NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F084374

Metagenome / Metatranscriptome Family F084374

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F084374
Family Type Metagenome / Metatranscriptome
Number of Sequences 112
Average Sequence Length 67 residues
Representative Sequence PDAARPVPFFNGSVDAVRSTSFDVVVANINEDVMGPMRADFERVARKRILSGFQDDHGEWTCVVL
Number of Associated Samples 100
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.89 %
% of genes near scaffold ends (potentially truncated) 98.21 %
% of genes from short scaffolds (< 2000 bps) 94.64 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (92.857 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere
(6.250 % of family members)
Environment Ontology (ENVO) Unclassified
(40.179 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(49.107 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 15.05%    β-sheet: 17.20%    Coil/Unstructured: 67.74%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF08482HrpB_C 44.64
PF01904DUF72 18.75
PF01019G_glu_transpept 3.57
PF03129HGTP_anticodon 2.68
PF02687FtsX 1.79
PF03447NAD_binding_3 0.89
PF14378PAP2_3 0.89
PF01227GTP_cyclohydroI 0.89
PF08308PEGA 0.89
PF13533Biotin_lipoyl_2 0.89
PF01797Y1_Tnp 0.89
PF07589PEP-CTERM 0.89
PF13857Ank_5 0.89
PF06325PrmA 0.89
PF13673Acetyltransf_10 0.89
PF07690MFS_1 0.89
PF05193Peptidase_M16_C 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG1643HrpA-like RNA helicaseTranslation, ribosomal structure and biogenesis [J] 44.64
COG1801Sugar isomerase-related protein YecE, UPF0759/DUF72 familyGeneral function prediction only [R] 18.75
COG0405Gamma-glutamyltranspeptidaseAmino acid transport and metabolism [E] 3.57
COG0124Histidyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 2.68
COG0423Glycyl-tRNA synthetase, class IITranslation, ribosomal structure and biogenesis [J] 2.68
COG0441Threonyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 2.68
COG0442Prolyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 2.68
COG1943REP element-mobilizing transposase RayTMobilome: prophages, transposons [X] 0.89
COG2264Ribosomal protein L11 methylase PrmATranslation, ribosomal structure and biogenesis [J] 0.89
COG2890Methylase of polypeptide chain release factorsTranslation, ribosomal structure and biogenesis [J] 0.89
COG3897Protein N-terminal and lysine N-methylase, NNT1/EFM7 familyPosttranslational modification, protein turnover, chaperones [O] 0.89

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.86 %
UnclassifiedrootN/A7.14 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_105044712All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300001851|RCM31_10379077All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus831Open in IMG/M
3300005093|Ga0062594_101207126All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300005329|Ga0070683_100797462All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4905Open in IMG/M
3300005332|Ga0066388_105992879All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300005336|Ga0070680_100563392All Organisms → cellular organisms → Bacteria977Open in IMG/M
3300005338|Ga0068868_101531669All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300005340|Ga0070689_102065873All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300005437|Ga0070710_11169278All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300005439|Ga0070711_100248830All Organisms → cellular organisms → Bacteria → Acidobacteria1393Open in IMG/M
3300005447|Ga0066689_10299973All Organisms → cellular organisms → Bacteria → Acidobacteria996Open in IMG/M
3300005456|Ga0070678_101444687All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300005534|Ga0070735_10591239All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300005537|Ga0070730_10991581All Organisms → cellular organisms → Bacteria → Acidobacteria524Open in IMG/M
3300005541|Ga0070733_10115162All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus1725Open in IMG/M
3300005544|Ga0070686_100171134All Organisms → cellular organisms → Bacteria1536Open in IMG/M
3300005545|Ga0070695_100442329All Organisms → cellular organisms → Bacteria → Acidobacteria994Open in IMG/M
3300005549|Ga0070704_102056488All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300005564|Ga0070664_100683376All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4955Open in IMG/M
3300005578|Ga0068854_101443436All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300005591|Ga0070761_10272521All Organisms → cellular organisms → Bacteria → Acidobacteria1014Open in IMG/M
3300005616|Ga0068852_102419238All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300005617|Ga0068859_103136065Not Available504Open in IMG/M
3300005618|Ga0068864_100762476All Organisms → cellular organisms → Bacteria949Open in IMG/M
3300005842|Ga0068858_100750681All Organisms → cellular organisms → Bacteria → Acidobacteria951Open in IMG/M
3300005842|Ga0068858_102317554All Organisms → cellular organisms → Bacteria → Acidobacteria531Open in IMG/M
3300005843|Ga0068860_102224780All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4569Open in IMG/M
3300005950|Ga0066787_10125494All Organisms → cellular organisms → Bacteria → Acidobacteria565Open in IMG/M
3300006059|Ga0075017_100986480All Organisms → cellular organisms → Bacteria → Acidobacteria656Open in IMG/M
3300006162|Ga0075030_101311666All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300006237|Ga0097621_101051741All Organisms → cellular organisms → Bacteria → Acidobacteria763Open in IMG/M
3300006237|Ga0097621_101560994All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300006354|Ga0075021_10048590All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus2449Open in IMG/M
3300006354|Ga0075021_10245329All Organisms → cellular organisms → Bacteria1101Open in IMG/M
3300006638|Ga0075522_10090803All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus1671Open in IMG/M
3300006804|Ga0079221_10530383All Organisms → cellular organisms → Bacteria → Acidobacteria773Open in IMG/M
3300006881|Ga0068865_100736191All Organisms → cellular organisms → Bacteria846Open in IMG/M
3300009093|Ga0105240_10926353All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4936Open in IMG/M
3300009148|Ga0105243_11448699All Organisms → cellular organisms → Bacteria → Acidobacteria709Open in IMG/M
3300009174|Ga0105241_10402375All Organisms → cellular organisms → Bacteria → Acidobacteria1201Open in IMG/M
3300009176|Ga0105242_10077373All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus2775Open in IMG/M
3300009176|Ga0105242_10435967All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-41232Open in IMG/M
3300009176|Ga0105242_11646138All Organisms → cellular organisms → Bacteria → Acidobacteria677Open in IMG/M
3300009176|Ga0105242_11735644All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4661Open in IMG/M
3300009177|Ga0105248_10155774All Organisms → cellular organisms → Bacteria → Acidobacteria2578Open in IMG/M
3300009218|Ga0103848_1009207All Organisms → cellular organisms → Bacteria1735Open in IMG/M
3300009257|Ga0103869_10034950All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia1080Open in IMG/M
3300009551|Ga0105238_11119137All Organisms → cellular organisms → Bacteria → Acidobacteria811Open in IMG/M
3300010046|Ga0126384_12143463Not Available537Open in IMG/M
3300010341|Ga0074045_10984342All Organisms → cellular organisms → Bacteria → Acidobacteria531Open in IMG/M
3300010366|Ga0126379_10970613All Organisms → cellular organisms → Bacteria → Acidobacteria954Open in IMG/M
3300010366|Ga0126379_13824682All Organisms → cellular organisms → Bacteria → Acidobacteria504Open in IMG/M
3300010373|Ga0134128_12985727All Organisms → cellular organisms → Bacteria → Acidobacteria520Open in IMG/M
3300010375|Ga0105239_13310394Not Available524Open in IMG/M
3300010376|Ga0126381_104076572Not Available568Open in IMG/M
3300010379|Ga0136449_101678405All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4959Open in IMG/M
3300010397|Ga0134124_11835129Not Available641Open in IMG/M
3300010400|Ga0134122_11350768All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4723Open in IMG/M
3300010401|Ga0134121_12024869All Organisms → cellular organisms → Bacteria → Acidobacteria609Open in IMG/M
3300012019|Ga0120139_1205440All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300012189|Ga0137388_10418106All Organisms → cellular organisms → Bacteria → Acidobacteria1242Open in IMG/M
3300012931|Ga0153915_10485168All Organisms → cellular organisms → Bacteria → Acidobacteria1411Open in IMG/M
3300013308|Ga0157375_12543147All Organisms → cellular organisms → Bacteria → Acidobacteria611Open in IMG/M
3300014162|Ga0181538_10240000All Organisms → cellular organisms → Bacteria → Acidobacteria1002Open in IMG/M
3300014200|Ga0181526_10062286All Organisms → cellular organisms → Bacteria2378Open in IMG/M
3300014325|Ga0163163_10256068All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1801Open in IMG/M
3300014745|Ga0157377_10772477All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300014838|Ga0182030_11141251All Organisms → cellular organisms → Bacteria → Acidobacteria671Open in IMG/M
3300014968|Ga0157379_11060525All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4775Open in IMG/M
3300016341|Ga0182035_10920706All Organisms → cellular organisms → Bacteria → Acidobacteria772Open in IMG/M
3300016404|Ga0182037_11200508All Organisms → cellular organisms → Bacteria → Acidobacteria666Open in IMG/M
3300017972|Ga0187781_10088102All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus2147Open in IMG/M
3300018044|Ga0187890_10071683All Organisms → cellular organisms → Bacteria2036Open in IMG/M
3300021407|Ga0210383_10298268All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1386Open in IMG/M
3300021407|Ga0210383_10876343All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300021559|Ga0210409_10254379All Organisms → cellular organisms → Bacteria → Acidobacteria1590Open in IMG/M
3300021861|Ga0213853_11321673All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4768Open in IMG/M
3300022724|Ga0242665_10104333All Organisms → cellular organisms → Bacteria → Acidobacteria845Open in IMG/M
3300025862|Ga0209483_1064827All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter1676Open in IMG/M
3300025911|Ga0207654_10150457All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1493Open in IMG/M
3300025913|Ga0207695_11270242All Organisms → cellular organisms → Bacteria → Acidobacteria617Open in IMG/M
3300025913|Ga0207695_11372872All Organisms → cellular organisms → Bacteria → Acidobacteria587Open in IMG/M
3300025916|Ga0207663_10238048All Organisms → cellular organisms → Bacteria → Acidobacteria1333Open in IMG/M
3300025918|Ga0207662_10750004All Organisms → cellular organisms → Bacteria → Acidobacteria686Open in IMG/M
3300025928|Ga0207700_10704739All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4901Open in IMG/M
3300025930|Ga0207701_11183856All Organisms → cellular organisms → Bacteria → Acidobacteria631Open in IMG/M
3300025934|Ga0207686_10799616All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300025935|Ga0207709_11344831All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4591Open in IMG/M
3300025936|Ga0207670_10121711All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1898Open in IMG/M
3300025936|Ga0207670_10284016All Organisms → cellular organisms → Bacteria → Acidobacteria1291Open in IMG/M
3300025941|Ga0207711_11716039All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium 12-62-4571Open in IMG/M
3300025945|Ga0207679_11373249All Organisms → cellular organisms → Bacteria → Acidobacteria648Open in IMG/M
3300025981|Ga0207640_11957565All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300026023|Ga0207677_11060019All Organisms → cellular organisms → Bacteria → Acidobacteria737Open in IMG/M
3300026023|Ga0207677_11795707All Organisms → cellular organisms → Bacteria → Acidobacteria569Open in IMG/M
3300026041|Ga0207639_12281229All Organisms → cellular organisms → Bacteria → Acidobacteria503Open in IMG/M
3300026078|Ga0207702_10234290All Organisms → cellular organisms → Bacteria1717Open in IMG/M
3300026142|Ga0207698_11419212All Organisms → cellular organisms → Bacteria → Acidobacteria709Open in IMG/M
3300027894|Ga0209068_10248119All Organisms → cellular organisms → Bacteria989Open in IMG/M
3300027915|Ga0209069_10347013Not Available800Open in IMG/M
3300028906|Ga0308309_11707539All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300029636|Ga0222749_10557648All Organisms → cellular organisms → Bacteria → Acidobacteria624Open in IMG/M
3300031708|Ga0310686_101081715All Organisms → cellular organisms → Bacteria → Acidobacteria986Open in IMG/M
3300031708|Ga0310686_119919510All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300031718|Ga0307474_10286404Not Available1267Open in IMG/M
3300031754|Ga0307475_11346904All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300031820|Ga0307473_10506627All Organisms → cellular organisms → Bacteria816Open in IMG/M
3300032001|Ga0306922_10632795All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1131Open in IMG/M
3300032180|Ga0307471_103730544All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300032783|Ga0335079_10743818All Organisms → cellular organisms → Bacteria1020Open in IMG/M
3300032895|Ga0335074_11263858Not Available614Open in IMG/M
3300033412|Ga0310810_10844744All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium817Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere6.25%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere6.25%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds5.36%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.36%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere5.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.46%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere4.46%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.46%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.57%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.57%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.57%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.68%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.68%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.79%
River WaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water1.79%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.79%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.79%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.79%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.79%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.79%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.89%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.89%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.89%
Marine PlanktonEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton0.89%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.89%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.89%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.89%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.89%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.89%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.89%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.89%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.89%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.89%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.89%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001851Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM31, ROCA_DNA206_0.2um_MCP-S_C_3bEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005950Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006638Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-AEnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009218Microbial communities of water from Amazon river, Brazil - RCM1EnvironmentalOpen in IMG/M
3300009257Microbial communities of water from Amazon river, Brazil - RCM22EnvironmentalOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010341Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012019Permafrost microbial communities from Nunavut, Canada - A7_5cm_12MEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014162Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaGEnvironmentalOpen in IMG/M
3300014200Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaGEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018044Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10EnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025862Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10504471223300000364SoilVVACDIDSTAAREALFYVGSVDAVRSGAFDVVVANISDVVIGDLKAEFERVAPRRILSGFQDARGEWTCITR*
RCM31_1037907723300001851Marine PlanktonQAALLLGAKRVVACDIEEDSAHVVPFFQGSVDAVKSNSFDVVVANISEDVVGVLYPDLARIAPVRILSGFQDEAGQWTCVVR*
Ga0062594_10120712623300005093SoilDAAGPASFFVGSVDAVRSDAFDVVVANINEDVMGPMLPDFVRVARKRILSGFQGDAGDWTCVIL*
Ga0070683_10079746213300005329Corn RhizospherePDAAGPECFFVGSVDAVRSGTFDVVVANINEDVIGSMRADFERVARVRILSGFQNDDGEWTCVTI*
Ga0066388_10599287923300005332Tropical Forest SoilGRVIACDLDPDAAKPVPFFVGSADAVRAEAFDVVVANISEDVLGSLRPDLERVAQTRILSGFQNESGEWTCIVV*
Ga0070680_10056339213300005336Corn RhizosphereAAREALFFVGSVDAVRSGAFDVVVANISEVVIGDLKAEFERVAPRRILSGFQDARGEWTCVTR*
Ga0068868_10153166913300005338Miscanthus RhizosphereDAARPVPFFVGSVDAVGSNTFDVVVANINEDVVGSMRADFERVAPKRILSGFQDEDGDWTCVLI*
Ga0070689_10206587313300005340Switchgrass RhizosphereQGSVDAVRSGSFDVVVANINEDVIGSMFSDFERVAKTRVLSGFQDDNGEWTCVIR*
Ga0070710_1116927823300005437Corn, Switchgrass And Miscanthus RhizosphereLGAATVVACDIDPDAAREAAFFIGSVDAVRSGAFDVVVANISEIVIGELKPELERVAPRRILSGFQDYRGEWTCVVE*
Ga0070711_10024883013300005439Corn, Switchgrass And Miscanthus RhizosphereVSCDIDPDAAGPESFFIGSVDAVRSGAFDVVVANINEDVIGPMRADFERVARVRILSGFQNEAGDWDCVVV*
Ga0066689_1029997323300005447SoilFFIGSADAVRTGAFDVVVANINEDVLGPMRADLERVAPRRILSGFQDEEGDWTCLVC*
Ga0070678_10144468723300005456Miscanthus RhizosphereACDIDPDALRPVPFFVGSVDAVRSNTFDLVVANINEDVLGSMRADFERVAPKRILSGFQDDDNEWTCVVI*
Ga0070735_1059123923300005534Surface SoilAFFIGSVDAVATNAFDVVIANISEIVIGELKPEFDRVAPKRILSGFQDAAGEWTCVVE*
Ga0070730_1099158113300005537Surface SoilCDIDPDAAGPESFFIGSIDAVRSGSFDVVVANINEDVMGPMRADFERVARTRILSGFQNEAGEWDCVVL*
Ga0070733_1011516233300005541Surface SoilKVTSFFVGSADAVRSGSFDVVVANISEAVMGEMRAELERVAPKRILSGFQDERGEWACVVC*
Ga0070686_10017113423300005544Switchgrass RhizospherePFFVGSVDAVRSNTFDLVVANINEDVLGSMRADFERVAPKRILSGFQDDDNEWTCVVI*
Ga0070695_10044232923300005545Corn, Switchgrass And Miscanthus RhizosphereLAAKLLGAGRVVACDLDPDAEKPVPFFVGSADAVRSNSFDIVVANINEEVLDGPLRAELERVAPKRILSGFQDEHGDWTCVVA*
Ga0070704_10205648823300005549Corn, Switchgrass And Miscanthus RhizosphereLDPEAARPVAFFQGSVDAVRSDSFEVVVANISEDVIGEMLPDFERVARVRILSGFQDDDGEWTCLIR*
Ga0070664_10068337623300005564Corn RhizosphereSVDAVRSGTFDVVVANINEDVVGSMRADFERVARVRILSGFQNDDGEWTCVTI*
Ga0068854_10144343613300005578Corn RhizosphereDALRPVPFFVGSVDAVRSNTFDLVVANINEDVLGSMRADFERVAPKRILSGFQDDDNEWTCVVI*
Ga0070761_1027252113300005591SoilVGSADAVRSRAFDAVVANISEDVIGVLRPEFERVARKRILSGFQNERGEWACVEL*
Ga0068852_10241923813300005616Corn RhizosphereVACDIDADALRPVPFFIGSVDAVRSNTFDVVVANINEDVIGSMRADFERVAPKRILSGFQDDDNEWTCVVI*
Ga0068859_10313606513300005617Switchgrass RhizospherePDAEKLVPFFVGSADAVRSDSFDIVVANINEEVLDGPLRAELERVAKTRILSGFRGDDGEWTCVVA*
Ga0068864_10076247613300005618Switchgrass RhizosphereACDIDPDAARPVPFFVGSVDAVRSNTFDIVVANINEDVVGSMRADFERVAPKRILSGFQDDDNEWTCVVI*
Ga0068858_10075068123300005842Switchgrass RhizosphereVLFFQGSVDAVRSNSFDVVVANISEDVIGEMLPDFERVAQVRILSGFQDDDGEWTCVVR*
Ga0068858_10231755413300005842Switchgrass RhizosphereVVSCDLDPEAARPVLFFQGSVDAVRSNSFDFVVANISEDVVGEMLPDFERVAQVRILSGFQDDQGEWTCIVR*
Ga0068860_10222478013300005843Switchgrass RhizosphereAKLLGAGRVIACDVDPDAARPVPFFNGSVDAVRSASFDVVVANINEDVMGPMRADFERVARKRILSGFQDDHGEWTCVVL*
Ga0066787_1012549413300005950SoilDIDPEASTREFPFFVGSVDAVRGNSFDVVVANINEQVIGSMRSDFERVARHRILSGFQDEDGEWSCVVC*
Ga0075017_10098648023300006059WatershedsIDPDAAKTAAFFVGSADAVRSASFDLVVANISEDVLGPMRADLERVAPRRILSGFRDDDGEWTCVVC*
Ga0075030_10131166623300006162WatershedsPTAAREAVFFIGSVDAVRSGAFDVVVANISEVVLGDLKAEFERVAPRRILSGFQDARGEWTCVTR*
Ga0097621_10105174123300006237Miscanthus RhizosphereFFVGSVDAVRSNTFDLVVANINEDVVGSMRADFERVAPKRILSGFQDDDNEWTCVVL*
Ga0097621_10156099413300006237Miscanthus RhizosphereAAKTLGAATVVACDIDSTAAREALFFIGSVDAVRSGAFDVVVANISEVVIGDLKAEFERVAPRRILSGFQDDRGEWTCVTA*
Ga0075021_1004859013300006354WatershedsLQEFAIPFYQGSVDAARTGAFDVVVANISDIVLDELHADFKRVARRRILSGFQDEKGEWACIVE*
Ga0075021_1024532913300006354WatershedsEAARAARFFIGSVDAVRSGAFDVVVANISEVVIGDLKEEFERVAPRRILSGFQDDQGEWTCITP*
Ga0075522_1009080333300006638Arctic Peat SoilTAAREALFFIGSVDAVRSGTFDVVVANISEVVIGDLKDEFERVAPRRILSGFQDARGEWTCVMT*
Ga0079221_1053038323300006804Agricultural SoilKMLGAERVVSCDIDPEATRTESFFIGSVDAVKPGAFDVVVANISEDVLGPMRPDFEHVARTRILSGFQNDAGEWDCVVI*
Ga0068865_10073619123300006881Miscanthus RhizosphereDIDADALRPVPFFVGSVDAVRSNTFDLVVANINEDVVGSMRADFERVARTRILSGFQDDDNEWTCVVI*
Ga0105240_1092635313300009093Corn RhizosphereIAAKLLGAGHVVACDIDADALRPVPFFIGSVDAVRSNTFDVVVANINEDVIGSMRADFERVAPKRILSGFQDDDNEWTCVVI*
Ga0105243_1144869923300009148Miscanthus RhizosphereIEPILLWSVWVATFAVDPDPAGPAFFFIGSIDAVRSGSFDVVVANINEDVIGSMRPDFERVAQRRILSGFQDDTGDWTCVIL*
Ga0105241_1040237513300009174Corn RhizosphereLSIAAKTLGAATVVACDIDSTAAREALFFIGSVDAVRSGAFDVVVANISEVVIGDLKAEFERVAPRRILSGFQDDRGEWTCVTA*
Ga0105242_1007737313300009176Miscanthus RhizosphereIDPDAAREAVFFIGSVDAVRSGAFDVVVANISEIVIGELKADFERVAPRRILSGFQDIRGEWTCVTL*
Ga0105242_1043596723300009176Miscanthus RhizosphereAFFIGSVDAIATNAFDVVVANISEIVIGNLKPEFERVAPRRILSGFQDYAGEWTCVVE*
Ga0105242_1164613823300009176Miscanthus RhizosphereSLAARLLGAGRVVSCDVDPDAVGPACFFIGSIDAVRSGSFDVVVANINEDVIGSMRPDFERVAQRRILSGFQDDTGDWTCVIL*
Ga0105242_1173564413300009176Miscanthus RhizospherePDAARPVPFFNGSVDAVRSTSFDVVVANINEDVMGPMRADFERVARKRILSGFQDDHGEWTCVVL*
Ga0105248_1015577413300009177Switchgrass RhizosphereIDPDALRPVPFFVGSVDAVRSNTFDLVVANINEDVVGSMRADFERVAPKRILSGFQDDDNEWTCVVI*
Ga0103848_100920723300009218River WaterVVPFFQGSVDAVKSNSFDVVVANISEDVVGVLYPDLARIAPVRILSGFQDEAGQWTCVVR
Ga0103869_1003495023300009257River WaterCGIEEDSAHLVPFFLGSVDAVKSNSFDVVVANISEDVVGVLYPDLARIAPVRILSGFQDEAGQWTCVVR*
Ga0105238_1111913723300009551Corn RhizosphereACDIDPDALRPVPFFVGSVDAVRSNTFDLVVANINEDVVGSMRADFERVAPKRILSGFQDDDNEWTCVVI*
Ga0126384_1214346313300010046Tropical Forest SoilVVACDIDPGADHPVLFFQGSVDAVRDGAFDIVVANISEDVIGPMYPDFERVARVRILSGFQDEDGQWMCVVK*
Ga0074045_1098434223300010341Bog Forest SoilFFVGSADAVRDAAFDVVVANISETVIEDLHPDFVRIARRRILSGFQDVRGEWTCVVE*
Ga0126379_1097061313300010366Tropical Forest SoilVGSVDAVRSGAFDVVVANISEEVIAEMRVELERVAARRILSGFQNDKGEWTCVVR*
Ga0126379_1382468223300010366Tropical Forest SoilPVPFFVGSADAVRAEAFDVVVANISEDVLGSLRPDLERVAQTRILSGFQNESGEWTCIVV
Ga0134128_1298572713300010373Terrestrial SoilVPFFVGSVDAVRSDTFDLVVANINEDVIGSMRADFERVAPKRILSGFQDDDNEWTCVVL*
Ga0105239_1331039423300010375Corn RhizosphereDPDAAGPDTFFIGSVDAVRSGAFAVVVANINEDVMGSMRADFERVARVRILSGFQNDAGEWTCVVI*
Ga0126381_10407657223300010376Tropical Forest SoilDADAAKLVPFFIGSVDAVRSSAFDVVVANINESVIEDLRPEFDRVARRQILSGFRYEQGRWACLTS*
Ga0136449_10167840513300010379Peatlands SoilPDAAKVVPFFVGSADAVRSGSFDVVVANINETVIEDLRAEFERVAPRRILSGFQDDSGNWTCLVC*
Ga0134124_1183512923300010397Terrestrial SoilSRVVECDIDSDAAKPVLFFIGSVDAVKSGSFDVAVANINESVIEDLYPDLVRVARRRILSGFQNDAGEWTCRVE*
Ga0134122_1135076823300010400Terrestrial SoilGAGRVVACDLDPDAEKPVPFFVGSADAVRSNSFDIVVANINEEVLDGPLRAELERVAPKRILSGFQDEHGDWTCVVA*
Ga0134121_1202486923300010401Terrestrial SoilPACFFIGSIDAVRSGSFDIVVANINEDVMGSMRADFERVAQKRILSGFQDDTGDWTCVIL
Ga0120139_120544013300012019PermafrostLDPEAEKVAPFFVGSVDAVRSDAFDVVVANISEAVMGEMRVDLERVASKRILSGFQDEQGEWTCVVC*
Ga0137388_1041810623300012189Vadose Zone SoilKVVPFFVGSADAVRSGAFDVVVANINEDVIGKMRAELERVAPRRILSGFQDDDGEWSYTVC*
Ga0153915_1048516813300012931Freshwater WetlandsAAFFIGSVDAVATGAFDVVVANISEIVMGELKAEFERVAPRRILSGFQDDTGEWTCVVE*
Ga0157375_1254314713300013308Miscanthus RhizosphereDHPVPFFQGSVDAVRSGSFDVVVANINEDVIGSMLPDFERVAKTRILSGFQDDHGEWTCVIR*
Ga0181538_1024000023300014162BogFVGSVDAVRSDSFDVVVANISEEVVGAMRPDLERVARKRILSGFQDEEGEWTCVVC*
Ga0181526_1006228623300014200BogIDPDAAKMAPFFVGSVDAVRSDSFDVVVANISEEVVGAMRPDLERVARERILSGFQDEEGEWTCVVC*
Ga0163163_1025606813300014325Switchgrass RhizosphereVVACDIDPDAAREAVFFIGSVDAVRSGAFDVVVANISEIVIGELKADFERVAPRRILSGFQDIRGEWTCVTL*
Ga0157377_1077247733300014745Miscanthus RhizosphereFVGSVDAVRSDTFDLVVANINEDVVGSMRADFERVAPKRILSGFQDDDNEWTCVVI*
Ga0182030_1114125123300014838BogGAGRVVACDLDEGAASPAQSFSVPFFMGSIDAVGSGSFDVVVANINEDVIGSLRPEFERVARKRILSGFQNEQGAWTCVEL*
Ga0157379_1106052513300014968Switchgrass RhizosphereLDPDAARPVPFFNGSVDAVRSASFDVVVANINEDVMGPMRADFERVARKRILSGFQDDHGEWTCVVL*
Ga0182035_1092070623300016341SoilGRVIACDLDLDAAKPVPFFVGSADAVRSGAFDVVVANISEDVLGPLRPDLERVARKRILSGFQNESGDWSCVVL
Ga0182037_1120050813300016404SoilLDAAKPVPFFVGSADAVRSGAFDVVVANISEDVLGPLRPDLERVARKRILSGFQNESGDWSCVVL
Ga0187781_1008810233300017972Tropical PeatlandFVGSVDAVRPHSFDVVIANISEPVIEDLAGEFARVARRQILSGFQDENGNWTCRVI
Ga0187890_1007168323300018044PeatlandRVVPFFVGSVDAVRTRSFDIVVANINEAVVEDLREEFERVAPVRILSGFQDDLGEWTCVV
Ga0210383_1029826833300021407SoilAVPFFVGSADAVRDDAFDIVVANISDEVLGSLRADLERVARKRILSGFQDEAGEWACAIS
Ga0210383_1087634313300021407SoilGAGRVVACDIDPAVTERAAKVAPFFVGSVNAVRTGVFDVVVANISESVIGELRPEFERVARKRILSGFQDEKGEWACVVC
Ga0210409_1025437913300021559SoilARVAPFFVGSADAVRSGSFDVVVANISEAVMGEMRAELERVATRRILSGFQDERGEWTCVVC
Ga0213853_1132167323300021861WatershedsFIGSVDAVSAGAFDVVVANINEDVIGPLRVEFERVARTRILSGFQDDRGEWTCVVL
Ga0242665_1010433323300022724SoilVGAVRAGAFDVVVANINEDVMGCLRAEFERVASRRILSGFQDDDGEWTCVVETAPDS
Ga0209483_106482733300025862Arctic Peat SoilTAAREALFFIGSVDAVRSGTFDVVVANISEVVIGDLKDEFERVAPRRILSGFQDARGEWTCVMT
Ga0207654_1015045713300025911Corn RhizosphereLSIAAKTLGAATVVACDIDSTAAREALFFIGSVDAVRSGAFDVVVANISEVVIGDLKAEFERVAPRRILSGFQDDRGEWTCVTA
Ga0207695_1127024213300025913Corn RhizosphereAPAFFIGSGDAVATNACDVVIANISEIVIGDLKPEFDRVAPRRILSGFQDAAGEWTCIVE
Ga0207695_1137287223300025913Corn RhizosphereDPEAAHAPAFFIGSVDAVATNAFDVVIANISEIVIGDLKPEFDRVAPRRILSGFQDAAGEWTCVVE
Ga0207663_1023804813300025916Corn, Switchgrass And Miscanthus RhizosphereAPFFIGSVDAVCSGVFDVVVANISEVVIGELKAEFERVAPRRILSGFQDARGEWTCVTR
Ga0207662_1075000413300025918Switchgrass RhizosphereALRPVPFFVGSVDAVRSNTFDLVVANINEDVLGSMRADFERVAPKRILSGFQDDDNEWTCVVI
Ga0207700_1070473923300025928Corn, Switchgrass And Miscanthus RhizosphereGPESFFVGSVDAVRSDTFDLVVANINEDVMGSMRADFERVAPVRILSGFQNDDGEWTCVV
Ga0207701_1118385613300025930Corn, Switchgrass And Miscanthus RhizosphereRLLGAGRVVACDLDPDAEKPVPFFVGSADAVRSNSFDIVVANINEEVLDGPLRAELERVAPKRILSGFQDEHGDWTCVVA
Ga0207686_1079961613300025934Miscanthus RhizosphereAREAQFFVGSVDAVRSGAFDVVVANISEVVIGDLKAEFERVAPRRILSGFQDERGEWTCVTR
Ga0207709_1134483113300025935Miscanthus RhizosphereDAARTPAFFIGSVDAVASDAFDVVIANISEIVIGDLKPEFERVAPRRILSGFQDAAGEWTCVVE
Ga0207670_1012171113300025936Switchgrass RhizosphereYYYLRVINAVIRNVDPDAARPVPFFQGSVDAVRSDSFDVVVANINEDVIGCMLPDFERVARVRILSGFQDDKGEWTYVVRGSH
Ga0207670_1028401613300025936Switchgrass RhizosphereSLAARLLGAGRVVSCDVDPDAVGPACFFIGSIDAVRSGSFDVVVANINEDVIGSMRPDFERVAQRRILSGFQDDTGDWTCVIL
Ga0207711_1171603923300025941Switchgrass RhizosphereAKLLGAGRVVACDIDTDAEKQVPFFVGSADAVRSGSFDIVVANINEEVLDGPLRAELERVAKKRILSGFRDDDGEWTCVVA
Ga0207679_1137324913300025945Corn RhizosphereDALRPVPFFVGSVDAVRSNTFDLVVANINEDVVGSMRADFERVAPKRILSGFQDDDNEWTCVVI
Ga0207640_1195756513300025981Corn RhizosphereAAREALFFVGSVDAVRSGAFDVVVANISEVVIGDLKAEFERVAPRRILSGFQDARGEWTCVTR
Ga0207677_1106001913300026023Miscanthus RhizosphereCDIDSDAARPVPFFVGSVDAVGSNTFDVVVANINEDVVGSMRADFERVAPKRILSGFQDEDGDWTCVLI
Ga0207677_1179570723300026023Miscanthus RhizosphereDIDADALRPVPFFVGSVDAVRSNTFDLVVANINEDVVGSMRADFERVAPKRILSGFQDDDNEWTCVVI
Ga0207639_1228122923300026041Corn RhizospherePTGFNVPFFIGSIDAVRSGAFDVVVANINEDVIGPMRADFERVARLRILSGFQNDDGEWTCVTL
Ga0207702_1023429023300026078Corn RhizospherePDAARSPAFFIGSVDAVATNAFDVVIANISEIVIGDLKPEFDRVAPRRILSGFQDAAGEWTCIVE
Ga0207698_1141921213300026142Corn RhizosphereQVVACDIDPESSREGDFFVGSVDAVRSGCFDVVIANISDVVIYELKPEFDRVAPRRILSGFQSDAGDWTCVVE
Ga0209068_1024811923300027894WatershedsAEAARAARFFIGSVDAVRSGAFDVVVANISEVVIGDLKEEFERVAPRRILSGFQDDQGEWTCITP
Ga0209069_1034701323300027915WatershedsFMGSADAVRTAAFDVVVANISDIVLHELHPDLERVARRRILSGFQDERGEWSCVVE
Ga0308309_1170753913300028906SoilAGTVVACDIDSTAARAALFFIGSVDAVRSGTFDVVVANISEVVIGDLKAEFERVAPRRILSGFQDDRGEWTCVTG
Ga0222749_1055764823300029636SoilFVGSVDAVRSGAFDVVVANINEDVIGPMRPEFERVARTRILSGFQDERGEWTCVVS
Ga0310686_10108171523300031708SoilLSFKVPFFVGSVDAVRSGAFDVVVANINEDAIGVLRPEFERVARKRILSGFQDERGEWACVEC
Ga0310686_11991951023300031708SoilAAKAVPFFVGSADAVRDDAFDIVVANISDEVLGSLRADFERVARRRILSGFQDEAGEWACVVR
Ga0307474_1028640423300031718Hardwood Forest SoilVGSVDAVRDNTFDVVVANINEEVIGSMRPDFERVAKHRILSGFQNDEGEWTCVVC
Ga0307475_1134690413300031754Hardwood Forest SoilTVVACDIDSTAAREALFFIGSVDAVRSGAFDVVVANISEVVIGDLRAEFERVAPRRILSGFQDDRGEWTCVTR
Ga0307473_1050662713300031820Hardwood Forest SoilAGLVISCDLDPDAAKMAPFFVGSADAVRNGSFDVVVANISEAVMGEMREELERAAAKRILSGFQDERGEWACVIC
Ga0306922_1063279513300032001SoilDPDAAKPVPFFAGSVDAVRSGAFDVVVANINESVIEELHPELVRVAQTRILSGFRDDAGAWICRVEYNQ
Ga0307471_10373054413300032180Hardwood Forest SoilIAALMLGAATVVACDIDFTAAREALFFIGSVDAVRSGAFDVVVANISEVVIGELKAEFERVAPRRILSGFQDARGEWTCVTR
Ga0335079_1074381813300032783SoilAKPVPFFVGSVDAVRSASFDVVVANINETVIEDLRPEFDRVAARQILSGFQDEEGNWACLTRGGTGFSP
Ga0335074_1126385813300032895SoilQAARLVPFFVGSVDAVRSHSFDVVVANISDWVIEELRPEFSRVARRQILSGFRDEQGRWTCVVA
Ga0310810_1084474423300033412SoilRLLGAGRVVSCDVDPDAVGPACFFIGSVDAVRSGSFDIVVANINEDVIGSMLPDFERVARKRILSGFQNEGGEWTCVIL

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Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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