NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F084366

Metagenome / Metatranscriptome Family F084366

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F084366
Family Type Metagenome / Metatranscriptome
Number of Sequences 112
Average Sequence Length 54 residues
Representative Sequence VTFRKYLVLAGVTVFAAAGDSMLSHGMKQAGSISLHHLQGVILAVLNPWVAVGI
Number of Associated Samples 100
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 56.25 %
% of genes near scaffold ends (potentially truncated) 99.11 %
% of genes from short scaffolds (< 2000 bps) 94.64 %
Associated GOLD sequencing projects 97
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (58.929 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(22.321 % of family members)
Environment Ontology (ENVO) Unclassified
(25.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(53.571 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 60.98%    β-sheet: 0.00%    Coil/Unstructured: 39.02%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF04055Radical_SAM 39.29
PF09957VapB_antitoxin 1.79
PF05995CDO_I 0.89
PF0563523S_rRNA_IVP 0.89
PF02321OEP 0.89
PF13424TPR_12 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 1.79
COG5553Predicted metal-dependent enzyme of the double-stranded beta helix superfamilyGeneral function prediction only [R] 0.89


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms58.93 %
UnclassifiedrootN/A41.07 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001356|JGI12269J14319_10164315All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae926Open in IMG/M
3300002245|JGIcombinedJ26739_101096139All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae683Open in IMG/M
3300002568|C688J35102_120339433All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1000Open in IMG/M
3300004080|Ga0062385_11210783All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae517Open in IMG/M
3300004092|Ga0062389_103454439All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae592Open in IMG/M
3300004092|Ga0062389_104295446All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae536Open in IMG/M
3300004104|Ga0058891_1534501All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae985Open in IMG/M
3300004121|Ga0058882_1026166All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1474Open in IMG/M
3300004631|Ga0058899_10030459All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae570Open in IMG/M
3300004631|Ga0058899_12204340All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1551Open in IMG/M
3300005367|Ga0070667_101874535All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae564Open in IMG/M
3300005529|Ga0070741_10847442All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae795Open in IMG/M
3300005538|Ga0070731_11039880All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae542Open in IMG/M
3300005541|Ga0070733_10332906All Organisms → cellular organisms → Bacteria1005Open in IMG/M
3300005557|Ga0066704_10996320All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae517Open in IMG/M
3300005602|Ga0070762_10710645All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae675Open in IMG/M
3300005610|Ga0070763_10161649All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1176Open in IMG/M
3300005614|Ga0068856_102697416Not Available502Open in IMG/M
3300005764|Ga0066903_107497328All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae563Open in IMG/M
3300006059|Ga0075017_100042987All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3014Open in IMG/M
3300006237|Ga0097621_101674868All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae605Open in IMG/M
3300006354|Ga0075021_10764111All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae623Open in IMG/M
3300007788|Ga0099795_10377627All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae639Open in IMG/M
3300009634|Ga0116124_1079125All Organisms → cellular organisms → Bacteria941Open in IMG/M
3300011120|Ga0150983_10429841Not Available583Open in IMG/M
3300011120|Ga0150983_10630363Not Available695Open in IMG/M
3300011120|Ga0150983_12853176Not Available1001Open in IMG/M
3300011120|Ga0150983_15214114Not Available1379Open in IMG/M
3300012209|Ga0137379_10976425Not Available752Open in IMG/M
3300012354|Ga0137366_10085280All Organisms → cellular organisms → Bacteria → Acidobacteria2401Open in IMG/M
3300012469|Ga0150984_105649289All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae835Open in IMG/M
3300012924|Ga0137413_11223510All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia600Open in IMG/M
3300012925|Ga0137419_10408422All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1062Open in IMG/M
3300012930|Ga0137407_10351426All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1358Open in IMG/M
3300014657|Ga0181522_10221355Not Available1116Open in IMG/M
3300015373|Ga0132257_103966593All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300017933|Ga0187801_10124662Not Available990Open in IMG/M
3300017946|Ga0187879_10160045Not Available1271Open in IMG/M
3300018012|Ga0187810_10429570All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae558Open in IMG/M
3300018017|Ga0187872_10315917Not Available679Open in IMG/M
3300018047|Ga0187859_10114230Not Available1423Open in IMG/M
3300018086|Ga0187769_10167781Not Available1615Open in IMG/M
3300019258|Ga0181504_1152818All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1385Open in IMG/M
3300019260|Ga0181506_1279643All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae656Open in IMG/M
3300019284|Ga0187797_1234966Not Available1841Open in IMG/M
3300020581|Ga0210399_11081705Not Available642Open in IMG/M
3300021170|Ga0210400_10166358Not Available1782Open in IMG/M
3300021171|Ga0210405_10820675Not Available711Open in IMG/M
3300021181|Ga0210388_10120580All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2260Open in IMG/M
3300021401|Ga0210393_10489693Not Available1004Open in IMG/M
3300021401|Ga0210393_11499152Not Available537Open in IMG/M
3300021402|Ga0210385_10915584All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae673Open in IMG/M
3300021405|Ga0210387_10698718All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae899Open in IMG/M
3300021474|Ga0210390_11215418All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae608Open in IMG/M
3300021476|Ga0187846_10397606All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae566Open in IMG/M
3300021861|Ga0213853_10097297All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae826Open in IMG/M
3300022507|Ga0222729_1053157All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae565Open in IMG/M
3300022522|Ga0242659_1004331All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1748Open in IMG/M
3300022522|Ga0242659_1041553All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae788Open in IMG/M
3300022714|Ga0242671_1004372Not Available1453Open in IMG/M
3300022717|Ga0242661_1057865Not Available738Open in IMG/M
3300022720|Ga0242672_1044750Not Available725Open in IMG/M
3300022720|Ga0242672_1114975Not Available544Open in IMG/M
3300022722|Ga0242657_1107196All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae695Open in IMG/M
3300022724|Ga0242665_10085870Not Available909Open in IMG/M
3300022732|Ga0224569_111887Not Available612Open in IMG/M
3300025910|Ga0207684_11704290All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae508Open in IMG/M
3300025928|Ga0207700_11151948Not Available693Open in IMG/M
3300026294|Ga0209839_10198741Not Available644Open in IMG/M
3300026335|Ga0209804_1065655All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1733Open in IMG/M
3300026551|Ga0209648_10078906All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2752Open in IMG/M
3300027625|Ga0208044_1167607All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae601Open in IMG/M
3300027648|Ga0209420_1084771Not Available912Open in IMG/M
3300027676|Ga0209333_1013932All Organisms → cellular organisms → Bacteria2341Open in IMG/M
3300027855|Ga0209693_10165811Not Available1090Open in IMG/M
3300027867|Ga0209167_10387735Not Available761Open in IMG/M
3300027884|Ga0209275_10506899Not Available688Open in IMG/M
3300028015|Ga0265353_1007526All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae950Open in IMG/M
3300028047|Ga0209526_10206351All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. S1561359Open in IMG/M
3300028577|Ga0265318_10292174Not Available595Open in IMG/M
3300028747|Ga0302219_10203965All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae763Open in IMG/M
3300028808|Ga0302228_10064990All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1739Open in IMG/M
3300029986|Ga0302188_10185439All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae885Open in IMG/M
3300030042|Ga0302300_1193549All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae571Open in IMG/M
3300030598|Ga0210287_1184267All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae566Open in IMG/M
3300030602|Ga0210254_11290914Not Available781Open in IMG/M
3300030626|Ga0210291_10562575All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae542Open in IMG/M
3300030707|Ga0310038_10326819All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae684Open in IMG/M
3300030740|Ga0265460_10466071Not Available962Open in IMG/M
3300030741|Ga0265459_10964088Not Available887Open in IMG/M
3300030741|Ga0265459_11652741Not Available744Open in IMG/M
3300030836|Ga0265767_103489Not Available889Open in IMG/M
3300030839|Ga0073999_10727992Not Available523Open in IMG/M
3300030874|Ga0265742_1002621Not Available1112Open in IMG/M
3300031241|Ga0265325_10280252Not Available748Open in IMG/M
3300031249|Ga0265339_10475464All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae578Open in IMG/M
3300031715|Ga0307476_11267488All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae538Open in IMG/M
3300031718|Ga0307474_10208345All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1490Open in IMG/M
3300031718|Ga0307474_11393469All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300031754|Ga0307475_10855812Not Available719Open in IMG/M
3300031820|Ga0307473_10577084Not Available772Open in IMG/M
3300031820|Ga0307473_10968061Not Available619Open in IMG/M
3300031837|Ga0302315_10110839Not Available1763Open in IMG/M
3300031891|Ga0316039_101360All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1287Open in IMG/M
3300031954|Ga0306926_11899326Not Available673Open in IMG/M
3300032515|Ga0348332_12781808All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae533Open in IMG/M
3300032515|Ga0348332_14489840Not Available726Open in IMG/M
3300032756|Ga0315742_13362853All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae516Open in IMG/M
3300032782|Ga0335082_10952548Not Available722Open in IMG/M
3300032783|Ga0335079_10099077All Organisms → cellular organisms → Bacteria → Acidobacteria3305Open in IMG/M
3300032954|Ga0335083_10339983All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1303Open in IMG/M
3300033405|Ga0326727_10478875All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1095Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil22.32%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil10.71%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.36%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.36%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland4.46%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.57%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.57%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.57%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa3.57%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil2.68%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.68%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.68%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere2.68%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.79%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.79%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.79%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter1.79%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.89%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.89%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.89%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.89%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.89%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.89%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.89%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.89%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.89%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.89%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.89%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.89%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.89%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.89%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004104Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004121Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009634Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300018012Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5EnvironmentalOpen in IMG/M
3300018017Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40EnvironmentalOpen in IMG/M
3300018047Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10EnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300019258Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019260Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019284Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022507Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022522Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022714Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022717Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022720Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022722Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022732Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU1Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026294Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)EnvironmentalOpen in IMG/M
3300026335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027625Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027648Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027676Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300028015Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028577Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaGHost-AssociatedOpen in IMG/M
3300028747Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2EnvironmentalOpen in IMG/M
3300028808Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2EnvironmentalOpen in IMG/M
3300029986Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_1EnvironmentalOpen in IMG/M
3300030042Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_1EnvironmentalOpen in IMG/M
3300030598Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE048SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030602Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO133-ANR018SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030626Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE110SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300030740Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assemblyEnvironmentalOpen in IMG/M
3300030741Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assemblyEnvironmentalOpen in IMG/M
3300030836Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030839Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFB (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030874Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031241Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaGHost-AssociatedOpen in IMG/M
3300031249Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaGHost-AssociatedOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031837Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1EnvironmentalOpen in IMG/M
3300031891Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLA3 metaT (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032756Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined AssemblyEnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300033405Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MYEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12269J14319_1016431513300001356Peatlands SoilVTFRKYLVLAGVTVFGAAGDSMLSHGMKQAGNISLHHLPSVILAVLNPYVACGIVLLLGFIVLNMN
JGIcombinedJ26739_10109613913300002245Forest SoilVNFRKYLVLAGVTVFAAAGDSMLSHGMKQTGSISLNHLQGVIFAITNPWVAIGILLLLAFFATYMTAL
C688J35102_12033943323300002568SoilVLGTEYVYVTFRKYVVLAGVTVFAAAGDSMLSHGMKQAGSISIHHLQGLVLA
Ga0062385_1121078323300004080Bog Forest SoilVTFRKYVVLAGVTVFAAAGDSMLSHGMKQTGSISIHHLQGVIFAVLNPWVAVGILLLLA
Ga0062389_10345443923300004092Bog Forest SoilVTIRKYLVLAGVTVFAPAGDSMLSYGMKQVGRVSPSHLQSVVAAVLNPWV
Ga0062389_10429544623300004092Bog Forest SoilVTFRKYLVLAGVTVFAAAGDSMLSHGMKQTGSISLNHLQGVIYAVLNPWVAVGILLL
Ga0058891_153450113300004104Forest SoilVTIRKYLVLAGVTVFAPAGDSMLSYGMKQVGRVSPRHLQSVIAAVLN
Ga0058882_102616623300004121Forest SoilVTFRKYLVLAGVTVFAAAGDSMLSHGMKQTGSISLNHLQGVIFAILNPWVAIGILLL
Ga0058899_1003045913300004631Forest SoilLTLRKYLVLAGVTVFAAAGDSMLSHGMKQTGSISVHHLEGIILAVLNPW
Ga0058899_1220434023300004631Forest SoilVNFRKYLVLAGVTVFAAAGDSMLSHGMKQTGSISLNHLQGVIFAILNP
Ga0070667_10187453523300005367Switchgrass RhizosphereVTLRKYLVLAGVTFFGSVGDSMLAHGMQQVGSVSLAHLPSVVLSILNPWVAVGILFL
Ga0070741_1084744213300005529Surface SoilVTYRKYLVLAGVTVFAAAGDSMLAHGMKQTGNIDIHHLRAVISAVLN
Ga0070731_1103988013300005538Surface SoilVTFRKYLVLAGVTVFAAAGDSMLSHGMKQTGSISIHHLQGVISAVLNPWV
Ga0070733_1033290613300005541Surface SoilMNFRKYLVLAGVTVFAAAGDSMLSHGMKQTGSISIHHLQSVVLAVLNPWVAGGILLLLAFFA
Ga0066704_1099632013300005557SoilVTFRKYLVLAGITVFAAAGDSMLSHGMKQTGTISIHHLQCVILAILNPWVAVGIV
Ga0070762_1071064523300005602SoilVTFRKYLVLAGVTVFAAAGDSMLSHGMKQAGAISIHHLQGVILAILNPWVAVGIVLLLAFFAS
Ga0070763_1016164923300005610SoilLTFRKYLVLAGVTVFAAAGDSMLSHGMKQNGGISVHHLQGVIAAVLNPWVAVGIVLLLAFFA
Ga0068856_10269741623300005614Corn RhizosphereVTFRKYLVLAGVTVFAAAGDSILSHGMKQTGAISIHHLQGIILALRNPFVALGIL
Ga0066903_10749732813300005764Tropical Forest SoilVTFRKYLVLAGVTVFAAAGDSMLSHGMKLVGAVSLAPLQSVVLAVLNP
Ga0075017_10004298743300006059WatershedsVTFRKYLVLAGVTVFAAAGDSMLSHGMKQTGNISLHHLQGVVLAVLNP
Ga0097621_10167486813300006237Miscanthus RhizosphereVTFRKYLVLAGVTVFAAAGDSILSHGMKQTGAISIHHLQGIILALRNPFVALGILLLLA
Ga0075021_1076411123300006354WatershedsLTSRKYLVLAGVTVFAAAGDSMLSHGMKQTGSVSVHHLQGLILAVLN
Ga0099795_1037762713300007788Vadose Zone SoilVNFRKYLVLAGVTVFAVAGDSMLSHGMKQVGSISIHHLQNVFLAVANAWVAIGILFLLGF
Ga0116124_107912513300009634PeatlandMNFRKYLVLAGVTVFAAAGDSMLSHGMKQTGNISLNHLPSVIFAILNPWVAGGILLL
Ga0150983_1042984123300011120Forest SoilVTFRKYLVLAGVTVFAAAGDSVLSHGMKQASRVSLHHPLSLILAVLNPW
Ga0150983_1063036313300011120Forest SoilLTLRKYLVLAGVTVFAAAGDSMLSHGMKQTGSISVHHLEGIILAVLNPWVAL
Ga0150983_1285317623300011120Forest SoilLTIRKYLVLAGVTVFAPAGDSMLSYGMKQVGRVSPRHLQSVVAAVLNPWVAVGIL
Ga0150983_1521411413300011120Forest SoilVNFRKYLVLAGVTVFAAAGDSMLSHGMKQTGNISIHHLQGVIYAILNPWVAV
Ga0137379_1097642513300012209Vadose Zone SoilVTFRKYLVLAGVTVFAAAGDSMLSHGMKQAGSISLHHLQGVILAVLNPWVAVGI
Ga0137366_1008528013300012354Vadose Zone SoilLTFRKYLVLAGVTAFAAAGDSMLSHGMKQTGSISLHHLKGVLLAVLNPW
Ga0150984_10564928913300012469Avena Fatua RhizosphereVNFRKYLVLAGVTVFAAAGDSMLSHGMKQAGGISIHHLQSLIMAVLNPW
Ga0137413_1122351013300012924Vadose Zone SoilVNFRKYLVLAGVTVFAVAGDSMLSHGMKQVGAISLHHLQSVFLAVANPWVALGIL
Ga0137419_1040842213300012925Vadose Zone SoilVNFRKYLVLAGVTVFAAAGDSMLSHGMKQAGNISLHHLQSVFWAVLNPWVAVGIV
Ga0137407_1035142623300012930Vadose Zone SoilVTFRKYLVLAGVTLFAAIGDSFLARGMQQVGNISLHHLPDLVLTILNPWVALGILFLLGF
Ga0181522_1022135513300014657BogMSTHLTFRKYLVLAGVTVFAAAGDTMLSHGMKQAGNISLHRLSGVILAVLNPW
Ga0132257_10396659313300015373Arabidopsis RhizosphereVTFRKYLVLAGVTVFAAAGDSMLSHGMKQTGAISVHHLQGVILALRNPFVVMGILL
Ga0187801_1012466213300017933Freshwater SedimentLTFRKYLVLAGVTVFAAAGDSMLSHGMKQAGSISIHHLQGVVLAVLNPWVAVGILLL
Ga0187879_1016004513300017946PeatlandVNFRKYLVLAGVTVFAATGDSMLSHGMKQTGNISLNHLQGVIFAILNPWVSIGIL
Ga0187810_1042957013300018012Freshwater SedimentLTFRKYLVLAGVTVFAAAGDSMLSHGMKQAGSISIHHLQGVVLAVLNPWVAVGIVLLLAFFA
Ga0187872_1031591713300018017PeatlandVNFRKYLVLAGVTVFAATGDSMLSHGMKQTGNISLNHLQGVIFAILNPWVS
Ga0187859_1011423013300018047PeatlandVTFRKYLVLAGVTVFAAAGDSVLSHGMKQAGRVSLHHPLSLILAVLNPWVA
Ga0187769_1016778113300018086Tropical PeatlandVNFRKYLVLAGVTVFAAAGDSMLSHGMKHTGGISLHQLQGVIFAVLN
Ga0181504_115281813300019258PeatlandVNFRKYLILAGVTLFASTGDAMLSHGMKQTGSISIHHLQGVIFAVLNPWVAVGILLLLAF
Ga0181506_127964313300019260PeatlandVTLRKYLVLAGVTVLGAAGDSMLSHGMKQAGNISLRHLPSVILAVLNPYVALGIVLLL
Ga0187797_123496613300019284PeatlandVNFRKYLVLAGVTVFAAAGDSMLSHGMKHTGGISLHQLQGVIFAVLNHWDAIGI
Ga0210399_1108170513300020581SoilVTFRKYLVLAGVTVFAAAGDSMLSHGMKQAGNISIHHLQGVILAVLNPWVAIGIL
Ga0210400_1016635813300021170SoilVNFRKYLVLAGVTVFAAAGDSMLSHGMKQTGNISLNHLQGVIFAILNPWV
Ga0210405_1082067523300021171SoilVTIRKYAVLAGVTVFAAAGDSMLSHGMKQTGNISLQHLQGVLLAVLNPWV
Ga0210388_1012058013300021181SoilVTFRKYLVLAGVTVFAAAGDAMLSHGMKQTGNIAIHHLESVIFAILNPWVAIGILLLLAFFATYMTAL
Ga0210393_1048969313300021401SoilVTLRKYLVLAGVTVFGAAGDSMLSHGMKQAGNISLHHLQGVILAVLNPWVAVGI
Ga0210393_1149915213300021401SoilMGHPLAVRVQVTFRKYLVLAGVTVFGAAGDSVLSHGMKQVGNISIHDLPSLIFAVMNPYV
Ga0210385_1091558413300021402SoilVTFRKYLVLAGVTVFGAAGDSVLSHGMKQVGNISIHDLPSLIFAVMNPYVMAGILLL
Ga0210387_1069871823300021405SoilVNSRKYLVLAGVSLFAAAGDSMLSHGMKQTGNISPSHLQGVILAVLNPWVAVGIILLLAFFAAYMNA
Ga0210390_1121541813300021474SoilVTFRKYLVLAGVTVFAAVGDSMLSHGMKQTGNISLHHLQSIILAVLNPWV
Ga0187846_1039760623300021476BiofilmVNFRKYLVLAGVTVFAAAGDTMLSHGMKQTGSISLNHLQGVIFAVLNPWVAVGILLLLAFFATYM
Ga0213853_1009729713300021861WatershedsVTFRKYLVLAGVTVFAAAGDSMLSHGMKQAGSVSVHHLQSLALAVLNPWVAVGILLLLAFFA
Ga0222729_105315723300022507SoilVTFRKYLVLAGVTVFAAAGDSVLSHGMKQASRVSLHHPLSLILAVLNPWVAGGILLLLAFFA
Ga0242659_100433123300022522SoilVTFRKYLVLAGVTLCASIGDSFLSRGMKQVGSISLNHLSHVILAVLNP
Ga0242659_104155313300022522SoilVTFRKYLVLAGVTVFAAAGDSMLSHGMKQTGTISIHHLQGVILAILNPWVAVGIVLLLAFFA
Ga0242671_100437213300022714SoilVTFRKYLVLAGVTVFAVAGDSMLSHGMKQVGAISLHHLQSVLFAVANPWVAL
Ga0242661_105786523300022717SoilVTFRKYLVLAGITVFAAAGDSMLSHGMKQTGTISIHHLQGVILAILNPW
Ga0242672_104475013300022720SoilVNLRKYLVLAGVTVFAAAGDSMLSHGMKQTGNISLHHLQGVLLALLNPW
Ga0242672_111497513300022720SoilVTFRKYLVLAGVTVFGAAGDSMLSHGMKQAGNISLNHLPSVILAILNP
Ga0242657_110719613300022722SoilVTFRKYLVLAGVTVFGAAGDSVLSHGMKQVGNISIHDLPSLIFAVMNPYVMVGILL
Ga0242665_1008587023300022724SoilVTFRKYLVLAGVTVFAAAGDSMLSHGMKQTGTISIHHLQGVILAILNPWVAVGIVL
Ga0224569_11188723300022732RhizosphereVNFRKYLVLAGVTVFAAAGDSMLSHGMKQTGNISLHHLRGVIFAVLN
Ga0207684_1170429013300025910Corn, Switchgrass And Miscanthus RhizosphereVTFRKYLVLAGVTVFAAAGDSMLAHGMKQAGNISLHHLQSVLLAVLNPW
Ga0207700_1115194813300025928Corn, Switchgrass And Miscanthus RhizosphereVTIRKYLVLAGVTVFAPAGDSMLSYGMKQVGRVSPSHMQSVVAAVLNP
Ga0209839_1019874123300026294SoilVNLRKYLVLAGVTVFAAAGDSMLSHGMKQTGNISLYHLQGVLLALLNPWV
Ga0209804_106565513300026335SoilLTFRKYLVLAGVTVFAAAGDSMLSHGMKQVGNISVHNIGSLFLAVSNPWV
Ga0209648_1007890633300026551Grasslands SoilVSFRKYLVLAGVTVFAAAGDSMLAHGMKQAGNISLHHLQSVLLAVLNPWVAIGI
Ga0208044_116760723300027625Peatlands SoilVTLRKYLVLAGVTVFGAAGDSMLSHGMKQTGNISLHHLPSVILAVLNPGVAFGIVLLLGFVVLNMN
Ga0209420_108477113300027648Forest SoilVNFRKYLVLAGVTVFAVAGDSMLSHGMKQVGTISIHHLQSVFSAVTNPWVALG
Ga0209333_101393213300027676Forest SoilVTFRKYLVLAGVTVFAAAGDSMLSHGMKQTGSISLSHLQGVIFAVLNPWVAV
Ga0209693_1016581123300027855SoilLTFRKYLVLAGVTVFAAAGDSMLSHGMKQNGGISVHHLQGVIAAVLNPW
Ga0209167_1038773523300027867Surface SoilVTLRKYLVLAGVTVFGAAGDSMLSHGMKQAGNISLNHLPSVILAILNPGVA
Ga0209275_1050689913300027884SoilVTFRKYLVLAGVTVFAAAGDSMLSHGMKQTGSISLSHLQGVIFAVLNPWVAVG
Ga0265353_100752613300028015SoilVNFRKYLVLAGVTVFAAAGDSMLSHGMKQTGNISLNHLQSVILAILNPWVAIGILLLLAF
Ga0209526_1020635133300028047Forest SoilVTLRKYLVLAGVTVFAAAGDSMLSHGMKQTGNISLHHLQGIILALLNPWVA
Ga0265318_1029217413300028577RhizosphereLTLRKYLVLAGVTVFAAAGDTMLSHGMKQTGNISIHHLQGVIYAVLNPWVAVGII
Ga0302219_1020396523300028747PalsaVTIRKYLVLAGVTIFAPAGDSMLSYGMKQVGRVSPNHLQSVVAAVLNPWVAV
Ga0302228_1006499023300028808PalsaVNFRKYLVLAGVTVFAAAGDSMLSHGMKQTGSISLHHLQGVIFAILNPWVAVGILLLLAFFATYM
Ga0302188_1018543923300029986BogVNFRKYLVLAGVTVFAAAGDSMLSHGMKQAGNISLNHLQSVIFAVLNPWVAGGILLLLAF
Ga0302300_119354913300030042PalsaVNFRKYLVLAGVTVFAAAGDSMLSHGMKQTGSISLHHLQGVIFAILNPWVAVGILLLLAFFATY
Ga0210287_118426713300030598SoilVNFRKYLVLAGVTVFAAAGDSMLSHGMKQTGSISIHHLQGVILAVLNPWVAFGILLLLAF
Ga0210254_1129091423300030602SoilVTFRKYLVLAGVTVFAAAGDSVLSHGMKQASRVSLHHPLSLILAVLNPWVAGGKENKIKKDKKKG
Ga0210291_1056257523300030626SoilVTFRKYLVLAGVTVFAAAGDSVLSHGMKQASRVSLHHPLSLILAVLNPWVAGGILLLLAFFAAYMNALS
Ga0310038_1032681923300030707Peatlands SoilVTFRKYLVLAGVTVFAAAGDSMLSHGMKQTGNISVHHLQGVFSAVLNPWIAGGILLLLAFFAAYMNAL
Ga0265460_1046607123300030740SoilVNFRKYLVLAGVTVFAAAGDSMLSHGMKQTGSISLNHLQGVIFAILNPWVEKIT
Ga0265459_1096408813300030741SoilVNFRKYLVLAGVTVFAAAGDSMLSHGMKQTGSISLHHLQGVVFAVLNP
Ga0265459_1165274113300030741SoilVNLRKYLVLAGVTVFAAAGDSMLSHGMKQAGNISLHHLQGVFLTLLNP
Ga0265767_10348923300030836SoilVTFRKYLVLAGVTVFAAAGDSVLSHGMKQASRVSLHHPLSLIFAVLNPWVAFGIL
Ga0073999_1072799213300030839SoilVNLRKYLVLAGVTVFAAAGDSMLSHGMKQTGNISLHHLQGIILAVLNP
Ga0265742_100262123300030874SoilVTFRKYLVLAGVTVFAAAGDSVLSHGMKQASRVSLHHPLSLIFAVLN
Ga0265325_1028025213300031241RhizosphereVTFRKYLVLAGVTVFAAAGDSMLSHGMKQTGNISLHHLQGVIFAVRNPFVAV
Ga0265339_1047546413300031249RhizosphereVTFRKYLVLAGVAVFAATGDPMLSYGMKQAGSISIHHLQSVIFAVLNPWVAVGILLLLAF
Ga0307476_1126748813300031715Hardwood Forest SoilVLAGVTVFAAAGDSMLSHGMKQAGNISLHHLQSVILAVLNPWVAVGILLLLAFFA
Ga0307474_1020834513300031718Hardwood Forest SoilVTFRKYLVLAGVTVFAAAGDSMLSHGMKQTGNISLHHLQGIILAVLNPWVAVGIVLLLA
Ga0307474_1139346923300031718Hardwood Forest SoilVTFRKYLVLAGVTVFAAAGDSMLSHGMKQAGNISIHHLQGVILAVLNPW
Ga0307475_1085581213300031754Hardwood Forest SoilVTFRKYLVLAGITVFAAAGDSMLSHGMKQTGTISIHHLQGVILAILNPWVAVG
Ga0307473_1057708423300031820Hardwood Forest SoilVTFRKYLVLAGITLFAATGDSLLSHGMKQVGSVSLSHWTSVIFAVLNPS
Ga0307473_1096806123300031820Hardwood Forest SoilLTFRKYLVLAGITVLAAAGDSMLSHGMKQTGNISIHHLQGVVLAILNPWVAV
Ga0302315_1011083923300031837PalsaVNFRKYLVLAGVTVFAVAGDSMLSHGMKQVGTISIHHLQSVFPAVTNPWVALGIL
Ga0316039_10136013300031891SoilVNFRKYLVLAGVTVFAAAGDSMLSHGMKQTGSISLHHLQGVVFAVLNPWVAVGILLLLAF
Ga0306926_1189932613300031954SoilVTFRKYLVLAGVTVFAAAGDSMLSHGMKQAGSISIHHLQGVVLAVLNP
Ga0348332_1278180823300032515Plant LitterVNFRKYLVLAGVTVFAAAGDSMLSHGMKQTGNISLHHLRGVIFAVLNPWVAIGILLLLAFFATY
Ga0348332_1448984013300032515Plant LitterVTFRKYLVLAGVTVFAAAGDSVLSHGMKQAGRVSLHHPLSLILAVLNPWVACGILL
Ga0315742_1336285313300032756Forest SoilVNFRKYLVLAGVTVFAAAGDSMLSHGMKQTGSISLNHLQGVIFAILNPWVAIGILLLLAFFATYMTA
Ga0335082_1095254823300032782SoilVTFRKYLVLAGITVFAAAGDSMLSHGMKQTGSISLHHLQNVILAVLNPWV
Ga0335079_1009907713300032783SoilLTLRKYLVLAGVAVFGAAGDSMLAHGMKQVGRISIHHLQEVVLAVLN
Ga0335083_1033998313300032954SoilLTLRKYLVLAGVAVFGAAGDSMLAHGMKQVGRISIHHLQEVVLAVLNPW
Ga0326727_1047887513300033405Peat SoilVTFRKYLVLAGVTVFSAAGDSMLSYGMKQTGNISLHHLGSVIVAVFNPW


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.