Metagenome Family F084463

Basic Information
Family ID	F084463
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	82 residues
Representative Sequence	MVRTVLAAAILAGAPAFALAQSASAPLIVTATVVSTCNVDVPRSAEVSTFATMPMTVTCARGGITPRVQRPIAPRRSEVRDAVLIIDF
Number of Associated Samples	87
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	42.22 %
% of genes near scaffold ends (potentially truncated)	32.14 %
% of genes from short scaffolds (< 2000 bps)	68.75 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Most Common Taxonomy
Group	Unclassified (58.929 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.179 % of family members)
Environment Ontology (ENVO)	Unclassified (37.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.250 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 17.24% β-sheet: 10.34% Coil/Unstructured: 72.41%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF05229	SCPU	59.82
PF00577	Usher	4.46
PF04203	Sortase	2.68
PF03551	PadR	1.79
PF13649	Methyltransf_25	1.79
PF08545	ACP_syn_III	0.89
PF13473	Cupredoxin_1	0.89
PF01464	SLT	0.89
PF00571	CBS	0.89
PF02954	HTH_8	0.89
PF13193	AMP-binding_C	0.89
PF01261	AP_endonuc_2	0.89
PF04366	Ysc84	0.89
PF07637	PSD5	0.89
PF00011	HSP20	0.89
PF04960	Glutaminase	0.89
PF07883	Cupin_2	0.89
PF08241	Methyltransf_11	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG5430	Fimbrial subunit ScuA/B, ScuA/B/SCPU domain	Extracellular structures [W]	59.82
COG3188	Outer membrane usher protein FimD/PapC	Cell motility [N]	8.93
COG3764	Sortase (surface protein transpeptidase)	Cell wall/membrane/envelope biogenesis [M]	2.68
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.79
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.79
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.79
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG2066	Glutaminase	Amino acid transport and metabolism [E]	0.89
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.89

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.93 %
All Organisms	root	All Organisms	41.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.93 %
cellular organisms	root	All Organisms → cellular organisms	41.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.93 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.07 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.93 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	8.93 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.89 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.93 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	3.57 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.57 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	2.68 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.79 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.93 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.57 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	2.68 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.79 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.89 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.89 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.57 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	2.68 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.79 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.89 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.89 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.89 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.57 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	2.68 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.79 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.89 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.89 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.89 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.57 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2.68 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.79 %
unclassified Lysobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → unclassified Lysobacter	0.89 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.89 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.89 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.93 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.57 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	2.68 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.79 %
Lysobacter sp. Alg18-2.2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → unclassified Lysobacter → Lysobacter sp. Alg18-2.2	0.89 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.89 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.89 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY01BWPLA	Not Available	510	Open in IMG/M
3300004114\|Ga0062593_100083228	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2176	Open in IMG/M
3300004114\|Ga0062593_101425837	Not Available	742	Open in IMG/M
3300004157\|Ga0062590_100219144	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1397	Open in IMG/M
3300004157\|Ga0062590_101574020	Not Available	663	Open in IMG/M
3300004480\|Ga0062592_102201538	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300004643\|Ga0062591_100259503	Not Available	1333	Open in IMG/M
3300005294\|Ga0065705_10260576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1162	Open in IMG/M
3300005353\|Ga0070669_100110915	All Organisms → cellular organisms → Bacteria	2082	Open in IMG/M
3300005354\|Ga0070675_100000263	All Organisms → cellular organisms → Bacteria	34450	Open in IMG/M
3300005356\|Ga0070674_100439583	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300005456\|Ga0070678_101974344	Not Available	552	Open in IMG/M
3300005526\|Ga0073909_10246564	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300005578\|Ga0068854_100480223	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1043	Open in IMG/M
3300005617\|Ga0068859_102891537	Not Available	526	Open in IMG/M
3300005841\|Ga0068863_102037156	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300005843\|Ga0068860_100551798	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1154	Open in IMG/M
3300005844\|Ga0068862_101221036	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300006178\|Ga0075367_10656190	Not Available	667	Open in IMG/M
3300006237\|Ga0097621_100410376	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	1214	Open in IMG/M
3300006237\|Ga0097621_101992522	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → unclassified Lysobacter → Lysobacter sp. Alg18-2.2	555	Open in IMG/M
3300006358\|Ga0068871_100340754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1324	Open in IMG/M
3300006358\|Ga0068871_100501439	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300006844\|Ga0075428_100000012	All Organisms → cellular organisms → Bacteria	176329	Open in IMG/M
3300009094\|Ga0111539_10404685	All Organisms → cellular organisms → Bacteria	1589	Open in IMG/M
3300009148\|Ga0105243_10230988	Not Available	1641	Open in IMG/M
3300009156\|Ga0111538_10027675	All Organisms → cellular organisms → Bacteria → Proteobacteria	7379	Open in IMG/M
3300009545\|Ga0105237_11155971	Not Available	781	Open in IMG/M
3300009609\|Ga0105347_1116593	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1019	Open in IMG/M
3300009610\|Ga0105340_1013518	All Organisms → cellular organisms → Bacteria	3212	Open in IMG/M
3300010399\|Ga0134127_12601194	Not Available	586	Open in IMG/M
3300010403\|Ga0134123_12396564	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300011402\|Ga0137356_1000571	All Organisms → cellular organisms → Bacteria	6160	Open in IMG/M
3300011443\|Ga0137457_1250602	Not Available	606	Open in IMG/M
3300012212\|Ga0150985_108672006	Not Available	595	Open in IMG/M
3300012212\|Ga0150985_110180136	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300012212\|Ga0150985_112650746	Not Available	598	Open in IMG/M
3300012212\|Ga0150985_117434750	Not Available	607	Open in IMG/M
3300012212\|Ga0150985_118211590	Not Available	980	Open in IMG/M
3300012469\|Ga0150984_113645647	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300012892\|Ga0157294_10307510	Not Available	509	Open in IMG/M
3300012910\|Ga0157308_10360252	Not Available	552	Open in IMG/M
3300012951\|Ga0164300_10798629	Not Available	585	Open in IMG/M
3300012984\|Ga0164309_10797483	Not Available	760	Open in IMG/M
3300012987\|Ga0164307_10603013	Not Available	847	Open in IMG/M
3300013308\|Ga0157375_10472612	All Organisms → cellular organisms → Bacteria → Proteobacteria	1419	Open in IMG/M
3300014326\|Ga0157380_10840754	Not Available	939	Open in IMG/M
3300014326\|Ga0157380_10872817	Not Available	923	Open in IMG/M
3300014876\|Ga0180064_1146714	Not Available	501	Open in IMG/M
3300014968\|Ga0157379_12347830	Not Available	532	Open in IMG/M
3300014969\|Ga0157376_10353619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1407	Open in IMG/M
3300014969\|Ga0157376_11117759	Not Available	814	Open in IMG/M
3300015200\|Ga0173480_10741838	Not Available	620	Open in IMG/M
3300015371\|Ga0132258_10005792	All Organisms → cellular organisms → Bacteria → Acidobacteria	24358	Open in IMG/M
3300015371\|Ga0132258_10120422	All Organisms → cellular organisms → Bacteria	6236	Open in IMG/M
3300015371\|Ga0132258_10313246	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	3865	Open in IMG/M
3300015371\|Ga0132258_11730982	All Organisms → cellular organisms → Bacteria → Proteobacteria	1576	Open in IMG/M
3300015373\|Ga0132257_100133603	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2894	Open in IMG/M
3300015373\|Ga0132257_103713946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300015374\|Ga0132255_106299281	Not Available	502	Open in IMG/M
3300018469\|Ga0190270_10439917	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1222	Open in IMG/M
3300018481\|Ga0190271_12646650	Not Available	602	Open in IMG/M
3300018481\|Ga0190271_13438270	Not Available	530	Open in IMG/M
3300019362\|Ga0173479_10280841	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300023071\|Ga0247752_1067693	Not Available	581	Open in IMG/M
3300025923\|Ga0207681_10142110	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1789	Open in IMG/M
3300025923\|Ga0207681_10798843	Not Available	788	Open in IMG/M
3300025926\|Ga0207659_10000369	All Organisms → cellular organisms → Bacteria	27027	Open in IMG/M
3300025930\|Ga0207701_11236743	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300025932\|Ga0207690_11845557	Not Available	505	Open in IMG/M
3300025981\|Ga0207640_11419303	Not Available	622	Open in IMG/M
3300026035\|Ga0207703_12026935	Not Available	552	Open in IMG/M
3300026075\|Ga0207708_11471764	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300026118\|Ga0207675_102507285	Not Available	526	Open in IMG/M
3300027907\|Ga0207428_10000105	All Organisms → cellular organisms → Bacteria	115713	Open in IMG/M
3300028380\|Ga0268265_11067921	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300031562\|Ga0310886_10870024	Not Available	571	Open in IMG/M
3300031847\|Ga0310907_10603294	Not Available	598	Open in IMG/M
3300031854\|Ga0310904_10151058	All Organisms → cellular organisms → Bacteria → Proteobacteria	1349	Open in IMG/M
3300031858\|Ga0310892_10116147	Not Available	1494	Open in IMG/M
3300031908\|Ga0310900_11691408	Not Available	537	Open in IMG/M
3300031943\|Ga0310885_10102811	Not Available	1299	Open in IMG/M
3300032000\|Ga0310903_10216155	All Organisms → cellular organisms → Bacteria → Proteobacteria	905	Open in IMG/M
3300032012\|Ga0310902_10668332	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	697	Open in IMG/M
3300032017\|Ga0310899_10243249	Not Available	814	Open in IMG/M
3300032074\|Ga0308173_11477866	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300032122\|Ga0310895_10350500	Not Available	711	Open in IMG/M
3300032211\|Ga0310896_10223515	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300032211\|Ga0310896_10250013	Not Available	896	Open in IMG/M
3300034151\|Ga0364935_0204647	Not Available	636	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	50.00%
Host-Associated	Host-Associated	50.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	50.00%
Terrestrial	Environmental → Terrestrial	45.54%
Aquatic	Environmental → Aquatic	4.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	25.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.54%
Sediment	Environmental → Aquatic → Sediment	4.46%
Roots	Host-Associated → Plants → Roots	4.46%
Floodplain	Environmental → Terrestrial → Floodplain	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	12.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.46%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.57%
Loam	Environmental → Terrestrial → Soil → Loam	1.79%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.89%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.89%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	12.50%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	11.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.46%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.79%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	11.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	8.04%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	8.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.36%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.46%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	4.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	3.57%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.79%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011402	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT830_2	Environmental	Open in IMG/M
3300011443	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT630_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014876	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200_16_10D	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300023071	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_04684510	2170459010	Grass Soil	VVVRTVLAAVVLAGVPSPAHAQSASAPLLVEATVVSTCRLDIPRSAEASTFATMPFVVTCARRGATPRVRKRPIAPRRSEVRDAVLIVDF
Ga0062593_1000832283	3300004114	Soil	MVRAVLAVAILAGVGQLAQAQSASAPLIVTATVVSSCQVAAPRQAEPSRFSTLQVGVTCARGRVSPRVQRPAVPRRSEVRDAVLVIDF*
Ga0062593_1014258372	3300004114	Soil	MVRTVLAAALLTGAPALAWAQEQSAPLFITATVVSTCRVEVPRSAEASTFAIMPVTVTCARGTTPRVQRPIAPAPHLEVRDALLIIDF*
Ga0062590_1002191441	3300004157	Soil	GSGSIDEMVRAVLAVAILAGVGQLAQAQSASAPLIVTATVVSSCQVAAPRQAEPSRFSTLQVGVTCARGRVSPRVQRPAVPRRSEVRDAVLVIDF*
Ga0062590_1015740201	3300004157	Soil	RAMVRRVLAAAILFCAPALMQAQASSSPLIVTATVVSTCSVDVPRSAEASIFATMPVSVICAKGSAHPRVQRPIMQSRSEVRDAILTIDF*
Ga0062592_1022015381	3300004480	Soil	MVRVALMAVIFTAVAGLAQAQSASAPLIVTATVVSTCQVSSPRQAEPSRFSTLPVAVSCARGRVAPRVQRPAAPRRSEVRDAVLVIDF*
Ga0062591_1002595032	3300004643	Soil	MVRAVLAVAILAGVGQLAQAQSASAPLIVTATVVSSCQVAAPRQAEPSRFSTLQVGVTCARGRVSPRVQRPAVPRRSEVRDALVVIDF*
Ga0065705_102605761	3300005294	Switchgrass Rhizosphere	MVRTVLAAAILTGAPALAWAQEQSAPLFITATVVSSCRVEVPRSAEASTFAIMPVTVTCARGTTPRVQRPIAPRTEVRDALLIIDF*
Ga0070680_1011553921	3300005336	Corn Rhizosphere	VSTCKVDAPRSAESSLLSTLPVAVTCARRGAAARVQRPSTPRRSEMRDAVLVIDF*
Ga0070669_1001109154	3300005353	Switchgrass Rhizosphere	MVRRVLAAAILFCAPALMQAQASSSPLIVTATVVSTCSVDVPRSAEASIFATMPVSVICAKGSAHPRVQRPIMQSRSEVRDAILTIDF*
Ga0070675_10000026318	3300005354	Miscanthus Rhizosphere	MVRIVLAAAMLSVVPALAQAQSASAPLIVTATVVSTCKVDVPRMVEPSVFTTFPVTMTCARRGTTPRVQRPSAPRRSEVRDAVLIIDF*
Ga0070674_1004395831	3300005356	Miscanthus Rhizosphere	MRNVSAAAILAVIFAGAPALAQEQSAPLFVTATVVSTCRVEVPRSAEASTFAIMPVTVTCARGTTPRVQRPTAPAPHVEVRDALLVIDF*
Ga0070678_1019743442	3300005456	Miscanthus Rhizosphere	MVRTGLVTAILAGAPALALAQSASAPLIVTATVVSTCNVDVPQSADASTFATLPVVVKCAKRGTTPRIERPVAPRRSEVRDAVLIIDF*
Ga0073909_102465641	3300005526	Surface Soil	MVRIVLAAAILSVVPALVQAQSASAPLIVTATVVSTCKVDVPRMVEPSVFATFPVTMTCARPGTTPRVQRPIAPRRSEVRDAVLIIDF*
Ga0068854_1004802231	3300005578	Corn Rhizosphere	MIRPVLAAALLAGAPALAHGQSASAPLIVTATVVSTCKVDVPRSAEIASFAIMPVGVTCARRGVTPRVQRPIAPHREDRDALLVIDF*
Ga0068859_1028915371	3300005617	Switchgrass Rhizosphere	RRVRLRSLLMVRIVLAAAMLSVVPALAQAQSASAPLIVTATVVSTCKVDVPRMVEPSVFTTFPVTMTCARRGTTPRVQRPSAPRRSEVRDAVLIIDF*
Ga0068863_1020371561	3300005841	Switchgrass Rhizosphere	MVRIVLAAAMLSVVPALAQAQSASAPLIVTATVVSTCKVDVPRMVEPSVFTTFPVTMTCARRGTTPRVQRPSAPR
Ga0068860_1005517983	3300005843	Switchgrass Rhizosphere	LAAHAQSASAPLIVTATVVASCKVDVPRSADASTFATMPIAVTCARRGSVPRVQRPTAPRRSRGEVRDAVLVIDF*
Ga0068862_1012210361	3300005844	Switchgrass Rhizosphere	GGPALVQAQSASAPLIVTATVVSTCKVEVPRSAEASTFATMPVAVTCATRGTTPRVQRPIAPRRRDVRDAVLIINF*
Ga0066652_1016912762	3300006046	Soil	LIVTATVVSTCRVDVPTSVDASAFPTVPVAVTCARGSIAPRVQRPLAPQRSDVRDGQLVINF*
Ga0075367_106561901	3300006178	Populus Endosphere	RMERQMVRRVLVAVIVAGTPALAQTQSASAPLLVTATVVSTCNVDVPRSARSSTFATMPVSVTCAKGRAAPRVQRPLAPRRSDARDAILIINF*
Ga0097621_1004103762	3300006237	Miscanthus Rhizosphere	MILSGTPIVALAQSASAPLVVTATVVSTCRVDVPRSAEPANFATMPVAVACARRGATPRVQRPIAPPPRRSEVRDAVLVIDF*
Ga0097621_1019925221	3300006237	Miscanthus Rhizosphere	ALSRAQSASAPLIVTATVVSTCRVEVPRSAEASTFATMPIAVTCARRGTTPRVQRPIAPRRSEVRDAVLIIDF*
Ga0068871_1003407542	3300006358	Miscanthus Rhizosphere	MVRTVLAAAILAGAPAFALAQSASAPLIVTATVVSTCNVDVPRSAEVSTFATMPMTVTCARGGITPRVQRPIAPRRSEVRDAVLIIDF*
Ga0068871_1005014392	3300006358	Miscanthus Rhizosphere	MVRMFLVAAILAGVPAQPHAQSASAPLIVTATVVSTCRVEVPRDAEPGLLATLPVAVTCARRGVAARVQHPSPPPRRSDMRDAVLVIDF*
Ga0075428_10000001223	3300006844	Populus Rhizosphere	MVRTILAAAIFAGAPALAQTQSVSAPLTVTATVVSTCKVDVPRSAESSTFASMPVTVTCAKGGATPRVQHPNAPIAPRRSEVRDAVLIINF*
Ga0079218_121375132	3300007004	Agricultural Soil	SASAPLIVTATVVSTCHVDVPRSAEASNFATMPVSVSCSKGSTTPRVQRPIAPRRTELQDAVLIINF*
Ga0079218_128606422	3300007004	Agricultural Soil	VVSTCNVDVPRSAEASNFATLAVSVTCVKGRTTPRVQRPIAPRRSEVRDAVLTINF*
Ga0111539_104046853	3300009094	Populus Rhizosphere	MAVIFTAVAGLAQAQSASAPLIVTATVVSTCQVSSPRQAEPSRFSTLPVAVSCARGRVAPRVQRPAAPRRSEVRDAVLVIDF*
Ga0105243_102309883	3300009148	Miscanthus Rhizosphere	APAVARAESASAPLLVTATVVSTCNVDVPGSAETAIFATIPVSVTCANGATTPRVQRPIAPPRSEVRDAVLVIDF*
Ga0111538_100276755	3300009156	Populus Rhizosphere	MVRRVLAAAILFCAPALMQAQASSSPLIVTATVVSTCSVDVPRSAEASIFATMPVSVICAKGGAHPRVQRPIMQPRSEVRDAILTIDF*
Ga0105242_131827531	3300009176	Miscanthus Rhizosphere	LLVTATVVSTCKVDVPRSAEASAFATIPVAVTCARRGAAARVQRPPVPRRSEVRDAVLIIDF*
Ga0105237_111559711	3300009545	Corn Rhizosphere	AVARAESASAPLLVTATVVSTCNVDVPGSAETAIFATIPVSVTCANGATTPRVQRPIAPPRSEVRDAVLVIDF*
Ga0105249_104555133	3300009553	Switchgrass Rhizosphere	APLIVTATVVSTCTVDVPQSAEASTFATMPVVLTCAKRGATPRVQRPIAPRHSEVRDAVLIIDF*
Ga0105347_11165932	3300009609	Soil	MVRTVLAAVILAGAPALAQTQSVSAPLFVTATVVSTCNVDVPRSADASRFATMPVAVTCAKGGATPRVQRPIASIAPRRSEVRDAVLIINF*
Ga0105340_10135183	3300009610	Soil	DGIARGELTMVRTVLAAAILAGAPVLAQTQSTSAPLIITATVVSTCKVEVPRSAEASIFATMPVSVSCAKGGTTPQVQRPIAPRRSEVRDAVLIINF*
Ga0134127_126011941	3300010399	Terrestrial Soil	MVRRVLAAAILFCAPALMQAQASSSPLIVTATVVSTCSVDVPRSAEASIFATMPVSVICAKGGATPRVQRPIMQPSSEVRDAILIIDF*
Ga0134122_114904671	3300010400	Terrestrial Soil	SASAPLIVTATVVATCKVDVPRSAEASTFATMPVAVTCARRGSAPRVQRPTAPRRSRGEVRDAVLIIDF*
Ga0134123_123965642	3300010403	Terrestrial Soil	MAVIFTAVAGLAQAQSASAPLIVTATVVSTCQVSSPRQAEPSRFSTLPVAVSCARGRVAPRVQRPAAPRRSEVRDA
Ga0134123_126080721	3300010403	Terrestrial Soil	PLVVTATVVSTCQVSSPRQAEPSRFSTLPVAVSCARGRVTPRVQRPAAPRRSEVRDAVLVIDF*
Ga0137356_10005715	3300011402	Soil	MEVMFRSILAAAILAGVPVLAQAQSASAPLTVTATVVSTCHVNAPREAEPSHFSTLPIAVNCARGRVTPRVQRPAAPRRSDVRDAVLVIDF*
Ga0137457_12506022	3300011443	Soil	MFRVFLAAAILAGVPALAQAQSVSAPLVVTATVVSTCHVNAPRQAEPALFSTLPVAVTCVRGRVAPRVQRPIAPRRSEVRDAVLIIDF*
Ga0150985_1086720062	3300012212	Avena Fatua Rhizosphere	MDGMVRTVLAAAILASAPALVYAQSASAPLFVTATVVSTCKVDVPRSAEVSTFATMPMTVTCAKGGVTPRIQRPVAPHSEVQDAVLIVNF*
Ga0150985_1101801362	3300012212	Avena Fatua Rhizosphere	MIRIVVTAALLSGVPGLALAQSAAAPLVVTATVVSTCKVDVPQSAAITTLATMPVSVICAKGSATPRVERPTAPPPRSEMRDAVLVIDF*
Ga0150985_1126507462	3300012212	Avena Fatua Rhizosphere	MIAMRRRLLAAAWLAGAPALALAQSNSAPLIVTATVVSTCQVDVPRSAEASTFTSFPVTVTCAKRGTTPRVERPIPPHPRSEVREAVLVIDF*
Ga0150985_1174347501	3300012212	Avena Fatua Rhizosphere	VVAAVFFAFAPVLLHAQSTSAPLVVSATVVSTCHVDVPRSAQPSTFATMPVMVTCVRGTTPRVQRPAAPHYTQLGDALLIIDF*
Ga0150985_1182115903	3300012212	Avena Fatua Rhizosphere	VVVALILASAPALAHGQSAAAPLLVTASVVSTCRVDVPRSAEASTFASMPITVTCARRGTTPRVQRPIALRRSEVRDAVLIIDF*
Ga0150984_1136456471	3300012469	Avena Fatua Rhizosphere	AQVQSASAPLFVTATVASTCAVDVPRSAEASTFPTMPMTVTCAKGGVAPRIQRPVAPRRSDVQDAVLIVNF*
Ga0157294_103075101	3300012892	Soil	MVRRVLAAAILFCAPALMQAQASSAPLIVTATVVSTCSVDVPRSAEASIFATMPVSVICAKGGAHPRVQRPIMQPRSEVRDAVLTIDF*
Ga0157283_101783102	3300012907	Soil	VTATVVSTCNVDVPQSADASMFASFPVTVTCAKRGTTPRVERPITPRRSEVRDAVLLIDF
Ga0157308_103602521	3300012910	Soil	MVRTVLAAALLTGAPALAWAQEQSAPLFITATVVSTCRVEVPRSAEASTFAIMPVTVTCARGTTPRVQRPIAPRTEVRDALLIIDF*
Ga0164300_107986291	3300012951	Soil	MVRTVLAAAILVGAPGLAHAQSASAPLIVTATVVSTCKVDVPTSAEASTFATMPVTVTCARRGTTPRVQRPIAPRRGEVRDAVLIIDFKRNASEAARINSESDPDG*
Ga0164298_109274792	3300012955	Soil	VTATVVSTCNVDVPRSAEAAIFATIPVSVTCANGATTPRVQRPIAPPRSEVRDAVLVIDF
Ga0164301_113081711	3300012960	Soil	SAALIVTATVVSTCRVDVPRSVDASMFPTVPVAVTCARGGTAPRVQRLIAPQRRTELRDAVLIINF*
Ga0164309_107974832	3300012984	Soil	MVRMFLVAAILAGVPAQPHAQSASAPLIVTATVVSTCRVEVPRDAEPGLLATLPVAVTCARRGVAARVQRPSPPPRRSDMRDAVLVIDF*
Ga0164307_102062073	3300012987	Soil	VSTCNVDVPQSASASVFATFPITVTCARRGTSPRVQRPTTPPRSEVQDAVLIINF*
Ga0164307_106030132	3300012987	Soil	VTVRTVLAAAIFAGVPLLAHAQSASAPLIVTATVISTCNVDVPQSAEASTFATVPVTVTCANRGTTPRVQRPIAPHRIEVRDAVLTIDF*
Ga0164305_111937482	3300012989	Soil	LLVTATVVSTCNVDVPGSAETAIFATIPVSVTCANGATTPRVQRPIAPPRSEVRDAVLVIDF*
Ga0163162_132885502	3300013306	Switchgrass Rhizosphere	SVSAPLIVTATVVSTCKVDVPRSAEASTFTTLPVAVTCAQGGTTPRVQRPIAPSAPRQSEVRDAVLIINF*
Ga0157375_104726123	3300013308	Miscanthus Rhizosphere	ALALAQAQSASAPLIVTATVVSTCNVDVPRSAEAAIFATIPVSVTCANGATTPRVQRPIAPPRSEVRDAVLVIDF*
Ga0157380_108407542	3300014326	Switchgrass Rhizosphere	MFRTLLAAVILAGVPVMSQAQSTSAPLMVTATVVSTCHVNSPSQAEATSFSTLPVAVSCARGRVAPRVQRPLPPPRRSEVRDAVLVIDF*
Ga0157380_108728172	3300014326	Switchgrass Rhizosphere	MKLMFRSIVAAAVLAGVPVSAQAQSAFAPLIVTATVVSSCKVDSPHQAEPSRFSTLPVAVTCARGRVTPRVQRPAAPRRREVSDAVLVIDF*
Ga0180064_11467142	3300014876	Soil	LAQTQSVSAPLFVTATVVSTCNVDVPRSADASRFATMPVAVTCAKGGATPRVQRPIASIAPRRSEVRDAVLIINF*
Ga0157379_123478302	3300014968	Switchgrass Rhizosphere	AAILVGAPALVRAQSASAPLMVTATVVSTCNVDVPRSAEASTFATMPMTVTCAKGGIRPRVQRPVAPRRSEVRDAVLIIDF*
Ga0157376_103536191	3300014969	Miscanthus Rhizosphere	MVRTVLAAAILAGAPAFALAQSASAPLIVTATVVSTCNVDVPRSAEVSTFATMPMTVTCARGGITPRVQRPIAPRRSEVRDAVLIID
Ga0157376_111177592	3300014969	Miscanthus Rhizosphere	SPALAHAQSASAPLIVTATVVSTCNVEVPRSAEAAIFATIPVSVSCANGGTTPRVQRPIAPPRGEVRDALLIIDF*
Ga0173480_107418382	3300015200	Soil	MIRTVLAAAILAGAPAVALAQEQVQSASAPLLVTATVVSTCNVDVPQSAEASTFTTFPVTVTCAKRGTTPRVERPSAPRRSEVRDAVLIIDF*
Ga0173480_112547002	3300015200	Soil	VSTCNVDVPGSAETAIFATIPVSVTCANGATTPRVQRPIAPPRSEVRDAVLVIDF*
Ga0132258_1000579218	3300015371	Arabidopsis Rhizosphere	MVRAVLAIAMLAGFVGQAQAQSASAPLIVTATVVSSCSVNSPRQAQPSQFSTLPVAVSCARGRVAPRVQRPAAPRRSEVRDAVLVIDF*
Ga0132258_101204224	3300015371	Arabidopsis Rhizosphere	MDRRVLAATILAGAPVLAHAQSASAPLIITATVVSTCRVEVPRSAEGSTFATLPVAVTCARRGTTPRVQRPIAPRRSEVRDAVLIIDF*
Ga0132258_103132465	3300015371	Arabidopsis Rhizosphere	LHAEGPAALEWKNVTRTVLAAAIFAGVPLLAHAQSASAPLIVTATVVSTCNVDVPRSAEAAIFATIPVSVTCANGGTTPRVQRPIAPHRSEVRDAVLVIDF*
Ga0132258_110461101	3300015371	Arabidopsis Rhizosphere	ASAPLIVTATVVSTCNVDVPRSAEAAIFATMPVSVTCAKGAATPRVQRPVAPRSEVRDAVLTIDF*
Ga0132258_117309823	3300015371	Arabidopsis Rhizosphere	MVRAVLTGAILAGVSVLAHAQSASAPLFVTATVVSTCRVEVPRTAEASTFATMPVAVTCARRGTTPRVQRPIAPRRSEVRDAVLIIDF*
Ga0132257_1001336035	3300015373	Arabidopsis Rhizosphere	LHAEGPAALEWKNVTRTVLAAAIFAGVPLLAHAQSASAPLIVTATVVSTCNVDVPRSAEAAIFATIPVSVTCANGGTTPRVQRPIAPPRREVHDAVLVIDF*
Ga0132257_1033166661	3300015373	Arabidopsis Rhizosphere	SASAPLVVTATVVSTCNVDVLHSASASVFATFPITVTCARRGTSPRVQRPTTPPRSEVQDAVLIINF*
Ga0132257_1037139461	3300015373	Arabidopsis Rhizosphere	GVSVLAHAQSASAPLFVTATVVSTCRVEVPRTAEASTFATMPVAVTCARRGTTPRVQRPIAPRRSEVRDAVLIIDF*
Ga0132255_1062992812	3300015374	Arabidopsis Rhizosphere	MVRAVLTGAILAGVSVLAHAQSASAPLFVTATVVSTCRVEVPRTAEASTFATMPVAVTCARRGTPPRVQRPIAPRRSEVRDAVLIIDF*
Ga0190270_104399172	3300018469	Soil	MVRTVLVATILAGAPPVLAQTQSASAPLFVTATVVSSCKVDVPRSAEASIVATMPVSVSCAKGGATPRVQRPIAPVAPRRSEVQDAVLIINF
Ga0190271_126466501	3300018481	Soil	MIRTVLTAIVLTGAPVLAQTQSASAPLIVTATVVSTCKVDAPRSAEASIFATMPVSVSCAKGGTTPRVWRPIAPIAPRRSEVRDAVL
Ga0190271_134382702	3300018481	Soil	AFAQAQSASAPLVVTATVVSTCHVSSPRQAEPARFSTLPVAVTCARGRVTPRVQMPAAPRRSEVRDAVLVINF
Ga0173479_102808412	3300019362	Soil	MVRVALMAVIFTAVAGLAQAQSASAPLIVTATVVSTCQVSSPRQAEPSRFSTLPVAVSCARGRVAPRVQRPAAPRRSEVRDAVLVIDF
Ga0247752_10676932	3300023071	Soil	MVRTVLAAALLTGAPALAWAQEQSAPLFITATVVSTCRVEVPRSAEASTFAIMPVTVTCARGTTPRVQRPIAPRTEVRDALLIIDF
Ga0207681_101421103	3300025923	Switchgrass Rhizosphere	MVRRVLAAAILFCAPALMQAQASSSPLIVTATVVSTCSVDVPRSAEASIFATMPVSVICAKGSAHPRVQRPIMQSRSEVRDAILTIDF
Ga0207681_107988432	3300025923	Switchgrass Rhizosphere	ILAGPSALAHAQSASAPLIVTATVVSTCTVDVPQSAEASTFATMPVVLTCAKRGATPRVQRPIAPRHSEVRDAVLIIDF
Ga0207659_1000036913	3300025926	Miscanthus Rhizosphere	MVRIVLAAAMLSVVPALAQAQSASAPLIVTATVVSTCKVDVPRMVEPSVFTTFPVTMTCARRGTTPRVQRPSAPRRSEVRDAVLIIDF
Ga0207701_112367432	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MPRLSAAAIVAAVLAGVPAFAQEQSAPLFITATVVSTCRVEVPPSALTSTFAIMPVMVTCARGTTPRVQRPIAPAAHIEMRDALLTIDF
Ga0207690_118455572	3300025932	Corn Rhizosphere	ALQSAFVRNVSVAAIVATFLALTPAVAQEQSAPLAVTATVVSTCRIGVPRSAEPSTFATVSISVTCARGITPRVQRPLAPLTEVRDALLIIDF
Ga0207689_102110733	3300025942	Miscanthus Rhizosphere	TVVSTCRVDVPRSAEASTFATMPVAVTCARRGSVPRVQRPTAPRRSRGEVRDAVLVIDF
Ga0207712_103080803	3300025961	Switchgrass Rhizosphere	ATVVSTCTVDVPQSAEASTFATMPVVLTCAKRGATPRVQRPIAPRHSEVRDAVLIIDF
Ga0207640_114193031	3300025981	Corn Rhizosphere	MIRPVLAAALLAGAPALAHGQSASAPLIVTATVVSTCKVDVPRSAEIASFAIMPVGVTCARRGVTPRVQRPIAPHREDRDALLVIDF
Ga0207703_104382103	3300026035	Switchgrass Rhizosphere	AEAASATLLVTATVISTCRVDVPPWAEASAFATMPVAVTCARRGSAPRVQRPIAPRRSRSDVRDAVLTIDF
Ga0207703_120269351	3300026035	Switchgrass Rhizosphere	MVRTVLAAAILVGAPALVRAQSASAPLMVTATVVSTCNVDVPRSAEASTFATMPMTVTCAKGGIRPRVQRPVAPRRSEVRDAVLIIDF
Ga0207708_114717642	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MVRVALMAVIFTAVAGLAQAQSASAPLIVTATVVSTCQVSSPRQAEPSRFSTLPVAVNCARGRVAPRVQRPAAPRRSEVRDAVLVIDF
Ga0207675_1025072852	3300026118	Switchgrass Rhizosphere	MVRVALMAVIFTAVAGLAQAQSASAPLIVTATVVSTCQVSSPRQAEPSRFSTLPVAVSCARGRVAPRVQRPAAPRRSEVRDA
Ga0207675_1026965882	3300026118	Switchgrass Rhizosphere	IVTATVVSSCQVDAPRQAEPSRFSTLRVGVTCARGRVSPRVQRPAAPRRSDVRDAVVVID
Ga0207428_1000010562	3300027907	Populus Rhizosphere	MVRTILAAAIFAGAPALAQTQSVSAPLTVTATVVSTCKVDVPRSAESSTFASMPVTVTCAKGGATPRVQHPNAPIAPRRSEVRDAVLIINF
Ga0268265_110679212	3300028380	Switchgrass Rhizosphere	AGGPALVQAQSASAPLIVTATVVSTCKVEVPRSAEASTFATMPVAVTCATRGTTPRVQRPIAPRRRDVRDAVLIINF
Ga0307506_103746491	3300031366	Soil	VTATVVSTCRVEVPRSAEASSFATMPMTVTCAKGGVTPRVQRPIAPRRSEVRDAVLTINF
Ga0310886_108700241	3300031562	Soil	MVRAVLAVAILAGVGQLAQAQSASAPLIVTATVVSSCQVAAPRQAEPSRFSTLQVGVTCARGRVSPRVQRPAVPRRSEVRDALVVIDF
Ga0310907_106032942	3300031847	Soil	MVRAVLAIAILSGVAGLAQAQSASAPLVVTATVVSSCNVNSPRQVEPSHFSTLPVSVTCARGRVTPRVQRPAAPRRSELRDAVLV
Ga0310904_101510583	3300031854	Soil	MVRIVLAAAILSVVPALVQAQSASAPLIVTATVVSTCKVDVPRMVEPSVFTTFPVTMTCARRGTTPRVQRPSAPRRSEVRDAVLIIDF
Ga0310892_101161472	3300031858	Soil	MRTAPSAAIVAVILAGAAVPQQEQSAPLFVTATVVSTCRVEVPRSAEASTFPTMPVTVTCARGTTPRVQRPIAPRRDVRDALLIIDF
Ga0310900_116914082	3300031908	Soil	LTMVRTVLAAAILAGAPVLAQTQSTSAPLIITATVVSTCKVEVPRSAEASIFATMPVSVSCAKGGTTPQVQRPIAPRRSEVRDAVLIINF
Ga0310885_101028112	3300031943	Soil	MVRAVLAIAILSGVAGLAQAQSASAPLVVTATVVSSCNVNSPRQVEPSHFSTLPVSVTCARGRVTPRVQRPAAPRRSELRDAVLVIDF
Ga0310903_102161552	3300032000	Soil	MLSVVPALAQAQSASAPLIVTATVVSTCKVDVPRMVEPSVFTTFPVTMTCARRGTTPRVQRPSAPRRSEVRDAVLIIDF
Ga0310902_106683322	3300032012	Soil	MVRTVLAAAILAGAPVLAQTQSTSAPLIITATVVSTCKVEVPRSAEASIFATMPVSVSCAKGGTTPQVQRPIAPRRSEVRDAVLIINF
Ga0310899_102432492	3300032017	Soil	AILSGVAGLAQAQSASAPLVVTATVVSSCNVNSPRQVEPSHFSTLPVSVTCARGRVTPRVQRPAAPRRSELRDAVLVIDF
Ga0308173_114778661	3300032074	Soil	FAAALLAGYPVLAHAESASAPLIITATVVSTCNVDVPQSVEASTFTTMPVAVTCAKGSATPRVQRPLPSSAPRRSEVRDAVLTINF
Ga0310895_103505002	3300032122	Soil	GQLAQAQSASAPLIVTATVVSSCQVAAPRQAEPSRFSTLQVGVTCARGRVSPRVQRPAVPRRSEVRDAVLVIDF
Ga0310896_102235152	3300032211	Soil	MKAMFRSIVAAAILAGVPVLAQAQSASAPLVVTATVVSSCNVNSPRQVEPSHFSTLPVSVTCARGRVTPRVQRPAAPRRSELRDAVLVIDF
Ga0310896_102500132	3300032211	Soil	MVRVALMAVIFTAVAGLAQAQSASAPLIVTATVVSTCQVSSPRQAEPSRFSTLPVAVSCARGRVAPRVQRPAAPRRSEVR
Ga0364935_0204647_3_266	3300034151	Sediment	VRTVLAAAILAGAPVLAQTQSTSAPLIITATVVSTCKVEVPRSAEASIFATMPVSVSCAKGGTTPQVQRPIAPRRSEVRDAVLIINF

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F084463

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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