Metagenome Family F084354

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084354
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	73 residues
Representative Sequence	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK
Number of Associated Samples	54
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	80.36 %
% of genes near scaffold ends (potentially truncated)	26.79 %
% of genes from short scaffolds (< 2000 bps)	91.96 %
Associated GOLD sequencing projects	47
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (47.321 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (36.607 % of family members)
Environment Ontology (ENVO)	Unclassified (94.643 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (97.321 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84 1GOS2240_10301116 2GOS2240_10321761 3GOS2240_10338363 4JGI25127J35165_10420353 5Ga0066845_102678972 6Ga0066830_100194495 7Ga0066830_100784892 8Ga0066830_100824001 9Ga0066865_101212372 10Ga0066865_101750812 11Ga0066835_100690113 12Ga0066835_101212692 13Ga0066835_102731521 14Ga0066835_103683411 15Ga0066840_100612031 16Ga0066840_100645363 17Ga0066840_101264232 18Ga0066377_102828221 19Ga0066364_103607132 20Ga0066370_101512284 21Ga0066370_103247971 22Ga0066370_103497542 23Ga0068468_11344564 24Ga0099675_10277714 25Ga0099675_10377831 26Ga0099675_13566996 27Ga0099675_13859043 28Ga0099675_14026912 29Ga0068495_11532973 30Ga0099693_10193886 31Ga0099693_13313174 32Ga0099693_14125684 33Ga0099693_14529232 34Ga0099693_16438722 35Ga0099954_10577016 36Ga0099954_13364742 37Ga0099954_13741242 38Ga0099954_13785182 39Ga0099954_13996891 40Ga0099954_14690451 41Ga0099953_10295854 42Ga0099953_13641071 43Ga0099953_13829581 44Ga0099953_15512144 45Ga0099963_10202244 46Ga0099963_10364824 47Ga0099963_13365754 48Ga0115012_104374055 49Ga0115012_116826492 50Ga0137784_12157701 51Ga0160422_100783586 52Ga0160422_102291874 53Ga0160422_102780793 54Ga0160422_103948102 55Ga0160422_108836931 56Ga0163110_102848501 57Ga0163110_107827703 58Ga0163110_109889902 59Ga0163110_111349592 60Ga0163110_114833682 61Ga0211700_10192654 62Ga0211586_10370842 63Ga0211534_10451802 64Ga0211484_10200004 65Ga0211615_10537611 66Ga0211589_10553074 67Ga0211703_101062444 68Ga0211703_101347533 69Ga0211703_101416872 70Ga0211498_100317222 71Ga0211590_101905191 72Ga0211617_102384352 73Ga0211617_102992712 74Ga0211668_100384452 75Ga0211651_103290173 76Ga0211580_102488271 77Ga0211580_104709642 78Ga0211620_101954764 79Ga0211536_102631471 80Ga0211565_100492002 81Ga0211708_101364253 82Ga0211708_103447082 83Ga0211708_104742261 84Ga0211539_104075672 85Ga0211539_104286682 86Ga0211539_104728191 87Ga0211539_104747932 88Ga0211559_104804151 89Ga0211574_101336532 90Ga0211638_103440144 91Ga0211535_101604584 92Ga0211535_101604851 93Ga0211713_102028602 94Ga0209348_10422081 95Ga0209348_10432412 96Ga0209348_10475092 97Ga0209348_11591421 98Ga0209348_11796713 99Ga0209645_10198845 100Ga0208878_11056292 101Ga0208763_10388462 102Ga0208127_10527135 103Ga0207985_10170123 104Ga0207985_10250561 105Ga0207985_10912392 106Ga0207993_10638802 107Ga0207993_11008212 108Ga0209036_10725762 109Ga0183748_10548483 110Ga0310343_104171512 111Ga0310343_106190712 112Ga0310343_108729731
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84 1GOS2240_10301116 2GOS2240_10321761 3Ga0099675_13859043 4Ga0099953_13829581 5Ga0211580_102488271
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84 1GOS2240_10301116 2GOS2240_10321761 3Ga0099675_13859043 4Ga0099953_13829581 5Ga0211580_102488271
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.73% β-sheet: 28.38% Coil/Unstructured: 41.89%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01050	MannoseP_isomer	2.68
PF01467	CTP_transf_like	1.79

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.68 %
Unclassified	root	N/A	47.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.32 %
Viruses	superkingdom	All Organisms → Viruses	52.68 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	23.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.68 %
Unclassified	root	N/A	47.32 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	23.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.68 %
Unclassified	root	N/A	47.32 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.68 %
Unclassified	root	N/A	47.32 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	23.21 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	23.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.68 %
Unclassified	root	N/A	47.32 %

Name	Rank	Taxonomy	Distribution
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	21.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.68 %
Unclassified	root	N/A	47.32 %

Name	Rank	Taxonomy	Distribution
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	21.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.68 %
Unclassified	root	N/A	47.32 %

Name	Rank	Taxonomy	Distribution
Eurybiavirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Eurybiavirus	12.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.68 %
Salacisavirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Salacisavirus	6.25 %
Unclassified	root	N/A	47.32 %

Name	Rank	Taxonomy	Distribution
Eurybiavirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Eurybiavirus	12.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	27.68 %
Prochlorococcus virus PSSM2	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Salacisavirus → Prochlorococcus virus PSSM2	6.25 %
Unclassified	root	N/A	47.32 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001961\|GOS2240_1030111	All Organisms → Viruses → Predicted Viral	1843	Open in IMG/M
3300001961\|GOS2240_1032176	Not Available	1921	Open in IMG/M
3300001961\|GOS2240_1033836	All Organisms → Viruses → Predicted Viral	1622	Open in IMG/M
3300002482\|JGI25127J35165_1042035	All Organisms → Viruses → Predicted Viral	1014	Open in IMG/M
3300005432\|Ga0066845_10267897	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Eurybiavirus	660	Open in IMG/M
3300005433\|Ga0066830_10019449	All Organisms → Viruses → Predicted Viral	1327	Open in IMG/M
3300005433\|Ga0066830_10078489	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Salacisavirus → Prochlorococcus virus PSSM2	690	Open in IMG/M
3300005433\|Ga0066830_10082400	Not Available	675	Open in IMG/M
3300005523\|Ga0066865_10121237	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Eurybiavirus	958	Open in IMG/M
3300005523\|Ga0066865_10175081	Not Available	800	Open in IMG/M

Showing 1 to 10 of 112 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.68%
Oceanic	Environmental → Aquatic → Marine → Oceanic	60.71%
Unclassified	Environmental → Aquatic → Marine → Unclassified	36.61%

Habitat	Taxonomy	Distribution
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	32.14%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	36.61%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	28.57%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.68%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	36.61%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	25.89%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	22.32%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	2.68%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.89%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	4.46%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	2.68%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	4.46%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001961	Marine microbial communities from Dirty Rock, Cocos Island, Costa Rica - GS025	Environmental	Open in IMG/M
3300002482	Marine viral communities from the Pacific Ocean - ETNP_2_30	Environmental	Open in IMG/M
3300005432	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV78	Environmental	Open in IMG/M
3300005433	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF45B	Environmental	Open in IMG/M
3300005523	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265	Environmental	Open in IMG/M
3300005606	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84	Environmental	Open in IMG/M
3300005608	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF84A	Environmental	Open in IMG/M
3300005934	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_SurfaceB_ad_5m_LV_B	Environmental	Open in IMG/M
3300005960	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_SurfaceA_ad_6m_LV_A	Environmental	Open in IMG/M
3300005971	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_SurfaceA_ad_5m_LV_A	Environmental	Open in IMG/M

Showing 1 to 10 of 54 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GOS2240_10301116	3300001961	Marine	MKNKFYIVTDIETHEKSDQIDWEILNCLGIWGIEGRNEADREVKLWEKVEEYLGTKLASL
GOS2240_10321761	3300001961	Marine	MKHKFYIVTDIETHEKSDQIEWEILNCYGLWGVKGRNEADRENKLWEKVEEYLGTKLASLTYEDNKPHALTAFK*
GOS2240_10338363	3300001961	Marine	MKNKFYIVTDIETHEKSSQIEWEILNCLGIWTVEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK*
JGI25127J35165_10420353	3300002482	Marine	MKHKFYIVTDIETHEKSDQIEWEILNCYGLWGVKGKSEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK*
Ga0066845_102678972	3300005432	Marine	MKHKFYIVTDIETHEKSDQIEWEILNCYGLWGVKGRNEADRENKLWEKVEEYLGTKLASLTYEHNKPHALTAFK*
Ga0066830_100194495	3300005433	Marine	MKHKFYIVTDIETHEKSDQIEWEILNCYGLWGVKGRNEADRENKLWEKVEEYLGTKLASLTYESNKPHALTAFK*
Ga0066830_100784892	3300005433	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK*
Ga0066830_100824001	3300005433	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWGIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK*
Ga0066865_101212372	3300005523	Marine	MKNKFYIVTDVETHEKSDQLEWEILNCLGIWTSEGRTEDERINNLWEKVEEYLGTKLASLTYEHNKPHALTAFK*
Ga0066865_101750812	3300005523	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWGIEGRNEADREVKLWEQVEEYLGTKLASLTYEHNKPHALTAFK*
Ga0066835_100690113	3300005606	Marine	MKNKFYIITDIETHEKSDQIEWEILNCLGIWSIKGRNEADREVKLWEQVEEYLGTKLASLTYEHNKPHALTAFK*
Ga0066835_101212692	3300005606	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWSIEGKNEADREVKLWEKVEEYLGTKLASLTYENNKPHALTAFM*
Ga0066835_102731521	3300005606	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWGIEGRNEADREVKLWEKVEEYLGTKLASL
Ga0066835_103683411	3300005606	Marine	DIETHEKSDQIEWEILNCYGLWGVKGKSEADREVKLWEKVEEYLGTKLASLTYESNKPHALTAFK*
Ga0066840_100612031	3300005608	Marine	IREGSSMKHKFYIVTDIETHEKSDQIEWEILNCYGLWGVKGRNEADREVKLWEKVEEYLGTKLASLTYEDNKPHALTAFK*
Ga0066840_100645363	3300005608	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYENNKPHALTAFM*
Ga0066840_101264232	3300005608	Marine	MKHKFYIVTDIETHEKSDQIEWEILNCYGLWGVKGRNEADREIKLWEKVEEYLGTKLASLTYEDNKPHALTAFK*
Ga0066377_102828221	3300005934	Marine	MRNKFYIVTDIETHEKSSQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPH
Ga0066364_103607132	3300005960	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWTIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK*
Ga0066370_101512284	3300005971	Marine	MKNKFYIVTDIETHEKTSQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK*
Ga0066370_103247971	3300005971	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWSIKGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK*
Ga0066370_103497542	3300005971	Marine	MKNKFYIVTDVETHEKSDQIEWEILNCLGIWTIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK*
Ga0068468_11344564	3300006305	Marine	MKNKFYIVTDIETHEKSSQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK*
Ga0099675_10277714	3300006334	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYENNKPHALTAFK*
Ga0099675_10377831	3300006334	Marine	MKNKFYIVTEIETHEKSSQIEWEILNCLGIWTIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK*
Ga0099675_13566996	3300006334	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWTIEGRNEEDREVKLWEKIEEYLGTKLASLTYENNKPHALTAYM*
Ga0099675_13859043	3300006334	Marine	MKNKFYIVSNIETYAKSSQIEWEILNCLGIWDISGRNEAERENELWRMVEEYLGTKVKSLEYEDNKPHALT
Ga0099675_14026912	3300006334	Marine	MRNKFYIVTDIETHEKSDQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYENNKPHALTAYM*
Ga0068495_11532973	3300006337	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWTIEGRNEADREVKLWEKVEEYLGTKLASLTYENNKPHALTAFM*
Ga0099693_10193886	3300006345	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWSIEGRNEADREVKLWEQVEEYLGTKLASLTYENNKPHALTAYM*
Ga0099693_13313174	3300006345	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWSIEGRNEADRENKLWEKVEEYLGTKLASLTYEHNKPHALTAFK*
Ga0099693_14125684	3300006345	Marine	MKNKFYIITDIETHEKSDQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYENNKPHALTAYM*
Ga0099693_14529232	3300006345	Marine	MKNKFYIITDIETHEKSDQIEWEILNCLGIWTVEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK*
Ga0099693_16438722	3300006345	Marine	MKNKFYIVSNIETYAKSDQIEWEILNCLGIWGIDGRNEADREVKFWEQVEEYLGTKLASLTYENNKPHALTAYM*
Ga0099954_10577016	3300006350	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWTIEGRNEADREVKLWEKVEEYLGTKLASLTYENNKPHVLTSFM*
Ga0099954_13364742	3300006350	Marine	MKNKFYIITDIETHEKSDQIEWEILNCLGIWTIEGRNEEDREVKLWEKIEEYLGTKLASLTYENNKPHALTAYM*
Ga0099954_13741242	3300006350	Marine	MKNKFYIVTEIETHEKSSQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK*
Ga0099954_13785182	3300006350	Marine	SMKNKFYIVTDIETHEKSDQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFSRQFN*
Ga0099954_13996891	3300006350	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGNWTIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK*
Ga0099954_14690451	3300006350	Marine	MKNKFYIVTEIETHEKSSQIEWEILNCLGIWTVEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK*
Ga0099953_10295854	3300006351	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWGIEGRNEADREVKLWEQVEEYLGTKLASLTYENNKPHALTAYM*
Ga0099953_13641071	3300006351	Marine	MKNKFYIVTDIETHENSSQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYENNKPHALTAYM*
Ga0099953_13829581	3300006351	Marine	HEKSDQIEWEILNCLGIWTIEGRNEADREVKLWEKVEEYLGTKLASLTYEDNKPHALTAFK*
Ga0099953_15512144	3300006351	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWSIKGRNEADRENKLWEKVEEYLGTKLASLTYEHNKPHALTAFK*
Ga0099963_10202244	3300006413	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYENNKPHALTAYM*
Ga0099963_10364824	3300006413	Marine	MNNKFYIVSNIETYAKSSQIEWEILNCLGIWDISGRNEAERENELWRMVEEYLGTKVKSLEYEDNKPHALTAFK*
Ga0099963_13365754	3300006413	Marine	MKNKFYIVTDIETHEKTSQIEWEILNCLGIWNIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK*
Ga0115012_104374055	3300009790	Marine	RRSGSMKNKFYIVTDIETHEKSSQIEWEILNCLGIWTVEGRDEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK*
Ga0115012_116826492	3300009790	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNK
Ga0137784_12157701	3300010936	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLAILTYENNKPHALTAFM*
Ga0160422_100783586	3300012919	Seawater	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWGIEGRNEADREVKLWEKVEEYLGTKLASLTYEDNKPHALTAFK*
Ga0160422_102291874	3300012919	Seawater	MKNKFYIVTDIETHEKSDQLEWEILNCLGIWSIEGRNEEDREVKLWEKVEEYLGTKLASLTYENNKPHALTAFM*
Ga0160422_102780793	3300012919	Seawater	VKSKFVIVSDIETYEKSDQIEWEILNCLGIWTLEGRNEAERENKLWDKVEEYLGTKIKSLTYEDNKPHALTAFK*
Ga0160422_103948102	3300012919	Seawater	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWTIEGRNEADREVKLWEKVEEYLGTKLASLTYEDNKPHALTAFK*
Ga0160422_108836931	3300012919	Seawater	MKYKFYIVTDIETHEKSDQLEWEILNCLGIWSIEGRNEADRENKLWEKVEEYLGTKLASLTYENNKPHALTA
Ga0163110_102848501	3300012928	Surface Seawater	MKNKFYIVTDVETHEKSSQIEWEILNCLGIWSIEGKSEADREVKLWEKVEEYLGTKLASLTYESNKPHALTAFK*
Ga0163110_107827703	3300012928	Surface Seawater	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYENNKPH
Ga0163110_109889902	3300012928	Surface Seawater	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYENNKPHGLTAFM*
Ga0163110_111349592	3300012928	Surface Seawater	MKNKFYIVTDVETHEKSDQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK*
Ga0163110_114833682	3300012928	Surface Seawater	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWGIEGRNEADREVKLWEKVEEYLGTKLASLTYEHN
Ga0211700_10192654	3300020251	Marine	HEKSDQIEWEILNCLGIWTIEGRNEADREVKLWEKVEEYLGTKLASLTYENNKPHALTAY
Ga0211586_10370842	3300020255	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYEDNKPHALTAFK
Ga0211534_10451802	3300020261	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWTIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK
Ga0211484_10200004	3300020269	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWGIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK
Ga0211615_10537611	3300020299	Marine	NKFYIVTDIETHEKSDQIEWEILNCLGIWTIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK
Ga0211589_10553074	3300020315	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK
Ga0211703_101062444	3300020367	Marine	MKNKFYIITDIETHEKSDQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYENNKPHALTAYM
Ga0211703_101347533	3300020367	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCYGIWTSEGRTEDERINNLWEKVEEYLGTKLASLTYENNKPHALTAYM
Ga0211703_101416872	3300020367	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWSIKGRNEADRENKLWEKVEEYLGTKLASLTYEHNKPHALTAFK
Ga0211498_100317222	3300020380	Marine	MKSKFVIVSDIETYEKSDQIEWEILNCLGIWTLEGRNEAERENKLWEKVEEYLGTKIKSLTYEDNKPHALTAFK
Ga0211590_101905191	3300020387	Marine	HEKSDQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYENNKPHALTAY
Ga0211617_102384352	3300020401	Marine	MKNKFYIVTDIETHEKSSQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK
Ga0211617_102992712	3300020401	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYENNKPHALTAFM
Ga0211668_100384452	3300020406	Marine	MKNKFYIVSDIETYEKSDQLEWEILNCLGIWTVEGRSEADRENKLWGKVEEYLGTKVKSLEYEDNKPHALTAFM
Ga0211651_103290173	3300020408	Marine	VTDIETHEKSDQIEWEILNCYGLWGVKGRNEADREIKLWEKVEEYLGTKLASLTYESNKPHALTAFK
Ga0211580_102488271	3300020420	Marine	MNKSYIVTNIETHEQSDQIEWEILNCLGIWNVEGVSKYSREVKLWEMVEEYLGTKLKSLEFES
Ga0211580_104709642	3300020420	Marine	MKNKFYIVTDIETHEKSSQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYE
Ga0211620_101954764	3300020424	Marine	CGSMKNKFYIVTDIETHEKSDQIEWEILNCLGIWGIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK
Ga0211536_102631471	3300020426	Marine	MKSKFVIVSDIETYEKSDQIEWEILNCLGIWTLEGRNEAERENKLWEKVEEYLGTKIKSLTYEDNKPHALTA
Ga0211565_100492002	3300020433	Marine	MKNKFYIVTDVETHEKSSQIEWEILNCLGIWSIEGRNEADRENKLWEKVEEYLGTKLASLTYEHNKPHALTAFK
Ga0211708_101364253	3300020436	Marine	MKNKFYIVTDIETHEKTSQIEWEILNCYGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK
Ga0211708_103447082	3300020436	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWSIKGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK
Ga0211708_104742261	3300020436	Marine	LRSGSMKNKFYIVTDIETHEKSDQIEWEILNCLGIWTIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK
Ga0211539_104075672	3300020437	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWSIEGRNEEDREVKLWEKVEEYLGTKLASLTYENNKPHALTAFM
Ga0211539_104286682	3300020437	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWTVEGRNEADREVKLWEKVEEYLGTKLASLTYEDNKPHALTAFM
Ga0211539_104728191	3300020437	Marine	ETYEKSDQIEWEILNCLGIWTLEGRNEAERENKLWNKVEEYLGTKIKSLTYEDNKPHALTAFK
Ga0211539_104747932	3300020437	Marine	MKNKFYIVTDIETHEKSSQIEWEILNCLGIWTSEGRTEDERINNLWEKVEEYLGTKLASLTYEHNKPHALTAFK
Ga0211559_104804151	3300020442	Marine	MKNKFYIVTDIETHEKSSQIEWEILNCLGIWGVEGKNEADREVKLWEKVEEYLGTKLASLTYESNKPHA
Ga0211574_101336532	3300020446	Marine	MKHKFYIVTDIETHEKSDQIEWEILNCYGLWGVKGRNEADREIKLWEKVEEYLGTKLASLTYESNKPHALTAFK
Ga0211638_103440144	3300020448	Marine	SMKNKFYIVTDIETHEKSDQIEWEILNCLGIWTIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK
Ga0211535_101604584	3300020461	Marine	MKNKFYIVTDIETHEKSSQIEWEILNCLGIWTVEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK
Ga0211535_101604851	3300020461	Marine	MKNKFYIVTDIETHEKSSQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYENNKPHALTAFM
Ga0211713_102028602	3300020467	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWTIEGRNEADREVKLWEKVEEYLGTKLASLTYENNKPHALTAYM
Ga0209348_10422081	3300025127	Marine	MKHKFYIVTDIETHEKSDQIEWEILNCYGLWGVKGKSEADREVKLWEKVEEYLGTKLASLTYESNKPHALTAFK
Ga0209348_10432412	3300025127	Marine	MKSKFVIVSDIETYEKSDQIEWEILNCLGIWTLEGRNEAERENKLWKKVEEYLGTKIKSLTYEDNKPHALTAFK
Ga0209348_10475092	3300025127	Marine	MKNKFYIITDIETHEKSDQIEWEILNCLGIWSIKGRNEADREVKLWEQVEEYLGTKLASLTYEHNKPHALTAFK
Ga0209348_11591421	3300025127	Marine	IVTDIETHEKSDQIEWEILNCYGLWGVKGRNEADREVKLWEKVEEYLGTKLASLTYEDNKPHALTAFK
Ga0209348_11796713	3300025127	Marine	KHKFYIVTDIETHEKSDQIEWEILNCYGLWGVKGKSEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK
Ga0209645_10198845	3300025151	Marine	MKHKFYIVTDIETHEKSDQIEWEILNCYGLWGVKGKNEADREVKLWEKVEEYLGTKLASLTYEDNKPHALTAFK
Ga0208878_11056292	3300026083	Marine	MKNKFYIVTDVETHEKSDQIEWEILNCLGIWTIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK
Ga0208763_10388462	3300026136	Marine	MKHKFYIVTDIETHEKSDQIEWEILNCYGLWGVKGRNEADRENKLWEKVEEYLGTKLASLTYEDNKPHALTAFK
Ga0208127_10527135	3300026201	Marine	MKHKFYIVTDIETHEKSDQIEWEILNCYGLWGVKGRNEADREVKLWEQVEEYLGTKLASLTYESNKPHALTAFK
Ga0207985_10170123	3300026203	Marine	MKHKFYIVTDIETHEKSDQIEWEILNCYGLWGVKGKSEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK
Ga0207985_10250561	3300026203	Marine	KFYIVTDIETHEKSDQIEWEILNCLGIWGIEGRNEADREVKLWEQVEEYLGTKLASLTYEHNKPHALTAFK
Ga0207985_10912392	3300026203	Marine	MKNKFYIVTDIETHEKSSQIEWEILNCLGIWSIEGKNEADREVKLWEKVEEYLGTKLASLTYENNKPHALTAFM
Ga0207993_10638802	3300026270	Marine	MKNKFYIVTDVETHEKSDQLEWEILNCLGIWTSEGRTEDERINNLWEKVEEYLGTKLASLTYEHNKPHALTAFK
Ga0207993_11008212	3300026270	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWGIEGRNEADREVKLWEQVEEYLGTKLASLTYEHNKPHALTAFK
Ga0209036_10725762	3300027702	Marine	MKNKFYIITDIETHEKSDQIEWEILNCLGIWTIEGRNEADREVKLWEKVEEYLGTKLASLTYESNKPHALTAFK
Ga0183748_10548483	3300029319	Marine	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWGIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHA
Ga0310343_104171512	3300031785	Seawater	MKNKFYIVTDIETHEKSDQIEWEILNCLGIWSIEGRNEADREVKLWEKVEEYLGTKLASLTYENNKPHALTAYM
Ga0310343_106190712	3300031785	Seawater	MKNKFYIVTDIETHEKTSQIEWEILNCLGIWNIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK
Ga0310343_108729731	3300031785	Seawater	MKNKFYIITDIETHEKSDQIEWEILNCLGIWTIEGRNEADREVKLWEKVEEYLGTKLASLTYEHNKPHALTAFK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F084354

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences