIAITVPCAAAYMNEASNSWVLTGESHAPIDPYGYCQS
Ga0310686_1135798621	3300031708	Soil	HAAPGFSFECPGYADGHQAMTCENIPGLCPGTSLIAIAVPCAAAYMNEASNSWVLTGKSDAPIDPYGYCG
Ga0310686_1186329602	3300031708	Soil	LAYLTAYAYPGFTLECPGDAQGQQGMTCIDVPGACPGEHLIAIADACPQAYMNEASNSWVLMGRSDAPIDPYGSC
Ga0306917_109264732	3300031719	Soil	FTFECPGYALGHEAMTCINEPGACPGESLIAIADPCAHAYMNEASNSWVLTGQSSAPIDPYGAC
Ga0318493_100321633	3300031723	Soil	AYLTAYSAPGFTFECPGYALGHEAMTCINEPGACPGESLIAIADPCAHAYMNEASNSWVLTGQSSAPIDPYGAC
Ga0318494_103387813	3300031751	Soil	YLSAYAAPGFTFQCPGYALGHQAMTCINQAGVCANEDLIAIADPCAVAYMNEASNSWVMTGASDAPIDPYGACAS
Ga0307477_107648531	3300031753	Hardwood Forest Soil	APEVHVVSITHPASAPPAPATPSGYGCAAALSYLAAHAAPGFRFECPGYALGHQAMTCLNEPGVCPGYGLIAISIPCAAAYMNEAHNSWVVLGDASGIDPYGYCH
Ga0307475_110613302	3300031754	Hardwood Forest Soil	GFTFECPGYALGREGMTCINEAGVCPGEEVIAIADACPAAYMNEASNSWVMVGQSTAPIDPYGAC
Ga0318537_100831912	3300031763	Soil	PGVAPPRGQASVWGCAAAMTYLSAYAYPGFTFECPGNAIGREAMTCLNEPGICPGEAIIAIADACPAAYMNEASNSWVLEGQSTAPVDPYGAC
Ga0318535_105607532	3300031764	Soil	AYAGGPPPVGQATAWGCAAAIAYDTTYAYPGFAVECPGNAMGREAMTCKNEPGMCPGQLVIAIADPCPAAYMNEASNSWVLMGASAASLDPYGAC
Ga0318509_102256822	3300031768	Soil	AYSAPGFTFECPGYALGHEAMTCINEPGACPGESLIAIADPCAHAYMNEASNSWVLTGQSSAPIDPYGAC
Ga0318509_108446642	3300031768	Soil	PSGYGCAAALAYLAAHAAAGFTFECPGYAMGRQGMTCMNQPGICPGQNVIAIADPCPQTYMNEASNSWVVIGASDAPIDPYGACP
Ga0318546_100212534	3300031771	Soil	AQSSPPGVAPPRGQASVWGCAAAMTYLSAYAYPGFTLECPGNALGREAMTCLNEPGICPGEAIIAIADACPAAYMNEASNSWVLEGQSTAPVDPYGAC
Ga0318543_104846942	3300031777	Soil	LSYLSAYAAPGFTFQCPGYALGHQAMTCINQAGVCANEDLIAIADPCAVAYMNEASNSWVMTGASDAPIDPYGACAS
Ga0318566_102260621	3300031779	Soil	TTYAYPGFAVECPGNAMGREAMTCKNEPGMCPGQLVIAIADPCPAAYMNEASNSWVLMGASAASLDPYGAC
Ga0318547_101327571	3300031781	Soil	ATASGCAAALSYLSAYAAPGFTFQCPGYALGHQAMTCINQAGVCANEDLIAIADPCAVAYMNEASNSWVMTGASDAPIDPYGACAS
Ga0318576_104965321	3300031796	Soil	TFECPGYALGHEAMTCINEPGACPGESLIAIADPCAHAYMNEASNSWVLTGQSSAPIDPYGAC
Ga0318550_102729472	3300031797	Soil	AYDTTYAYPGFAVECPGNAMGREAMTCKNEPGICPGQLVIAIADPCPAAYMNEASNSWVLMGASAASLDPYGAC
Ga0318523_103721482	3300031798	Soil	WGCAAAIAYDTTYAYPGFAVECPGNAMGREAMTCKNEPGICPDQLVIAIADPCPAAYMNEASNSWVLMGASAASLDPYGAC
Ga0318497_104442852	3300031805	Soil	ASGCAAALSYLSAYAAPGFTFQCPGYALGHQAMTCINQAGVCANEDLIAIADPCAVAYMNEASNSWVMTGASDAPIDPYGACAS
Ga0318499_103706402	3300031832	Soil	YLAAYAAPGFTFACPGYALGHEAMTCINEPGACPGEDLIAIADPCAHAYMNEASNSWVLTGQSSAPIDPYGPC
Ga0318512_102301192	3300031846	Soil	PPAPTVPALPARGEATAYGCAAALAYLTAYSAPGFTFECPGYALGHEAMTCINEPGACPGESLIAIADPCAHAYMNEASNSWVLTGQSSAPIDPYGAC
Ga0318527_105079041	3300031859	Soil	AYPGFAVECPGNAMGREAMTCKNEPGMCPGQLVIAIADPCPAAYMNEASNSWVLMGASAASLDPYGAC
Ga0318527_105193221	3300031859	Soil	GSATTYGCAAALTYLAAYSAPGFTFQCPGSALGHEAMTCIDEPGVCDNEHLVAIADPCPAAYMNEASNSWVLTGASSAPIDPYGACP
Ga0318527_105326752	3300031859	Soil	GSVAPPPSQFGCGPALAYLAAHAAPGFRFECPGYSLGHQAMTCINVAGVCSDEKLIVITIPCRAAYMNEASNSWSMQGLSSAPIDPYGYCH
Ga0306925_106251463	3300031890	Soil	APGFTFQCPGYALGHQAMTCINQAGVCANEDLIAIADPCAVAYMNEASNSWVMTGASDAPIDPYGACAS
Ga0318536_100330062	3300031893	Soil	VWGCAAAMTYLSAYAYPGFTFECPGNALGREAMTCLNEPGICPGEAIIAIADACPAAYMNEASNSWVLEGQSTAPVDPYGAC
Ga0306921_106685131	3300031912	Soil	ASGCSAALAYLAAYAAPGFTCAGPGYALGHEAMTCINEPGACPGEDLIAIADPCAHAYMNEASNSWVLTGQSSAPIDPYGPC
Ga0310909_110605091	3300031947	Soil	SVPALPARGEATASGCSAALAYLAAYAAPGFTFACPGYALGHEAMTCINEPGACPGEDLIAIADPCAHAYMNEASNSWVLTGQSSAPIDPYGPC
Ga0318563_102834112	3300032009	Soil	ACPTGGGPPAPAYAGGPPPVGQATAWGCAAAIAYDTTYAYPGFAVECPGNAMGREAMTCKNEPGMCPGQLVIAIADPCPAAYMNEASNSWVLMGASAASLDPYGAC
Ga0318507_103768762	3300032025	Soil	RRRSPRRERGEPERWARAALAYLTAYSAPGFTFECPGYALGHEAMTCINEPGACPGESLIAIADPCAHAYMNEASNSWVLTGQSSAPIDPYGAC
Ga0318556_100734731	3300032043	Soil	AYAAPGFTLECPGYAEGHQGMTCVDDQAGCPNGPLIAIADPCPQTYMNEASNSWVVTGQSDAPIDPYGACP
Ga0318575_103007912	3300032055	Soil	VVPVRAALAYLTAYSAPGFTFECPGYALGHEAMTCINEPGACPGESLIAIADPCAHAYMNEASNSWVLTGQSSAPIDPYGAC
Ga0318505_103683701	3300032060	Soil	GFAVECPGNAMGREAMTCKNEPGICPDQLVIAIADPCPAAYMNEASNSWVLMGASAASLDPYGAC
Ga0318513_101981032	3300032065	Soil	ASVWGCAAAMTYLSAYAYPGFTFECPGNALGREAMTCLNEPGICPGEAIIAIADACPAAYMNEASNSWVLEGQSTAPVDPYGAC
Ga0318514_101054552	3300032066	Soil	APAYAGGPPPVGQATAWGCAAAIAYDTTYAYPGFAVECPGNAMGREAMTCKNEPGMCPGQLVIAIADPCPAAYMNEASNSWVLMGASAASLDPYGAC
Ga0318525_100304371	3300032089	Soil	YLTAYSAPGFTFECPGYALGHEAMTCINEPGACPGESLIAIADPCAHAYMNEASNSWVLTGQSSAPIDPYGAC
Ga0318525_102709711	3300032089	Soil	AGGPPPVGQATAWGCAAAIAYDTTYAYPGFAVECPGNAMGREAMTCKNEPGMCPGQLVIAIADPCPAAYMNEASNSWVLMGASAASLDPYGAC
Ga0318540_102896832	3300032094	Soil	AALSYLSAYAAPGFTFQCPGYALGHQAMTCINQAGVCANEDLIAIADPCAVAYMNEASNSWVMTGASDAPIDPYGACAS
Ga0307470_111551071	3300032174	Hardwood Forest Soil	AYLSAYAHPGFTFECPGNALGRQGMTCLNEAGVCPGEALIAIADACPAAYMNEASNSWVLEGQSTAPIDPYGAC
Ga0307471_1029075952	3300032180	Hardwood Forest Soil	HVVSITHPASAPPAPATPSGYGCAAALSYLAAHAAPGFRFECPGYALGHQAMTCLNEPGVCPGYGLIAISIPCAAAYMNEAHNSWVVLGDASGIDPYGYCH
Ga0307471_1035111011	3300032180	Hardwood Forest Soil	FECPGNALGHQAMTCMNEPGVCANENLIAIADPCPAAYMNEASNSWVLTGASDAPIDPYGACS
Ga0307471_1040144861	3300032180	Hardwood Forest Soil	VWGCAAAEAYLSAYAYPGFTVECPGYALGREGMTCLNEAGVCPGEAIIAIADACPAVYMNEASNSWVLEGQATAPIDPYGAC
Ga0306920_1001742234	3300032261	Soil	YDTTYSYPGFAVECPGNAMGREAMTCKNEPGMCPGQLVIAIADPCPAAYMNEASNSWVLMGASAASLDPYGAC
Ga0306920_1023320052	3300032261	Soil	VPPVGQATASGCAAAIAYDTAYSYPGFIVECPGNALGREAMTCKDEPGICPGQLVIAIADPCPAAYMNEAANSWVLMDASSGSLDPFGVC
Ga0348332_119620952	3300032515	Plant Litter	SDSASGSSVAGYGCSYALSYLRVHAAPGFSFECPGWADGHQAMTCENIAGLCPGAKVIAIAVPCSAAYMNEASNSWVLLGLRNAPIDPYGYCPE
Ga0335078_123919062	3300032805	Soil	GFTFECPGYAEGHQAMTCDNVAGVCPGAKLIAIAVPCTAAYMNEASNSWVVTGQSDAPIDPYGYCG
Ga0335074_115482582	3300032895	Soil	HAASVAPPVDECALALTYLAAHAAPGFRFECPGYADGHQAMTCIDEPGICPGQKVIAIAVACPASWMNEASNSWVLMGLADRPIDPYGYCPAG
Ga0310914_101679791	3300033289	Soil	LSAYAAPGFTFQCPGYALGHQAMTCINQAGVCANEDLIAIADPCAVAYMNEASNSWVMTGASDAPIDPYGACAS

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.82
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.82
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084484

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign