Metagenome / Metatranscriptome Family F084422

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084422
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	82 residues
Representative Sequence	RFTGVHVADELPEPVAGVRALPTADGRCAQIVRAIRAAGWDGTVDVEIFSTPDGFWALPPGDAARRAHAAASSLC
Number of Associated Samples	98
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.80 %
% of genes near scaffold ends (potentially truncated)	96.43 %
% of genes from short scaffolds (< 2000 bps)	88.39 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.214 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (16.964 % of family members)
Environment Ontology (ENVO)	Unclassified (34.821 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.893 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.21% β-sheet: 13.59% Coil/Unstructured: 60.19%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00211	Guanylate_cyc	27.68
PF01464	SLT	6.25
PF01476	LysM	3.57
PF13424	TPR_12	3.57
PF00069	Pkinase	1.79
PF13191	AAA_16	0.89
PF13374	TPR_10	0.89
PF07690	MFS_1	0.89
PF13176	TPR_7	0.89
PF13401	AAA_22	0.89
PF00999	Na_H_Exchanger	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	27.68
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	7.14
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.89
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.89
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.89
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.89
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.21 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.21 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.21 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	73.21 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.79 %
Unclassified	root	N/A	1.79 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	63.39 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.79 %
Unclassified	root	N/A	1.79 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	62.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %
Unclassified	root	N/A	1.79 %
Candidatus Brocadiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	56.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %
Unclassified	root	N/A	1.79 %
unclassified Candidatus Brocadiae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → unclassified Candidatus Brocadiae	0.89 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.89 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	56.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %
Unclassified	root	N/A	1.79 %
Candidatus Brocadiae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → unclassified Candidatus Brocadiae → Candidatus Brocadiae bacterium	0.89 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.89 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	56.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %
Unclassified	root	N/A	1.79 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.89 %
Candidatus Brocadiae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → unclassified Candidatus Brocadiae → Candidatus Brocadiae bacterium	0.89 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	56.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %
Unclassified	root	N/A	1.79 %
Amycolatopsis marina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis marina	0.89 %
Candidatus Brocadiae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → unclassified Candidatus Brocadiae → Candidatus Brocadiae bacterium	0.89 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725002\|GPICC_F5MS3JC01CNMMK	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300000956\|JGI10216J12902_113327716	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300003992\|Ga0055470_10135665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300003993\|Ga0055468_10102125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	809	Open in IMG/M
3300003998\|Ga0055472_10216842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	594	Open in IMG/M
3300004013\|Ga0055465_10361528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300004157\|Ga0062590_101391650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300005168\|Ga0066809_10164284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300005329\|Ga0070683_100124681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2434	Open in IMG/M
3300005331\|Ga0070670_100736820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	888	Open in IMG/M
3300005334\|Ga0068869_100199927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1575	Open in IMG/M
3300005339\|Ga0070660_100618095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	907	Open in IMG/M
3300005438\|Ga0070701_10132625	All Organisms → cellular organisms → Bacteria	1417	Open in IMG/M
3300005440\|Ga0070705_100786219	All Organisms → cellular organisms → Bacteria → Terrabacteria group	756	Open in IMG/M
3300005444\|Ga0070694_101117663	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300005445\|Ga0070708_101271500	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300005459\|Ga0068867_100072087	All Organisms → cellular organisms → Bacteria	2585	Open in IMG/M
3300005466\|Ga0070685_10983034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	632	Open in IMG/M
3300005535\|Ga0070684_101703700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300005544\|Ga0070686_100578531	All Organisms → cellular organisms → Bacteria → Terrabacteria group	882	Open in IMG/M
3300005544\|Ga0070686_101198811	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300005547\|Ga0070693_100716793	All Organisms → cellular organisms → Bacteria → Terrabacteria group	734	Open in IMG/M
3300005577\|Ga0068857_101700629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	617	Open in IMG/M
3300005617\|Ga0068859_102387354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	583	Open in IMG/M
3300005719\|Ga0068861_100104756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2257	Open in IMG/M
3300005841\|Ga0068863_101457108	All Organisms → cellular organisms → Bacteria → Terrabacteria group	693	Open in IMG/M
3300005937\|Ga0081455_11012029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300006038\|Ga0075365_10067667	All Organisms → cellular organisms → Bacteria	2398	Open in IMG/M
3300006051\|Ga0075364_10978668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300006196\|Ga0075422_10361155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	635	Open in IMG/M
3300006575\|Ga0074053_11144589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300006853\|Ga0075420_101954802	All Organisms → cellular organisms → Bacteria → Terrabacteria group	501	Open in IMG/M
3300006880\|Ga0075429_100958444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	748	Open in IMG/M
3300006881\|Ga0068865_100158618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1724	Open in IMG/M
3300009094\|Ga0111539_10094482	All Organisms → cellular organisms → Bacteria	3513	Open in IMG/M
3300009094\|Ga0111539_12257046	All Organisms → cellular organisms → Bacteria → Terrabacteria group	631	Open in IMG/M
3300009156\|Ga0111538_13334809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300009162\|Ga0075423_10688636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1079	Open in IMG/M
3300010047\|Ga0126382_12461676	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300010371\|Ga0134125_12731600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	537	Open in IMG/M
3300010375\|Ga0105239_12260182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300010401\|Ga0134121_11063390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	799	Open in IMG/M
3300011119\|Ga0105246_10379675	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300012507\|Ga0157342_1049338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	588	Open in IMG/M
3300012885\|Ga0157287_1110984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300012897\|Ga0157285_10206334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300012901\|Ga0157288_10156232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300012901\|Ga0157288_10216402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	621	Open in IMG/M
3300012901\|Ga0157288_10217887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	620	Open in IMG/M
3300012902\|Ga0157291_10196597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300012907\|Ga0157283_10401283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis marina	510	Open in IMG/M
3300012910\|Ga0157308_10351079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300012911\|Ga0157301_10104822	All Organisms → cellular organisms → Bacteria → Terrabacteria group	837	Open in IMG/M
3300012914\|Ga0157297_10005673	All Organisms → cellular organisms → Bacteria	2435	Open in IMG/M
3300012914\|Ga0157297_10128029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	800	Open in IMG/M
3300012915\|Ga0157302_10397927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300013104\|Ga0157370_11465605	All Organisms → cellular organisms → Bacteria → Terrabacteria group	614	Open in IMG/M
3300013105\|Ga0157369_10366623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1495	Open in IMG/M
3300013297\|Ga0157378_10572090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1138	Open in IMG/M
3300014263\|Ga0075324_1130763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300014272\|Ga0075327_1229583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300014310\|Ga0075331_1043929	Not Available	998	Open in IMG/M
3300014311\|Ga0075322_1113429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300014325\|Ga0163163_10567698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1197	Open in IMG/M
3300015077\|Ga0173483_10014363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2736	Open in IMG/M
3300015201\|Ga0173478_10030092	All Organisms → cellular organisms → Bacteria	1634	Open in IMG/M
3300015372\|Ga0132256_100801613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1058	Open in IMG/M
3300015372\|Ga0132256_103667283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300015373\|Ga0132257_104364115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300017792\|Ga0163161_10200153	All Organisms → cellular organisms → Bacteria	1539	Open in IMG/M
3300018469\|Ga0190270_10603088	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300019362\|Ga0173479_10539756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300022915\|Ga0247790_10050057	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300022915\|Ga0247790_10101314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	710	Open in IMG/M
3300023266\|Ga0247789_1094486	All Organisms → cellular organisms → Bacteria → Terrabacteria group	590	Open in IMG/M
3300025899\|Ga0207642_10652664	All Organisms → cellular organisms → Bacteria → Terrabacteria group	659	Open in IMG/M
3300025901\|Ga0207688_10033828	All Organisms → cellular organisms → Bacteria	2828	Open in IMG/M
3300025908\|Ga0207643_10053934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2284	Open in IMG/M
3300025912\|Ga0207707_10196638	All Organisms → cellular organisms → Bacteria	1758	Open in IMG/M
3300025912\|Ga0207707_10910134	All Organisms → cellular organisms → Bacteria → Terrabacteria group	727	Open in IMG/M
3300025917\|Ga0207660_10464980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1024	Open in IMG/M
3300025921\|Ga0207652_11104047	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300025927\|Ga0207687_10826399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	791	Open in IMG/M
3300025927\|Ga0207687_11557145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300025932\|Ga0207690_10316637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1225	Open in IMG/M
3300025935\|Ga0207709_10161825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1562	Open in IMG/M
3300025941\|Ga0207711_10567832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1058	Open in IMG/M
3300026095\|Ga0207676_11859759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300026121\|Ga0207683_10060778	All Organisms → cellular organisms → Bacteria → Proteobacteria	3322	Open in IMG/M
3300027401\|Ga0208637_1009816	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300027717\|Ga0209998_10113484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	678	Open in IMG/M
3300027886\|Ga0209486_10209160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1107	Open in IMG/M
3300028587\|Ga0247828_10215480	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300028587\|Ga0247828_10402313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300028592\|Ga0247822_10301665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1225	Open in IMG/M
3300028596\|Ga0247821_10481648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	786	Open in IMG/M
3300028809\|Ga0247824_10068540	All Organisms → cellular organisms → Bacteria	1841	Open in IMG/M
3300030336\|Ga0247826_10179207	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300031547\|Ga0310887_10200240	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → unclassified Candidatus Brocadiae → Candidatus Brocadiae bacterium	1085	Open in IMG/M
3300031547\|Ga0310887_10208668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1067	Open in IMG/M
3300031547\|Ga0310887_10568611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	691	Open in IMG/M
3300031562\|Ga0310886_10254913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	984	Open in IMG/M
3300031908\|Ga0310900_10323681	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300032003\|Ga0310897_10353616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300032012\|Ga0310902_10551195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	759	Open in IMG/M
3300032012\|Ga0310902_10766761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	655	Open in IMG/M
3300032013\|Ga0310906_11225494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300032075\|Ga0310890_10049553	All Organisms → cellular organisms → Bacteria	2394	Open in IMG/M
3300033550\|Ga0247829_10944426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	717	Open in IMG/M
3300033551\|Ga0247830_10048598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2769	Open in IMG/M
3300033551\|Ga0247830_11291203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.39%
Host-Associated	Host-Associated	36.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.82%
Plants	Host-Associated → Plants	36.61%
Aquatic	Environmental → Aquatic	3.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.18%
Marine	Environmental → Aquatic → Marine	3.57%
Roots	Host-Associated → Plants → Roots	2.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.29%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.39%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.46%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.57%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.57%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.89%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.54%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	16.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.46%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.79%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	16.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.18%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.25%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.46%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.57%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	3.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.79%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725002	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003992	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300012885	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014310	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_TuleA_D1	Environmental	Open in IMG/M
3300014311	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027401	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICC_00993100	2067725002	Soil	RDRIVGLHVADELPEPAPGFRALPAPDGHSAAVVALLRAAGWDGTLDVEIFSTPDAFWALPADEAARRAYDALAALGAQTEP
JGI10216J12902_1133277161	3300000956	Soil	RFTGLHVADELPEPVAGVRALPARGGRSAKLIAALRDAGWDGTLDVEIFSTPDAFWALPADEAARQAYAAAVSLG*
Ga0055470_101356651	3300003992	Natural And Restored Wetlands	VLADTYNLAGEDPASLASALGRIAGVHVADELPEPVPGVRTLPEPDGRSAALVDALHGAGWNGTLDVEIFSTPDGFWALPATEAARAAHASVLRLWR*
Ga0055468_101021252	3300003993	Natural And Restored Wetlands	TFNLAHEATQDVVAARDRFTGLHVADELPEPVPGVRALPSAGGRSAELVAALRAAGWEGTLDVEVFSTPDAYWALPVNEAARQAYASAAAL*
Ga0055472_102168422	3300003998	Natural And Restored Wetlands	VGVLADTYNLAGEDPASLASALGRIAGVHVADELPEPVPGVRTLPEPDGRSAALVDALRGAGWNGTLDVEIFSTPDGFWALPATEAARAAHASVLRLWR*
Ga0055465_103615281	3300004013	Natural And Restored Wetlands	IMADTFNLAHEATRDVVAAASRFTGLHVADELPEPTAGVRRLPQADGRSAELVAALRAAGWEGTLDVEVFSTPDAYWALPVNEAARQAYASAAAL*
Ga0062590_1013916501	3300004157	Soil	PAPGVRALPAPDGRSAALVAALRDAGWEGTLDVEIFSTPEAFWALPTDEAARRAHEAVSRL*
Ga0066809_101642842	3300005168	Soil	RASARLTGLHVADELPEPTPGVRGLPGPEGRSAEIVAALRANGWDGTLDVEIFSTPDQFWALPPDEAARRAYAAASALT*
Ga0070683_1001246811	3300005329	Corn Rhizosphere	VRALPTADGRCAQIVRAIRAAGWDGTVDVEIFSTPDGFWALPPGDAARRAHAAASSLC*
Ga0070670_1007368202	3300005331	Switchgrass Rhizosphere	AEELAEPVPGVRAVPEPDGRAAEIVRAVRRAGWDGTLDVEIFSTPDAFWSLPVGEAAQLAYESVAALVEEPE*
Ga0068869_1001999271	3300005334	Miscanthus Rhizosphere	DALALLHDASADDVGIMADAFNLGHETDEALVAAVERFTGVHVADELPEPVAGVRALPTADGRCAQIVRAIRAAGWDGTVDVEIFSTPDGFWALPPGDAARRAHAAASSLC*
Ga0070660_1006180951	3300005339	Corn Rhizosphere	ELAEPVPGVRAVPEPDGRAAEIVRAVRRAGWDGTLDVEIFSTPDAFWSLPVGEAAQLAYESVAALVEEPE*
Ga0070701_101326251	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	PGVRAVPEPDGRSAEIVRALRRVGWDGPLDVEIFSTPDAFWSLPVGEAAQLAYESVAALVEEPE*
Ga0070705_1007862192	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	ALVAAVERFTGVHVADELPEPVAGVRALPTADGRCAQIVRAIRAAGWDGTVDVEIFSTPDGFWALAPGDAARRAHAAASSLC*
Ga0070694_1011176631	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	DTFNLGHEPDDALVRISDRITGLHVADELPQPVPGVRAVPEPDGRSAEIVRALRRVGWDGPLDVEIFSTPDAFWSLPLGEAVQLAYESAAALVEQPR*
Ga0070708_1012715001	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	RAVPEPDGRAAEIVRAVRRAGWDGTLDVEIFSTPDAFWSLPVGEAAQLAYESVAAHVEEPK*
Ga0068867_1000720873	3300005459	Miscanthus Rhizosphere	VADELPEPTPGVRGLPGPEGRSAEIVAALRANGWDGMLDVEIFSTPDQFWALPPDEAARRAYAAASALT*
Ga0070685_109830342	3300005466	Switchgrass Rhizosphere	FNLGHETDKAVVRASARVTGLHVADELPEPTPGVRRLPGPQGRSAEIVAALRANGWDGTLDVEIFSTPDQFWALPPDEAARRAYAAASALT*
Ga0070684_1017037001	3300005535	Corn Rhizosphere	GLHVADELPEPAPGVRALPAPDGRSAALVAALRDAGWEGTLDVEIFSTPDAFWALPADEAARRAHEAVSRL*
Ga0070686_1005785311	3300005544	Switchgrass Rhizosphere	PTADGRCAQIVRAIRAAGWDGTVDVEIFSTPDGFWALPPGDAARRAHAAASSLC*
Ga0070686_1011988112	3300005544	Switchgrass Rhizosphere	PGVRAVPEPDGRSAEIVRALRRVGWDGPLDVEIFSTPDAFWSLPLGEAVQLAYESAAALVEQPR*
Ga0070693_1007167931	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	RFTGVHVADELPEPVAGVRALPTADGRCAQIVRAIRAAGWDGTVDVEIFSTPDGFWALPPGDAARRAHAAASSLC*
Ga0068857_1017006292	3300005577	Corn Rhizosphere	ADELPEPVAGVRAVPEPDGRSAEIVRALRGAGWDGMLDVEIFSTPDAFWSLPVDEAVQRAFESAAALAAQTE*
Ga0068859_1023873541	3300005617	Switchgrass Rhizosphere	LGHETDEAVVRASARLTGLHVADELPEPTPGVRRLPGPQGRSAEIVAALRANGWDGTLDVEIFSTPDQFWALPPDEAARRAYAAASALT*
Ga0068861_1001047561	3300005719	Switchgrass Rhizosphere	RITGLHVAEELAEPVPGVRAVPEPDGRAAEIVRALRRAGWDGTLDVEIFSTPDAFWSLPVGEAAQLAYESIAALVDKHA*
Ga0068863_1014571081	3300005841	Switchgrass Rhizosphere	ERFTGVHVADELPEPVAGVRALPTADGRCAQIVRAIRAAGWDGTVDVEIFSTPDGFWALPPGDAARRAHAAASSLC*
Ga0081455_110120292	3300005937	Tabebuia Heterophylla Rhizosphere	RIVALHVADELPEPAAGVRALPEPAGRSAALVAALREAGWDGTLDVEIFSTPDGFWALPADVAARRAHAAVSQL*
Ga0075365_100676673	3300006038	Populus Endosphere	IVGLHVADELPEPAPGVRALPAPDGRSAALVAALRNAGWEGTLDVEIFSTPDAFWALSPDEAARRAHEAVSRL*
Ga0075364_109786682	3300006051	Populus Endosphere	VPEPDGRAAEIVRAVRRAGWDGTLDVEIFSTPDAFWSLPVGEAAQLAYESIAALVDKHA*
Ga0075422_103611552	3300006196	Populus Rhizosphere	DDALLRIVDRITGLHVAEELAEPVPGVRAVPEPDGRAAEIVRALRRAGWDGTLDVEIFSTPDAFWSLPVGEAAQLAYESIAALVDKHA*
Ga0074053_111445892	3300006575	Soil	AEELPEPVPSVRAVPEPDGRAAEIVRALRRAGWDGTLDVEIFSTPDAFWSLPVGEAVQRAYESAAALVEEPE*
Ga0075420_1019548021	3300006853	Populus Rhizosphere	RFTGLHVADELPDPVAGVRALPARGGRSAELIAALRDAGWDGTLDVEIFSTPDAFWALPADEAARQAYAAAASLG*
Ga0075429_1009584441	3300006880	Populus Rhizosphere	VDTFNLGHESDDAIVRIVDRITGLHVAEELPEPVSSVRAVPEPDGRAAEIVRALRRAGWDGTLDVEIFSTPDAFWSLPVGEAAQLAYESIAALVDKHA*
Ga0068865_1001586181	3300006881	Miscanthus Rhizosphere	TSLADALALLHDASADDVGIMADAFNLGHETDEALVAAVERFTGVHVADELPEPVAGVRALPTADGRCAQIVRAIRAAGWDGTVDVEIFSTPDGFWALPPGDAARRAHAAASSLC*
Ga0111539_100944823	3300009094	Populus Rhizosphere	VDTFNLGHEPDDALLRIVDRITGLHVAEELPEPVPGVRAVPEPDGRAAEIVRALRRAGWDGTLDVEIFSTPDAFWSLPVGEAAQLAYESIAALVDKHA*
Ga0111539_122570462	3300009094	Populus Rhizosphere	GLHVADELPEPQPGVRTLPASDGRSSEIVRAIRAAGWDGTIDVEIFSTPDGFWALPPGDAARRAHAAASSLC*
Ga0111538_133348092	3300009156	Populus Rhizosphere	RFTGVHVADELPEPVPRVRALPGPDGRSAEIVRAIRAVGWEGTLDVEIFSTPDAFWALSPDEAARRAHEAVSRL*
Ga0075423_106886361	3300009162	Populus Rhizosphere	GIMADTFNLAHESTEDVVAARSRFTGLHVADELPEPIPGVRRLPEDHGRSSELVAALCAAGWDGPLDVEVFSTPDAFWALPVDEAARQAHSAVSALA*
Ga0126382_124616762	3300010047	Tropical Forest Soil	PEPAGGVRTLPEADGPSAAMVDALRRAGWDGTLDVEIFSTPDAFWALAPRDAARDAYASASRLRA*
Ga0134125_127316001	3300010371	Terrestrial Soil	DGLPEPVAGVRTLPESDGRSSEIVRTIRAAGWDGTVDVEIFSTPDGFWALPPGDAARRAHAAASSLC*
Ga0105239_122601821	3300010375	Corn Rhizosphere	EPAPGVRALPAPDGRSAALVGALRDAGWEGTLDVEIFSTPEAFWALPTDEAARRAHEAVSRL*
Ga0134121_110633901	3300010401	Terrestrial Soil	IMVDTFNLGHEPDDALLRIVDRITGLHVAEELAEPVPGVRAVPEPDGRAAEIVRVLRRAGWDGTLDVEIFSTPDAFWSLPVGEAAQLAYESVAALVEEPE*
Ga0105246_103796753	3300011119	Miscanthus Rhizosphere	VDRITGLHVAEELPEPVPGVRAVPEPDGRAAEIVRALRRAGWDGTLDVEIFSTPDAFWSLPVGEAAQLAYESIAALVDKHA*
Ga0157342_10493381	3300012507	Arabidopsis Rhizosphere	VPGVRALPAPEGRSATLVDTLRQAGWDGTLDVEIFSTPDAFWSLPPVEAARQAYASASAL
Ga0157287_11109841	3300012885	Soil	ADDVGIMADAFNLGHETDEALVAAVERFTGVHVADELPEPVAGVRALPTADGRCAQIVRAIRAAGWDGTVDVEIFSTPDGFWALPPGDAARRAHAAASSLC*
Ga0157285_102063341	3300012897	Soil	HEDPAALAAARDRIVGLHVADELPEPAPGVRALPAPDGRSAALVGALRDAGWEGTLDVEIFSTPEAFWALPTDEAARRAHEAVSRL*
Ga0157288_101562321	3300012901	Soil	ASADDVGIMADAFNLGHETDEALVAAVERFTGVHVADELPEPVAGVRALPTADGRCAQIVRAIRAAGWDGTVDVEIFSTPDGFWALPPGDAARRAHAAASSLC*
Ga0157288_102164021	3300012901	Soil	PEPDGRAAEIVRAVRRAGWDGTLDVEIFSTPDAFWSLPVDEAVQRAFESAAALAAQAE*
Ga0157288_102178871	3300012901	Soil	LGHETNEALMTAAPRFTGVHVADEPPEPAPGVRALPRPGGRSAEIVSALRAAGWDGTLDVEIFSTPDAFWSLPVDEAASLAYASVAELV*
Ga0157291_101965972	3300012902	Soil	VHVADELPDPMPGVRALPAPEGRSATLVDTLRQAGWDGTLDVEIFSTPDAFCALPADEAARRAYGALAALGAQTEP*
Ga0157283_104012831	3300012907	Soil	GVRLGFEPIHPAQRDTAGFVTSLADAVELLDEAEADDVGIMADTFNLGHESNEALVAALDRFTGVHVADELPEPQPGVRTLPASDGRSSEIVRAIRAAGWDGTIDVEIFSTPDGFWALPPGDAARRAHAAASSLC*
Ga0157308_103510791	3300012910	Soil	AGFVTSLADALALLHDASADDVGIMADAFNLGHETDEALVAAVERFTGVHVADELPEPVAGVRSLPTADGRSAQIVRAIRAAGWDGTVDVEIFSTPDGFWALPPGDAARRAHAAASSLC*
Ga0157301_101048221	3300012911	Soil	TDEALVAAAERFTGVHVADELPEPVAGVRSLPTADGRCAQIVRAIRAAGWDGTVDVEIFSTPDGFWALPPGDAARRAHAAASSLC*
Ga0157297_100056731	3300012914	Soil	GHESNEALVAALDRFTGVHVADELPEPQPGVRTLPASDGRSSEIVRAIRAAGWDGTIDVEIFSTPDGFWALPPGDAARRAHAAASSLC*
Ga0157297_101280291	3300012914	Soil	NEALMTAVPRFTGVHVADALPEPAPGVRALPGPGGRSAEIVSALHAAGWDGTLDVEIFSTPDAFWSLPVDEAASLAYASVAELV*
Ga0157302_103979272	3300012915	Soil	VRIVDRITGLHVADELPEPVAGVRAVPEPDGRSAEIVRALRGAGWDGTLDVEIFSTPDAFWSLPVDEAVRLAYASAAALAEATE*
Ga0157370_114656051	3300013104	Corn Rhizosphere	EQPEPVAGVRALPTADGRCAQIVRAIRAAGWDGTVDVEIFSTPDGFWALPPGDAARRAHAAASSLC*
Ga0157369_103666231	3300013105	Corn Rhizosphere	ADGRSAQIVRAIRAAGWDGTVDVEIFSTPDGFWALPPGDAARRAHAAASSLC*
Ga0157378_105720902	3300013297	Miscanthus Rhizosphere	DTFNLGHETDEAVVRASARLTGLHVADELPEPTPGVRRLPGPQGRSAEIVAALRANGWDGTLDVEIFSTPDQFWALPPDEAARRAYAAASALT*
Ga0075324_11307631	3300014263	Natural And Restored Wetlands	ESNADVVAARSRFTGLHVADEPPEPVPGVRVLPEDGRGRSAELVAALRATGWDGTLDVEIFSTPDAFWSLPASEAARLAHAAAATLARAG*
Ga0075327_12295831	3300014272	Natural And Restored Wetlands	RRFTGLHVADELPEPVPGVRALPGPAGRSAELVAALRDAGWDGTLDVEIFSTPDAFWAIRADEAARRAYAAVSELV*
Ga0075331_10439291	3300014310	Natural And Restored Wetlands	NLVNETTADVVAAARRFTGLHVADELPEPVPGVRALPGPTGRSAELVAALRDAGWDGTLDVEIFSTPGAFWALRADEAARRAYAAVSELV*
Ga0075322_11134291	3300014311	Natural And Restored Wetlands	VADALPEPAPGVRALPRPGGRSAEIVSALRAAGWDGTLDVEIFSTPDAFWSLPVDEAASLAYASVAELV*
Ga0163163_105676981	3300014325	Switchgrass Rhizosphere	TDEALVAAVERFTGVHVADELPEPVAGVRALPTADGRSAQIVRAIRAAGWDGTVDVEIFSTPDGFWALPPGDAARRAHAAASSLC*
Ga0173483_100143631	3300015077	Soil	NLGHETDEALVAAAERFTGVHVADELPEPVAGVRALPTADGRCAQIVRAIRAAGWDGTVDVEIFSTPDGFWALPPGDAARRAHAAASSLC*
Ga0173478_100300921	3300015201	Soil	GLHVADELPEPVAGVRAVPEPDGRSAEIVRALRGAGWDGTLDVEIFSTPDAFWSLPVDEAVQRAFESAAALAAQTE*
Ga0132256_1008016131	3300015372	Arabidopsis Rhizosphere	VGIMADAFNLGYEDDDAIVAAAPRFTGLHVADELPEPVAGVRAVPTANGRSAEIVRAIRAAGWDGTLDVEVFSTPDGFWSLSADDAARAAYASVAPLAESSE*
Ga0132256_1036672831	3300015372	Arabidopsis Rhizosphere	PGVRTLPASDGRSSEIVRAIRAAGWDGTIDVEIFSTPDGFWALPPGDAARRAHAAASALY
Ga0132257_1043641151	3300015373	Arabidopsis Rhizosphere	DDAIVAAAPRFTGLHVADELPEPVAGVRAVPTANGRSAEIVRAIRAAGWDGTLDVEVFSTPDGFWSLSADDAARAAYASVAPLAESSE*
Ga0163161_102001531	3300017792	Switchgrass Rhizosphere	MVDTFNLGHEPDDALLRIVDRITGLHVAEELAEPVPGVRAVPEPDGRAAEIVRVLRRASWDGTLDVEIFSTPDAFWSLPVGEAAQLAYESVAALVEEPE
Ga0190275_123214692	3300018432	Soil	AEAAREGHVPGVRVLPGEGDGSAGRVVLALRRAGWDGTLDVEIFSTPDAFWSLPVAEAARRAHAAAATLAQ
Ga0190270_106030881	3300018469	Soil	ELVAAAGRLTGLHVADELPEPAPGVRALPEGGGRSAELIAALRDAGWDGTLDVEIFSTPDAFWALPVDEAARRAYAASSALS
Ga0173479_105397562	3300019362	Soil	ADDVGIMADAFNLGHETDEALVAAVERFTGVHVADELPEPVAGVRALPTADGRCAQIVRAIRAAGWDGTVDVEIFSTPDGFWALAPGDAARRAHAAASSLC
Ga0247790_100500571	3300022915	Soil	PDGRSAEIVRALRGAGWDGTLDVEIFSTPDAFWSLPVDEAVQRAFESAAALAAQTE
Ga0247790_101013141	3300022915	Soil	GIMADAFNLGHETDEALVAAVERFTGVHVADELPEPVAGVRALPTADGRCAQIVRAIRAAGWDGTVDVEIFSTPDGFWALPPGDAARRAHAAASSLC
Ga0247789_10944861	3300023266	Soil	GVRALPTADGRCAQIVRAIRAAGWDGTVDVEIFSTPDGFWALPPGDAARRAHAAASSLC
Ga0207642_106526642	3300025899	Miscanthus Rhizosphere	LPEPVAGVRALPTADGRSAQIVRAIRAAGWDGTVDVEIFSTPDGFWALAPGDAARRAHAAASSLC
Ga0207688_100338283	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	RAVPEPDGRSAEIVRALRRAGWDGTLDVEIFSTPDAFWSLPVGEAAQLAYESVAALVEEP
Ga0207643_100539343	3300025908	Miscanthus Rhizosphere	DGAGIMADTFNLGHETDEAVVRASARLTGLHVADELPEPTPGVRRLPGPQGRSAEIVAALRANGWDGTLDVEIFSTPDQFWALPPDEAARRAYAAASALT
Ga0207707_101966383	3300025912	Corn Rhizosphere	GAADAGIMVDTFNLGHESDDAIVRIVDRITGLHVAEELPEPVPGVRAVPEPDGRAAEIVRALRRAGWDGTLDVEIFSTPDAFWSLPVGEAAQLAYESIAALVDKHA
Ga0207707_109101341	3300025912	Corn Rhizosphere	VADELPEPVAGVRALPTADGRCAQIVRAIRAAGWDGTVDVEIFSTPDGFWALPPGDAARRAHAAASSLC
Ga0207660_104649802	3300025917	Corn Rhizosphere	DEQPEPVAGVRALPTADGRSAQIVRAIRAAGWDGTVDVEIFSTPDGFWALPPGDAARRAHAAASSLC
Ga0207652_111040471	3300025921	Corn Rhizosphere	DRIAGLHVADELPEPVAGVRAVPEPDGRSAEIVRALRGAGWDGMLDVEIFSTPDAFWSLPVDEAVQRAFESAAALAAQAE
Ga0207687_108263992	3300025927	Miscanthus Rhizosphere	ALVRISDRITGLHVADELPQPVPGVRAVPEPDGRSAEIVRALRGAGWDGTLDVEVFSTPDAFWSLPVDEAVRLAYASAAALAEATE
Ga0207687_115571452	3300025927	Miscanthus Rhizosphere	DEAVVRASARLTGLHVADELPEPTPGVRRLPGPQGRSAEIVAALRANGWDGTLDVEIFSTPDQFWALPPDEAARRAYAAASALT
Ga0207690_103166372	3300025932	Corn Rhizosphere	AQRDTAGFVTSLADALALLHDASADDVGIMADAFNLGHETDEALVAAVERFTGVHVADELPEPVAGVRALPTADGRCAQIVRAIRAAGWDGTVDVEIFSTPDGFWALPPGDAARRAHAAASSLC
Ga0207709_101618251	3300025935	Miscanthus Rhizosphere	GFVTSLADALALLHDASADDVGIMADAFNLGHETDEALVAAVERFTGVHVADELPEPVAGVRALPTADGRCAQIVRAIRAAGWDGTVDVEIFSTPDGFWALPPGDAARRAHAAASSLC
Ga0207711_105678322	3300025941	Switchgrass Rhizosphere	GFVTSLADALALLHDASADDVGIMADAFNLGHETDEALVAAVERFTGVHVADELPEPVAGVRSLPTADGRCAQIVRAIRAAGWDGTVDVEIFSTPDGFWALPPGDAARRAHAAASSLC
Ga0207676_118597591	3300026095	Switchgrass Rhizosphere	VGIMADAFNLGHETDEALVAAVERFTGVHVADELPEPVAGVRALPTADGRCAQIVRAIRAAGWDGTVDVEIFSTPDGFWALAPGDAARRAHAAASSLC
Ga0207683_100607781	3300026121	Miscanthus Rhizosphere	DTYNLVHEDPAALAAARERIVGLHVADELPEPAPGVRALPAPDGRSAALVAALRDAGWEGTLDVEIFSTPDAFWALSPDEAARRAHEAVSRL
Ga0208637_10098162	3300027401	Soil	MDHQVTGLHVADELPEPVPGVRAVPEPDRRAAEIVRALRRAGWDGTLDVEIFSTPDAFWSLPVGEAVQRAYESAAALVEEPE
Ga0209998_101134841	3300027717	Arabidopsis Thaliana Rhizosphere	PGVRALPRPGGRSAEIVSALRAAGWDGTLDVEIFSTPDAFWSLPVDEAASLAYASVAELV
Ga0209486_102091602	3300027886	Agricultural Soil	DEEGMDDVGIMADTFNLASERTTDVVAAASRFTGLHVADELPEPVAGVRTLPESRGRSAALVAALRDAGWDGTLDVEIFSTPDAFWSLPPDEAARRAFAAINRLSPST
Ga0247828_102154801	3300028587	Soil	GRLTGLHVADELPEPVPGVRALPERDGRSAELIAALRDAGWDGTLDVEIFSTPDAFWALPAEEAARRAFAASSALG
Ga0247828_104023132	3300028587	Soil	LHVAEELPEPVPGVRAVPEPDGRAAEIVRVLRRAGWDGTLDVEIFSTPDAFWLLPVGKAAQLAYESVAALVEEPE
Ga0247822_103016653	3300028592	Soil	NLGHVATDELAAGAGRLTGLHVADELPEPVPGVRALPERDGRSAELIAALRDAGWDGTLDVEIFSTPDAFWALPAEEAARRAFAASSALG
Ga0247821_104816482	3300028596	Soil	DALLRIVDRITGLHVAEELAEPVPGVRAVPEPDGRAAEIVRVLRRAGWDGTLDVEIFSTPDAFWSLPVGEAAQLAYESVAALVEEPE
Ga0247824_100685401	3300028809	Soil	LRIVDRITGLHVAEELPEPVPGVRAVPEPDGRAAEIVRALRRAGWDGTLDVEIFSTPDAFWSLPVGEAAQLAYESIAALVDKHA
Ga0247826_101792071	3300030336	Soil	ADTFNLGHEATDEVVAAAARFTGLHVADELPEPVAGVRALPARGGRSAELIAALRDAGWDGTLDVEIFSTPDAFWALPADEAARQAYAAAASLC
Ga0310887_102002401	3300031547	Soil	DGRAAEIVRALRRAGWDGTLDVEIFSTPDAFWSLPVGEAAQLAYESVAALVEEPE
Ga0310887_102086681	3300031547	Soil	VADELPEPVAGIRVLPARGGRSAELIAALREAGWDGTLDVEIFSTPDAFWALPADEAARQAYAAAASLG
Ga0310887_105686111	3300031547	Soil	IMADTYNLAHERTGDVVAAVSRFSGLHVADELAAHVPGVRALPDARGRSAELVAALRAAGWDGTLDVEIFSTPDAFWSLPPVEAARQAYASASAL
Ga0310886_102549132	3300031562	Soil	ELPEPVSSVRAVPEPDGRAAEIVRALRRAGWDGTLDVEIFSTPDAFWSLPVGEAVQRAYESAAALVEEPE
Ga0310900_103236812	3300031908	Soil	DELAAHVPGVRALPDARGRSAELVAALRAAGWDGTLDVEIFSTPDAFWSLPPVEAARQAYASASAL
Ga0310897_103536162	3300032003	Soil	PEPVPGVRAVPEPDGRAAEIVRALRRAGWDGTLDVEIFSTPDAFWSLPVGEAAQLAYESVAALVEEPE
Ga0310902_105511952	3300032012	Soil	EAAGVDDVGVMADTYNLAHERTGDVVAAVSRFSGLHVADELAAHVPGVRALPDARGRSAELVAALRAAGWDGTLDVEIFSTPDAFWSLPPVEAARQAYASASAL
Ga0310902_107667611	3300032012	Soil	IMADTFNLGHETDEAVVRASARLTGLHVADELPEPTPGVRGLPGPEGRSAEIVAALRANGWTGTLDVEIFSTPDQFWALPPDEAARRAYAAASALT
Ga0310906_112254941	3300032013	Soil	EPVPGVRALPEPGGRSAELIAALRNAGWDGTLDIEIFSTPDAFWSLPVEEAARRAYAASSALS
Ga0310890_100495533	3300032075	Soil	VAEELAEPVPGVRAVPEPDGRAAEIVRVLRRAGWDGTLDVEIFSTPDAFWSLPVGEAAQLAYESIAALVDKHA
Ga0247829_109444261	3300033550	Soil	LMADTFNLGHEATDDVVAAAARFTGLHVADELPEPVAGIRVLPARGGRSAELIAALREAGWDGTLDVEIFSTPDAFWALPADEAARQAYAAAASLG
Ga0247830_100485981	3300033551	Soil	VPAGRAKELVAAIRAAGWDGTLDVEVFSTPESFWSLPVDEAATRAYAAAAALAQPS
Ga0247830_112912031	3300033551	Soil	TDEAVVRASARLTGLHVADELPEPTPGVRRLPGPQGRSAEIVAALRANGWDGTLDVEIFSTPDQFWALPPDEAARRAYAAASALT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084422

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences