Metagenome Family F084336

Overview

Basic Information

• Family ID: F084336
• Family Type: Metagenome
• Number of Sequences: 112
• Average Sequence Length: 41 residues
• Representative Sequence: MESKLYTYLQLPDDYWTITTTMDVDVQYEQEDESN
• Number of Associated Samples: 61
• Number of Associated Scaffolds: 112

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 91.07 %
• % of genes near scaffold ends (potentially truncated): 16.07 %
• % of genes from short scaffolds (< 2000 bps): 91.07 %
• Associated GOLD sequencing projects: 50
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (59.821 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (73.214 % of family members)
• Environment Ontology (ENVO): Unclassified (96.429 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline) (93.750 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 0.00%
  β-sheet: 0.00%
  Coil/Unstructured: 100.00%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF03796	DnaB_C	11.61
PF04266	ASCH	7.14
PF00154	RecA	0.89
PF00856	SET	0.89
PF00085	Thioredoxin	0.89
PF00694	Aconitase_C	0.89
PF01041	DegT_DnrJ_EryC1	0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	11.61
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	11.61
COG2411	Predicted RNA-binding protein, contains PUA-like ASCH domain	General function prediction only [R]	7.14
COG3097	Uncharacterized conserved protein YqfB, UPF0267 family	Function unknown [S]	7.14
COG4405	Predicted RNA-binding protein YhfF, contains PUA-like ASCH domain	General function prediction only [R]	7.14
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.89
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.89
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.89
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.89
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.89
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.89
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.89

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.82 %
All Organisms	root	All Organisms	40.18 %

Level 2

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.82 %
cellular organisms	root	All Organisms → cellular organisms	31.25 %
Viruses	superkingdom	All Organisms → Viruses	8.93 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.14 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.79 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	7.14 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.79 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300002484|JGI25129J35166_1014116	All Organisms → cellular organisms → Bacteria → Proteobacteria	1974
3300002484|JGI25129J35166_1087233	Not Available	558
3300002514|JGI25133J35611_10037492	All Organisms → cellular organisms → Bacteria → Proteobacteria	1748
3300002514|JGI25133J35611_10118545	Not Available	758
3300002514|JGI25133J35611_10197553	Not Available	529
3300002519|JGI25130J35507_1066384	Not Available	688
3300002519|JGI25130J35507_1068461	Not Available	674
3300003539|FS891DNA_10424278	Not Available	854
3300005423|Ga0066828_10158658	All Organisms → cellular organisms → Bacteria → Proteobacteria	760
3300005426|Ga0066847_10183930	Not Available	641
3300005427|Ga0066851_10240128	Not Available	565
3300005603|Ga0066853_10090183	Not Available	1046
3300005603|Ga0066853_10257796	Not Available	575
3300005604|Ga0066852_10138496	Not Available	856
3300005948|Ga0066380_10081773	All Organisms → cellular organisms → Bacteria → Proteobacteria	941
3300006093|Ga0082019_1086793	Not Available	536
3300006331|Ga0068488_1220023	Not Available	570
3300006339|Ga0068481_1166266	Not Available	1252
3300006340|Ga0068503_10303102	All Organisms → Viruses → Predicted Viral	3082
3300006340|Ga0068503_10471744	Not Available	1508
3300006340|Ga0068503_10676233	Not Available	765
3300006340|Ga0068503_10869157	Not Available	584
3300006347|Ga0099697_1495870	Not Available	602
3300006414|Ga0099957_1175626	Not Available	2515
3300006565|Ga0100228_1281452	Not Available	722
3300006736|Ga0098033_1052551	All Organisms → cellular organisms → Bacteria → Proteobacteria	1194
3300006736|Ga0098033_1060562	Not Available	1103
3300006736|Ga0098033_1215644	Not Available	530
3300006738|Ga0098035_1001710	All Organisms → cellular organisms → Bacteria	10523
3300006738|Ga0098035_1070995	Not Available	1241
3300006738|Ga0098035_1151270	Not Available	789
3300006738|Ga0098035_1177825	Not Available	716
3300006738|Ga0098035_1178883	All Organisms → cellular organisms → Bacteria → Proteobacteria	713
3300006750|Ga0098058_1068280	All Organisms → cellular organisms → Bacteria → Proteobacteria	984
3300006750|Ga0098058_1118048	All Organisms → cellular organisms → Bacteria → Proteobacteria	711
3300006750|Ga0098058_1149461	Not Available	618
3300006751|Ga0098040_1021246	All Organisms → Viruses → Predicted Viral	2121
3300006753|Ga0098039_1114227	All Organisms → cellular organisms → Bacteria → Proteobacteria	928
3300006753|Ga0098039_1119402	All Organisms → cellular organisms → Bacteria → Proteobacteria	905
3300006753|Ga0098039_1170642	Not Available	741
3300006753|Ga0098039_1321864	All Organisms → cellular organisms → Bacteria → Proteobacteria	515
3300006754|Ga0098044_1129766	All Organisms → cellular organisms → Archaea	1019
3300006754|Ga0098044_1283111	Not Available	637
3300006754|Ga0098044_1408907	Not Available	510
3300006926|Ga0098057_1092750	Not Available	736
3300006926|Ga0098057_1120315	All Organisms → cellular organisms → Bacteria → Proteobacteria	640
3300006926|Ga0098057_1128167	Not Available	619
3300006927|Ga0098034_1027099	All Organisms → cellular organisms → Bacteria → Proteobacteria	1740
3300006927|Ga0098034_1045657	All Organisms → cellular organisms → Bacteria → Proteobacteria	1299
3300006927|Ga0098034_1085843	Not Available	907
3300006927|Ga0098034_1156738	All Organisms → cellular organisms → Archaea	641
3300006927|Ga0098034_1164271	All Organisms → cellular organisms → Bacteria → Proteobacteria	624
3300006927|Ga0098034_1225849	Not Available	519
3300007765|Ga0105010_1118772	Not Available	789
3300007777|Ga0105711_1186894	All Organisms → cellular organisms → Bacteria → Proteobacteria	523
3300008216|Ga0114898_1037898	Not Available	1582
3300008219|Ga0114905_1233660	Not Available	583
3300009605|Ga0114906_1232557	Not Available	607
3300010151|Ga0098061_1130356	Not Available	921
3300010151|Ga0098061_1145018	Not Available	863
3300010151|Ga0098061_1333376	Not Available	518
3300010155|Ga0098047_10218914	Not Available	727
3300010155|Ga0098047_10272787	Not Available	641
3300017703|Ga0181367_1050335	Not Available	734
3300017703|Ga0181367_1083360	All Organisms → cellular organisms → Bacteria → Proteobacteria	551
3300017703|Ga0181367_1086607	Not Available	539
3300017718|Ga0181375_1012311	Not Available	1492
3300017775|Ga0181432_1110328	Not Available	825
3300017775|Ga0181432_1204951	Not Available	618
3300020423|Ga0211525_10454318	Not Available	518
3300021442|Ga0206685_10163004	All Organisms → cellular organisms → Bacteria → Proteobacteria	746
3300021978|Ga0232646_1075201	All Organisms → Viruses → Predicted Viral	1148
3300022225|Ga0187833_10639066	Not Available	523
3300022227|Ga0187827_10029041	All Organisms → Viruses	4839
3300022227|Ga0187827_10208924	All Organisms → cellular organisms → Bacteria → Proteobacteria	1320
3300022227|Ga0187827_10226262	Not Available	1252
3300025046|Ga0207902_1037306	Not Available	602
3300025072|Ga0208920_1004779	All Organisms → Viruses → Predicted Viral	3194
3300025097|Ga0208010_1022216	Not Available	1536
3300025097|Ga0208010_1049854	All Organisms → cellular organisms → Bacteria → Proteobacteria	933
3300025097|Ga0208010_1107357	Not Available	570
3300025109|Ga0208553_1036785	All Organisms → cellular organisms → Bacteria → Proteobacteria	1243
3300025112|Ga0209349_1018581	All Organisms → cellular organisms → Bacteria → Proteobacteria	2496
3300025112|Ga0209349_1043332	All Organisms → Viruses → Predicted Viral	1440
3300025112|Ga0209349_1063469	Not Available	1120
3300025112|Ga0209349_1099845	All Organisms → cellular organisms → Bacteria → Proteobacteria	830
3300025112|Ga0209349_1138096	All Organisms → cellular organisms → Bacteria → Proteobacteria	665
3300025112|Ga0209349_1195967	Not Available	518
3300025114|Ga0208433_1053685	Not Available	1065
3300025118|Ga0208790_1079082	All Organisms → cellular organisms → Bacteria → Proteobacteria	985
3300025122|Ga0209434_1068558	All Organisms → cellular organisms → Bacteria → Proteobacteria	1059
3300025122|Ga0209434_1107707	All Organisms → cellular organisms → Bacteria → Proteobacteria	791
3300025125|Ga0209644_1093660	Not Available	708
3300025131|Ga0209128_1160449	Not Available	665
3300025131|Ga0209128_1172895	Not Available	630
3300025131|Ga0209128_1193589	Not Available	578
3300025131|Ga0209128_1195758	All Organisms → cellular organisms → Bacteria → Proteobacteria	573
3300025141|Ga0209756_1013129	All Organisms → Viruses	5259
3300025141|Ga0209756_1038809	All Organisms → Viruses → Predicted Viral	2454
3300025141|Ga0209756_1239445	All Organisms → cellular organisms → Bacteria → Proteobacteria	671
3300025141|Ga0209756_1248146	All Organisms → cellular organisms → Bacteria → Proteobacteria	654
3300025268|Ga0207894_1077114	Not Available	567
3300025305|Ga0208684_1030993	Not Available	1584
3300025873|Ga0209757_10186193	All Organisms → cellular organisms → Bacteria → Proteobacteria	655
3300026199|Ga0208638_1178997	Not Available	552
3300026209|Ga0207989_1099679	Not Available	724
3300026259|Ga0208896_1019006	All Organisms → Viruses → Predicted Viral	2382
3300026268|Ga0208641_1058814	All Organisms → Viruses → Predicted Viral	1163
3300032278|Ga0310345_10668159	All Organisms → cellular organisms → Bacteria	1005
3300032360|Ga0315334_11812930	Not Available	518
3300032820|Ga0310342_100559752	Not Available	1288
3300032820|Ga0310342_102158458	Not Available	666

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Category

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Type

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	91.96%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	2.68%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.79%
Strait	Environmental → Aquatic → Marine → Strait	1.79%
Coastal	Environmental → Aquatic → Marine → Coastal	0.89%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.89%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	83.93%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	4.46%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	3.57%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.79%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	1.79%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	0.89%

Habitat

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	73.21%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	6.25%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	4.46%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	4.46%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	3.57%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.79%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	1.79%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.89%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.89%
Diffuse Hydrothermal Flow Volcanic Vent	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent	0.89%
Diffuse Vent Fluid, Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Vent Fluid, Hydrothermal Vents	0.89%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Fluids	0.89%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300002484	Marine viral communities from the Pacific Ocean - ETNP_2_130	Environmental
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental
3300002519	Marine viral communities from the Pacific Ocean - ETNP_2_300	Environmental
3300003539	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS891_Anemone_DNA	Environmental
3300005423	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV47	Environmental
3300005426	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV74	Environmental
3300005427	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65	Environmental
3300005603	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV61	Environmental
3300005604	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63	Environmental
3300005948	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_O2min_ad_571m_LV	Environmental
3300006093	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP189	Environmental
3300006331	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT233_1_1000m	Environmental
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental
3300006340	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0770m	Environmental
3300006347	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT224_1_1000m	Environmental
3300006414	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0500m	Environmental
3300006565	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_2_0125m	Environmental
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental
3300006926	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG	Environmental
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental
3300007765	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 2.7-0.2um, replicate b	Environmental
3300007777	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS918_NRZ_DNA CLC_assembly	Environmental
3300008216	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar	Environmental
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental
3300017703	Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaG	Environmental
3300017718	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaG	Environmental
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental
3300020423	Marine microbial communities from Tara Oceans - TARA_B100000315 (ERX556027-ERR599062)	Environmental
3300021442	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015	Environmental
3300021978	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Perseverance_CTD_V16A_01_btl17 _150kmer	Environmental
3300022225	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)	Environmental
3300022227	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)	Environmental
3300025046	Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)	Environmental
3300025072	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)	Environmental
3300025097	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)	Environmental
3300025109	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)	Environmental
3300025112	Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)	Environmental
3300025114	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)	Environmental
3300025118	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)	Environmental
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental
3300025131	Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)	Environmental
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental
3300025268	Marine viral communities from the Deep Pacific Ocean - MSP-114 (SPAdes)	Environmental
3300025305	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)	Environmental
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental
3300026199	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV51 (SPAdes)	Environmental
3300026209	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65 (SPAdes)	Environmental
3300026259	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63 (SPAdes)	Environmental
3300026268	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F10-02SV253 (SPAdes)	Environmental
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental
3300032360	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915	Environmental
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25129J35166_10141162	3300002484	Marine	MEMEIKKMESSLYTYLQLPDDYWTITTTMDSDFEYTITDTEDESK*
JGI25129J35166_10872331	3300002484	Marine	MEKIMESKLYTYLQLPDDYWTITTTMDIDVQYEQEDESN*
JGI25133J35611_100374924	3300002514	Marine	MKNITEKTMESKLYTYLQLPDDYWTITTNMDVDVHYEQEDESN*
JGI25133J35611_101185452	3300002514	Marine	MEMIKMESSLYTYLQLPDDYWTITTTMDSDFEYTITDTEDESK*
JGI25133J35611_101975531	3300002514	Marine	MKNFTEKTMESKLYTYLXLPDDYWTITTTMDIDVQYXQEDESN*
JGI25130J35507_10663842	3300002519	Marine	MIKMESSLYTYLQLPDDYWTITTTMDSDFEYTITDTEDEDK*
JGI25130J35507_10684612	3300002519	Marine	MKNITEKTMESKLYTYLQLPDDYWTITTTMDVDVQYEQEDESN*
FS891DNA_104242782	3300003539	Diffuse Hydrothermal Flow Volcanic Vent	MEMEIKKMEHNLYTYLQLPDDYWVITTTMDVEIEYLEQEDESN*
Ga0066828_101586583	3300005423	Marine	MEMEIKKMESSLYTYLQLPDDYWTITTTMDVDVHYEQEDESN*
Ga0066847_101839302	3300005426	Marine	MEMEIKKMESSLYTYLQLPDDYWTITTTMDSDFEYTITDTEDESN*
Ga0066851_102401282	3300005427	Marine	MKNITEKTVESKLYTYLQLPDDYWTITTNMDVDVHYEQEDESN*
Ga0066853_100901833	3300005603	Marine	MESKLYTYLQLPDDYWTITTTMDVDVQYEQEDESN*
Ga0066853_102577961	3300005603	Marine	MESSLYTYLQLPDDYWTITTTMDSDFEYTITDTEDESN*
Ga0066852_101384963	3300005604	Marine	MESKLYTYLQLPDDYWTITTTMDVDVHYEQEDESN*
Ga0066380_100817734	3300005948	Marine	MKNITEKTMESKLYTYLQLPDDYWTITTTMDVDVHYEQEDESN*LYSRTS*TK
Ga0082019_10867933	3300006093	Marine	MKNTMEKTMESKLYTYLQLPDDYWTITTTMDIDVQYEQEDESN*
Ga0068488_12200231	3300006331	Marine	MKNITEKTMESSLYTYLQLPDDYWTITTTMDVNIQYEQEDESN*
Ga0068481_11662664	3300006339	Marine	MESSLYTYLQLPDDYWTITTTMDSDFEYTITDTEDESK*
Ga0068503_103031024	3300006340	Marine	MESSLYTYLQLPDDYWTITTTMDVDVHYEQEDESN*
Ga0068503_104717444	3300006340	Marine	MKNITEKTMESKLYTYLQLPDDYWTITTNMDVDVQYEQEDESN*
Ga0068503_106762332	3300006340	Marine	MEMEIKKMESSLYTYLQLPDDYWTITTTMDIDVQYEQEDESN*
Ga0068503_108691572	3300006340	Marine	MKNITEKTMESSLYTYLQLPDDYWTITTTMDSDFEYTITDTEDESN*
Ga0099697_14958702	3300006347	Marine	MEMEIKKMESSLYTYLQLPDDYWTITTTMDVDVHYEQEDKSN*
Ga0099957_11756261	3300006414	Marine	MKNITEKTMESKLYTYLQLPDDYWTITTNMDIEFQYEQEDESN*
Ga0100228_12814522	3300006565	Marine	MKNFMEKKKMESKLYKYLQLPDDYWTITTNMDIEFQYEQEDESK*
Ga0098033_10525512	3300006736	Marine	MESSLYTYLQLPDDYWTITTTMDSDFEYTITDTEDEDK*
Ga0098033_10605623	3300006736	Marine	MESELYTYLQLPDDYWTITTTMDVDVQYEQEDESN*
Ga0098033_12156442	3300006736	Marine	MEMEIKKMDSSLYTYLQLPDDYWTITTTMDIDVQYEEDESK*
Ga0098035_100171013	3300006738	Marine	MKNTMEKTMESKLYTYLQLPDDYWTITTTMDIDVQYEEDESK*
Ga0098035_10709953	3300006738	Marine	MESKLYTYLQLPDDYWTITTTMDIDVQYEQEDESN*
Ga0098035_11512702	3300006738	Marine	GSYMKNLTEKKMDSQLYTYLQLPDDYWIITTTMDSDFEYTITDTEDEDK*
Ga0098035_11778252	3300006738	Marine	MKNITEKTMESKLYTYLQLPDDYWTITTTMDVDVQYEEDESN*
Ga0098035_11788832	3300006738	Marine	MEMEIKKMEKTESKLYTYLQLPDDYWIITTTMDSDFEYTITDMEDESK*
Ga0098058_10682804	3300006750	Marine	MIKMESSLYTYLQLPDDYWTITTTMDSDFEYTITDTEDESK*
Ga0098058_11180482	3300006750	Marine	MNLTEKTMESELYTYLQLPDDYWTITTTMDVDVQYEQEDESN*
Ga0098058_11494612	3300006750	Marine	MKNITEKKMESKLYTYFQLPDDYWTITTNMDIEFQYEQEDESN*
Ga0098040_10212463	3300006751	Marine	MKNLMEKTMENKLYTYLQLPDDYWTITTTMDIDVQYEEDESK*
Ga0098039_11142273	3300006753	Marine	MESKLYTYLQLPDDYWTITTTMDSDFEYTITDTEDESN*
Ga0098039_11194024	3300006753	Marine	MESSLYTYLQLPDDYWTITTTMDIDVQYEEDESN*
Ga0098039_11706421	3300006753	Marine	MEKKMEKTESKLYTYLQLPDDYWIITTTMDSDFEYTITDTEDEDK*
Ga0098039_13218641	3300006753	Marine	MESKLYTYLQLPDDYWTITTTMDVDVHYEQEDESN*LYSRTS
Ga0098044_11297662	3300006754	Marine	MKNKTEKKMESKLYKYLQLPDDYWTITTNMDIDVQYEQEDESN*
Ga0098044_12831112	3300006754	Marine	MESSLYTYLQLPDDYWTITTTMDYDFEYVMLDNKEDEDK*
Ga0098044_14089073	3300006754	Marine	MKNLMEKKMEKTESKLYTYLQLPDDYWIITTTMDSDFEYTITDTEDEDK*
Ga0098057_10927502	3300006926	Marine	MKNFTEKKMESSLYTYLQLPDDYWTITTTMDIDVQYEQEDESN*
Ga0098057_11203151	3300006926	Marine	MESSLYTYLQLPDDYWTITTTMDVDVQYEQEDESN
Ga0098057_11281671	3300006926	Marine	MESSLYTYLQLPDDYWTITTTMDVDVHYEQEDKSN*
Ga0098034_10270994	3300006927	Marine	MESKLYTYLQLPDDYWIITTTMDSDFEYTITDTEDESK*
Ga0098034_10456574	3300006927	Marine	MESELYTYLQLPDDYWTITTTMDIDVQYEQEDESN*
Ga0098034_10858432	3300006927	Marine	MKNLMEKKMENNLYTYLQLPDNYWTITTTMDVEVEYEEDESK*
Ga0098034_11567382	3300006927	Marine	MKNFTEKTMESKLYTYLQLPDDYWTITTTMDVDVQYEQEDESN*
Ga0098034_11642713	3300006927	Marine	MESKLYTYLQLPDNYWTITTTMDVDVQYEQEDESN*
Ga0098034_12258492	3300006927	Marine	YMKNFTEKTMESSLYTYLQLPDDYWTITTTMDVDVHYEQEDESN*
Ga0105010_11187723	3300007765	Marine	MENLYSYLQLPDDYWTITTTMDVEIEYQEEDESN*
Ga0105711_11868941	3300007777	Diffuse Vent Fluid, Hydrothermal Vents	MDSQLYTYLQFPDDYWTITTTMDSDFEYTITDTEDESN*LY
Ga0114898_10378984	3300008216	Deep Ocean	MEKDNLYTYLQLPDDYWIITTTMDVEIEYLDNENKDN*
Ga0114905_12336602	3300008219	Deep Ocean	MENKLYTYLQLPDDYWIITTTMDSDFEYTITDTEDGSK*
Ga0114906_12325571	3300009605	Deep Ocean	EKTEIYSYLQLPEDYWTITTNMDIEFQYEQEDESN*
Ga0098061_11303562	3300010151	Marine	MESKLYTYLQLPDDYWTITTTMDIDVQYEEDESK*
Ga0098061_11450182	3300010151	Marine	MDSLYTYLQLPDNYWIVTTTMDNSFEYVTTDEEDESK*
Ga0098061_13333763	3300010151	Marine	MESSLYTYLQLPDDYWTITTTMDIGVQYEQEDESN*LYSR
Ga0098047_102189142	3300010155	Marine	MESKLYTYLQLPDDYWTITTTMDVDVQYEEDESN*
Ga0098047_102727872	3300010155	Marine	MDSQLYTYLQLPDNYWTITTTMDVEVEYEEDESK*
Ga0181367_10503352	3300017703	Marine	MKNLMEKKMEKTESKLYTYLQLPDDYWIITTTMDSDFEYTITDTEDEDK
Ga0181367_10833603	3300017703	Marine	MESSLYTYLQLPDDYWTITTTMDIGVQYEQEDESNXLYS
Ga0181367_10866072	3300017703	Marine	MKNITEKKMESKLYTYFQLPDDYWTITTTMDVDVQYEQEDESN
Ga0181375_10123113	3300017718	Marine	MEMIKMESSLYTYLQLPDDYWTITTTMDIDVQYEEDESK
Ga0181432_11103283	3300017775	Seawater	MKNFMEEKKMDSQLYTYLQLPDDYWIITTTMDSDFEYTITDTEDEDK
Ga0181432_12049512	3300017775	Seawater	MNLTEKKMESKLYTYLQLPDDYWTITTTMDVDVHYEQEDENN
Ga0211525_104543182	3300020423	Marine	MKNITEKTMENKLYTYLQLPDDYWTITTTMDVDVHYEQEDENN
Ga0206685_101630042	3300021442	Seawater	MKNLTEKKMESSLYTYLQLPDDYWVITTTMDVDVQYEQEDESN
Ga0232646_10752012	3300021978	Hydrothermal Vent Fluids	MEMEIKKMESSLYTYLQLPDDYWTITTTMDSDFEYTITDTEDESN
Ga0187833_106390663	3300022225	Seawater	MKNFTEKTMESSLYTYLQLPDDYWTITTTMDVDVHYEQEDENN
Ga0187827_100290416	3300022227	Seawater	MESSLYTYLQLPDDYWTISTTMDSDFEYIIKENDE
Ga0187827_102089242	3300022227	Seawater	MESSLYTYLQLPDDYWTITTTMDSDFEYTITDTEDESK
Ga0187827_102262622	3300022227	Seawater	MESSLYTYLQLPDDYWTITTTMDSDFEYTITDTEDESN
Ga0207902_10373062	3300025046	Marine	MEKTKSKLYTYFQLPDDYWTITTNMDIEFQYEQEDESN
Ga0208920_10047794	3300025072	Marine	MKNTMEKTMESKLYTYLQLPDDYWTITTTMDIDVQYEEDESK
Ga0208010_10222164	3300025097	Marine	MESKLYTYLQLPDNYWTITTTMDVDVQYEQEDESN
Ga0208010_10498542	3300025097	Marine	MESKLYTYLQLPDDYWTITTTMDVDVQYEQEDESN
Ga0208010_11073572	3300025097	Marine	MNLTEKTMESKLYTYLQLPDDYWTITTTMDIGVQYEQEDESN
Ga0208553_10367854	3300025109	Marine	MESSLYTYLQLPDDYWTITTTMDVDVHYEQEDESN
Ga0209349_10185812	3300025112	Marine	MEMEIKKMESSLYTYLQLPDDYWTITTTMDSDFEYTITDTEDESK
Ga0209349_10433324	3300025112	Marine	MESKLYTYLQLPDDYWTITTTMDIDVQYEQEDESN
Ga0209349_10634693	3300025112	Marine	MKNITEKTMESKLYTYLQLPDDYWTITTNMDVDVHYEQEDESN
Ga0209349_10998452	3300025112	Marine	MESKLYTYLQLPDDYWTITTTMDVDVHYEQEDESN
Ga0209349_11380961	3300025112	Marine	MESSLYTYLQLPDDYWTITTTMDVDVHYEQEDENNXLYSRT
Ga0209349_11959672	3300025112	Marine	MEMEIKKMEKTESKLYTYLQLPDDYWTITTTMDVDVQYEQEDESN
Ga0208433_10536853	3300025114	Marine	MESELYTYLQLPDDYWTITTTMDVDVQYEQEDESN
Ga0208790_10790824	3300025118	Marine	MESKLYKYLQLPDDYWTITTNMDIEFQYEQEDKSN
Ga0209434_10685584	3300025122	Marine	MESSLYTYLQLPDDYWTITTTMDSDFEYTITDTEDEDK
Ga0209434_11077074	3300025122	Marine	MESSLYTYLQLPDDYWTITTTMDVDVQYEQEDESNXLYSRTS
Ga0209644_10936602	3300025125	Marine	MKNITEKTMESKLYTYLQLPDDYWTITTTMDVNIQYEQEDESN
Ga0209128_11604492	3300025131	Marine	MEKIMESKLYTYLQLPDDYWTITTTMDIDVQYEQEDESN
Ga0209128_11728951	3300025131	Marine	YMKNLTEKTMESSLYTYLQLPDDYWTITTTMDVDVHYEQEDESN
Ga0209128_11935891	3300025131	Marine	MDSELYTYLQIPNDYWTITTTMDYDFEYVISDNEENE
Ga0209128_11957581	3300025131	Marine	MESKLYTYLQLPDDYWTITTTMDVDVHYEQEDESNXLYSRA
Ga0209756_10131291	3300025141	Marine	MEMEIKKMESSLYTYLQLPDDYWTITTTMDSDFEYTITDTED
Ga0209756_10388092	3300025141	Marine	MESKLYKYLQLPDDYWTITTNMDIDFQYEQEDESK
Ga0209756_12394452	3300025141	Marine	MKNLTEKKMESSLYTYLQLPDDYWTITTTMDVDVQYEQEDESN
Ga0209756_12481463	3300025141	Marine	MENNLYTYLQLPDNYWTITTTMDVGVYYKFDDEDESK
Ga0207894_10771142	3300025268	Deep Ocean	MEMEIKKMESSLYTYLQLPDDYWTITTTMDVDVHYEQEDESN
Ga0208684_10309933	3300025305	Deep Ocean	MEKIEIYSYLQLPEDYWTITTNMDIEFQYEQEDESN
Ga0209757_101861933	3300025873	Marine	MKNLMEKTMESSLYTYLQLPDDYWTITTTMDSDFEYTIIDTEDESN
Ga0208638_11789972	3300026199	Marine	MEMEIKKMESSLYTYLQLPDDYWTISTTMDSDFEYIIKENDE
Ga0207989_10996792	3300026209	Marine	MKNITEKTMESKLYKYLQLPDDYWTITTNMDIEFQYEQEDESN
Ga0208896_10190062	3300026259	Marine	MKNITEKTMESKLYTYLQLPDDYWTITTNMDIEFQYEQEDESN
Ga0208641_10588144	3300026268	Marine	MESSLYTYLQLPDDYWTISTTMDSDFEYTITDTEDESN
Ga0310345_106681593	3300032278	Seawater	EKTMESSLYTYLQLPDDYWTITTTMDVDVHYEQEDENN
Ga0315334_118129302	3300032360	Seawater	MKNLTEKTMESSLYTYLQLPDDYWTITTTMDVDVHYEQEDENN
Ga0310342_1005597522	3300032820	Seawater	MKNITEKTMESKLYTYLQLPDDYWTITTNMDVDVHYEQEDENN
Ga0310342_1021584582	3300032820	Seawater	MEMEIKKMESSLYTYLQLPDDYWTITTNMDIDVQYEQEDESN