Metagenome / Metatranscriptome Family F084321

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084321
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	80 residues
Representative Sequence	MRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPRRYKVMNPVILGDALR
Number of Associated Samples	70
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	72.32 %
% of genes near scaffold ends (potentially truncated)	25.89 %
% of genes from short scaffolds (< 2000 bps)	92.86 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (71.429 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.036 % of family members)
Environment Ontology (ENVO)	Unclassified (59.821 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.964 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.93% β-sheet: 10.09% Coil/Unstructured: 77.98%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF04828	GFA	2.68
PF03457	HA	1.79
PF00027	cNMP_binding	1.79
PF13202	EF-hand_5	1.79
PF06411	HdeA	1.79
PF04606	Ogr_Delta	0.89
PF01844	HNH	0.89
PF17201	Cache_3-Cache_2	0.89
PF00331	Glyco_hydro_10	0.89
PF03733	YccF	0.89
PF04851	ResIII	0.89
PF08734	GYD	0.89
PF04392	ABC_sub_bind	0.89
PF00496	SBP_bac_5	0.89
PF04964	Flp_Fap	0.89
PF13405	EF-hand_6	0.89
PF01925	TauE	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG3791	Uncharacterized conserved protein	Function unknown [S]	2.68
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.89
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.89
COG3304	Uncharacterized membrane protein YccF, DUF307 family	Function unknown [S]	0.89
COG3693	Endo-1,4-beta-xylanase, GH35 family	Carbohydrate transport and metabolism [G]	0.89
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.89
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
All Organisms	root	All Organisms	28.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
cellular organisms	root	All Organisms → cellular organisms	28.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	20.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14.29 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.04 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.25 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.89 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.57 %
Methylovirgula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula	0.89 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.43 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.57 %
Methylovirgula ligni	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	0.89 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10133227	Not Available	518	Open in IMG/M
3300005332\|Ga0066388_101079520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1356	Open in IMG/M
3300005363\|Ga0008090_15688781	Not Available	622	Open in IMG/M
3300005764\|Ga0066903_100419745	All Organisms → cellular organisms → Bacteria	2214	Open in IMG/M
3300005764\|Ga0066903_100685171	All Organisms → cellular organisms → Bacteria → Proteobacteria	1802	Open in IMG/M
3300005764\|Ga0066903_101556648	Not Available	1251	Open in IMG/M
3300005764\|Ga0066903_103676964	Not Available	825	Open in IMG/M
3300005764\|Ga0066903_104246619	Not Available	766	Open in IMG/M
3300005764\|Ga0066903_105552927	Not Available	664	Open in IMG/M
3300006041\|Ga0075023_100311706	Not Available	652	Open in IMG/M
3300006057\|Ga0075026_100235513	Not Available	977	Open in IMG/M
3300006354\|Ga0075021_10583399	Not Available	713	Open in IMG/M
3300010358\|Ga0126370_10663816	Not Available	910	Open in IMG/M
3300010360\|Ga0126372_11882904	Not Available	643	Open in IMG/M
3300010360\|Ga0126372_12336933	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	585	Open in IMG/M
3300010361\|Ga0126378_11628112	Not Available	733	Open in IMG/M
3300010376\|Ga0126381_100585265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1586	Open in IMG/M
3300010398\|Ga0126383_11289146	All Organisms → cellular organisms → Bacteria → Proteobacteria	820	Open in IMG/M
3300010398\|Ga0126383_11388141	Not Available	792	Open in IMG/M
3300012948\|Ga0126375_11966565	Not Available	515	Open in IMG/M
3300012971\|Ga0126369_10763437	Not Available	1047	Open in IMG/M
3300012971\|Ga0126369_11435791	Not Available	780	Open in IMG/M
3300012971\|Ga0126369_13013309	Not Available	551	Open in IMG/M
3300016270\|Ga0182036_11055644	Not Available	671	Open in IMG/M
3300016270\|Ga0182036_11360266	Not Available	594	Open in IMG/M
3300016294\|Ga0182041_10114998	Not Available	2008	Open in IMG/M
3300016294\|Ga0182041_12026131	Not Available	536	Open in IMG/M
3300016319\|Ga0182033_10232695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1487	Open in IMG/M
3300016319\|Ga0182033_10974714	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300016341\|Ga0182035_11015880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	735	Open in IMG/M
3300016341\|Ga0182035_11735758	Not Available	564	Open in IMG/M
3300016357\|Ga0182032_10188232	All Organisms → cellular organisms → Bacteria → Proteobacteria	1561	Open in IMG/M
3300016357\|Ga0182032_10241226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1400	Open in IMG/M
3300016357\|Ga0182032_10642843	Not Available	886	Open in IMG/M
3300016357\|Ga0182032_11238388	Not Available	643	Open in IMG/M
3300016371\|Ga0182034_10056867	All Organisms → cellular organisms → Bacteria	2615	Open in IMG/M
3300016371\|Ga0182034_10800209	Not Available	806	Open in IMG/M
3300016371\|Ga0182034_10837752	Not Available	788	Open in IMG/M
3300016404\|Ga0182037_10995755	Not Available	730	Open in IMG/M
3300016445\|Ga0182038_10805064	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300017974\|Ga0187777_10446923	Not Available	898	Open in IMG/M
3300021560\|Ga0126371_10331709	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300021560\|Ga0126371_10831702	Not Available	1069	Open in IMG/M
3300021560\|Ga0126371_11212020	Not Available	891	Open in IMG/M
3300021560\|Ga0126371_13031469	Not Available	569	Open in IMG/M
3300025916\|Ga0207663_10325367	Not Available	1156	Open in IMG/M
3300025916\|Ga0207663_11050674	Not Available	654	Open in IMG/M
3300026823\|Ga0207759_114902	Not Available	609	Open in IMG/M
3300026835\|Ga0207782_103889	Not Available	1414	Open in IMG/M
3300026845\|Ga0207760_104606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1199	Open in IMG/M
3300026847\|Ga0207802_1018888	Not Available	597	Open in IMG/M
3300026860\|Ga0207823_107225	Not Available	814	Open in IMG/M
3300026876\|Ga0207837_1015854	Not Available	635	Open in IMG/M
3300026909\|Ga0207858_1011752	Not Available	862	Open in IMG/M
3300026959\|Ga0207852_1005778	Not Available	1424	Open in IMG/M
3300027014\|Ga0207815_1000762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4914	Open in IMG/M
3300027039\|Ga0207855_1017493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	986	Open in IMG/M
3300027680\|Ga0207826_1008139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2843	Open in IMG/M
3300027680\|Ga0207826_1125047	Not Available	704	Open in IMG/M
3300027874\|Ga0209465_10240216	Not Available	906	Open in IMG/M
3300031446\|Ga0170820_11605178	Not Available	552	Open in IMG/M
3300031545\|Ga0318541_10170451	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300031545\|Ga0318541_10424142	Not Available	744	Open in IMG/M
3300031545\|Ga0318541_10519814	Not Available	666	Open in IMG/M
3300031545\|Ga0318541_10869587	Not Available	503	Open in IMG/M
3300031546\|Ga0318538_10515969	Not Available	648	Open in IMG/M
3300031573\|Ga0310915_10529297	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300031668\|Ga0318542_10371261	Not Available	737	Open in IMG/M
3300031682\|Ga0318560_10520079	Not Available	645	Open in IMG/M
3300031719\|Ga0306917_10138934	Not Available	1791	Open in IMG/M
3300031719\|Ga0306917_10426400	All Organisms → cellular organisms → Bacteria → Proteobacteria	1037	Open in IMG/M
3300031719\|Ga0306917_11327915	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300031724\|Ga0318500_10160486	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300031771\|Ga0318546_10843788	Not Available	645	Open in IMG/M
3300031777\|Ga0318543_10317638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	697	Open in IMG/M
3300031782\|Ga0318552_10496869	Not Available	623	Open in IMG/M
3300031794\|Ga0318503_10310112	Not Available	513	Open in IMG/M
3300031796\|Ga0318576_10592812	Not Available	522	Open in IMG/M
3300031833\|Ga0310917_10149599	Not Available	1540	Open in IMG/M
3300031835\|Ga0318517_10399447	Not Available	621	Open in IMG/M
3300031879\|Ga0306919_10275385	Not Available	1272	Open in IMG/M
3300031879\|Ga0306919_10387147	Not Available	1071	Open in IMG/M
3300031879\|Ga0306919_10744581	Not Available	754	Open in IMG/M
3300031879\|Ga0306919_10777166	Not Available	736	Open in IMG/M
3300031880\|Ga0318544_10179009	Not Available	817	Open in IMG/M
3300031890\|Ga0306925_10279124	Not Available	1798	Open in IMG/M
3300031890\|Ga0306925_10404712	Not Available	1462	Open in IMG/M
3300031890\|Ga0306925_10860665	Not Available	936	Open in IMG/M
3300031897\|Ga0318520_10406180	Not Available	833	Open in IMG/M
3300031910\|Ga0306923_10101627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3245	Open in IMG/M
3300031910\|Ga0306923_10469244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1426	Open in IMG/M
3300031910\|Ga0306923_11495080	Not Available	707	Open in IMG/M
3300031912\|Ga0306921_10469820	Not Available	1464	Open in IMG/M
3300031912\|Ga0306921_11005449	Not Available	940	Open in IMG/M
3300031941\|Ga0310912_10209154	Not Available	1493	Open in IMG/M
3300031945\|Ga0310913_10489840	Not Available	873	Open in IMG/M
3300031945\|Ga0310913_10855689	Not Available	640	Open in IMG/M
3300031945\|Ga0310913_11268753	Not Available	511	Open in IMG/M
3300031946\|Ga0310910_10030817	All Organisms → cellular organisms → Bacteria → Proteobacteria	3644	Open in IMG/M
3300031947\|Ga0310909_10265559	Not Available	1435	Open in IMG/M
3300031947\|Ga0310909_10282142	Not Available	1390	Open in IMG/M
3300031947\|Ga0310909_10334916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → Methylovirgula ligni	1270	Open in IMG/M
3300031954\|Ga0306926_10100121	All Organisms → cellular organisms → Bacteria → Proteobacteria	3552	Open in IMG/M
3300031962\|Ga0307479_10358019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1443	Open in IMG/M
3300032001\|Ga0306922_10314444	Not Available	1681	Open in IMG/M
3300032001\|Ga0306922_10807029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	981	Open in IMG/M
3300032025\|Ga0318507_10139666	Not Available	1031	Open in IMG/M
3300032055\|Ga0318575_10413511	Not Available	685	Open in IMG/M
3300032065\|Ga0318513_10669717	Not Available	508	Open in IMG/M
3300032066\|Ga0318514_10440996	Not Available	692	Open in IMG/M
3300032076\|Ga0306924_10571880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1281	Open in IMG/M
3300032076\|Ga0306924_11037094	Not Available	898	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.32%
Aquatic	Environmental → Aquatic	2.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.32%
Sediment	Environmental → Aquatic → Sediment	2.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.79%
Loam	Environmental → Terrestrial → Soil → Loam	19.64%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	62.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.39%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.79%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	17.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.39%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026823	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 19 (SPAdes)	Environmental	Open in IMG/M
3300026835	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 60 (SPAdes)	Environmental	Open in IMG/M
3300026845	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 24 (SPAdes)	Environmental	Open in IMG/M
3300026847	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 20 (SPAdes)	Environmental	Open in IMG/M
3300026860	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 70 (SPAdes)	Environmental	Open in IMG/M
3300026876	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 58 (SPAdes)	Environmental	Open in IMG/M
3300026909	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 23 (SPAdes)	Environmental	Open in IMG/M
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300027014	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 4 (SPAdes)	Environmental	Open in IMG/M
3300027039	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_101332272	3300000793	Forest Soil	MNKKKRQRYLVRVVPGGGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKSCSTTLVMPERYKIRTQ*
Ga0066388_1010795202	3300005332	Tropical Forest Soil	MSKKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNNLTDKHLYRPYFYTRWFCCVNKSCRTTLVMPERYKVRANASPAAKLIT*
Ga0008090_156887811	3300005363	Tropical Rainforest Soil	VRKKKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNNLTDKHLHRPYLYTRWFCCMDKSCRTTLVMPERYKVMNPVMLSDD*
Ga0066903_1004197451	3300005764	Tropical Forest Soil	MSKKKRQRDRTLVVPGDGDPCPRCGVPMQIREYSELTDKHLHRPYFYTRWFCCMNKSCRTTLVMPERYKVMNPVMLNAD*
Ga0066903_1006851711	3300005764	Tropical Forest Soil	MNKKKRQRYLVRIVPGDGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCTNKSCPTTLVIPERYKVMNSAMLGDALENS*
Ga0066903_1015566482	3300005764	Tropical Forest Soil	MNKKKRQRYLFRVVPGDGDPCPRCGVPMQTREYCNLTDTHSRRPYFYTRWFCCMNKSCRTTLVMPERYKIMNPVMLGDA*
Ga0066903_1036769641	3300005764	Tropical Forest Soil	VRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLHRPYLYTRWFCCMNKSCRTTLVMPRRYKVMNPVTL
Ga0066903_1042466192	3300005764	Tropical Forest Soil	VRKKERQRYLVRVVPGEGDPCPRCGVPMQIREYNNSTDKHLHRPYFYTRWFCCLDKSCRTTLVMPERYKVMNPVMLSDD*
Ga0066903_1055529272	3300005764	Tropical Forest Soil	MSKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLYRPYFYTRWFCCMNKCCRTTLVMPERYKVRANASPAATLIT*
Ga0075023_1003117061	3300006041	Watersheds	SFRVTGSAMRKKKRQRNRAVVVRGDGDPCPRCGVPMQIREYSNLTDKDLHRPYFYTRWFCCMNKSCRTTMVMPERYKVMNPAMLGDALEKRTT*
Ga0075026_1002355133	3300006057	Watersheds	MRKKKRQRNRAVVVRGDGDPCPRCGVPMQIREYSNLTDKDLHRPYFYTRWFCCMNKSCRTTLVMPERYKVMNPAMLGDALEKGTT*
Ga0075021_105833992	3300006354	Watersheds	MRKKKRQRNRAVVVRGDGDPCPRCGVPMQIREYSNLTDKDLHRPYFYTRWFCCMNKSCRTTLVMPERYKVMNPAMLGDALEKGNEIPVASAI*
Ga0126370_106638161	3300010358	Tropical Forest Soil	VRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPRRYKVMNPVILGDALR*
Ga0126372_118829042	3300010360	Tropical Forest Soil	MRKKKRQRYLVRVVPGDGDPCPRCGEPMQIREYSNLTDKHLHRPCFYTRWFCCRNKSCRTTLVMPERYKVMKPVMLGDALENG*
Ga0126372_123369331	3300010360	Tropical Forest Soil	MKRQRRKLIVIPGNGDPCPRCGVPMQIREYDEVTKKKLRQLYFYTRWFCCMNKSCRTTLVMPARYKVMNPAPL*
Ga0126378_116281122	3300010361	Tropical Forest Soil	VRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTNKDLHRPYFYTRWFCCTNKSCPTTLVMPKRYKVRANASPAAKLIT*
Ga0126381_1005852653	3300010376	Tropical Forest Soil	VRKKKRQRYLVRVVPGEGDPCPRCGVPMQIRAYNNLTDKHLHRPYFYTRWFCWMNKSCRATLVMPRRYKVMNP
Ga0126383_112891461	3300010398	Tropical Forest Soil	MSERMNKKKRQRDRAVVVPGDGDPCPRCGVPMQIREYSELTDKHLHRPYFYTRWFCCMNKSCSTTLVMPERYKIRTQ*
Ga0126383_113881411	3300010398	Tropical Forest Soil	VRKKKRQRYLVRVVPGEGDPCPRCGVPMQIRAYNNLTDKHLHRPYFYTRWFCCMNKSCSTTLVMPERYKVRANEKPEGNKPTC*
Ga0126375_119665652	3300012948	Tropical Forest Soil	VEWRNVLSKKKRKRHRAVVVPGDGDPCPRCGVSMQIRKYSDLTDKHLHRPYFYTRWFCCMDKSCRTTLVMPERYKVMNPEMLGDA*
Ga0126369_107634372	3300012971	Tropical Forest Soil	VRKKERQRYLVRVVPGEGDPCPRCGVPMQIRAYNNLTDKHLHRPYFYTRWFCWMNKSCRATLVMPRRYKVMNPVILGDALR*
Ga0126369_114357911	3300012971	Tropical Forest Soil	MSKKKRQRYLVRIVPGEGDTCPRCDVPMQIREYSNLTHLHRPYFYTRWFCCMNKCCRTTLVMPERYKVRANASPAAKLIT*
Ga0126369_130133091	3300012971	Tropical Forest Soil	MGDLRANGLGRRVVLNKKKRQHDRAVVVPEDGDPCQRCGVPMQIREYSNSTDKHLHRPYFYTRWFCCLDKSCRTTLVMPERYKVMNPVMLSDDWN*
Ga0182036_110556441	3300016270	Soil	MSKKKRQRYLVRIVPGEGDPCPRCDVPMQIREYSNLTDKHLHRPYFYTRWFFCMNKSCRTTLVMPERYKVMNPVILGDALR
Ga0182036_113602661	3300016270	Soil	MRKKKRQRHLVRVVPGDGDPCPRCGVPMQIREYNDLTNKHLHRPYFYTRWFCCMNKSCPTTLVMPERYKVRANEKPEGNKPTR
Ga0182041_101149986	3300016294	Soil	QGASFRSGSAVRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNSTEQHLHRPYFYTRWFCCMDKSCRTTLVMPERYKVINPVMLNDE
Ga0182041_120261311	3300016294	Soil	MRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTEKHLHRPYFYTRWFCCMNKSCRTTLVMPRRYKVIEPSDIGRCATLSRGAVASQQSN
Ga0182033_102326952	3300016319	Soil	MRKKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNDLTNKHPHRPYFYTRWFCCMNKSCPTTLVMPERYKVRANEKPEGNKSTR
Ga0182033_109747141	3300016319	Soil	VRKKKRQRYLVRVVAGEGDPCPRCGVPMQIREYNNLTDKHLHRSYLYTRWFCCMDKSCRTTLVMPERYKVINPVMLSID
Ga0182035_110158802	3300016341	Soil	MRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTEKHLHRPYFYTRWFCCMNKSCRTTLVMPRRYKVIEP
Ga0182035_117357581	3300016341	Soil	VRKKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNNLTDKHLHWPYFYTRWFCCMNKSCRTTLVMPRRYKVTN
Ga0182032_101882324	3300016357	Soil	VSKKKRQRHLVRVVPGDGDPCPRCGVPMQIREYGDLTDKHLHRPYFYTRWFCCRNKSCRTTLVMPERYKVMN
Ga0182032_102412261	3300016357	Soil	VRKKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKTCHTTLVMPERYKVRANASPAAKL
Ga0182032_106428432	3300016357	Soil	VRKKKRQRYLVRVVPGESDPCPRCGVPMQIRAYNNLTDKHLHRPYFYTRWFCWMNKSCRTTLVMPRRYKVMNPVILGDALR
Ga0182032_112383882	3300016357	Soil	VRKKKRQRYLVRIVPGEGDPCPRCGVPMQIREYNNLTDKHLHRPYLYTRWFCCMNKSCRTTLVMPRRYKVMNPVTLGDALR
Ga0182034_100568673	3300016371	Soil	VSEKKRQRHLVRVVPGDGDPCPRCGVPMQIREYGDLTDKHLHRPYFYTRWFCCRNKSCRTTLVMPERYKVMNPVMLGDALEKGTR
Ga0182034_108002092	3300016371	Soil	MSKKKRQRYLVRIVAGDGDPCPRCDVPMQIREYSNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPERYKVMNPVTLGDALR
Ga0182034_108377522	3300016371	Soil	VRKKKRQRYLVRVVPGEGDPCPRCSVPMQIREYNNLTDKHLHRPYFYTRWFCCMDKSCRTTLVMPERYKVMNPVMLSDD
Ga0182037_109957551	3300016404	Soil	MKRQRRKLIVIPGNGDPCPRCGVPMQIREYDEVTKKKLRQPYFYTRWFCCMNKSCRTTLVMPERYKVMNPVPL
Ga0182038_108050641	3300016445	Soil	MSKKKRQRYLVRIVPGDGDPCPRCDVPMQIREYSNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPERYKVMNPVLMLSDD
Ga0187777_104469231	3300017974	Tropical Peatland	MNKKKRQRYLVRVVPGGGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKNCPTTLVMPKRYKIRNPVMVSDD
Ga0126371_103317092	3300021560	Tropical Forest Soil	VRKKKRQRYLVRVVPGEGDPCPRCGVPMQIRAYNNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPRRYKVMNPVILGDALR
Ga0126371_108317022	3300021560	Tropical Forest Soil	MNKKKRQRYLVRVVPGGGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMDKSCSTTLVMPERYKIRTQ
Ga0126371_112120202	3300021560	Tropical Forest Soil	MRTSKKKRQRYLVRVVPGDGDPCPRCGVPMQIRQYNDLTNKHLHRPHFYTRWFCCMNKSCRTTLVMPERYKVMNPVMLNAD
Ga0126371_130314692	3300021560	Tropical Forest Soil	VRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNDLTDKHLHRPYLYTRWFCCMNKSCRTTLVMPRRYKVMNPVTLGDALR
Ga0207663_103253673	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRKKNASVIGAVVVPGDGDPCPRCGVPMQIREYSNLTDKHSHRPYFYMRWFCCMNKNCRTTLVIPERYKVMNPVMLTDE
Ga0207663_110506741	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	FRVTGSAMRKKKRQRNRAVVVQGDGDPCPRCGVPMQIREYSNLTDKDLHRPYFYTRWFCCMNKSCRTTLVMPERYKVMNPAMVGDALEKGTA
Ga0207759_1149022	3300026823	Tropical Forest Soil	MVQRAGVDVEKLTKKKRRRYLVRVVPGDGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKSCPTTLVMPERYKVRANASPTAKLIT
Ga0207782_1038893	3300026835	Tropical Forest Soil	QRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMDKSCRTTLVMPRRYKVMNPVILGDALR
Ga0207760_1046062	3300026845	Tropical Forest Soil	MRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMDKSCRTTLVMPRRYKVMNPVILGDALR
Ga0207802_10188882	3300026847	Tropical Forest Soil	MVQRAGVDVEKLTKKKRRRYLVRVVPGDGDPCPRCGVPMQIREYNNLTNKDLHRPYFYTRWFCCTNKSCPTTLVMPERYKVRANASPTAKLIT
Ga0207823_1072251	3300026860	Tropical Forest Soil	MRKKKRQRYLVRVVPGEGDPCPRCGVPMQIRGYNNLTDKHLHRPYFYTRWFCCMNKNCPTTLVMPKRYKIRNPVMVSDD
Ga0207837_10158541	3300026876	Tropical Forest Soil	MVQRAGVDVEKLTKKKRRRYLVRVVPGDGDPCPRCGVPMQIREYNNLTNKDLHRPYFYTRWFCCTNKSCPTTLVMPERYKVRANASPTAKL
Ga0207858_10117521	3300026909	Tropical Forest Soil	SGSAMRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMDKSCRTTLVMPRRYKVMNPVILGDALR
Ga0207852_10057783	3300026959	Tropical Forest Soil	MRKKKRQRYLVRVVPGEGDPCPCCGVPMQIREYNLTDKHLHRPYFYTRWFCCTNKSCPTTLVMPERYKVRANASPAAKLIT
Ga0207815_10007624	3300027014	Tropical Forest Soil	MRKKKRQRYLVRVVPGGGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMDKSCRTTLVMPRRYKVS
Ga0207855_10174932	3300027039	Tropical Forest Soil	MRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLYRPYFYTRWFCCVNKSCRTTLVMPRRYKVMNPVILGDALR
Ga0207826_10081393	3300027680	Tropical Forest Soil	MNKKKRQRYLVRVVPGGGDPCPRCGVPMQIREYNNLTDKHLRRPYFYTRWFCCMNKSCPTTLVMPERYKIKSRQEVLRQVLS
Ga0207826_11250472	3300027680	Tropical Forest Soil	MVQRAGVDVEKLTKKKRRRYLVRVVPGDGDPCPRCGVPMQIREYNNLTNKDLHRPYFYTRWFCCTNKSCPTTLVMPERYKVRANASPAAKLIT
Ga0209465_102402161	3300027874	Tropical Forest Soil	VRKKKRQRYLVRVVPGEGDPCPRCGVPMQIRAYNNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPRRYKVMTLSRGAVASQQF
Ga0170820_116051781	3300031446	Forest Soil	VVRGDGDPCPRCGVPMQIREYSNLTDKDLHQPYFYTRWFCCMNKSCRTTLVMPERYKVMNPAMLGDAAI
Ga0318541_101704512	3300031545	Soil	VSKKKRQRHLVRVVPGDGDPCPRCGVPMQIREYGDLTDKHLHRPYFYTRWFCCRNKSCRTTLVMPERYKVMNPVMLGDALEKGTR
Ga0318541_104241421	3300031545	Soil	MSKKKRQRYLVRIVPGEGDPCPRCDVPMQIREYSNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPERYKVMNPVTLGDALR
Ga0318541_105198141	3300031545	Soil	VRKKKRQRYLVRVVPGEGDPCPRCGVPMQIRAYNNLTDKHLHRPYFYTRWFCWMNKSCRTTLVMPRRYKVMNPVILGDALR
Ga0318541_108695871	3300031545	Soil	SFRSGLAVRKKNRQRYLVRVVPGDGDPCPRCGVPMQIREYNNLTDKHLHWPYFYTRWFCCMNKSCRTTLVMPRRYKVTNPVTLGDALR
Ga0318538_105159691	3300031546	Soil	MSKKKRQRYLVRIVPGEGDPCPRCDVPMQIREYSNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPERYNVMNPVILGDALR
Ga0310915_105292971	3300031573	Soil	VSKKKRQRHLVRVVPGDGDPCPRCGVPMQIREYGDLTDKHLHRPYFYTRWFCCMDKSCRTTLVMPERYKVMNPVMLSDD
Ga0318542_103712612	3300031668	Soil	VRKKKRQRYLVRIVPGEGDPCPRCGVPMQIREYNNLTDKHLHRPYLYTRWFCCMNKSCRTTLVMPRRYKVMDPVTLGDALR
Ga0318560_105200792	3300031682	Soil	LIMSEHMKKKMRQRDRAVVVPGDGDPCPRCGMSMQIREYSNSTNQYLRRPYFYTRWFCCMNKSCRTTLVMPERYKVMNPVTLGDALR
Ga0306917_101389342	3300031719	Soil	VRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMDKSCRTTLVMPERYKVMNPVMLSDD
Ga0306917_104264002	3300031719	Soil	VRKKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNNLTDKHLHWPYFYTRWFCCMNKSCRTTLVMPRRYKVTNPVTLGDALR
Ga0306917_113279152	3300031719	Soil	MRNKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNDLTNKHPHRPYFYTRWFCCMNKSCPTTLVMPERYKVRANEKPEGNKPTR
Ga0318500_101604862	3300031724	Soil	MSKKKRQRYLVRVVPGNGDLCPRCGVPMQIREYSNLTDKHLHRPCFYTRWFCCRNKSCRTTLVMPERYKVRANASPAAKLIT
Ga0318546_108437882	3300031771	Soil	MSKKKRQRYLVRIVPGEGDPCPRCDVPMQIREYSNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPERYKVMNPVLMLSDD
Ga0318543_103176382	3300031777	Soil	MNKKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNDLTNKHLHRPYFYTRWFCCMNKSCRTTLVMPRRYKVMNPVILGDALR
Ga0318552_104968691	3300031782	Soil	MRKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPRRYKVMNPVILGDALR
Ga0318503_103101121	3300031794	Soil	GSCAVLTAIDGEHVSKKKRQRHLVRVVPGDGDPCPRCREPMQIREYSNLTDKHLHRPCFYTRWFCCRNKSCRTTLVMPERYKVRANASPAAKLIT
Ga0318576_105928121	3300031796	Soil	VKKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLHWPYFYTRWFCCMNKSCRTTLVMPRRYKVMNPVTLGDALR
Ga0310917_101495991	3300031833	Soil	MSKKKRQRYLVRVVPGDGDPCPRCSVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKTCHTTLVMPERYKVRANALPAAKLIT
Ga0318517_103994472	3300031835	Soil	MSKKKRQRYLVRIVPGEGDPCPRCDVPMQIREYSNLTDKHLHRPYFYTRWFCCVNKSCRTTLVMPQRYKVMNPVTLGDALR
Ga0306919_102753851	3300031879	Soil	MRKKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNDLTNKHPHRPYFYTRWFCCMNKSCPTTLVMPERYKVRANEKPEGNKPTR
Ga0306919_103871472	3300031879	Soil	VCKKKRQRYLVRVVPGDGDPCPRCSVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKTCHTTLVMPERYKVRANALPAAKLIT
Ga0306919_107445811	3300031879	Soil	MSKKKRQRYLVRIVPGEGDPCPRCDVPMQIREYSNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPERYKVMNPVTL
Ga0306919_107771662	3300031879	Soil	MSKKKRQRYLVRVVPGNGDLCPRCGVPMQIREYSNLTDKHLHRSYFYTRWFCCTNKNCRTTLVMPERYKVIN
Ga0318544_101790093	3300031880	Soil	MRKKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNNLTDKHLHRPYLYTRWFCCMNKSCRTTLVMPRRYKVMNPVTLGDALR
Ga0306925_102791242	3300031890	Soil	VRKKKRQRYLVRVVPGESDPCPRCGVPMQIRAYNNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPRRYKVMNPVILGDALR
Ga0306925_104047123	3300031890	Soil	MNKKKRQRYLVRVVPGGGDPCPRCGVPMQIREYNNLTDKHLHRLYFYTRWFCCMNKSCSTTLVMPERYKIRTQ
Ga0306925_108606651	3300031890	Soil	VCKKKRQRYLVRVVPGDGDPCPRCSVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKTCHTTLVMPERYKVRANASPAAKLIT
Ga0318520_104061801	3300031897	Soil	MSKKKRQRYLVRVVPGNGDLCPRCGVPMQIREYSNLTDKHLHRSYFYTRWFCCTNKNCRTTLVMPERYKVMNPVMLNDE
Ga0306923_101016275	3300031910	Soil	MSKKKRQRYLVRIVAGDGDPCPRCDVPMQIREYSNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPERYKVMNPVLMLSDD
Ga0306923_104692442	3300031910	Soil	VRKKKRQRYLVRVVAGEGDPCPRCGVPMQIREYNNLTDKHLHRSYLYTRWFCCMDKSCRTTLVMPERYKVINPVMLSDD
Ga0306923_114950802	3300031910	Soil	MRKKKRQRHLVRVVPGDGDPCPRCGVPMQIREYNDLTNKHPHRPYFYTRWFCCMNKSCPTTLVMPERYKLRANGIGGL
Ga0306921_104698204	3300031912	Soil	RIVPGEGDPCPRCDVPMQIREYSNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPERYNVMNPVILGDALR
Ga0306921_110054492	3300031912	Soil	DRRVVIPSDGDPCPPCGVPMQIREYAEASKEHLDQPYLYTRWFCCMNKSCRTTLVMPERYKVMNPVPF
Ga0310912_102091543	3300031941	Soil	MNKKKRQRYLVRVVPGGGDPCPRCGVPMQIREYNNLTDQHLHRLYFYTRWFCCMNKSCSTTLVMPERYKIRTQ
Ga0310913_104898401	3300031945	Soil	MNKKKRQRYLVRVVPGGGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKSCSTTLVMPERYKIRTQ
Ga0310913_108556891	3300031945	Soil	AQGASFRIGSAVRKKKRQRYLVRVVAGEGDPCPRCGVPMQIREYNNLTDKHLHRSYLYTRWFCCMDKSCRTTLVMPERYKVINPVMLSDD
Ga0310913_112687531	3300031945	Soil	MSKKKRQRYLVRVVPGNGDLCPRCGVPMQIHEYSNLTDKHLHRSYFYTSWFCCTNKNCRTTLVMPER
Ga0310910_100308171	3300031946	Soil	VRKKKRQRYLVRIVPGDGDPCPRCGVPMQIREYNNLTDKHLHRPYLYTRWFCCMNKSCRTTLVMPRRYKVMNPVTLGDALR
Ga0310909_102655591	3300031947	Soil	MSKKKRQRYLVRVVPGNGDLCPRCGVPMQIREYSNLTDKHLHRSYFYTRWFCCTNKNCRTTLVMPERYKVINPVMLNDE
Ga0310909_102821424	3300031947	Soil	VSKKKRQRHLVRVVPGDGDPCPRCGVPMQIREYGDLTDKHLHRPYFYTRWFCCRNKSCRTTLVMPERYKVMNPVM
Ga0310909_103349162	3300031947	Soil	VKKKKRQRYLVRVVPGEGDPCPRCGVPMQIREYNNLTDKHLHRPYFYTRWFCCMDKSCRTTLVMPERYKVMNPAMLSDD
Ga0306926_101001211	3300031954	Soil	RPDRSGDGDPCPRCGVPMQIREYNNLTDKHLHRPYLYTRWFCCMNKSCRTTLVMPRRYKVMNPVTLGDALR
Ga0307479_103580193	3300031962	Hardwood Forest Soil	MRKKKRQRNRAVVVRGDGDPCPRCGVPMQIREYSNSTNQYLRRSYFYTRWFCCLNKSCRTTLVMPERYKVMNSGFSGSSAI
Ga0306922_103144442	3300032001	Soil	QRYLVRVVPGESDPCPRCGVPMQIRAYNNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPRRYKVMNPVILGDALR
Ga0306922_108070291	3300032001	Soil	TVQNGGEHLRKKKRNRDRRVVIPGDGDPCPRCGVLMQIREYAEASKEHLDPPYFYTRWFCCMNKSCRTTLVMPERYKVMNPVPH
Ga0318507_101396661	3300032025	Soil	VRKKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNNLTDKHLHWPYFYTRWFCCMNKSCRTTLVMPRRYKVMNPVTLGDALR
Ga0318575_104135111	3300032055	Soil	MSKKKRQRYLVRIVPGEGDPCPRCDVPMQIREYSNLTDKHLHRPYFYTRWFCCMNKSCRTTLVMPRRYKVTNPVTLGDALR
Ga0318513_106697171	3300032065	Soil	MSKKKRQRYLVRVVPGNGDLCPRCGVPMQIREYSNLTDKHLHRSYFYTRWFCCTNKNCRTTLVMPERYKVINPVMLNDG
Ga0318514_104409961	3300032066	Soil	VRKKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNNLTDKHLHRPYLYTRWFCCMNKSCRTTLVMPRRYKVTNPVTLGDALR
Ga0306924_105718802	3300032076	Soil	KKKRQRYLVRVVPGDGDPCPRCGVPMQIREYNDLTNKHPHRPYFYTRWFCCMNKSCPTTLVMPERYKVRANEKPEGNKPTR
Ga0306924_110370941	3300032076	Soil	MSKKKRQRYLVRVVPGDGDPCPRCSVPMQIREYNNLTDKHLHRPYFYTRWFCCMNKTCHTTLVMPERYKVRANASPAAKLIT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084321

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences