Metagenome / Metatranscriptome Family F084318

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F084318
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	77 residues
Representative Sequence	MDNTVIVALISSSGSVLVAITALVLNYRGFVSIDGRFASIERRLDMMQGDMKDLNKTMTALEIDVALLKDKAGL
Number of Associated Samples	69
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	49.11 %
% of genes near scaffold ends (potentially truncated)	27.68 %
% of genes from short scaffolds (< 2000 bps)	79.46 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (69.643 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (16.964 % of family members)
Environment Ontology (ENVO)	Unclassified (29.464 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (33.929 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.63% β-sheet: 0.00% Coil/Unstructured: 31.37%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01904	DUF72	4.55
PF12543	DUF3738	4.55
PF07992	Pyr_redox_2	2.73
PF13676	TIR_2	2.73
PF12867	DinB_2	2.73
PF02912	Phe_tRNA-synt_N	1.82
PF02416	TatA_B_E	1.82
PF00482	T2SSF	1.82
PF01850	PIN	1.82
PF14559	TPR_19	1.82
PF01050	MannoseP_isomer	1.82
PF00078	RVT_1	1.82
PF13384	HTH_23	0.91
PF00515	TPR_1	0.91
PF03571	Peptidase_M49	0.91
PF02321	OEP	0.91
PF07676	PD40	0.91
PF05985	EutC	0.91
PF00753	Lactamase_B	0.91
PF01934	HepT-like	0.91
PF02687	FtsX	0.91
PF02518	HATPase_c	0.91
PF01274	Malate_synthase	0.91
PF10431	ClpB_D2-small	0.91
PF09360	zf-CDGSH	0.91
PF11009	DUF2847	0.91
PF03683	UPF0175	0.91
PF07963	N_methyl	0.91
PF13343	SBP_bac_6	0.91
PF13202	EF-hand_5	0.91
PF00216	Bac_DNA_binding	0.91
PF07920	DUF1684	0.91
PF06296	RelE	0.91
PF04365	BrnT_toxin	0.91
PF04255	DUF433	0.91
PF00164	Ribosom_S12_S23	0.91
PF13277	YmdB	0.91
PF13635	DUF4143	0.91
PF01564	Spermine_synth	0.91
PF01641	SelR	0.91
PF03781	FGE-sulfatase	0.91
PF03572	Peptidase_S41	0.91
PF01807	zf-CHC2	0.91
PF13620	CarboxypepD_reg	0.91
PF02541	Ppx-GppA	0.91
PF09722	Xre_MbcA_ParS_C	0.91
PF01909	NTP_transf_2	0.91
PF06537	DHOR	0.91
PF02767	DNA_pol3_beta_2	0.91
PF12367	PFO_beta_C	0.91
PF00563	EAL	0.91
PF03548	LolA	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	4.55
COG0248	Exopolyphosphatase/pppGpp-phosphohydrolase	Signal transduction mechanisms [T]	1.82
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.82
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	1.82
COG0016	Phenylalanyl-tRNA synthetase alpha subunit	Translation, ribosomal structure and biogenesis [J]	1.82
COG2361	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.91
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.91
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.91
COG4737	Uncharacterized conserved protein	Function unknown [S]	0.91
COG4302	Ethanolamine ammonia-lyase, small subunit	Amino acid transport and metabolism [E]	0.91
COG3488	Uncharacterized conserved protein with two CxxC motifs, DUF1111 family	General function prediction only [R]	0.91
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.91
COG3358	Uncharacterized conserved protein, DUF1684 family	Function unknown [S]	0.91
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.91
COG2886	Predicted antitoxin, contains HTH domain	General function prediction only [R]	0.91
COG2834	Outer membrane lipoprotein-sorting protein	Cell wall/membrane/envelope biogenesis [M]	0.91
COG2445	Uncharacterized HEPN domain protein YutE, UPF0331/DUF86 family	General function prediction only [R]	0.91
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.91
COG2225	Malate synthase	Energy production and conversion [C]	0.91
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.91
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.91
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.91
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.91
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	0.91
COG0358	DNA primase (bacterial type)	Replication, recombination and repair [L]	0.91
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.64 %
Unclassified	root	N/A	30.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.64 %
Unclassified	root	N/A	30.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.64 %
Unclassified	root	N/A	30.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.36 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	29.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.68 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.79 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.36 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	19.64 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.68 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %
Candidatus Hydrogenedentes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.36 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	13.39 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.68 %
unclassified Candidatus Hydrogenedentes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes	0.89 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.36 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	8.93 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.68 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.89 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.89 %
Candidatus Hydrogenedentes bacterium ADurb.Bin101	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium ADurb.Bin101	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.36 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	5.36 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.57 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	2.68 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.68 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	0.89 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.89 %
Candidatus Hydrogenedentes bacterium ADurb.Bin101	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium ADurb.Bin101	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.36 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	5.36 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.68 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.89 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.89 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.89 %
Candidatus Hydrogenedentes bacterium ADurb.Bin101	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium ADurb.Bin101	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.36 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.68 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.89 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.89 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.89 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.89 %
Candidatus Hydrogenedentes bacterium ADurb.Bin101	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium ADurb.Bin101	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_101421322	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300004092\|Ga0062389_102703387	Not Available	661	Open in IMG/M
3300004795\|Ga0007756_10527028	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300005618\|Ga0068864_102379130	Not Available	536	Open in IMG/M
3300005618\|Ga0068864_102379130	Not Available	536	Open in IMG/M
3300006041\|Ga0075023_100274704	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300006050\|Ga0075028_100121468	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300006050\|Ga0075028_100330442	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300006050\|Ga0075028_100837702	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300006162\|Ga0075030_100691719	All Organisms → cellular organisms → Bacteria → Proteobacteria	807	Open in IMG/M
3300006162\|Ga0075030_101350933	Not Available	559	Open in IMG/M
3300006354\|Ga0075021_10771776	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300009163\|Ga0114970_10003905	All Organisms → cellular organisms → Bacteria	10865	Open in IMG/M
3300009163\|Ga0114970_10066358	All Organisms → cellular organisms → Bacteria	2292	Open in IMG/M
3300009500\|Ga0116229_10332833	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1277	Open in IMG/M
3300009500\|Ga0116229_10736946	Not Available	802	Open in IMG/M
3300009547\|Ga0116136_1153599	Not Available	583	Open in IMG/M
3300009628\|Ga0116125_1208920	Not Available	557	Open in IMG/M
3300009635\|Ga0116117_1081100	Not Available	805	Open in IMG/M
3300010396\|Ga0134126_10120392	All Organisms → cellular organisms → Bacteria	3208	Open in IMG/M
3300011120\|Ga0150983_12380285	Not Available	522	Open in IMG/M
3300012212\|Ga0150985_102687572	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300012357\|Ga0137384_11083597	Not Available	642	Open in IMG/M
3300012469\|Ga0150984_119798460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2699	Open in IMG/M
3300012469\|Ga0150984_119798460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2699	Open in IMG/M
3300012768\|Ga0138276_1072412	Not Available	558	Open in IMG/M
3300012768\|Ga0138276_1193918	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300012769\|Ga0138279_1184375	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2255	Open in IMG/M
3300014159\|Ga0181530_10574632	Not Available	554	Open in IMG/M
3300014169\|Ga0181531_10006446	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	6913	Open in IMG/M
3300014169\|Ga0181531_10032125	All Organisms → cellular organisms → Bacteria	3033	Open in IMG/M
3300014169\|Ga0181531_10066041	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2129	Open in IMG/M
3300014169\|Ga0181531_10341225	Not Available	918	Open in IMG/M
3300014169\|Ga0181531_10837862	Not Available	574	Open in IMG/M
3300014201\|Ga0181537_10036983	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3345	Open in IMG/M
3300014201\|Ga0181537_10041992	All Organisms → cellular organisms → Bacteria	3116	Open in IMG/M
3300014493\|Ga0182016_10480163	Not Available	722	Open in IMG/M
3300014495\|Ga0182015_10570803	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300014495\|Ga0182015_10639774	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	673	Open in IMG/M
3300014499\|Ga0182012_10176161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1519	Open in IMG/M
3300014499\|Ga0182012_10280188	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300014501\|Ga0182024_10000254	All Organisms → cellular organisms → Bacteria → Acidobacteria	132482	Open in IMG/M
3300014501\|Ga0182024_10000315	All Organisms → cellular organisms → Bacteria → Acidobacteria	121529	Open in IMG/M
3300014501\|Ga0182024_10423497	All Organisms → cellular organisms → Bacteria	1715	Open in IMG/M
3300014655\|Ga0181516_10532618	Not Available	604	Open in IMG/M
3300014658\|Ga0181519_10274443	Not Available	1050	Open in IMG/M
3300014838\|Ga0182030_10280789	All Organisms → cellular organisms → Bacteria	1861	Open in IMG/M
3300014838\|Ga0182030_10673389	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300015206\|Ga0167644_1020952	All Organisms → cellular organisms → Bacteria	2873	Open in IMG/M
3300017948\|Ga0187847_10133082	All Organisms → cellular organisms → Bacteria → Proteobacteria	1361	Open in IMG/M
3300018047\|Ga0187859_10411869	All Organisms → cellular organisms → Bacteria → Acidobacteria	743	Open in IMG/M
3300018088\|Ga0187771_10012868	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	6114	Open in IMG/M
3300019240\|Ga0181510_1137039	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300019260\|Ga0181506_1019627	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300019268\|Ga0181514_1494329	Not Available	520	Open in IMG/M
3300019268\|Ga0181514_1495184	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300019268\|Ga0181514_1515343	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	858	Open in IMG/M
3300019787\|Ga0182031_1548737	All Organisms → cellular organisms → Bacteria → Acidobacteria	1310	Open in IMG/M
3300019888\|Ga0193751_1003299	Not Available	9516	Open in IMG/M
3300021401\|Ga0210393_11665583	Not Available	505	Open in IMG/M
3300021405\|Ga0210387_10711345	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300024295\|Ga0224556_1045984	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	1083	Open in IMG/M
3300024295\|Ga0224556_1078924	Not Available	807	Open in IMG/M
3300025703\|Ga0208357_1113871	Not Available	790	Open in IMG/M
3300026555\|Ga0179593_1130442	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2533	Open in IMG/M
3300027736\|Ga0209190_1056318	All Organisms → cellular organisms → Bacteria	1958	Open in IMG/M
3300027736\|Ga0209190_1204494	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300027894\|Ga0209068_10577332	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300027911\|Ga0209698_10754126	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300028813\|Ga0302157_10603328	Not Available	566	Open in IMG/M
3300028866\|Ga0302278_10172879	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300028873\|Ga0302197_10076157	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300029883\|Ga0311327_10130971	All Organisms → cellular organisms → Bacteria	1801	Open in IMG/M
3300029907\|Ga0311329_10373239	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300029914\|Ga0311359_10658386	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	760	Open in IMG/M
3300029914\|Ga0311359_11048124	Not Available	546	Open in IMG/M
3300029922\|Ga0311363_11051672	Not Available	706	Open in IMG/M
3300029945\|Ga0311330_10124978	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2507	Open in IMG/M
3300029953\|Ga0311343_11075302	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	625	Open in IMG/M
3300029954\|Ga0311331_10930060	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	764	Open in IMG/M
3300029954\|Ga0311331_11685787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	509	Open in IMG/M
3300029999\|Ga0311339_10265760	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	1875	Open in IMG/M
3300029999\|Ga0311339_10872460	All Organisms → cellular organisms → Bacteria	858	Open in IMG/M
3300030007\|Ga0311338_10835494	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300030007\|Ga0311338_10994016	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	815	Open in IMG/M
3300030007\|Ga0311338_11553124	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300030399\|Ga0311353_11204218	Not Available	625	Open in IMG/M
3300030618\|Ga0311354_11744818	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300030688\|Ga0311345_11374177	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	502	Open in IMG/M
3300031231\|Ga0170824_103364256	Not Available	1219	Open in IMG/M
3300031234\|Ga0302325_10172633	All Organisms → cellular organisms → Bacteria → Acidobacteria	3802	Open in IMG/M
3300031234\|Ga0302325_10620912	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1584	Open in IMG/M
3300031234\|Ga0302325_11593493	Not Available	834	Open in IMG/M
3300031234\|Ga0302325_12798316	Not Available	572	Open in IMG/M
3300031236\|Ga0302324_100176614	All Organisms → cellular organisms → Bacteria	3450	Open in IMG/M
3300031236\|Ga0302324_101436050	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300031236\|Ga0302324_102186190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300031236\|Ga0302324_102938603	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300031524\|Ga0302320_10139909	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3697	Open in IMG/M
3300031524\|Ga0302320_10380832	Not Available	1795	Open in IMG/M
3300031524\|Ga0302320_10571152	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Hydrogenedentes → unclassified Candidatus Hydrogenedentes → Candidatus Hydrogenedentes bacterium ADurb.Bin101	1335	Open in IMG/M
3300031524\|Ga0302320_10853382	Not Available	996	Open in IMG/M
3300031524\|Ga0302320_11445482	Not Available	681	Open in IMG/M
3300031525\|Ga0302326_10514785	All Organisms → cellular organisms → Bacteria	1809	Open in IMG/M
3300031525\|Ga0302326_11259857	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1012	Open in IMG/M
3300031525\|Ga0302326_11847399	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300031525\|Ga0302326_13664571	Not Available	507	Open in IMG/M
3300031708\|Ga0310686_118937151	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300031788\|Ga0302319_10132803	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3405	Open in IMG/M
3300031788\|Ga0302319_11343590	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	648	Open in IMG/M
3300033405\|Ga0326727_10032880	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	9091	Open in IMG/M
3300033405\|Ga0326727_11155233	Not Available	545	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.75%
Host-Associated	Host-Associated	6.25%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.93%
Aquatic	Environmental → Aquatic	34.82%
Plants	Host-Associated → Plants	6.25%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	38.39%
Freshwater	Environmental → Aquatic → Freshwater	26.79%
Soil	Environmental → Terrestrial → Soil	20.54%
Sediment	Environmental → Aquatic → Sediment	8.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.79%
Peat Moss	Host-Associated → Plants → Peat Moss	1.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	38.39%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	19.64%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	8.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.04%
Lake	Environmental → Aquatic → Freshwater → Lake	6.25%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.79%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	1.79%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.89%
Loam	Environmental → Terrestrial → Soil → Loam	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	38.39%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	9.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.04%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	6.25%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.36%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	16.96%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	16.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	8.93%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	8.04%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	6.25%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.25%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	5.36%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	2.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.79%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.79%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.79%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.79%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	1.79%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.89%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.89%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004795	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012768	Freshwater microbial communities from Lake Montjoie, Canada - M_130710_M_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012769	Freshwater microbial communities from Lake Montjoie, Canada - M_140205_X_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014658	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019240	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019260	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025703	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300029883	I_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1014213222	3300004092	Bog Forest Soil	LDNTVLVALISSSGSVLVAITALLLNYWGFASMDARMLSLESRVDARLNLLQGDMKDLNKAMTALEIDVALLKDNAGR*
Ga0062389_1027033872	3300004092	Bog Forest Soil	LNYRGFSSIDARFSSLDARLLSFESRVDAGLNMMQDDMKDLNKAMTALEIDVALLKDNAGR*
Ga0007756_105270281	3300004795	Freshwater Lake	FNMDNTVIVALISAGGSVLVAITALVLNYRGFASIDARLNLMQSDMKDLYKAMTAIEVDVARLKDKVGL*
Ga0068864_1023791301	3300005618	Switchgrass Rhizosphere	LIGAGSSGLVAITALVLNYRGFTSIDARFSSLEGRITGFESRVDNRFNMMQSDMKDINKTMTALEIDVALLKDKAGI*
Ga0068864_1023791302	3300005618	Switchgrass Rhizosphere	MSETVTVALITAGGSVLVAVTALILNYRGFQSIDGRLNLMQTDMKDLNKAMTALEVDVALLKDRAGI*
Ga0075023_1002747042	3300006041	Watersheds	VDNNVIIALIGASSSGLVAITALVLNYRGFASIEATMNSRFASVDSRFASIERRLDMMQSDMKELNKTMTALEVDVALVKDKVGL*
Ga0075028_1001214681	3300006050	Watersheds	RSDSVMDNNVLVALIGASSSGLVAITALVLNYRGFSSIDSRFSSLEGAVNNRFASIERRLDLMQADMKDLNKSMTALEIDVALLKDKAGL*
Ga0075028_1003304422	3300006050	Watersheds	VDNNVIIALIGASSSGLVAITALVLNYRGFASIEATMNSRFASVDNRFASIERRLDMMQSDMKELNKTMTALEVDVALVKDKVGL*
Ga0075028_1008377022	3300006050	Watersheds	MDNNVLIALIGAGSSGLVAITALLLSYRGFASIDARFAAMDARFASIERRLDLMQTHMKDLNKTMTALEIDVALLKDKAGI*
Ga0075030_1006917192	3300006162	Watersheds	MDNTVIVALISSSGSVLIAITALVLNYRGFVSIDGRFASIERRLDMMQADMKDLNKTMTALEIDVALL*
Ga0075030_1013509331	3300006162	Watersheds	MDNAVIVALISSSGPVLIGIAALLLNYRGFVSIDHRLDLMQADMKDLNKAMTALEIDVALLKDKSGIR*
Ga0075021_107717762	3300006354	Watersheds	VDNNVIIALIGASSSGLVAITTLVLNYRGFASIEATMNSRFASIERRLDMMQSDMKELNKTMTALEVDVALVKDKVGL*
Ga0114970_1000390510	3300009163	Freshwater Lake	MEQPEMDNTVLVALISSGSSVFVAVTVLLLNYRGFVSIDARLNLMQADMKDLNKAMTALEIDVALLQG*
Ga0114970_100663585	3300009163	Freshwater Lake	MDNTVIVALISAGGSVLVAITALVLNYRGFASIDARLNLMQSDMKDLYKAMTAIEVDVARLKDKVGL*
Ga0116229_103328332	3300009500	Host-Associated	MDNTVIVALISAGGSVLIAITALVLNYRGFASIDGRFASLEARMLSFEGRVDARLNMLQSDMKDLNKTMTALELDVALLKDKAGL*
Ga0116229_107369462	3300009500	Host-Associated	MDNTVIVALISAGGSVLVAITALVLNYRGFASIDGRFASLEARMLSFEGRVDARLNMLQSDMKDLNKAMTALELDVALLKDKAGL*
Ga0116136_11535991	3300009547	Peatland	MDNTVVVALISSSGSVLIAITALVLNYRGFVSIDGRFASIERRLDMMQTDMKDLNKAMTALEIDVALLKDKAGSR*
Ga0116125_12089201	3300009628	Peatland	VDNTVLTALISTSGAALVAITALLLNYRGFAAIDSRLASLDSRVNSLESRVDMRFNSMQADMKDLNKAMTALEIDVALVKDKVGL*
Ga0116117_10811002	3300009635	Peatland	VDNTVLTALISTSGAALVAITALLLNYRGFAAIDSRLASLDSRVNSLESRVDMRFNSMQADMKDLNKAMTALEIDVALVKDKVGL
Ga0134126_101203923	3300010396	Terrestrial Soil	VANTVIVALISAGGSVLVAVTALILNYRGFASLDTRMHDLETRVDGRLNLMQTDMKDLNRAMTALEIDVALLKDKADR*
Ga0150983_123802851	3300011120	Forest Soil	VVVALISSSGSVLIAITALVLNYRGFVSIDGRFASIERRLDMMQADMKDLNKTMTALEIDVALLKDKAGF*
Ga0150985_1026875722	3300012212	Avena Fatua Rhizosphere	MLKLRDRAAAGMDNNVLIALIGASSSGLVAITALVLNYRGFNAIDGRFASLESSMNSRFASVDNRFASIERHLDMMQVDMKDLNKTMTALEVDVALVTDKVGL*
Ga0137384_110835972	3300012357	Vadose Zone Soil	SSVLVAITALLLNYRGFASLDGRFNAIDARFASIERRLDMLQTDMKDLNKTMTALEIDVALVKDKVGL*
Ga0150984_1197984601	3300012469	Avena Fatua Rhizosphere	DNNVLIALIGASSSGLVAITALVLNYRGFASMEATMNSRFASVDNRFASIERRLDMMQSDMKDLNRALTALEVDVALVKDKIGL*
Ga0150984_1197984602	3300012469	Avena Fatua Rhizosphere	MDNNVLIALIGASSSGLVAITALVLNYRGFNAIDGRFASLESSMNSRFASVDNRFASIERHLDMMQVDMKDLNKTMTALEVDVALVTDKVGL*
Ga0138276_10724121	3300012768	Freshwater Lake	NTVLVALISSGSSVFVAVTVLLLNYRGFVSIDARLNLMQADMKDLNKAMTALEIDVALLQG*
Ga0138276_11939181	3300012768	Freshwater Lake	AFNMDNTVIVALISAGGSVLVAITALVLNYRGFASIDARLNLMQSDMKDLYKAMTAIEVDVARLKDKVGL*
Ga0138279_11843752	3300012769	Freshwater Lake	VALISSGSSVFVAVTVLLLNYRGFVSIDARLNLMQADMKDLNKAMTALEIDVALLQG*
Ga0181530_105746322	3300014159	Bog	MDNTVIVALISSSGSVLVAITALVLNYRGFVSIDGRFASIERRLDMMQGDMKDLNKTMTALEIDVALLKDKAGL*
Ga0181531_100064466	3300014169	Bog	VANFDNTVIVALISSSGSVLVAIAALILNYRGFASIDARLNLLQSDMKDLNKSMTALEIDVALLNDKAGM*
Ga0181531_100321253	3300014169	Bog	MDNTIIVALITSGSSVLIAVTALLLNYRGFAAIDGRFSSIDARFSSIERRLDMMQSDMKDLNKTMTALEIDVALVKDKLKM*
Ga0181531_100660412	3300014169	Bog	MDNTVIVALISAGGSVLVAITALVLNYRGFASIDGRFASLEARMLAFEGRVDARLNMLQSNMKDLNKAMTALELDVALLKDKAGL*
Ga0181531_103412252	3300014169	Bog	MDNSVIVALISAGGSVLVAITALVLNYRGFASIDGRFASLEARMLSFEGRVDARLNMLQSDMKDLNKAMTALEIDVALLKDKASL*
Ga0181531_108378622	3300014169	Bog	MDNTIILAFISSGGSVLIAVTALLLNYRGFVSIDGRFASVERRLDTMQADMKDLNKTMTALEIDVALVRDKLKM*
Ga0181537_100369832	3300014201	Bog	MDNTVIVALISAGGSVLVAITALVLNYRGFASIDGRFASLEARMLAFEGRVDARLNMLQSDMKDLNKAMTALELDVALLKDKAGL*
Ga0181537_100419923	3300014201	Bog	MDNTIILAFISSGGSVLIAVTALLLNYRGFVSIDGRFASVERRLDMMQADMKDLNKTMTALEIDVALVKDKLKM*
Ga0182016_104801632	3300014493	Bog	VGNSVLTALISTSGAGVVAITAVLLNYRGFASMDSRFASLESTVNSRFGSVEHRLDMLQADMKDLNKAVTALEIDVALVKDKIGL*
Ga0182015_105708032	3300014495	Palsa	MLETNVLIALIGASSSGLVAITALVLNYRGFSSIDGRFASLERRLDLMQADMKDLNRSMTALE
Ga0182015_106397742	3300014495	Palsa	VDNNGLSGACSSGLVAITALLLNYRGFAAIDSRSASIDNRFASIERRLDMMQSDMKDLNKTMTALEIDVALIKDKTGR*
Ga0182012_101761612	3300014499	Bog	MDNTLIVALISSGGSVLVAITALALNYRGFAFIEGRFASIERRLDTMQNDMKDLNKTMTAVEIDVALLKDKVGM*
Ga0182012_102801882	3300014499	Bog	MGKRAEMDNTVIVALISSSGSVLIAITALVLNYRGFVSIDGRFASIERRLDMMQTDMKDLNKAMTALEIDVALLKDKADL*
Ga0182024_1000025481	3300014501	Permafrost	MDNNVLIALIGAGSSGLVAITALLLNYRGFSSIDGRFAALENRFSAIDGRFAALDRRLESMQQDMKDLNRSMTALEVDVALVKDKVGL*
Ga0182024_1000031548	3300014501	Permafrost	VDNNVLIALIGTGSSGLVAITALVLNYRGFASIDARMTSLEGRVDARFNSMQADMRDLNKTMTAVESDVALLKDKVGL*
Ga0182024_104234971	3300014501	Permafrost	MDNTVIVALISSSGSVLVAITALVLNNRGFASIDARMLSLETRVDSRLNLMQADMKDLNKAMTALEIDVALLKDKAGL*
Ga0181516_105326181	3300014655	Bog	VESSVIVALISSVPVAVTTLVLNYRGFASIDSRFASLESRMLAFESRVDARLNMMQSDMKDLNKAMIALELDV
Ga0181519_102744433	3300014658	Bog	VDNSVLTALISTSGAGVVAITALLLNYRGFASMDSRFASLESTVNSRFGSVEHRLDMLQADMKDLNKAVTALEIDVALVKDKIGL*
Ga0182030_102807893	3300014838	Bog	MGKRAEMDNTVIVALISSSCSVLIAITALVLNYRGFVSIDGRFASIERRLDMMQTDMKDLNKAMTALEIDVALLKDKADL*
Ga0182030_106733892	3300014838	Bog	MDNTIIVALIGSSGSVLIAITALVLNYRGFVSIDGRFASIERRLDMMQADMKDLNKTMTALETQLRPV*
Ga0167644_10209525	3300015206	Glacier Forefield Soil	MDNTVIVALISSGGSVLVAITALLLNYRGFVSLEGRLNMMQADMKDLNKAMTALEVDVALLKDRARL*
Ga0187847_101330821	3300017948	Peatland	VDNTVLTALISTSGAALVAITALLLNYRGFAAIDSRLASLDSRVNSLESRVDMRFNSMQADMKDLNKAMTALEIDVAL
Ga0187859_104118692	3300018047	Peatland	MDNTVIVALISSSGSVLIAITALVLNYRGFVSIDGRFASIERRLDMMQTDMKDLNKAMTALEIDVALLKDKAGL
Ga0187771_100128686	3300018088	Tropical Peatland	MDNTVIVALVSASGSALVAVTALVLNYRGFASIDSRFASFEARLLAFESKVEARFNLLQSDMKDLNRAMTALEVDVALLKDNAGL
Ga0181510_11370391	3300019240	Peatland	MDNTIILAFISSGGSVLIAVTALLLNYRGFVSIDGRFASVERRLDMMQADMKDLNKTMTALEIDVALVKDKLKM
Ga0181506_10196272	3300019260	Peatland	VANFDNTVIVALISSSGSVLVAIAALILNYRGFASIDARLNLLQSDMKDLNKSMTALEIDVALLNDKAGM
Ga0181514_14943291	3300019268	Peatland	MDNTIIVALITSGSSVLIAVTALLLNYRGFAAIDGRFSSIDARFSSIERRLDMMQSDMKDLNKTMTALEIDVALVKDKLKM
Ga0181514_14951841	3300019268	Peatland	DNTVIVALISSSGSVLVAIAALILNYRGFASIDARLNLLQSDMKDLNKSMTALEIDVALLKDKAGM
Ga0181514_15153432	3300019268	Peatland	DNTVIVALISAGGSVLVAITALVLNYRGFASIDGRFASLEARMLAFEGRVDARLNMLQSDMKDLNKAMTALELDVALLKDKAGL
Ga0182031_15487373	3300019787	Bog	VDNSVLTALISTSGAGVVAITALLLNYRGFASMDSRFASLESTVNSRFGSVEHRLDMLQADMKDLNKAVTALEIDVALVKDKIGL
Ga0193751_100329914	3300019888	Soil	MSDNVLVAMIGAASSGLVAVTALLLNYRGFASLDARMNLMQTDMKDLNKAMTAIEIDIALLKDKAGL
Ga0210393_116655832	3300021401	Soil	MDNAVIVALISSGGSVLVAMTALVLNYRGFASIDARFGSIDGRIQSLESRIDARLNLMQTDMRDLNKSMTALEIDVELLKGKAGL
Ga0210387_107113451	3300021405	Soil	VLVAMTALILNYRGFAAMEGRFASMDSRFASMDSRFASIERRLDVLQTDMKDLNKTMTALEIDVALVKDKVGL
Ga0224556_10459842	3300024295	Soil	MDNNVLIALIGASGSGLVAITALVLNYRGFASIEATMNSRFASVDNRFASIERRLDMMQADMKDLNKTMTALEVDVALVKDKVGL
Ga0224556_10789242	3300024295	Soil	MDSAAITAIVSSGSSVLIAVTALALNYRGFVSIDGRFASIERRLDMMQADMKDLNKTMTALEIGVALLKDKAGM
Ga0208357_11138711	3300025703	Arctic Peat Soil	VDNTVIVALISASGSVLVAITALALNYRGFASLDTRMTSLEARVDGRFNSMQADMKDLNKTMTAVEIDVALLKDKVGL
Ga0179593_11304424	3300026555	Vadose Zone Soil	MDNTIIVALTSAGGPVLVAVTALVLNYRGFASINGGFGSLESRMLSFESRLDARLNLLHADMKDLNKTMTALEIDVALLKDKVGL
Ga0209190_10563182	3300027736	Freshwater Lake	MDNTVLVALISSGSSVFVAVTVLLLNYRGFVSIDARLNLMQADMKDLNKAMTALEIDVALLQG
Ga0209190_12044941	3300027736	Freshwater Lake	MDNTVIVALISAGGSVLVAITALVLNYRGFASIDARLNLMQSDMKDLYKAMTAIEVDVARLKDKVGL
Ga0209068_105773322	3300027894	Watersheds	VDNNVIIALIGASSSGLVAITTLVLNYRGFASIEATMNSRFASIERRLDMMQSDMKELNKTMTALEVDVALVKDKVGL
Ga0209698_107541261	3300027911	Watersheds	MDNAVIVALISSSGPVLIGIAALLLNYRGFVSIDHRLDLMQADMKDLNKAMTALEIDVALLKDKSGIR
Ga0302157_106033281	3300028813	Bog	MDNNVLIALIGAGSSGLVAITALLLNYRGFSSIDARFASLDGRIAAIETRFDRRLDSMQQDMKDLNRSMAALEIDVALVKDKVGL
Ga0302278_101728792	3300028866	Bog	MDNNVLIALIGTGSSGLVAITALLLNYRGFSSIDARFASLDGRIAAIETRFDRRLDSMQQDMKDLNRSMAALEIDVALVKDKVGL
Ga0302197_100761572	3300028873	Bog	VAITALLLNYRGFASMDSRFASLESAVNSRFGSVEHRLDMLQADMKDLNKAVTALEIDVALVKDKIGL
Ga0311327_101309712	3300029883	Bog	MDNNVLIALIGAGSSGLVAITALLPNYRGFASIDGRFAAMDGRFAAIDNRFASIERRLDALQQDMKDLNKSMTALEIDVALVKDKVGL
Ga0311329_103732392	3300029907	Bog	SPYLLPAPPECGNFDTSMDNNVLIALVGAGSSGLVAITALLPNYRGFASIDGRFAAMDGRFAAIDNRFASIERRLDALQQDMKDLNKSMTALEIDVALVKDKVGL
Ga0311359_106583861	3300029914	Bog	VDHNVLIALIGASSSCLVAITALVLNYRGFSSIDSRFASIDGRFASIERRLEMMQNDMKDLNKTMTALEIDVALLKDKAGL
Ga0311359_110481242	3300029914	Bog	NSRQVDHNVLIALIGASSSGVVAITALILNYRGFSSIDSRFASIDGRFASIERRLEMMQNDMKDLNKTMTALEIDVALLKDNAGL
Ga0311363_110516722	3300029922	Fen	MDNNVLIALVGAGSSGLVAITALLPNYRGFASIDGRFAAMDGRFAAIDNRFASIERRLDALQQDMKDLNKSMTALEIDVALVKDKVGL
Ga0311330_101249783	3300029945	Bog	MDNNVLIALVGAGSSGLVAITALLPNYRGFASIDGRFAAMDGRFAAIDNRFASIERRLDSMQQDMKDLNKSMTALEIDVALVKDKVGL
Ga0311343_110753021	3300029953	Bog	VDHNVLIALIGASSSGVVAITALILNYRGFSSIDSRFASIDGRFASIERRLEMMQNDMKDLNKTMTALEIDVALLKDNAGL
Ga0311331_109300602	3300029954	Bog	CLVAITALVLNYRGFSSIDSRFASIDGRFASIERRLEMMQNDMKDLNKTMTALEIDVALLKDKAGL
Ga0311331_116857872	3300029954	Bog	MDNTIISAFISSGGSVLIAVTALLLNYRGFVSIDGRFASVERRLDMMQSDMKDLNKTMTALEIDVTLVKDKLKM
Ga0311339_102657602	3300029999	Palsa	VLIAVTALLLNYRGFVSIDGRFASVERRLDMMQSDMKDLNKTMTALEIDVALVKDKLKM
Ga0311339_108724602	3300029999	Palsa	VANFDNTVIVALISTSGSVLVAIAALILNYRGFASIDARLNLLQSDMKDLNKSMTALEIDVALLEDKAGM
Ga0311338_108354942	3300030007	Palsa	MDNTIAFISSGGSVLIAVTALLLNYRGFVSIDGRFASVERRLDMMQSDMKDLNKTMTALEIDVALVKDKLKM
Ga0311338_109940161	3300030007	Palsa	LEVANFDNTVIVALISTSGSVLVAIAALILNYRGFASIDARLNLLQSDMKDLNKSMTALEIDVALLKDKAGM
Ga0311338_115531242	3300030007	Palsa	PRCMCAMPRRYYVDVASIDKTVVVALISSSGSVLIAITALILNYRGFASIDARMLALESRVDSRFNLMQTDMKDLNKAMTALEVDLALVKDKVGI
Ga0311353_112042182	3300030399	Palsa	MDNTVILAFISSGGSVLIAVTALLLNYRGFVSIDGRFASVERRLDMMQSDMKDLNKTVTALEIDVALVKDKLKM
Ga0311354_117448182	3300030618	Palsa	VLIAITALILNYRGFASIDARMLALESRVDSRFNLMQTDMKDLNKAMTALEVDLALVKDKVGI
Ga0311345_113741772	3300030688	Bog	LIGASSSCLVAITALVLNYRGFSSIDSRFASIDGRFASIERRLEMMQNDMKDLNKTMTALEIDVALLKDKAGL
Ga0170824_1033642562	3300031231	Forest Soil	MDNTVIVALISSSSATLVAIAALILNYRGFSSIDSRLNLMQVDMKDLNKTMTAIETDVAVLKDRAGIK
Ga0302325_101726333	3300031234	Palsa	DVASIDKTVVVALISSSGSVLIAITALILNYRGFASIDARMLALESRVDSRFNLMQTDMKDLNKAMTALEVDLALVKDKVGI
Ga0302325_106209121	3300031234	Palsa	SVHRVLPWVSISPRPSDTGVGWLKLDMDNNVLIALITASSSVLVAITALLLNYRGFTSLEAGMAAIGTRFTSLEGRVDQRFSSMQQDMKDLNKSMTALEIDVALVKDKVGL
Ga0302325_115934931	3300031234	Palsa	MDNTVIVALISSSGSVLVAMTALILNYRGFASIDARMLALESRVDARFNLMQSDMKDLNKAMTALEVDVALLKDKAGI
Ga0302325_127983161	3300031234	Palsa	MDNTVIVALISAGGSVLVAITALVLNYRGFASIDGRFASLEARMLAFEGRVDARLNMLQSDMKDLNKAMTALELDVALLKDKAGL
Ga0302324_1001766143	3300031236	Palsa	MCAMPRRYYVDVASIDNTVVVALISSSGSVLIAITALILNYRGFASIDARMLALESRVDSRFNLMQTDMKDLNKAMTALEVDLALVKDKVGI
Ga0302324_1014360502	3300031236	Palsa	MGMDNSVLIALIGASSSCLVAITALVLNYRGFTSIDGRFASIERRLDMMQTDMKDLNKTMTALEINVALLKGKVGL
Ga0302324_1021861901	3300031236	Palsa	MDNTVFVALISSGGSVLVAVTALLLNYRGFASLESRLNMMQNDMKDLNKAMTALEVDLPLLKDRARL
Ga0302324_1029386032	3300031236	Palsa	LLLNYRGFASLDTTRMTSLENRVDARLNALQQDMKDLNKTMTALEIDVAMVKDKVGL
Ga0302320_101399095	3300031524	Bog	MDSAAITAIVSSGSSVLIAVTALALNYRGFVSIDGRFASIERRLDMMQADMKDLNKTMTALEIDVALLKDKAGM
Ga0302320_103808321	3300031524	Bog	MDNSVLIALIGAGSSGLVAITALLLNYRGFASIDSRFSSLENRFSAFESSVNNRFSSLDRRLDMLQSDMKDLNKTMTALEIDVAILKDKAGI
Ga0302320_105711521	3300031524	Bog	LVAITALLPNYRGFASIDGRFAAMDGRFAAIDNRFASIERRLDALQQDMKDLNKSMTALEIDVALVKDKVGL
Ga0302320_108533821	3300031524	Bog	ILNYRGFTSIDGRFASLEATMNNRFASIDNRFASIERRLDLMQSDMKDLNKSMTALEVDVALVKDKVGL
Ga0302320_114454821	3300031524	Bog	MDNSIIVALISAGGSVLIALTAPILNYRGFTSIDARFGLIDARFSSLESLLVSFESRVDARLNLMQADMKDLNKTMTALEIDVALLKDKAGI
Ga0302326_105147851	3300031525	Palsa	LEVANFDNTVIVALISTSGSVLVAIAALILNYRGFASIDARLNLLQSDMKDLNKSMTALEIDLALLKDKAGM
Ga0302326_112598572	3300031525	Palsa	MGMDNSVLIALIGASSSCLVAITALLLNYRGFASLDTTRMTSLENRVDARLNALQQDMKDLNKTMTALEIDVAMVKDKVGL
Ga0302326_118473992	3300031525	Palsa	VANFDNTVIVALISSSGSVLVAITALILNYRGFASIDARLNLLQSDMKDLNKSMTALEIDVALLR
Ga0302326_136645712	3300031525	Palsa	MDNTVIVGLIGAGGSVLIAVTALLLNYRGFASLDARLLSLESRVDARLNMMQSDMKDLNKTMTALEIDVALLKDKAGI
Ga0310686_1189371512	3300031708	Soil	MDNTVLVALISSSGAVLIGITALLLNYRGFLSIDHRLDLMQADMKDLNKAMTALEVDVALLKDRAGL
Ga0302319_101328031	3300031788	Bog	MDNTVSVALISSSGPVLIGIAALLLNYRGFVSIDHRIDLMQADTKNLNKAMTALEIDVALLNDKAGIH
Ga0302319_113435901	3300031788	Bog	RKQSGSSATERADNTVIVALISSGGSVLVAVTALLLNYRGFASIDARLNLMQSDMKDLYKAMTAIEVNVARLKDKAGLQ
Ga0326727_100328807	3300033405	Peat Soil	VAITALLLNYRGFASMDSRFASLESTVNSRFGSVEHRLDMLQADMKDLNKAVTALEIDVALVKDKIGL
Ga0326727_111552332	3300033405	Peat Soil	MDNTVIVALISSGGSVLIGITALFLNYRGFVSIDHRLDLMQADMRDLNKTMTALEIGVARLK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084318

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences