Basic Information | |
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Family ID | F084334 |
Family Type | Metagenome |
Number of Sequences | 112 |
Average Sequence Length | 49 residues |
Representative Sequence | MLSDVQLALLYPFVFFFTALSLYILINPQDDEDDDPPDRGTLIPSYYQAS |
Number of Associated Samples | 63 |
Number of Associated Scaffolds | 112 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 36.61 % |
% of genes from short scaffolds (< 2000 bps) | 78.57 % |
Associated GOLD sequencing projects | 59 |
AlphaFold2 3D model prediction | No |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (72.321 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (26.786 % of family members) |
Environment Ontology (ENVO) | Unclassified (68.750 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (83.036 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Transmembrane (alpha-helical) | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 46.00% β-sheet: 0.00% Coil/Unstructured: 54.00% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Marine Seawater Seawater Marine Oceanic Marine Surface Seawater Seawater Marine Marine Sediment Seawater Deep Subsurface Subsea Pool Subsea Pool Microbial Mat |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
KVRMV2_1000638741 | 3300002231 | Marine Sediment | LALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPSYYQAS* |
KVRMV2_1001329789 | 3300002231 | Marine Sediment | VQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPAYYQAS* |
KVRMV2_1003145543 | 3300002231 | Marine Sediment | MLSDVQLALLYPFVFFFTALSLYVLINSQDDGDDDP |
JGI25128J35275_10953531 | 3300002488 | Marine | MLSDVQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPV |
Ga0066856_100692811 | 3300005404 | Marine | MLSDVQLALLYPFVFFFTALSIYLLLTPQDDGDDDPPDRGTLIPAYYSGA* |
Ga0066845_102868702 | 3300005432 | Marine | MLSDIQLALLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPSYYPAG* |
Ga0066371_101412801 | 3300006024 | Marine | MLSDVQLALLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPSYYPAG* |
Ga0068500_11038959 | 3300006332 | Marine | MLSDVQLALLYPFVFFFTALSIYILLTPQDDGDDDPPDRGTLIPAYYSGA* |
Ga0068500_14439842 | 3300006332 | Marine | MLSDVQLALLYPFVFFFTALSIYLLLNPQDDGDDDPPDRGTLIPAYYSGT* |
Ga0068500_16010261 | 3300006332 | Marine | PFVFFFTALSIYLLLNPQDDGDDDPPDRGTLIPAYYSGT* |
Ga0100228_11132832 | 3300006565 | Marine | MLSDLQLALLYPFVFFFTALSLYILLTPKDDGDDDPPDRGTLIPSYYPAG* |
Ga0100228_12105622 | 3300006565 | Marine | MLSDLQLALLYPFVFFFTALSLYILLTPKDDGDDDPPDRGTLIPSYYQAS* |
Ga0098038_10108517 | 3300006735 | Marine | MLSDVQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPSYYQAS* |
Ga0098038_12442673 | 3300006735 | Marine | FYKHFYPYQLIMLSDVQLALLYPFVFFFTALSLYVLINSQDDEDDDPPDRGTLIPAYYSAS* |
Ga0098037_10028626 | 3300006737 | Marine | MLSDVQLALLYPFVFFFTALSLYVLINSQDDEDDDPPDRGTLIPAYYSAS* |
Ga0098048_12550642 | 3300006752 | Marine | MLSDVQLALLYPFVFFFTVLSLYLLINPQDDEDDDPPDRGTLIPSYYPAG* |
Ga0098055_13523792 | 3300006793 | Marine | MLSDVQLALLYPFVFFFTALSLYVLLNPQDDEDDDPPDRGTLIPSYYPAG* |
Ga0098041_10723163 | 3300006928 | Marine | MLSDVQLALLYPFVFFFTALSLYILINPQDDEDDDPPDKGTLIPSYYPAG* |
Ga0098041_11088044 | 3300006928 | Marine | MLSDVQLALLYPFVFFFTALSLYILINPQDDEDDDPPDRGTLIPSYYPAG* |
Ga0098041_11260563 | 3300006928 | Marine | MLSDVQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPAG* |
Ga0115013_103252482 | 3300009550 | Marine | MLSDVQLALLYPFVFFFTALSLYVLINSQDDEDDDPPDRGTLIPAYYSGT* |
Ga0115011_101442843 | 3300009593 | Marine | MLSDVQLALLYPFVFFFTALSLYILINPQDDEDDDPPDKGTLIPSYYQAS* |
Ga0115011_108627912 | 3300009593 | Marine | MLSDVQLALLYPFVFFFTALSLYLLINPQDDGDDDPPDRGTLIPSYYQAS* |
Ga0115011_110990882 | 3300009593 | Marine | MLSDVQLALLYPFVFFFTALSLYILLNPQDDEDDDPPDRGTLIPSYYPAG* |
Ga0115012_100829548 | 3300009790 | Marine | MLSDLQLALLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPAYYSGA* |
Ga0115012_102412565 | 3300009790 | Marine | FFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPAG* |
Ga0115012_116220033 | 3300009790 | Marine | MLSDVQLALLYPFVFFFTALSLYLLLNPQDDGDDDPPDRGTLIPSYYQAS* |
Ga0105189_10045812 | 3300009794 | Marine Oceanic | MLSDVQLALLYPFVFFFTALSLYVLINSQDDEDDDPPDRGTLIPSYYQAS* |
Ga0137843_10461071 | 3300010932 | Subsea Pool | MLSDVQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPAYYQAS* |
Ga0137844_11498973 | 3300010934 | Subsea Pool Microbial Mat | MLSDVQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPXYYQAS* |
Ga0114934_101064237 | 3300011013 | Deep Subsurface | FFFTALSLYVLINSQDDGDDDPPDRGTLIPAYYQAS* |
Ga0163180_1000828811 | 3300012952 | Seawater | MLSDVQLAFLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPAYYSGT* |
Ga0163179_100654773 | 3300012953 | Seawater | MLSDVQLALLYPFVFFFTALFLYVLINSQDDEDDDPPDRGTLIPAYYSAS* |
Ga0163179_109165532 | 3300012953 | Seawater | MLSDVQLALLYPFVFFFTALSIYLLLNPQDDGDDDPPDRGTLIPSYYQAS* |
Ga0163179_110297211 | 3300012953 | Seawater | YQSIMLSDVQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPSYYQAS* |
Ga0163179_111599844 | 3300012953 | Seawater | MLSDVQLALLYPFVFFFTALSLYILINSQDDEDDDPPDRGTLIPSYYQAS* |
Ga0163179_116721281 | 3300012953 | Seawater | MLSDVQLALLYPFVFFFTALSIYLLINPQDDEDDDPPDRGTLIPSYYQAS* |
Ga0163111_115164701 | 3300012954 | Surface Seawater | MLSDVQLALLYPFVFFFTALSLYILLNPQDDGEDDPPVRGTLIPSYYPAG* |
Ga0181383_10490221 | 3300017720 | Seawater | MLSDVQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYSSSSP |
Ga0181383_10566541 | 3300017720 | Seawater | LIMLSDVQLALLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPSYYPAG |
Ga0181383_11543861 | 3300017720 | Seawater | NIFIFYKHFYSYQLIMLSDVQLALLYPFVFFFTALSLYILLNPQDDEDDDPPDRGTLIPSYYPAG |
Ga0181383_12123032 | 3300017720 | Seawater | MLSDVQLALLYPFVFFFTALSLYILINPQDDGDDDPPDRGTLIPSYYPAG |
Ga0181416_10883313 | 3300017731 | Seawater | DVQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPSYYQAS |
Ga0181427_10399381 | 3300017745 | Seawater | NIFIFYKHFYLYQSIMLSDVQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPSYYQAS |
Ga0181405_11427843 | 3300017750 | Seawater | YKHFYPYQLIMLSDVQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPAG |
Ga0181407_10995852 | 3300017753 | Seawater | MLSDVQLALLYPFVFFFTALSLYILINPQDDEDDDPPDRGTLIPSYYQAS |
Ga0181407_11290641 | 3300017753 | Seawater | MLSDVQLALLYPFVFFFTALSLYVLINSQDDEDDDPPDRGTLIPAY |
Ga0181385_12650613 | 3300017764 | Seawater | QLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPSYYQAS |
Ga0181413_11495021 | 3300017765 | Seawater | MLSDVQLALLYPFVFFFTALSLYVLINSQDDEDDDPPYRGTL |
Ga0181406_10121311 | 3300017767 | Seawater | MLSDVQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDMGTLIPSYYQAS |
Ga0181406_10191704 | 3300017767 | Seawater | MLSDVQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPSYYSAS |
Ga0187220_10259231 | 3300017768 | Seawater | MLSDIQLALLYPFVFFFTALSIYLLLNPQDDGDDDPPDR |
Ga0181425_11138861 | 3300017771 | Seawater | YQSIMLSDVQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPSYYQAS |
Ga0181386_11960533 | 3300017773 | Seawater | DVQLALLYPFVFFFTALSLYILFNPQDDEDDDPPDRGTLIPSYYPAG |
Ga0181395_10908561 | 3300017779 | Seawater | KHFYPYQSIMLSDVQLALLYPFVFFFTALSLYILLNPQDDEDDDPPDRGTLIPSYYPAG |
Ga0181380_11375234 | 3300017782 | Seawater | IFILYKHFYPYQSIMLSDVQLALLYPFVFFFTALSLYVLINSQDDEDDDPPDRGTLIPAYYSAS |
Ga0181424_102531924 | 3300017786 | Seawater | ALLYPFVFFFTALSLYVLINSQDDEDDDPPDRGTLIPAYYSAS |
Ga0211584_10401773 | 3300020248 | Marine | MLSDLQLALLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPSYYQAS |
Ga0211515_10027489 | 3300020310 | Marine | MLSDVQLAFLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPAYYSGT |
Ga0211587_1001716412 | 3300020411 | Marine | FYPYQLIMLSDLQLALLYPFVFFFTTLSIYLLLTPQDDGDDDPPDRGTLIPAYYSGA |
Ga0211587_100878601 | 3300020411 | Marine | MLSDLQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPAG |
Ga0211587_102204441 | 3300020411 | Marine | MLSDVQLALLYPFVFFFTALSLYLLLNPQDDSDDDPPDRGTLIPSYYQAS |
Ga0211644_1000313420 | 3300020416 | Marine | MLSDIQLALLYPFVFFFTALSLYILLNPQDDEDDDPPDRGTLIPSYYQAS |
Ga0211644_100675593 | 3300020416 | Marine | MLSDLQLALLYPFVFFFTALSLYLLLNPQDDGDDDPPDRGTLIPSYYQAS |
Ga0211653_101844972 | 3300020421 | Marine | MLSDVQLALLYPFVFFFTVLSLYLLINPQDDEDDDPPDRGTLIPSYYPAG |
Ga0211653_102973804 | 3300020421 | Marine | LALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPAG |
Ga0211521_101884634 | 3300020428 | Marine | LYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPAYYQAS |
Ga0211521_102035924 | 3300020428 | Marine | LYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPSYYQAS |
Ga0211576_100071156 | 3300020438 | Marine | MLSDVQLALLYPFVFFFTALSLYVLINTQDDEDDDPPDKGTLIPAYYSAS |
Ga0211576_100306778 | 3300020438 | Marine | MLSDVQLALLYPFVFFFTALSLYVLINSQDDEDDDPPDRGTLIPAYYSAS |
Ga0211576_100839793 | 3300020438 | Marine | MLSDVQLAFLYPFVFFFTALSLYVLINTQDDEDDDPPDKGTLIPAYYQAS |
Ga0211564_1000073731 | 3300020445 | Marine | MLSDVQLALLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPAYYSGA |
Ga0211564_100298333 | 3300020445 | Marine | MLSDVQLALLYPFVFFFTALSIYLLLTPQDDGDDDPPDRGTLIPAYYSGA |
Ga0211564_100929672 | 3300020445 | Marine | MLSDVQLALLYPFVFFFTALSIYLLLNPQDDEDDDPPDRGTLIPSYYPAG |
Ga0211564_103772093 | 3300020445 | Marine | MLSDLQLALLYPFVFFFTALSLYLLINPQDDEDDDP |
Ga0211473_104549292 | 3300020451 | Marine | MLSDVQLALLYPFVFFFTALSLYVLINSQDDEDDDPPDRGTLIPSYYQAS |
Ga0211643_100843614 | 3300020457 | Marine | MLSDLQLALLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPSYYPAS |
Ga0211643_103597451 | 3300020457 | Marine | IMLSDLQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPAG |
Ga0211643_104553401 | 3300020457 | Marine | MLSDVQLALLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPSYYPAG |
Ga0211643_106451171 | 3300020457 | Marine | MLSDLQLALLYPFVFFFTALSLYLLLNPQDDGDDDPPDRGTLIPSYY |
Ga0211640_106776132 | 3300020465 | Marine | MLSDIQLALLYPFVFFFTALSIYLLLNPQDDGDDDPPDRGTLIPSYYQAS |
Ga0211713_100167586 | 3300020467 | Marine | MLSDLQLALLYPFVFFFTALSLYILLTPKDDGDDDPPDRGTLIPSYYPAG |
Ga0211579_1001178713 | 3300020472 | Marine | MLSDVQLAFLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPAYYSGA |
Ga0211579_101283112 | 3300020472 | Marine | MLSDVQLALLYPFVFFFTALSIYLLLNPQDDGDDDPPDRGTLIPAYYSAS |
Ga0211579_101469742 | 3300020472 | Marine | MLSDVQLALLYPFVFFFTALSIYLFINPQDDEDDDPPDKGTLIPAYYSAS |
Ga0211579_105778903 | 3300020472 | Marine | MLSDVQLALLYPFVFFFTALSIYLLLNPQDDGDDDPPDRGTLIPSYYQAS |
Ga0224906_10576421 | 3300022074 | Seawater | PYQSIMLSDVQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPAG |
Ga0209992_101106032 | 3300024344 | Deep Subsurface | MLSDVQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPSYYQAS |
Ga0209992_103452361 | 3300024344 | Deep Subsurface | MLSDVQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPAYYQAS |
Ga0208158_10318182 | 3300025110 | Marine | MLSDVQLALLYPFVFFFTALSLYILINPQDDEDDDPPDKGTLIPSYYPAG |
Ga0208158_10448663 | 3300025110 | Marine | MLSDVQLALLYPFVFFFTALSLYILINPQDDEDDDPPDRGTLIPSYYPAG |
Ga0208158_10708603 | 3300025110 | Marine | MLSDVQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPAG |
Ga0209232_10252223 | 3300025132 | Marine | MLSDLQLALLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPSYYPAG |
Ga0209232_10637421 | 3300025132 | Marine | LLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPSYYPAG |
Ga0209232_11202322 | 3300025132 | Marine | MLSDVQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPVG |
Ga0209232_11910781 | 3300025132 | Marine | MLSDVQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTL |
Ga0209645_11122043 | 3300025151 | Marine | MLSDIQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPAG |
Ga0209404_102516331 | 3300027906 | Marine | FYKHFYPYQLIMLSDVQLALLYPFVFFFTALSLYILLNPQDDGDDDPPDRGTLIPSYYPA |
Ga0209404_104367123 | 3300027906 | Marine | MLSDVQLALLYPFVFFFTALSLYILINPQDDEDDDPPDKGTLIPSYYQAS |
Ga0209404_108216992 | 3300027906 | Marine | MLSDVQLALLYPFVFFFTALSLYLLINPQDDGDDDPPDRGTLIPSYYQAS |
Ga0183757_10544103 | 3300029787 | Marine | NILIFYKHFYSYQLIMLSDVQLALLYPFVFFFTALSLYVLINSQDDGDDDPPDRGTLIPSYYQAS |
Ga0315332_1000031940 | 3300031773 | Seawater | MLSDVQLALLYPFVFFFTALSLYILLNPQDDEDDDPPDKGTLIPSYYPAS |
Ga0315332_1001191310 | 3300031773 | Seawater | MLSDVQLALLYPFVFFFTALSLYVLINTQNDEDDDPPDKGTLIPAYYSAS |
Ga0315331_1000055943 | 3300031774 | Seawater | MLSDLQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPVG |
Ga0315331_101901923 | 3300031774 | Seawater | MLSDVQLALLYPFVFFFTALSLYVLINSQDDEDDDPPDRGTLIPAYYSGT |
Ga0315331_103172601 | 3300031774 | Seawater | MLSDVQLALLYPFVFFFTALSLYLLINPQDDEDDD |
Ga0315326_100269128 | 3300031775 | Seawater | MLSDVQLALLYPFVFFFTALSLYILLNPQDDEDDDPPDRGTLIPSYYPAG |
Ga0310344_100077823 | 3300032006 | Seawater | MLSDVQLALLYPFVFFFTALSIYILLTPQDDGDDDPPDRGTLIPAYYSGA |
Ga0315316_104489471 | 3300032011 | Seawater | VQLALLYPFVFFFTALSLYLLINPQDDEDDDPPDRGTLIPSYYPAG |
Ga0315327_102570646 | 3300032032 | Seawater | SYKHFYSYTLIMLSDVQLALLYPFVFFFTALSLYILLNPQDDEDDDPPDKGTLIPSYYPA |
Ga0315330_102355073 | 3300032047 | Seawater | MLSDVQLALLYPFVFFFTALSLYLLINPQDDEDDDPPD |
Ga0315330_106435691 | 3300032047 | Seawater | FVFFFTALSLYILINPQDDEDDDPPDRGTLIPSYYQAS |
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