Metagenome / Metatranscriptome Family F084466

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084466
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	107 residues
Representative Sequence	MRAIPTALFALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRG
Number of Associated Samples	106
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	38.74 %
% of genes near scaffold ends (potentially truncated)	96.43 %
% of genes from short scaffolds (< 2000 bps)	96.43 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.750 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.071 % of family members)
Environment Ontology (ENVO)	Unclassified (36.607 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.214 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 25.74% β-sheet: 0.00% Coil/Unstructured: 74.26%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00006	ATP-synt_ab	32.14
PF03653	UPF0093	1.79
PF03401	TctC	0.89
PF07497	Rho_RNA_bind	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1981	Protoporphyrinogen oxidase HemJ (unrelated to HemG or HemY)	Coenzyme transport and metabolism [H]	1.79
COG1158	Transcription termination factor Rho	Transcription [K]	0.89
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.64 %
Unclassified	root	N/A	5.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.64 %
Unclassified	root	N/A	5.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.75 %
Unclassified	root	N/A	5.36 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.89 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	91.07 %
Unclassified	root	N/A	5.36 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.79 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.89 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	38.39 %
Unclassified	root	N/A	5.36 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4.46 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.79 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.89 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	29.46 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	3.57 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.79 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	3.57 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.79 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.79 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	3.57 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.79 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.79 %
Methylorubrum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum	0.89 %
Deuterostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %
Chordata	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Craniata	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Vertebrata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Gnathostomata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Chondrichthyes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Elasmobranchii	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Selachii	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Galeomorphii	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Galeoidea	superorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Orectolobiformes	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Hemiscylliidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Chiloscyllium	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Name	Rank	Taxonomy	Distribution
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.93 %
Unclassified	root	N/A	5.36 %
Pseudomonas parafulva	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	3.57 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.79 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.79 %
Chiloscyllium punctatum	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium → Chiloscyllium punctatum	0.89 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309009\|GPKNP_GG3DY5402F6KLX	All Organisms → cellular organisms → Bacteria → Proteobacteria	506	Open in IMG/M
3300000891\|JGI10214J12806_12993700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	565	Open in IMG/M
3300000956\|JGI10216J12902_111114876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	633	Open in IMG/M
3300000956\|JGI10216J12902_122003377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	676	Open in IMG/M
3300004643\|Ga0062591_101757962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	631	Open in IMG/M
3300004779\|Ga0062380_10352015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	632	Open in IMG/M
3300004808\|Ga0062381_10402275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	525	Open in IMG/M
3300005093\|Ga0062594_102889490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	535	Open in IMG/M
3300005167\|Ga0066672_11009013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	508	Open in IMG/M
3300005186\|Ga0066676_10653107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	715	Open in IMG/M
3300005329\|Ga0070683_101685083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	610	Open in IMG/M
3300005364\|Ga0070673_100137700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2057	Open in IMG/M
3300005436\|Ga0070713_101450840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	666	Open in IMG/M
3300005438\|Ga0070701_11129478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	553	Open in IMG/M
3300005440\|Ga0070705_101620974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	545	Open in IMG/M
3300005530\|Ga0070679_100736454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	929	Open in IMG/M
3300005535\|Ga0070684_101517161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	632	Open in IMG/M
3300005545\|Ga0070695_101364708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	587	Open in IMG/M
3300005560\|Ga0066670_10832658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	560	Open in IMG/M
3300005564\|Ga0070664_100467181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1160	Open in IMG/M
3300005841\|Ga0068863_101072374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	810	Open in IMG/M
3300005844\|Ga0068862_101395201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	704	Open in IMG/M
3300006038\|Ga0075365_10433140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	928	Open in IMG/M
3300006046\|Ga0066652_101523421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	619	Open in IMG/M
3300006048\|Ga0075363_100559527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	683	Open in IMG/M
3300006050\|Ga0075028_100685144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	616	Open in IMG/M
3300006177\|Ga0075362_10463678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	645	Open in IMG/M
3300006177\|Ga0075362_10742621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	514	Open in IMG/M
3300006178\|Ga0075367_10930271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	555	Open in IMG/M
3300006178\|Ga0075367_10969363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	543	Open in IMG/M
3300006755\|Ga0079222_11984066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	571	Open in IMG/M
3300006794\|Ga0066658_10775136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	538	Open in IMG/M
3300006904\|Ga0075424_101780259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	652	Open in IMG/M
3300009098\|Ga0105245_11166690	All Organisms → cellular organisms → Bacteria → Proteobacteria	818	Open in IMG/M
3300009101\|Ga0105247_11362509	All Organisms → cellular organisms → Bacteria → Proteobacteria	572	Open in IMG/M
3300009233\|Ga0103856_10083778	All Organisms → cellular organisms → Bacteria → Proteobacteria	594	Open in IMG/M
3300009261\|Ga0103870_1044886	All Organisms → cellular organisms → Bacteria → Proteobacteria	580	Open in IMG/M
3300009551\|Ga0105238_12703494	All Organisms → cellular organisms → Bacteria → Proteobacteria	533	Open in IMG/M
3300009553\|Ga0105249_12119726	All Organisms → cellular organisms → Bacteria → Proteobacteria	635	Open in IMG/M
3300009651\|Ga0105859_1223023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	563	Open in IMG/M
3300009661\|Ga0105858_1130802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	696	Open in IMG/M
3300010038\|Ga0126315_11178919	All Organisms → cellular organisms → Bacteria → Proteobacteria	520	Open in IMG/M
3300010159\|Ga0099796_10109703	Not Available	1049	Open in IMG/M
3300010166\|Ga0126306_11511000	All Organisms → cellular organisms → Bacteria → Proteobacteria	558	Open in IMG/M
3300010375\|Ga0105239_12024937	All Organisms → cellular organisms → Bacteria → Proteobacteria	669	Open in IMG/M
3300010397\|Ga0134124_12789868	All Organisms → cellular organisms → Bacteria → Proteobacteria	532	Open in IMG/M
3300010400\|Ga0134122_10489393	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium → Chiloscyllium punctatum	1110	Open in IMG/M
3300012210\|Ga0137378_11190314	All Organisms → cellular organisms → Bacteria → Proteobacteria	678	Open in IMG/M
3300012212\|Ga0150985_110246367	All Organisms → cellular organisms → Bacteria → Proteobacteria	633	Open in IMG/M
3300012362\|Ga0137361_11100697	All Organisms → cellular organisms → Bacteria → Proteobacteria	715	Open in IMG/M
3300012469\|Ga0150984_111735631	All Organisms → cellular organisms → Bacteria → Proteobacteria	501	Open in IMG/M
3300012896\|Ga0157303_10277202	All Organisms → cellular organisms → Bacteria → Proteobacteria	524	Open in IMG/M
3300012898\|Ga0157293_10064385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	856	Open in IMG/M
3300012901\|Ga0157288_10147464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	698	Open in IMG/M
3300012904\|Ga0157282_10236993	All Organisms → cellular organisms → Bacteria → Proteobacteria	610	Open in IMG/M
3300012906\|Ga0157295_10147231	All Organisms → cellular organisms → Bacteria → Proteobacteria	702	Open in IMG/M
3300012909\|Ga0157290_10111672	All Organisms → cellular organisms → Bacteria → Proteobacteria	823	Open in IMG/M
3300012911\|Ga0157301_10108400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	827	Open in IMG/M
3300012913\|Ga0157298_10135760	All Organisms → cellular organisms → Bacteria → Proteobacteria	717	Open in IMG/M
3300012929\|Ga0137404_11840419	All Organisms → cellular organisms → Bacteria → Proteobacteria	563	Open in IMG/M
3300012944\|Ga0137410_10953244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	728	Open in IMG/M
3300012951\|Ga0164300_10396418	All Organisms → cellular organisms → Bacteria → Proteobacteria	757	Open in IMG/M
3300012961\|Ga0164302_11020333	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M
3300013296\|Ga0157374_12841241	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300014166\|Ga0134079_10304873	All Organisms → cellular organisms → Bacteria → Proteobacteria	709	Open in IMG/M
3300014315\|Ga0075350_1097333	All Organisms → cellular organisms → Bacteria → Proteobacteria	693	Open in IMG/M
3300014497\|Ga0182008_10485919	All Organisms → cellular organisms → Bacteria → Proteobacteria	677	Open in IMG/M
3300014968\|Ga0157379_10541046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1083	Open in IMG/M
3300014968\|Ga0157379_11792071	All Organisms → cellular organisms → Bacteria → Proteobacteria	603	Open in IMG/M
3300014969\|Ga0157376_11972421	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300015190\|Ga0167651_1055418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	825	Open in IMG/M
3300015374\|Ga0132255_103077342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	712	Open in IMG/M
3300017647\|Ga0182748_1146574	All Organisms → cellular organisms → Bacteria → Proteobacteria	619	Open in IMG/M
3300017965\|Ga0190266_11116747	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300018089\|Ga0187774_10532402	All Organisms → cellular organisms → Bacteria → Proteobacteria	747	Open in IMG/M
3300018429\|Ga0190272_11746190	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M
3300018476\|Ga0190274_10016004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4793	Open in IMG/M
3300018481\|Ga0190271_13380414	All Organisms → cellular organisms → Bacteria → Proteobacteria	535	Open in IMG/M
3300019361\|Ga0173482_10495532	All Organisms → cellular organisms → Bacteria → Proteobacteria	591	Open in IMG/M
3300019871\|Ga0193702_1033043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	655	Open in IMG/M
3300020059\|Ga0193745_1098890	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300020591\|Ga0180223_1008165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4016	Open in IMG/M
3300021086\|Ga0179596_10456077	All Organisms → cellular organisms → Bacteria → Proteobacteria	647	Open in IMG/M
3300022756\|Ga0222622_10273945	Not Available	1152	Open in IMG/M
3300023169\|Ga0247762_1069091	All Organisms → cellular organisms → Bacteria → Proteobacteria	981	Open in IMG/M
3300023261\|Ga0247796_1068843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	642	Open in IMG/M
3300025297\|Ga0209758_1048978	Not Available	1496	Open in IMG/M
3300025903\|Ga0207680_11030776	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300025927\|Ga0207687_11156684	All Organisms → cellular organisms → Bacteria → Proteobacteria	665	Open in IMG/M
3300025927\|Ga0207687_11367960	All Organisms → cellular organisms → Bacteria → Proteobacteria	608	Open in IMG/M
3300026035\|Ga0207703_10742902	All Organisms → cellular organisms → Bacteria → Proteobacteria	935	Open in IMG/M
3300026041\|Ga0207639_10751071	All Organisms → cellular organisms → Bacteria → Proteobacteria	907	Open in IMG/M
3300026067\|Ga0207678_11737083	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300026075\|Ga0207708_11801190	All Organisms → cellular organisms → Bacteria → Proteobacteria	537	Open in IMG/M
3300026089\|Ga0207648_11516316	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300027866\|Ga0209813_10171197	All Organisms → cellular organisms → Bacteria → Proteobacteria	789	Open in IMG/M
3300027909\|Ga0209382_11993415	Not Available	557	Open in IMG/M
3300028380\|Ga0268265_11367465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas parafulva	709	Open in IMG/M
3300031231\|Ga0170824_121912648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	742	Open in IMG/M
3300031232\|Ga0302323_102610345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	577	Open in IMG/M
3300031455\|Ga0307505_10527110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	570	Open in IMG/M
3300031720\|Ga0307469_12261087	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300031731\|Ga0307405_10871863	All Organisms → cellular organisms → Bacteria → Proteobacteria	759	Open in IMG/M
3300031911\|Ga0307412_11149556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	693	Open in IMG/M
3300031943\|Ga0310885_10724285	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300032000\|Ga0310903_10641261	Not Available	569	Open in IMG/M
3300032005\|Ga0307411_11002671	All Organisms → cellular organisms → Bacteria → Proteobacteria	748	Open in IMG/M
3300032017\|Ga0310899_10555842	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300032126\|Ga0307415_100842012	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300033004\|Ga0335084_11224530	All Organisms → cellular organisms → Bacteria → Proteobacteria	749	Open in IMG/M
3300033233\|Ga0334722_11282154	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.29%
Host-Associated	Host-Associated	35.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.04%
Plants	Host-Associated → Plants	35.71%
Aquatic	Environmental → Aquatic	6.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.43%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.04%
Roots	Host-Associated → Plants → Roots	6.25%
Freshwater	Environmental → Aquatic → Freshwater	4.46%
Sediment	Environmental → Aquatic → Sediment	1.79%
Peat	Environmental → Terrestrial → Peat	0.89%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.96%
Loam	Environmental → Terrestrial → Soil → Loam	7.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.25%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	6.25%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.46%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.79%
Lake	Environmental → Aquatic → Freshwater → Lake	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.25%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.57%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.68%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.79%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.04%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	6.25%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.68%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.79%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	1.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.79%
Compost	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Compost	1.79%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.79%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.79%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.89%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309009	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300004808	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009233	Microbial communities of water from Amazon river, Brazil - RCM9	Environmental	Open in IMG/M
3300009261	Microbial communities of water from Amazon river, Brazil - RCM23	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009651	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063	Environmental	Open in IMG/M
3300009661	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-062	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014315	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleC_D1	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015190	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4a, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017647	Enriched Organic Plus compost microbial communities from Emeryville, California, USA - eDNA 3rd pass 37_C Kraft OP (version 2)	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019871	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a1	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300020591	Enriched Organic Plus compost microbial communities from Emeryville, California, USA - eDNA 5th pass 30_C Kraft OP (version 2)	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023169	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L081-202R-4	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300025297	Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKNP_07733500	2070309009	Soil	MRPARTAAIALVLAAAATAPAFGIASVSVYGLRAPEEISGFSLNDSTNFEKTKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARADAFLAHPRGIYAQVYLRRNFTIE
JGI10214J12806_129937002	3300000891	Soil	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKA
JGI10216J12902_1111148762	3300000956	Soil	VFGLKAPDEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERVRADAFLAQPRGVYAQVYL
JGI10216J12902_1220033771	3300000956	Soil	LTALLLTAVTTAAHAVTSVNVFGLKAPEEVGGYRLNDSTNFERSKPGEGYGLDYSKPGWKLDVFIYDLKRSAIPEDAKSAIVRAEFERAREDVFLAQPRGLYAQVYL
Ga0062591_1017579622	3300004643	Soil	MRSARQALLTLGLVAAATSSAFGIASVNVFGLRAPEEIEGFTLNDSTNFEKVKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFE
Ga0062380_103520152	3300004779	Wetland Sediment	MDPLRTALFALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERVRADAFLAQPRG
Ga0062381_104022752	3300004808	Wetland Sediment	MRAIPAALFALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERVRADAFLAQPRGLYAQVYLRRNFTIEDAGKR
Ga0062594_1028894901	3300005093	Soil	MRSRWIVLTASVWLAAASGAAHAITSVNMFGLKAPEEVGGFRLNDSTNFERSRPGEGYGLDYSQPGWKLDVFIYDLKRNAIPEDAKSAIVRAEFERSRED
Ga0066672_110090131	3300005167	Soil	MRAVRTAAVALVLGAVAVAPAFGVASVSVFGLRAPEEISGFTLNDSTNFEKLKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDVKSAIVRAEFERVRADTFLAQPRGIYAQ
Ga0066676_106531071	3300005186	Soil	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGIYAQVYLRRNFTID
Ga0070683_1016850832	3300005329	Corn Rhizosphere	MRSIRAALFALVFAAAATGPAFAIASVSVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGL
Ga0070673_1001377001	3300005364	Switchgrass Rhizosphere	MRSIPAALFALVFAAAATGPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIV
Ga0070713_1014508402	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRAIPAALFALVFGAAATAPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGIYAQVYLRRNFTID
Ga0070701_111294782	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MQAARTALFALVFGAAATVPAFGIASVNVFGLKAPDEIEGFTLNDSTSFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERVRADAFLAQPRGIYVQVYLRRNFTIE
Ga0070705_1016209741	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYA
Ga0070679_1007364542	3300005530	Corn Rhizosphere	MRAFRIAAIALVLGAVATAPAFGIASVSVYGLRAPEEISGFTLNDSTNYEKLKPGDGYALDYSQSGWKLDVFIYDLKRAAIPDDVKSAIVRAEF
Ga0070684_1015171612	3300005535	Corn Rhizosphere	MPSPRTALFALVFAAAATGPAFGIASVNVFGLRAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDVKTAIVKAEFERARADA
Ga0070695_1013647082	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MHAARTALFALVFGAAATVPAFGIASVNVFGLKAPEDIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARTDVFLAQPRGIYAQVYLRRNFTIDDGA
Ga0066670_108326582	3300005560	Soil	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDFKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLR
Ga0070664_1004671811	3300005564	Corn Rhizosphere	MRSIPTVLFALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARTDAFLAQPRGIYAQVYLRRNFTIDDG
Ga0068863_1010723742	3300005841	Switchgrass Rhizosphere	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDD
Ga0068862_1013952012	3300005844	Switchgrass Rhizosphere	MRSIPAALFALVFGAAAIVPAYGIASVSVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARTDAFLAQPRGIYAQVYLRRNFT
Ga0075365_104331401	3300006038	Populus Endosphere	MPSLKTALVAIVLGAAATTAAHAIASVTVFGLKAPEDIGGFTLNDSVNYERAKAGEGYGLDYSQPGWKLDVYIYDLKRNAIPADAKSAIVRAEFERSREDVFLAQPRGLYAQVYLRRNFTIEDAR
Ga0066652_1015234212	3300006046	Soil	MRVLPAALLALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDPTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVK
Ga0075363_1005595271	3300006048	Populus Endosphere	MRAIPTALFALVFGAIATAPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERVRADAFLA
Ga0075028_1006851441	3300006050	Watersheds	MVSLRTALFALVFGAAATGPAFGIASVNVFGLRAPEEIDGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARADAFLAQPRGLYAQ
Ga0075362_104636781	3300006177	Populus Endosphere	MRAVRTAAVALVLGAVAVAPAFGIAAVSVFGLKAPEEISGFTLNDSTNFEKLKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDVKTAIVRAEFERARADTFLAQPRGIYAQVYLRRNFTIEDSAK
Ga0075362_107426212	3300006177	Populus Endosphere	MPSLKTALVAMVLGAAATTAAHAIASVSVFGLKAPEEIGGFTLNDSVNYERSKPGDGYGLDYSQPGWKLDVYIYDLKRNAIPADAKSAIVRAEFERS
Ga0075367_109302711	3300006178	Populus Endosphere	MPSLKTALVAMVLGAAATTAAHAIASVSVFGLKAPEEIGGFTLNDSVNYERSKPGEGYGLDYSQPGWKLDVYIYDLKRNAIPADAKSAIVRAEFER
Ga0075367_109693631	3300006178	Populus Endosphere	MRAIPAALFALVFGAAATGPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARADAFMAQP
Ga0079222_119840661	3300006755	Agricultural Soil	MRVIPAALFALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARADAF
Ga0066658_107751362	3300006794	Soil	MRAIPTALFALVFGAIATAPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERVRAEAFLAQPRGLYAQVYLRRNFTIDDA
Ga0075424_1017802592	3300006904	Populus Rhizosphere	MRVLPATLFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERA
Ga0105245_111666902	3300009098	Miscanthus Rhizosphere	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLY
Ga0105247_113625092	3300009101	Switchgrass Rhizosphere	MRSIPAVLFALVFGAAATVPAFGIASVNVFGLKAPDEIEGFTLNDSTSFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRTAIPDDAK
Ga0103856_100837781	3300009233	River Water	MRFLKTALGAMMLGAAATTAALAIAPVTVFGLKAPEEISGFTLNDSVNYEKAKPGDGYGLDYSQPGWKLDVFIYDLKRNAIPDDAKSAIVRAEFERSREDAFLAVPRKK
Ga0103870_10448862	3300009261	River Water	MRFLKTALGAMMLGAAATTAALAIAPVTVFGLKAPEEISGFTLNDSVNYEKAKPGDGYGLDYSQPSWKLDVYIYDLKRNAIPPDAKSAIVRAEFERSREDTFMAQPRGLYAQ
Ga0105238_127034941	3300009551	Corn Rhizosphere	MRALPTAAIALVLGAAAVSPAFGIASVNVFGLRAPEEITGFQLNDSTNFEKIRPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDVKTAIVKAE
Ga0105249_121197262	3300009553	Switchgrass Rhizosphere	MRAFRTAAIALVLGAAAVAPAFGIAAVSVFGLKAPEEISGFTLNDSTNYEKLKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDVKSAIVRAEFERV
Ga0105859_12230232	3300009651	Permafrost Soil	MRAIPAALFALVFGAVATGPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFE
Ga0105858_11308022	3300009661	Permafrost Soil	MRAIPAALFALVFGAVATGPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDASSAIVKAEFERARADAFLAQPRGLYAQVYLRRNFTVE
Ga0126315_111789192	3300010038	Serpentine Soil	MRLSSAALLALVLSAAATTAAYAIASVTVFGLKAPEEIDGFTLNDSVNFERAKAGEGYGLDYSRSGWKLDVYIYDLKRSAIPDDAKSAIVRAEFERSREDAFLAQPR
Ga0099796_101097032	3300010159	Vadose Zone Soil	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDFKRAAIPDDAKSAIVKAEFERARAEAFLAQ
Ga0126306_115110001	3300010166	Serpentine Soil	MRPVLTAAIALVLAAAATAPAFGIASVSVYGLRAPEEISGFTLNDSTNLEKTKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARADAFLAQPRGIYAQ
Ga0105239_120249371	3300010375	Corn Rhizosphere	MRSIPTVLFALVFGAAATAPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRTAIPDDAKSAIVKAEFER
Ga0134124_127898682	3300010397	Terrestrial Soil	MRAARTALFALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARADAFLAQPRGIYAQVYLRRNFTIDDAAK
Ga0134122_104893932	3300010400	Terrestrial Soil	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNYTIDDVA
Ga0137378_111903141	3300012210	Vadose Zone Soil	MRAVRTAAVALVLGAVAVAPAFGVASVSVFGLKAPEEISGFTLNDSTNFEKLKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDVKSAIVRAEFERVRADTFLAQ
Ga0150985_1102463671	3300012212	Avena Fatua Rhizosphere	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKA*
Ga0137361_111006971	3300012362	Vadose Zone Soil	MRTIPTVLFALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAK
Ga0150984_1117356312	3300012469	Avena Fatua Rhizosphere	MRAFRTAAIALVLAAVATAPAFGVASVSVFGLKAPEEISGFTLNDSTNFEKLKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDVKSA
Ga0157303_102772021	3300012896	Soil	MRSIPAALFALVFGAAAIVPAYGIASVSVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRSAIPEDAKSAIVRAEFERVRADAFLAQPRGVYGQVYLRHHRRHGQADALPVRR
Ga0157293_100643852	3300012898	Soil	LVFGAAATVPAFGIASVNVFGLKAPDEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERVRADAFLAQPRGVYAQVYLRRNFTIDDPSKRT
Ga0157288_101474642	3300012901	Soil	MRAARTALFALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERVRADAFLAQPRGVYA
Ga0157282_102369932	3300012904	Soil	MRAARTALFALVFGAAATVPAFGIASVNVFGLKAPDEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPEDAKSAIVRAEFE
Ga0157295_101472311	3300012906	Soil	MRAARTALFALVFGAAATVPAFGIASVNVFGLKAPDEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPEDAKSAIVRAEFERVRADAFLAQPRGSMARSICGTIDDTAKRTRFQCA
Ga0157290_101116721	3300012909	Soil	MRPARTAAIALVLAAAATAPAFGIASVSVYGLRAPEEISGFALNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFER
Ga0157301_101084001	3300012911	Soil	MRAARTALFALVFGAAATVPAFGIASVNVFGLKAPDEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPEDAKSAIVRAEFERVR
Ga0157298_101357601	3300012913	Soil	MRAARTALFALVFGAAATVPAFGIASVNVFGLKAPDEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERVRADAFLAQPRGVYAQVYLRRNFTIDDPSKRTRF
Ga0137404_118404191	3300012929	Vadose Zone Soil	MRAVRTAAVALVLGAVAVAPAFGIAAVSVFGLKAPEEISGFTLNDSTNFEKLKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDVKSAIVRAEFERVRADTFL
Ga0137410_109532441	3300012944	Vadose Zone Soil	MRAIPTALFALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRG
Ga0164300_103964182	3300012951	Soil	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYL
Ga0164302_110203332	3300012961	Soil	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGIYAQVYLRRNFTVDDV
Ga0157374_128412412	3300013296	Miscanthus Rhizosphere	MRSIPAALFALVFAAAATGPAFAIASVSVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPEDAKSAIVR
Ga0134079_103048732	3300014166	Grasslands Soil	MRTIPTVLFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDFKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNF
Ga0075350_10973332	3300014315	Natural And Restored Wetlands	MAVRRISSIALAWFAAANLAGVTSAHATPVTVFGLKAPEEVGGFRFNDSTNLERSKPGDGFSLDYSQPGWKLDVFVYDLRRTAIPEDAKSAIVRAE
Ga0182008_104859191	3300014497	Rhizosphere	MRLSRIALLTFGLVAAATSSAFAVASVNVFGLRAPEEIEGFTLNDSTNFERTKPGDGYGLDYSQSGWKLDVFIYDLKRVAIPDDPKSAIVRAEFERARSDAF
Ga0157379_104792252	3300014968	Switchgrass Rhizosphere	MQAARTALFALVFGAAATVPAFGIASVNVFGLKAPDETEGFTLNDSTSFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPEDAKSAIVRAEFERVRADAFLAQPARGLWPGLSAAPSTTRPSGRASSAPHST*
Ga0157379_105410461	3300014968	Switchgrass Rhizosphere	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIDDVA
Ga0157379_117920712	3300014968	Switchgrass Rhizosphere	MRATRTAVIALVLAAAATAPAFGIAPVSVYGLKAPEEISGFTLNDSTNFEKTKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARADAFLAQPRGIYAQVYLRRNF
Ga0157376_119724211	3300014969	Miscanthus Rhizosphere	MRVLPAALLALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGIYAQVYLRRNF
Ga0167651_10554181	3300015190	Glacier Forefield Soil	MQAVRTALFALVFGAAATVPAFGIAAVNVFGLKAPDEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPEDAKSAIVRAEFERVRADAFLAQPRGVY
Ga0132255_1030773421	3300015374	Arabidopsis Rhizosphere	MRSARTALLALGLIAAATAPAWAIASVNVFGLRAPEEIEGFTLNDSTNFEKVKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARADAFLAAPRG
Ga0182748_11465742	3300017647	Compost	MTARTAAFALVFWAAASAEAFAIASVNVYGLRAPEEISGFTLNDSTNFEKVKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARADAYLAQPRGIYAQVYLRRNFTV
Ga0190266_111167472	3300017965	Soil	MRPARTAAIALVLAAAATAPAFGIASVSVYGLRAPEEISGFALNDSTNFEKTKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARADAFLAHPRGIYAQVYLRRNFTVE
Ga0187774_105324021	3300018089	Tropical Peatland	MPRAWTAAIALVLGAAATGPAFGIAAVNVFGLRAPEEIAGFTLNDSTNFERGKPGDGYGLDYSQSGWKLDVFIYDLKRVAIPDDVKSAIVKAEFERSRAEAFLSQPRG
Ga0190272_117461902	3300018429	Soil	MRACRTALFALVFGAAATVAAATVARAIAPVTVFGLRAPDEVGGFKLNDSTNFERTKPGDGYGLDYSQPGWKLDVFIYDLKRNAIPDDAKSAIVRAEFERSREDVFLAQPRGL
Ga0190274_100160042	3300018476	Soil	MRARGTALIALVLLAAATTAAHAIASVTVFGLRAPDEVGGFRLNDSMNFERSKPGEGYSLDYSQPGWKLDVFIYDLKRSAIPDDAKSAM
Ga0190271_133804142	3300018481	Soil	MRPARTAAIALVLAAAATAPAFGIASVSVYGLRAPEEISGFALNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKAAIVRAEFERARADAFLAHPRGIYAQVYLRRNFTIEDGG
Ga0173482_104955321	3300019361	Soil	MRAIPAVLFALVFGAAATVPAFGIASVNVFGLKAPDEIEGFTLNDSTSFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEF
Ga0193702_10330431	3300019871	Soil	MRSIPAALFALVFGAVATVPAFGIASVTVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERAR
Ga0193745_10988901	3300020059	Soil	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARA
Ga0180223_10081655	3300020591	Compost	MTARTAAFALVFWAAASAEAFAIASVNVYGLRAPEEISGFTLNDSTNFEKVKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARADAYLAQPRGIYAQVYLRRNF
Ga0179596_104560772	3300021086	Vadose Zone Soil	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDFKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVYLRRNFTIEDA
Ga0222622_102739451	3300022756	Groundwater Sediment	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFL
Ga0247762_10690912	3300023169	Plant Litter	MRARWTVLIVSMFVAAASTAAHAVASVNVFGLKAPEEVVGFRLNDSTNFERNKPGEGYGLDYSLPGWKLDVFIYDLKRSAIPEDAKSAIVRAEFERSREDVFLAQPRGLYAQVYLRRNFTIED
Ga0247796_10688432	3300023261	Soil	MRAARTALFALVFGAAAIVPAYGIASVSVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARTDAFLAQPRGIYAQVY
Ga0209758_10489781	3300025297	Arabidopsis Rhizosphere	MRAFRTAAIALVLAAVATAPAFGVASVSVFGLKAPEEISGFTLNDSTNFEKLKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPEDVKSAIVRAEFERARADTFFAQPRGIYAQVYLKRNFTIEDSAKR
Ga0207680_110307762	3300025903	Switchgrass Rhizosphere	MMRAIPAALFALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDA
Ga0207687_111566842	3300025927	Miscanthus Rhizosphere	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAK
Ga0207687_113679601	3300025927	Miscanthus Rhizosphere	MRVLPAALLALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIV
Ga0207703_107429022	3300026035	Switchgrass Rhizosphere	MRAARTALFALVFGAAATVPAFGIASVNVFGLKAPDEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPEDAKSAIVRAEFERVRADAFLAQ
Ga0207639_107510711	3300026041	Corn Rhizosphere	MRAIPAVLFALVFGAAATVPAFGIASVNVFGLKAPEDIEGFTLNDSTNFEKIRPGEGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAE
Ga0207678_117370832	3300026067	Corn Rhizosphere	MRSIPAALFALVFGAAAIVPAYGIASVSVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARTDAFLAQPRGIYAQ
Ga0207708_118011902	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVK
Ga0207648_115163161	3300026089	Miscanthus Rhizosphere	MRSIPAALFALVFGAAAIVPAYGIASVSVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARTDAFLAQPRGIYAQV
Ga0209813_101711972	3300027866	Populus Endosphere	MRAVRTAAVALVLGAVAVAPAFGIAAVSVFGLKAPEEISGFTLNDSTNFEKLKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDVKTAIVRAEFERARAD
Ga0209382_119934151	3300027909	Populus Rhizosphere	MQLPKTALLGFALGAGLAVAPAWAVTSVTVFGLKAPDEVGGFTLNDSTNFEKTKPGDGYGLDYAQPGWKLDVFVYDLRRVAIPDDAKSAIVRAEFERSRQDVFLAAPRGLYAQV
Ga0268265_113674652	3300028380	Switchgrass Rhizosphere	MRSIPAALFALVFGAAAIVPAYGIASVSVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARTDAFLAQPR
Ga0170824_1219126481	3300031231	Forest Soil	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDFKRAAIPDDAKSAIVKAEFERARAEAFLAQPRGLYAQVY
Ga0302323_1026103452	3300031232	Fen	MRAIPAALFALVFGAAATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIRPGDGFGLDYSQSNWKLDVFIYDLKRAAIPDDTK
Ga0307505_105271102	3300031455	Soil	MRLLRTAAIALVLGTAASGPAWAIASVTVFGLRAPEEIAGFTLNDSTNFEKGRPGDGYGLDYSQSGWKLDVFIYDLKRVAIPED
Ga0307469_122610872	3300031720	Hardwood Forest Soil	MRAIPAALFALVFGAAATVPAFGIASVNVFGLKAPEDIEGFTLNDSTNFEKIRPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERAR
Ga0307405_108718632	3300031731	Rhizosphere	MRSIPAALFALVFGAAATVPAYGIASVSVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARTD
Ga0307412_111495561	3300031911	Rhizosphere	MRSIPAALFALVFGAAATVPAYGIASVSVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARADAFLAQ
Ga0310885_107242851	3300031943	Soil	MRAIPTALFALVFGAVATVPAFGIASVNVFGLKAPEEIEGFTLNDSTNFEKIKPGDGFGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVKAEFERARAEAFLAQ
Ga0310903_106412611	3300032000	Soil	MRSRWIVLTASVWLAAASGAAHAITSVNMFGLKAPEEVGGFRLNDSTNFERSRPGEGYGLDYSQPGWKLDVFVYDLKRNAIPDDPKSAIVRAEFERSREDAFLA
Ga0307411_110026711	3300032005	Rhizosphere	MRPARTAAIALVLAAAATAPAFGIASVSVYGMRAPEEISGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERAR
Ga0310899_105558422	3300032017	Soil	MRSIPAALFALVFGAAAIVPAYGIASVSVFGLKAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDAKSAIVRAEFERARTDAF
Ga0307415_1008420122	3300032126	Rhizosphere	MLSLKTALVALVLGAAATSAAHAIASVTVFGLKAPEEIGGFTLNDSVNYERAKAGEGYGLDYSQPGWKLDVYIYDLKRNAIPADAK
Ga0335084_112245302	3300033004	Soil	MRLIPAALFALVFGAAATVPAFGIASVNVFGLRAPEEIEGFTLNDSTNFEKIKPGDGYGLDYSQSGWKLDVFIYDLKRAAIPDDPKSAIVRAEFERARADAFLAQPRGLYAQ
Ga0334722_112821542	3300033233	Sediment	MRAAPTAIIALVLAAAATAPAFGIASVTVFGLRAPEEIGGFTLNDSINFEKTKPGDGYGLDYSQSGWKLDVFIYDLKRIAIPEDVKSA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084466

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences