Metagenome / Metatranscriptome Family F084475

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084475
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	80 residues
Representative Sequence	MRKTKFTAALLTFSLLLVASAIAGNSNKGTLNVDETVTVGGKQLPAGKYQVEWAGAGPSVEVSISDGRETVAKVPAQILP
Number of Associated Samples	86
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	89.29 %
% of genes from short scaffolds (< 2000 bps)	85.71 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.571 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (48.214 % of family members)
Environment Ontology (ENVO)	Unclassified (46.429 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.107 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 16.67% β-sheet: 29.63% Coil/Unstructured: 53.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF07920	DUF1684	10.71
PF14542	Acetyltransf_CG	1.79
PF02245	Pur_DNA_glyco	1.79
PF06902	Fer4_19	0.89
PF01850	PIN	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG3358	Uncharacterized conserved protein, DUF1684 family	Function unknown [S]	10.71
COG2094	3-methyladenine DNA glycosylase Mpg	Replication, recombination and repair [L]	1.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.57 %
Unclassified	root	N/A	21.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.57 %
Unclassified	root	N/A	21.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.57 %
Unclassified	root	N/A	21.43 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	66.07 %
Unclassified	root	N/A	21.43 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.43 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.14 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.43 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.14 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.43 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.14 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	1.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.43 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2.68 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.43 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.79 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001162\|JGI12714J13572_1000377	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300001661\|JGI12053J15887_10372789	Not Available	688	Open in IMG/M
3300002907\|JGI25613J43889_10163266	Not Available	584	Open in IMG/M
3300002914\|JGI25617J43924_10132363	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	870	Open in IMG/M
3300002914\|JGI25617J43924_10134655	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	860	Open in IMG/M
3300002914\|JGI25617J43924_10137750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	848	Open in IMG/M
3300002914\|JGI25617J43924_10162833	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300002914\|JGI25617J43924_10328696	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300002914\|JGI25617J43924_10332928	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300005167\|Ga0066672_10893809	Not Available	551	Open in IMG/M
3300005178\|Ga0066688_10023742	All Organisms → cellular organisms → Bacteria	3295	Open in IMG/M
3300005179\|Ga0066684_10265081	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1132	Open in IMG/M
3300005179\|Ga0066684_10300604	All Organisms → cellular organisms → Bacteria → Acidobacteria	1066	Open in IMG/M
3300005186\|Ga0066676_10600010	All Organisms → cellular organisms → Bacteria → Acidobacteria	746	Open in IMG/M
3300005446\|Ga0066686_10881901	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	589	Open in IMG/M
3300005554\|Ga0066661_10123918	All Organisms → cellular organisms → Bacteria → Acidobacteria	1564	Open in IMG/M
3300005568\|Ga0066703_10418637	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	804	Open in IMG/M
3300005598\|Ga0066706_10667306	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	825	Open in IMG/M
3300005598\|Ga0066706_10668855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	824	Open in IMG/M
3300006031\|Ga0066651_10312490	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300006034\|Ga0066656_10386394	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	905	Open in IMG/M
3300006176\|Ga0070765_101625849	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300006755\|Ga0079222_12161532	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300006796\|Ga0066665_10609530	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300007255\|Ga0099791_10141674	All Organisms → cellular organisms → Bacteria → Acidobacteria	1121	Open in IMG/M
3300009012\|Ga0066710_101715653	All Organisms → cellular organisms → Bacteria → Acidobacteria	954	Open in IMG/M
3300009137\|Ga0066709_103280921	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300009143\|Ga0099792_11171212	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300010336\|Ga0134071_10030495	All Organisms → cellular organisms → Bacteria → Acidobacteria	2349	Open in IMG/M
3300011269\|Ga0137392_10102376	All Organisms → cellular organisms → Bacteria → Acidobacteria	2259	Open in IMG/M
3300011269\|Ga0137392_10474607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1039	Open in IMG/M
3300011270\|Ga0137391_10273177	All Organisms → cellular organisms → Bacteria → Acidobacteria	1461	Open in IMG/M
3300011271\|Ga0137393_10433591	All Organisms → cellular organisms → Bacteria → Acidobacteria	1126	Open in IMG/M
3300012096\|Ga0137389_10286701	All Organisms → cellular organisms → Bacteria → Acidobacteria	1391	Open in IMG/M
3300012096\|Ga0137389_11068958	All Organisms → cellular organisms → Bacteria → Acidobacteria	691	Open in IMG/M
3300012096\|Ga0137389_11600553	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300012189\|Ga0137388_10943641	All Organisms → cellular organisms → Bacteria → Acidobacteria	797	Open in IMG/M
3300012198\|Ga0137364_11215511	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300012202\|Ga0137363_11117422	All Organisms → cellular organisms → Bacteria → Acidobacteria	670	Open in IMG/M
3300012202\|Ga0137363_11243308	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300012203\|Ga0137399_11064456	All Organisms → cellular organisms → Bacteria → Acidobacteria	681	Open in IMG/M
3300012203\|Ga0137399_11167532	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300012205\|Ga0137362_11535190	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300012208\|Ga0137376_10401641	All Organisms → cellular organisms → Bacteria → Acidobacteria	1190	Open in IMG/M
3300012210\|Ga0137378_10169776	All Organisms → cellular organisms → Bacteria	2026	Open in IMG/M
3300012362\|Ga0137361_10063232	All Organisms → cellular organisms → Bacteria	3104	Open in IMG/M
3300012404\|Ga0134024_1231645	All Organisms → cellular organisms → Bacteria → Acidobacteria	777	Open in IMG/M
3300012406\|Ga0134053_1044339	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300012683\|Ga0137398_10048435	All Organisms → cellular organisms → Bacteria	2506	Open in IMG/M
3300012683\|Ga0137398_10164930	All Organisms → cellular organisms → Bacteria → Acidobacteria	1445	Open in IMG/M
3300012924\|Ga0137413_10340240	All Organisms → cellular organisms → Bacteria → Acidobacteria	1061	Open in IMG/M
3300012925\|Ga0137419_10420973	All Organisms → cellular organisms → Bacteria → Acidobacteria	1047	Open in IMG/M
3300012925\|Ga0137419_10961152	All Organisms → cellular organisms → Bacteria → Acidobacteria	706	Open in IMG/M
3300012927\|Ga0137416_12141655	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300012929\|Ga0137404_11344831	Not Available	659	Open in IMG/M
3300012929\|Ga0137404_11430006	Not Available	639	Open in IMG/M
3300012930\|Ga0137407_10840593	All Organisms → cellular organisms → Bacteria → Acidobacteria	867	Open in IMG/M
3300012930\|Ga0137407_11347450	Not Available	678	Open in IMG/M
3300012930\|Ga0137407_12356618	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300012944\|Ga0137410_11041401	All Organisms → cellular organisms → Bacteria → Acidobacteria	698	Open in IMG/M
3300012944\|Ga0137410_11164629	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300012944\|Ga0137410_11758388	Not Available	546	Open in IMG/M
3300012975\|Ga0134110_10072172	All Organisms → cellular organisms → Bacteria → Acidobacteria	1375	Open in IMG/M
3300014150\|Ga0134081_10151395	All Organisms → cellular organisms → Bacteria → Acidobacteria	762	Open in IMG/M
3300015053\|Ga0137405_1084270	All Organisms → cellular organisms → Bacteria	4086	Open in IMG/M
3300015054\|Ga0137420_1059651	All Organisms → cellular organisms → Bacteria → Acidobacteria	933	Open in IMG/M
3300015241\|Ga0137418_10176656	All Organisms → cellular organisms → Bacteria	1863	Open in IMG/M
3300015241\|Ga0137418_10705630	All Organisms → cellular organisms → Bacteria → Acidobacteria	772	Open in IMG/M
3300015264\|Ga0137403_10382400	All Organisms → cellular organisms → Bacteria → Acidobacteria	1290	Open in IMG/M
3300015358\|Ga0134089_10405681	All Organisms → cellular organisms → Bacteria → Acidobacteria	583	Open in IMG/M
3300018431\|Ga0066655_11245077	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300018431\|Ga0066655_11265688	Not Available	527	Open in IMG/M
3300018468\|Ga0066662_10330387	All Organisms → cellular organisms → Bacteria → Acidobacteria	1299	Open in IMG/M
3300020170\|Ga0179594_10046607	Not Available	1450	Open in IMG/M
3300020170\|Ga0179594_10297185	Not Available	611	Open in IMG/M
3300020199\|Ga0179592_10383034	Not Available	616	Open in IMG/M
3300020199\|Ga0179592_10435748	Not Available	568	Open in IMG/M
3300021088\|Ga0210404_10503131	Not Available	684	Open in IMG/M
3300021170\|Ga0210400_10402345	All Organisms → cellular organisms → Bacteria → Acidobacteria	1129	Open in IMG/M
3300024288\|Ga0179589_10362966	Not Available	659	Open in IMG/M
3300025922\|Ga0207646_11942731	Not Available	501	Open in IMG/M
3300026318\|Ga0209471_1204039	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300026320\|Ga0209131_1203780	All Organisms → cellular organisms → Bacteria → Acidobacteria	910	Open in IMG/M
3300026325\|Ga0209152_10500788	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300026328\|Ga0209802_1077319	All Organisms → cellular organisms → Bacteria → Acidobacteria	1555	Open in IMG/M
3300026328\|Ga0209802_1142843	All Organisms → cellular organisms → Bacteria → Acidobacteria	1022	Open in IMG/M
3300026330\|Ga0209473_1082524	All Organisms → cellular organisms → Bacteria → Acidobacteria	1355	Open in IMG/M
3300026529\|Ga0209806_1316177	Not Available	524	Open in IMG/M
3300026542\|Ga0209805_1047988	All Organisms → cellular organisms → Bacteria → Acidobacteria	2137	Open in IMG/M
3300026548\|Ga0209161_10281803	All Organisms → cellular organisms → Bacteria → Acidobacteria	830	Open in IMG/M
3300026551\|Ga0209648_10560967	All Organisms → cellular organisms → Bacteria → Acidobacteria	636	Open in IMG/M
3300026555\|Ga0179593_1227026	All Organisms → cellular organisms → Bacteria → Acidobacteria	1987	Open in IMG/M
3300026557\|Ga0179587_10651653	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300027297\|Ga0208241_1036112	All Organisms → cellular organisms → Bacteria → Acidobacteria	769	Open in IMG/M
3300027643\|Ga0209076_1078135	All Organisms → cellular organisms → Bacteria → Acidobacteria	941	Open in IMG/M
3300027663\|Ga0208990_1087499	All Organisms → cellular organisms → Bacteria → Acidobacteria	879	Open in IMG/M
3300027862\|Ga0209701_10195952	All Organisms → cellular organisms → Bacteria → Acidobacteria	1207	Open in IMG/M
3300027903\|Ga0209488_10680317	All Organisms → cellular organisms → Bacteria → Acidobacteria	739	Open in IMG/M
3300028536\|Ga0137415_11362108	Not Available	530	Open in IMG/M
3300031231\|Ga0170824_123209106	All Organisms → cellular organisms → Bacteria → Acidobacteria	1288	Open in IMG/M
3300031754\|Ga0307475_10606183	All Organisms → cellular organisms → Bacteria → Acidobacteria	876	Open in IMG/M
3300031823\|Ga0307478_10032233	All Organisms → cellular organisms → Bacteria → Proteobacteria	3785	Open in IMG/M
3300031962\|Ga0307479_12104941	All Organisms → cellular organisms → Bacteria → Acidobacteria	512	Open in IMG/M
3300032180\|Ga0307471_103094795	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300032205\|Ga0307472_100462422	All Organisms → cellular organisms → Bacteria → Acidobacteria	1082	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	94.64%
Loam	Environmental → Terrestrial → Soil → Loam	5.36%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	53.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	32.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	48.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	19.64%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	12.50%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001162	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012404	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12714J13572_10003775	3300001162	Forest Soil	MRKMQFTAGLLMFSLLLAASAIAGNTNKGTLNVGETVTVGGKQLPAGRYQVEWAGTGSNVEVSISDGRDTVAKVPAQVLPLKKAEAESGYSTN
JGI12053J15887_103727891	3300001661	Forest Soil	MKNTKFGAGMLAFSLLLATSALAGNSNKGTLNVGETVTVGDKQLXAGKYHVEWAGSGPSVELSISGDRGTVAKVPA
JGI25613J43889_101632661	3300002907	Grasslands Soil	MRKTKFTAGLLTFSLLLAAGAIAGNSNRGTLNVAESVTVGGKQLPAGKYQVEWAGTGENVEVSISNGKDTVAKVPAQVVPVAKAERESGYSTNTDQA
JGI25617J43924_101323632	3300002914	Grasslands Soil	MRKTKFAAGLLAFSLLLAATAIAGNSNKGTLNVAETVTVGGKQLPAGKYQVEWTGSGSDAEVSISNGRDTVAK
JGI25617J43924_101346552	3300002914	Grasslands Soil	MKKTKFTAALLTFSLLLVASAIAGNSNKGTLNVDEAVTVAGKQLPAGKYQVEWAGTGPSVELSISDGRETVAKVPAQILPLAKAEAGSGYSTDTDQ
JGI25617J43924_101377502	3300002914	Grasslands Soil	MKNAKFGAGLLAFSLLLATGAIAGNSTKGMXNVGEAVTVGGKQLPAGKYQVEWAGTGPTVELSISDSRGTIAKVP
JGI25617J43924_101628331	3300002914	Grasslands Soil	MRKTKFTAALLTLSLLLVASAIAGNSNKGTLNVDETVTVGGKQLPAGKYQVEWVGTGPSVELNISDGRETVAKVPAQILPLAKAEAGSGYSTDTDQ
JGI25617J43924_103286962	3300002914	Grasslands Soil	MRKTKFTAGLLTFSLLLAASAIAGNSNKGTLNVDETITVGGKQLPAGKYQVEWAGNGPTVELSISGDRGPVAKVPAQVLPLKKAEAESGYSTNTD
JGI25617J43924_103329282	3300002914	Grasslands Soil	MRKTKFTAGLLTFSLLLAASAIAGNSNKGTLNVDETITVGGKQLPAGKYQVEWAGNGPSVEVSISGDRGT
Ga0066672_108938092	3300005167	Soil	MKNTKFGAALLAFSLLLAANAIAGNSNKGTLNVGETVIVGGKPLPAGKYQVAWAGNGPTAELSISDVRERVAKVPAQILPLKKAEA
Ga0066679_110089951	3300005176	Soil	MRKTKFTAGLLTFSLLLAAHAIAGNSNKGTLHVDETVTVAGKQLPAGEYQVQWAGSGS
Ga0066688_100237425	3300005178	Soil	MRKTKLTAGLLAFSLLLAAGAIAGNSNRGTLKIDETVTIAGKQLPAGQYQVEWSGSGPSVEVSISNGRDTVAKVPAQLVPLKKAEPAGGYSTSTDQAGNKALTGIL
Ga0066684_102650812	3300005179	Soil	MRKRRLTAGLLAFSLLLAAGAIAGSSNKGTLKVDDTVTVAGKQLPAGTYQVEWTGSGSSVEVSISGSKGAVVNVPARLLQLKKAGAENGYSTNT
Ga0066684_103006041	3300005179	Soil	MRKTKFTAGLLTFSLLLAAHAIAGNSNKGTLHVDETVTVAGKQLPAGEYQVQWAGSGSNVEVSISDGK
Ga0066676_106000102	3300005186	Soil	MRKTKFTAGLLTFSLLLAAHAIAGNSNKGTLHVDETVTVAGKQLPAGEYQVQWAGSGSNVEVSISDGKDTVAKVPAQVLPLK
Ga0066686_108819011	3300005446	Soil	MTRTKSIANLLTISLLLAANAVAGNTNKGTLKVAETVSVGGKQLTAGQYQVEWAGSGSNVELTISGARGTVAKVPAQILPLEK
Ga0066661_101239182	3300005554	Soil	MKNTKFGAGLLAFSLLLAASAIAGNSNKGTLNVGETVTVAGKQLPAGRYQVEWAGNGSNVELSISDGRTTVAKLPAQFIPLKKAEA
Ga0066703_104186371	3300005568	Soil	MTRTKSIANLLTISLLLAANAVAGNTNKGTLKVAETVSVGGKQLTAGQYQVEWAGSGSNVELTISGARGTVAKVPAQ
Ga0066706_106673062	3300005598	Soil	MRKTKLTAGLLAFSLLLAVGAIAGNSNRGTLKVDETVTVAGKQLPAGQYQVEWSGSGPSVEVSISNGRDTVAKVPAQLVPLKKA
Ga0066706_106688552	3300005598	Soil	MRKTKLTAGLLAFSLLLAAGAIAGNSNRGTLKIDETVTVAGKQLPAGQYQVEWSGSGPSVEVSISNGRDTVAKVPAQLVPLKKA
Ga0066651_103124901	3300006031	Soil	MRKTRLTAGLLAFSLLLAAGAIAGSSNKGTLKVDDTVTVAGKQLPAGTYQVEWTGSGSSVEVSI
Ga0066656_103863942	3300006034	Soil	MSKTKFSAGLMAFSLLLAASALAGNSNKGTLNVGETVTIAGKQLPAGQYQVEWTGNGPTVELTISGYRGTVAKV
Ga0070765_1016258491	3300006176	Soil	MRKMQFTAGLLTFSLLLAASAIAGNTNKGTLKVEETVTVGGKQLPAGRYQVEWAGTGSNVELSISDGRD
Ga0079222_121615321	3300006755	Agricultural Soil	MRKTKLTAGLLTFSLLLAAGAIAGNSNKGTLKVGETITVAGKQLPAGEYQVEWTGSGPTVEVSISNGRDTVAKVPAQLVLLKKAE
Ga0066665_106095301	3300006796	Soil	MRKTKLTAGLLAFSLLLAAGAIAGNSNRGTLKIDETVTVAGKQLPAGQYQVEWSGSGPSVEVSISNGRDTVAKVPAQLVPLKKAEPAGGYSTSTDQAGNKALTGIL
Ga0099791_101416742	3300007255	Vadose Zone Soil	MTRTKSITNLLTLSLLLAASAVAGNTNKGTLKVAETVSVGGKQLRAGQYQVEWAGSGPDVELTISDGRETVAKVPAQILPLTKAEA
Ga0066710_1017156531	3300009012	Grasslands Soil	MRKTKLTAGLLAFSLLLAAGAIAGNSNRGTLKIDETVTVAGKQLPAGQYQVEWSGSGPSVEVSISNGRDTVAKVPAQLVPLKKAE
Ga0066709_1032809211	3300009137	Grasslands Soil	MRKTKLTAGLLAFSLLLAVGAIAGNSNRGTLKVDETVTVAGKQLPAGQYQVEWSGSGPSVEVSISNGRDTVAKVPAQL
Ga0099792_111712121	3300009143	Vadose Zone Soil	MRKTKFTAGLLTFSLLLAASAIAGNTTKGTLNVDETVTVGGKQLPAGRYQVEWTGNGPTV
Ga0134071_100304954	3300010336	Grasslands Soil	MRKTRLTAGLLAFSLLLAAGAIAGSSNKGTLKVDDTVTVAGKQLPAGTYQVEWTGSGSSVEVSISGSKGAVVNVPARLLQL
Ga0137392_101023761	3300011269	Vadose Zone Soil	MQFTAGLLTFSLVLAAGAIAGNTNKGTLKVDETVTVGGKQLPAGRYQVEWTGSGSNVELS
Ga0137392_104395702	3300011269	Vadose Zone Soil	MRKTKFAAGLLAFSLLLAASAIAGNSNKGTLNVAETVTVGGKQLPAGKYQVEWTGSGSDA
Ga0137392_104746073	3300011269	Vadose Zone Soil	MRKTKFTAGLLTFSLLLAASAIAGNTTKGTLNVDETVTVGGKQLPAGRYQVEWTGNGPTVELTISSGRDTVAKVPAQILPVKT
Ga0137391_102731771	3300011270	Vadose Zone Soil	MKKTKFGAGLLAFSLLLAASAIAGNSNKGTLQVDETVTVGGKQLPAGKYQVEWTGNGPTVELSISNGRDTVAKVPAQVLPVKIAQ
Ga0137393_104335912	3300011271	Vadose Zone Soil	MRKTKFTAGLLTLSLLLAASAIAGNPNKGTLQVSETVTVGGKQLPAGKYQVEWAGSGSSVELSISDGRETVAKVPAQILPLKKAEA
Ga0137389_102867012	3300012096	Vadose Zone Soil	MRKTKFTAGLLTFSLLFAASAIAGNTNKGTLQLTDTVTVGGKQLPAGKYRVEWAGSGPSVELSISDGRET
Ga0137389_110689581	3300012096	Vadose Zone Soil	MRKTKITASLLPFSLLLAASAIAGNTNRGTLQVAETVTVAGKQLPAGKYQVEWTGNGPTVELSISNGRDTVAKV
Ga0137389_116005532	3300012096	Vadose Zone Soil	MRKTKFTAALLTFSLLLVASAIAGNSNKGTLNVDETVTVGGKQLPAGKYQVEWAGAGPSVEVSISDGRETVAKVPAQILP
Ga0137388_109436411	3300012189	Vadose Zone Soil	MRKTKFTAGLLTISLLLAASAFAGNTNKGTLQLTDTVTVGGKQLPAGKYRVEWAGSGATVEVSVSDGRETLAKVPAQVLPLEKAETTS
Ga0137364_112155112	3300012198	Vadose Zone Soil	MRKTKLTAGLLFSLLLAAGAIAGNSNRGTLKVDETVTVAGKQLPAGQYQVEWSGSGP
Ga0137363_111174221	3300012202	Vadose Zone Soil	MRKTKFTAGLLTFSLLLAASAIAGNTNKGTLQVAETVTVGGKQLPAGKYQVEWAGSGSNVELSIFDGKETVAKV
Ga0137363_112433081	3300012202	Vadose Zone Soil	MRKTKLTAGLLTFSLLLAASAVAGNSNRGTLKVDETITVAGKQLPAGEYQVEWTGSGPT
Ga0137399_110644562	3300012203	Vadose Zone Soil	MRKTKFTAALLTFSLLLVASAIAGNSNKGTLNVDETVTVGGKPLPAGKYQVEWAGTGPSVEVSISDGRETVAKVPARILPLTKAEAGSGYSTDTDQAGNKALTGIFFR
Ga0137399_111675322	3300012203	Vadose Zone Soil	MKNAKFGAGLLAFSLLLATGAIAGNSTKGTLNVGEAVTVGGKPLPAGKYQVEWAGTGSNVEL
Ga0137362_115351902	3300012205	Vadose Zone Soil	MKKTKFGAGLLAFSLLLAASAIAGNSNKGTLQVDETVTVGGKQLPAGKYQVEWTGNGPTVELSISNGRDTVAKVPAQVLPVKIAQAGS
Ga0137380_103354503	3300012206	Vadose Zone Soil	MRKTKFTTALLSFSLLLAANAIAGNSNKGTLHVDETVTVGGKQLSAGKYQVQWVGSGSNV
Ga0137376_104016411	3300012208	Vadose Zone Soil	MKNTKFGAGLLAFSLLLAASAIAGNSNKATLNVGETVTVGGKPLPAGKYQVEWAGNGPTVELSISDGR
Ga0137378_101697761	3300012210	Vadose Zone Soil	MKNTKFGAGLLAFSLLLAASAVAGNSNKGTLNVGETVTVGGKPLPAGKYQVEWAGNGPTVELSISDGRETVAKVPAQILPLKKAEAGSGYS
Ga0137385_105579073	3300012359	Vadose Zone Soil	MRKTKFTTALLSFSLLLAANAIAGNSNKGTLHVDETVTVGGKQLSAGKYQVQWVGSG
Ga0137361_100632321	3300012362	Vadose Zone Soil	MKKTKFGAGLLAFSLLLAASAIAGSSNKGTLQVDETVTVGGKQLPAGKYQVEWTGNGPTVELSISNGRDTVAKVPAQVLPVKIAQAGS
Ga0134024_12316452	3300012404	Grasslands Soil	MKNTKFGAALLAFSLLLAANAIAGNSNKGTLNVGETVVVGGKPLPAGKYQVAWAGNGPTAELSISDVRERVAKVRRKFFR*
Ga0134053_10443392	3300012406	Grasslands Soil	MTRTKSIANLLTLSLLLAASAVAGNTNKGTLKVAETVSVGGKQLRAGQYQVEWAGSGPDVELTIPTAGRR*
Ga0137398_100484354	3300012683	Vadose Zone Soil	MRKTKLTAGLLTFSLLLAASTIAGNSNKGTLKVDETITVGGKQLPAGTYQVEWTGSGPS
Ga0137398_101649302	3300012683	Vadose Zone Soil	MRKTKFTAALLTFSLLLVASAIAGNSNKGTLNVEETVSVGGKQLPAGKYQVEWAGTGPSVEVSISDGRETVANVPAQLIPLKKAEPTSGYSTNTDQAGNKVLTG
Ga0137413_103402401	3300012924	Vadose Zone Soil	MRKTKFTAALLTFSLFLAASAIAGNSNKGTLNVDETVTVGGKQLPAGKYQVEWAGTGPSVEVSISDGRETVAKVSAQ
Ga0137419_104209731	3300012925	Vadose Zone Soil	MRKTKFTATLLTFSLLLAANAIAGNSNKGTLHVDETVTVGGQQLPAGKYQVQWAGSGSNVEVSIS
Ga0137419_109611521	3300012925	Vadose Zone Soil	MRKTKLTAGLLTLSLLLAASAIAGNPNKGTLQVSETVTVGGKRLPAGKYQVEWAGSGSSVELSISDGRQTVAKVPAQILPLKKAEA
Ga0137416_121416551	3300012927	Vadose Zone Soil	MRKTKLTPGLLTFSLLLATGTIAGNTNKGTLQVDETVTVGGKPLPAGRYQVEWTGTGPAVEL
Ga0137404_113448312	3300012929	Vadose Zone Soil	MTKTKSIASLLTLSLLLAASAIAGNTNKGTLKVAETVSVGGKQLTAGQYQVEWAGSGPDIELTISDGR
Ga0137404_114300061	3300012929	Vadose Zone Soil	MTRTKSILSLLTLSLLLAASAVAGNTNKATLKVSETVSVGGKQLTAGQYRVEWAGNGPDVELTISDGKETVAKVPAQIL
Ga0137407_108405932	3300012930	Vadose Zone Soil	MRKTRFTAGLLTFSLLLAASAIAGNTNKATLKVSETVSVGGKQLRAGTYRVEWAGSGSNVELSIIDGRETVAKVPAQILPLEKAEAAS
Ga0137407_113474501	3300012930	Vadose Zone Soil	MTRTKSIANLLTLSLLLAASAVAGNTNKGTLKVAETVSVGGKQLTAGQYRVEWAGNGPDVELTISDGRETVAKVPAQNLPLTKAEAGNGYSINTDEAG
Ga0137407_123566181	3300012930	Vadose Zone Soil	MRKTKFTAGLLTFSLLLAASAIAGNPNKGTLQVSETVTVGGKQLPAGKYQVEWAGSGSSVELSISDGRETVAKVPAQILSLKKAEVASGYTTSTDQAGNKALTEIF
Ga0137410_110414012	3300012944	Vadose Zone Soil	MRKMKFGAGLLAFSLLLAASAMAGNSNKGTLNVEETVTVAGKQLPAGKYQVEWAGNGPTVELSISGD
Ga0137410_111646291	3300012944	Vadose Zone Soil	MRKTRFTAGLLTFSLLLAASAIAGNPNKGTLQVAETVTVGGKQLRAGTYRVEWAGSGSNVELSIIDGRETVAKVPAQILPLEKAEAAS
Ga0137410_117583881	3300012944	Vadose Zone Soil	MKKLKLAATLLTFSLVLATGAIAGTSSKGTLNVGETVIVGGKQLRAGKYQVAWTGSGSDVELSISDGRETVAKVPAQILPLKKAEPQSGYSTSADQSGNK
Ga0134110_100721722	3300012975	Grasslands Soil	MRKTKFTAGLLTFSLLLAAHAIAGNSNKGTLHVDETVTVAGKQLPAGEYQVQWAGSGSNVEVSISDGKDTVAKVPAQVLPLKKA
Ga0134081_101513952	3300014150	Grasslands Soil	MKNTKFGAALLAFSLLLAANAIAGNSNKGTLNVGETVIVGGKPLPAGKYQVAWAGNGPTAELSISDVRERVAKVRRKFFR*
Ga0137405_10842706	3300015053	Vadose Zone Soil	MRKTKFTAGLLTFSLLLAAGAIAGNSNRGTLNVAESVTVGGKQLPAGKYQVEWAGTGENVEVSISNGK
Ga0137420_10596511	3300015054	Vadose Zone Soil	MRKTKFTAALLTFSLLLVASAIAGNSNKGTLNVEETVSVGGKQLPAGKYQVEWAGTGPSVEVSISDGRETVANVPR*
Ga0137418_101766561	3300015241	Vadose Zone Soil	MRKTKLTAGLLTLSLLLAASAIAGNPNKGTLQVSETVTVGGKRLPAGKYQVEWAGSGSSVELSISDGRQTVAKVPAQILPLKKAEAASGYS
Ga0137418_107056301	3300015241	Vadose Zone Soil	MRKTKRTAGLLTFSMLLAAGAIAGNPNKGTLKVDETITVGGKQLPAGKYHVEWAGDGPSVEVSISGDTGTVVKVPAQLRPLKKAEPA
Ga0137403_103824002	3300015264	Vadose Zone Soil	MKKLKLAATLLTFSLVLVTGAIAGTSSKGTLNVGETVIVGGKQLPAGKYQVAWTGSGSDVELSISDGRETVAKVPAQILLLKKAEF*
Ga0134089_104056812	3300015358	Grasslands Soil	MRKTKLTARLLAFSLLLAAGAIAGNSNRGTLKIDETVTVAGKQLPAGQYQVEWAGSGSNVELTISGARGTVAKVPAQILPLEKA
Ga0066655_112450772	3300018431	Grasslands Soil	MSKTKFSAGLMAFSLLLAASALAGNSNKGTLNVGETVTIAGKQLPAGQYQVEWTGNGPTVELTISGYRGTVAKVPAQIIPLKKAGAASGYSTIADQAG
Ga0066655_112656881	3300018431	Grasslands Soil	MTRTKSIANLLTLSLLLAASAVAGNTNKGTLKVAETVSVGGKQLRAGQYQVEWAGSGPDVELTISDGRETVAKVPAQILPLTKAEANSGY
Ga0066662_103303871	3300018468	Grasslands Soil	MRKTKLTAGLLTFSLLLAASAIAGNSNKGTLNTDETITVGSKQLPAGKYQVEWAGSGPTVEVSISGDRGTVAKVPAQ
Ga0179594_100466072	3300020170	Vadose Zone Soil	MTRTKSIANLLTISLLLAANAVAGNTNKGTLKVAETVSVGGKQLTAGQYQVEWAGSGSNVELTISGARGTVAKVPAQILPLEKAGAASGY
Ga0179594_102971851	3300020170	Vadose Zone Soil	MRKTKFTAGLLTFSLLLAAGAIAGNSNRGTLNVAESVTVGGKQLPAGKYQVEWAGTGENVEVSISNGKDTVAKVP
Ga0179592_103830341	3300020199	Vadose Zone Soil	MTRTKSIANLLTLSLLLAASAVAGNTNKGTLKVAETVSVGGKQLTAGQYRVEWAGNGPDVELTISDGRETVAKVPAQILPLTKAEANSGYSINTDQAG
Ga0179592_104357481	3300020199	Vadose Zone Soil	MRKAKLTAGLVTFSLLLASGAIAGNTNKGTLNVAETVTVGGKQLPAGKYQVEWTGTGPAVEVS
Ga0210404_105031311	3300021088	Soil	MRNTKFTAGFLTLSLLLAASAVAGNANKGTLNIGQTVTVGGKQLAAGKYQLEWAGSGSNVELTISDAKETIAKVPAQI
Ga0210400_104023451	3300021170	Soil	MRNTKFTAGFLTLSLLLAASAVAGNANKGTLNIGQTVTVGGKQLAAGKYQLEWAGSGSNVELTISDGKETIAKVPAQIVPLQKAEASSGYGTSTDP
Ga0179589_103629661	3300024288	Vadose Zone Soil	MKNTKFGAGLMAFSLLLAASAIAGNSNKGTLNVGETVTVGGKPLPAGKYQVEWAGNGPTVELSISDSRETLAKVPAQILPLKKAEAGSGYSTNTDQA
Ga0137417_11260541	3300024330	Vadose Zone Soil	MRKMKFGASLLAFSLLLAASAMAGNSNKGTLNVGETVTVAGKQLRAGTYQVEWAGNGPTVEL
Ga0137417_12120163	3300024330	Vadose Zone Soil	MRKMKFGASLLAFSLLLAASAMAGNSNKGTLNVGETVTVAGKQLRAGTYQVEWAGNGPTV
Ga0207646_119427311	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTRTKSIATLLTLSLLLAASAVAGNTNKGTLKVAETVSVGGKQLTAGQYQVEWAGSGSNVELTISGVR
Ga0209471_12040392	3300026318	Soil	MRKTRLTAGLLAFSLLLAAGAIAGSSNKGTLKVDDTVTVAGKQLPAGTYQVEWTGSGSSVEVSISGSKGAVVNVPARLLQLKKAGAEN
Ga0209131_12037802	3300026320	Grasslands Soil	MRKTKFTAGLLTFSLLLAAGAIAGNSNRGTLNVAESVTVGGKQLPAGKYQVEWAGTGENVEVSISNGKDTVAKVPAQVVPVAKAERESGYSTNTDQAGNKSLTGIF
Ga0209152_105007881	3300026325	Soil	MKNTKFGAGLLAFSLLLAASAIAGNSNKGTLNVGETVTVGGKPLPAGKYQVEWAGNGPTVELSISDGRETVAKVPAQILPLKKAEAGSGYSTNTDQAGNK
Ga0209802_10773192	3300026328	Soil	MRKTKLTAGLLAFSLLLAAGAIAGNSNRGTLKIDETVTVAGKQLPAGQYQVEWSGSGPSVEVSISNGRDTVAKVPA
Ga0209802_11428431	3300026328	Soil	MRKTKFTAGLLTFSLLLAAGAIAGNSNRGTLNVAESVTVGGKQLPAGKYQVEWAGTGENVEVSISNGKDTVAKVPAQ
Ga0209473_10825241	3300026330	Soil	MRKTRLTAGLLAFSLLLAAGAIAGSSNKGTLKVDDTVTVAGKQLPAGTYQVEWTGSGSSVEVSISGSKGAVVNVPARLLQLKKAGAENGYSTNT
Ga0209806_13161772	3300026529	Soil	MTRTKSIANLLTISLLLAANAVAGNTNKGTLKVAETVSVGGKQLTAGQYQVEWAGSGSNVELTISGARGTVAKVPAQIL
Ga0209805_10479881	3300026542	Soil	MRKTKFTAGLLTFSLLLAAHAIAGNSNKGTLHVDETVTVAGKQLPAGEYQVQWAGSGSNVEVSISDGKDTVAKVPAQVLP
Ga0209161_102818032	3300026548	Soil	MRKTKLTAGLLAFSLLLAVGAIAGNSNRGTLKVDETVTVAGKQLPAGQYQVEWSGSGPSVEVSISNGRDTVAKVPAQLVPLKK
Ga0209648_105609671	3300026551	Grasslands Soil	MRKTKLTAGLLTFSLLLAASAVAGNSNRGTLKVGETITVAGKQLPAGEYQVEWTGSGPTVEVSISGYKGSIAKVPAQLLPLNKAEAGNGYSTSTDPAGNKALTG
Ga0179593_12270263	3300026555	Vadose Zone Soil	MRNTKFAAGLLTLSLLLAGGAIAGNSNRGSLQLDETITVGGKQVPAGKYEVEWAGTGSDVELTISKGRDTVAK
Ga0179587_106516531	3300026557	Vadose Zone Soil	MRKAKLTAGLVTFSLLLASGAIAGNTNKGTLNVAETVTVGGKQLPAGKYQVEWTGTGPAVEVSISNGK
Ga0208241_10361121	3300027297	Forest Soil	MRKTKITASLLTFSLLLAASAFAGPNKGTLRVAETVTVGGKQLPAGEYQLEWAGTGPSVELSISNGRETVAKVTAQLLP
Ga0209076_10781352	3300027643	Vadose Zone Soil	MTRTKSIANLLTISLLLAANAVAGNTNKGTLKVAETVSVGGKQLTAGQYQVEWAGSGSNVELTISGARGTVAKVPAQILPLEKAGAASG
Ga0208990_10874991	3300027663	Forest Soil	MTRTKSIANLLTLSLLLAASVVAGNTNKGTLKVAETVSVGGKQLTAGEYQVEWAGSGSSVELTISEGRETVAK
Ga0209701_101959521	3300027862	Vadose Zone Soil	MRKTKFTAALLTFSLLLAAGAIAGNSNKGTLNVTETVTVGGKQLPAGKYQVEWAGSGSDVEVSISNGKDTIARVPAQVLPLKKAEAGSGYSTNTDQAGNK
Ga0209488_106803171	3300027903	Vadose Zone Soil	MRKTKFTAGLLTFSLLLAAGAIAGNSNRGTLNVAESVTVGGKQLPAGKYQVEWAGTGENVEVSISNGKDTVAKVPAQVVPVAKAERESGYSTNTDQ
Ga0137415_113621081	3300028536	Vadose Zone Soil	MRKTKFTAALLTFSLLLVASAIAGNSNKGTLNVDETVTVGGKPLPAGKYQLEWVGTGPSVEVSISDGRET
Ga0170824_1232091061	3300031231	Forest Soil	MRNTKFAAGLLTLSLLLAGGAVAGNSNRGSLQLDETITVGGKQLPAGKYEVEWAGTGSD
Ga0307469_125302661	3300031720	Hardwood Forest Soil	MRKMKFAAGLLASSLLLAASAIAGNSNKGTLTVADTITVGGKQLPAGKYQVEWAGTGSD
Ga0307475_106061832	3300031754	Hardwood Forest Soil	MRKMKFAAGLLASSLLLAASAIAGNSNKGTLTVADTITVGGKQLPAGKYQVEWTGTGSDVELSISNGRDT
Ga0307478_100322338	3300031823	Hardwood Forest Soil	MSKIKFSASLLAFSLLLAGGAIAGNTNRGTLKFDEPVTVGGKQLPVGKYELEWAGTGPEVELSIS
Ga0307479_121049411	3300031962	Hardwood Forest Soil	MRKTKLTAGLLTFSLLLAVGAIAGNTNKGTLQVDETVTVGGKPLPAGRYQVEWTGTGPAVELSISSGRDTVAKLPAQILPMKKAYAQSGYSTNTDQAGNKA
Ga0307471_1030947952	3300032180	Hardwood Forest Soil	MRKTKFTAGLLTFSLLLAASAIAGNTNKGTLQLTDTVTVGGKQLPAGKYRVEWAGSGSTVEVSISDGRETLAKVSAQIL
Ga0307472_1004624221	3300032205	Hardwood Forest Soil	MRKTRFTAGLLTFSLLLAAGAIAGNSNRGTLNVAEAVTVGGKQLPAGKYQVEWAGSGENVEVSIS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084475

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences