Metagenome / Metatranscriptome Family F084317

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084317
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	73 residues
Representative Sequence	MSFHALPVGSRVRVTSYSPFREQWGTVRDVHTIAADLEEPFCFYLIALDSGQRKEPIWFDYSEVELITSSLVALQES
Number of Associated Samples	75
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.69 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	74.11 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.500 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil (26.786 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.357 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.86% β-sheet: 27.62% Coil/Unstructured: 69.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00903	Glyoxalase	2.68
PF12679	ABC2_membrane_2	2.68
PF00106	adh_short	2.68
PF00805	Pentapeptide	1.79
PF01075	Glyco_transf_9	1.79
PF07311	Dodecin	1.79
PF10604	Polyketide_cyc2	1.79
PF00561	Abhydrolase_1	0.89
PF13411	MerR_1	0.89
PF01527	HTH_Tnp_1	0.89
PF02894	GFO_IDH_MocA_C	0.89
PF00391	PEP-utilizers	0.89
PF13649	Methyltransf_25	0.89
PF12681	Glyoxalase_2	0.89
PF12773	DZR	0.89
PF00485	PRK	0.89
PF00266	Aminotran_5	0.89
PF01609	DDE_Tnp_1	0.89
PF08803	ydhR	0.89
PF00486	Trans_reg_C	0.89
PF01243	Putative_PNPOx	0.89
PF00578	AhpC-TSA	0.89
PF00732	GMC_oxred_N	0.89
PF12158	DUF3592	0.89
PF13481	AAA_25	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0859	ADP-heptose:LPS heptosyltransferase	Cell wall/membrane/envelope biogenesis [M]	1.79
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	1.79
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	1.79
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.89
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.89
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.89
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.89
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.89
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.89
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.89
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.39 %
Unclassified	root	N/A	36.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.50 %
Unclassified	root	N/A	36.61 %
Viruses	superkingdom	All Organisms → Viruses	0.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.50 %
Unclassified	root	N/A	36.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	54.46 %
Unclassified	root	N/A	36.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	51.79 %
Unclassified	root	N/A	36.61 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.79 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.61 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	11.61 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	4.46 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.89 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.61 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	9.82 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.46 %
Thermogemmatisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Thermogemmatisporales	0.89 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.89 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.61 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	9.82 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.46 %
Thermogemmatisporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Thermogemmatisporales → Thermogemmatisporaceae	0.89 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.89 %
Eubacteriales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.61 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	7.14 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.46 %
unclassified Ktedonobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae	1.79 %
Thermogemmatispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Thermogemmatisporales → Thermogemmatisporaceae → Thermogemmatispora	0.89 %
Clostridiales Family XVII. Incertae Sedis	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis → Clostridiales Family XVII. Incertae Sedis	0.89 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.61 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	6.25 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.46 %
Ktedonobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	1.79 %
Thermogemmatispora carboxidivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Thermogemmatisporales → Thermogemmatisporaceae → Thermogemmatispora → Thermogemmatispora carboxidivorans	0.89 %
unclassified Ktedonobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter	0.89 %
Sulfobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis → Clostridiales Family XVII. Incertae Sedis → Sulfobacillus	0.89 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.61 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	6.25 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.46 %
Ktedonobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	1.79 %
Ktedonobacter sp. 13_1_20CM_3_54_15	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_1_20CM_3_54_15	0.89 %
Thermogemmatispora carboxidivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Thermogemmatisporales → Thermogemmatisporaceae → Thermogemmatispora → Thermogemmatispora carboxidivorans	0.89 %
Sulfobacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis → Clostridiales Family XVII. Incertae Sedis → Sulfobacillus	0.89 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003861\|Ga0031654_10023307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	1794	Open in IMG/M
3300004152\|Ga0062386_101356991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	592	Open in IMG/M
3300004468\|Ga0068977_1284667	All Organisms → cellular organisms → Bacteria	2103	Open in IMG/M
3300004478\|Ga0068972_1586740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	510	Open in IMG/M
3300004593\|Ga0068946_1180149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	751	Open in IMG/M
3300005166\|Ga0066674_10454692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	584	Open in IMG/M
3300005167\|Ga0066672_10039076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2657	Open in IMG/M
3300005184\|Ga0066671_10460600	Not Available	816	Open in IMG/M
3300005445\|Ga0070708_101950115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	544	Open in IMG/M
3300005556\|Ga0066707_10874587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	552	Open in IMG/M
3300005764\|Ga0066903_101514789	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300005764\|Ga0066903_101738067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1189	Open in IMG/M
3300006050\|Ga0075028_100160837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1192	Open in IMG/M
3300006050\|Ga0075028_100164251	Not Available	1181	Open in IMG/M
3300006050\|Ga0075028_100301763	Not Available	893	Open in IMG/M
3300006052\|Ga0075029_101266416	Not Available	517	Open in IMG/M
3300006059\|Ga0075017_100734482	Not Available	761	Open in IMG/M
3300006086\|Ga0075019_10476978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	771	Open in IMG/M
3300006086\|Ga0075019_10828395	Not Available	591	Open in IMG/M
3300006102\|Ga0075015_100132679	All Organisms → Viruses → Predicted Viral	1282	Open in IMG/M
3300006102\|Ga0075015_100489761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	707	Open in IMG/M
3300006102\|Ga0075015_100718258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	594	Open in IMG/M
3300006354\|Ga0075021_10827880	Not Available	599	Open in IMG/M
3300006796\|Ga0066665_10078795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2361	Open in IMG/M
3300006796\|Ga0066665_10341616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1218	Open in IMG/M
3300006796\|Ga0066665_10826956	Not Available	727	Open in IMG/M
3300009090\|Ga0099827_10516183	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300009520\|Ga0116214_1000730	All Organisms → cellular organisms → Bacteria	13060	Open in IMG/M
3300009520\|Ga0116214_1003925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5412	Open in IMG/M
3300009520\|Ga0116214_1013550	Not Available	2887	Open in IMG/M
3300009520\|Ga0116214_1046434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1573	Open in IMG/M
3300009520\|Ga0116214_1386749	Not Available	545	Open in IMG/M
3300009521\|Ga0116222_1200803	Not Available	859	Open in IMG/M
3300009522\|Ga0116218_1001937	All Organisms → cellular organisms → Bacteria	12205	Open in IMG/M
3300009525\|Ga0116220_10072737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1443	Open in IMG/M
3300009700\|Ga0116217_10084723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2194	Open in IMG/M
3300009700\|Ga0116217_10222600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1233	Open in IMG/M
3300009824\|Ga0116219_10486593	Not Available	683	Open in IMG/M
3300010337\|Ga0134062_10542900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	590	Open in IMG/M
3300010379\|Ga0136449_100150749	All Organisms → cellular organisms → Bacteria	4563	Open in IMG/M
3300010379\|Ga0136449_100880335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1463	Open in IMG/M
3300010379\|Ga0136449_101924952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	877	Open in IMG/M
3300011089\|Ga0138573_1153311	Not Available	568	Open in IMG/M
3300012198\|Ga0137364_10475405	Not Available	939	Open in IMG/M
3300012200\|Ga0137382_10615743	Not Available	776	Open in IMG/M
3300012201\|Ga0137365_10018468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	5442	Open in IMG/M
3300012201\|Ga0137365_10891686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	649	Open in IMG/M
3300012201\|Ga0137365_11319503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	511	Open in IMG/M
3300012208\|Ga0137376_11243469	Not Available	634	Open in IMG/M
3300012209\|Ga0137379_10259713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	1649	Open in IMG/M
3300012209\|Ga0137379_11262896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	645	Open in IMG/M
3300012209\|Ga0137379_11594383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	552	Open in IMG/M
3300012350\|Ga0137372_10346658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1138	Open in IMG/M
3300012351\|Ga0137386_10526686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	851	Open in IMG/M
3300012354\|Ga0137366_10465100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	916	Open in IMG/M
3300012359\|Ga0137385_10238608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1577	Open in IMG/M
3300012359\|Ga0137385_10352507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	1260	Open in IMG/M
3300012361\|Ga0137360_10559964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	977	Open in IMG/M
3300012971\|Ga0126369_10153694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2167	Open in IMG/M
3300012977\|Ga0134087_10358074	Not Available	699	Open in IMG/M
3300017821\|Ga0187812_1009755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	3324	Open in IMG/M
3300017821\|Ga0187812_1113840	Not Available	880	Open in IMG/M
3300017932\|Ga0187814_10219795	Not Available	716	Open in IMG/M
3300017932\|Ga0187814_10312003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	603	Open in IMG/M
3300017942\|Ga0187808_10459311	Not Available	587	Open in IMG/M
3300017943\|Ga0187819_10719388	Not Available	562	Open in IMG/M
3300017955\|Ga0187817_10026857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3466	Open in IMG/M
3300017955\|Ga0187817_11059802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	520	Open in IMG/M
3300017959\|Ga0187779_10146256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1455	Open in IMG/M
3300017959\|Ga0187779_10568539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	756	Open in IMG/M
3300017966\|Ga0187776_11159195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	577	Open in IMG/M
3300018001\|Ga0187815_10375848	Not Available	604	Open in IMG/M
3300018431\|Ga0066655_10458465	Not Available	842	Open in IMG/M
3300018433\|Ga0066667_10120325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1793	Open in IMG/M
3300018468\|Ga0066662_12063368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	597	Open in IMG/M
3300018482\|Ga0066669_10616417	Not Available	952	Open in IMG/M
3300020581\|Ga0210399_10429721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1101	Open in IMG/M
3300021478\|Ga0210402_10205568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Thermogemmatisporales → Thermogemmatisporaceae → Thermogemmatispora → Thermogemmatispora carboxidivorans	1810	Open in IMG/M
3300021559\|Ga0210409_10362166	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300021560\|Ga0126371_12126649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	676	Open in IMG/M
3300021560\|Ga0126371_13569913	Not Available	525	Open in IMG/M
3300026538\|Ga0209056_10009861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	9723	Open in IMG/M
3300026538\|Ga0209056_10684440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	518	Open in IMG/M
3300027497\|Ga0208199_1012792	Not Available	1932	Open in IMG/M
3300027497\|Ga0208199_1017717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1604	Open in IMG/M
3300027604\|Ga0208324_1003346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5865	Open in IMG/M
3300027604\|Ga0208324_1008496	Not Available	3426	Open in IMG/M
3300027604\|Ga0208324_1064430	Not Available	1051	Open in IMG/M
3300027894\|Ga0209068_10199948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1099	Open in IMG/M
3300027902\|Ga0209048_10007160	All Organisms → cellular organisms → Bacteria	10338	Open in IMG/M
3300027902\|Ga0209048_10126745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1932	Open in IMG/M
3300027911\|Ga0209698_10522545	Not Available	918	Open in IMG/M
3300027911\|Ga0209698_10767159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	730	Open in IMG/M
3300027915\|Ga0209069_10402866	Not Available	750	Open in IMG/M
3300030494\|Ga0310037_10003558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	7892	Open in IMG/M
3300030494\|Ga0310037_10003744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → unclassified Ktedonobacter → Ktedonobacter sp. 13_1_20CM_3_54_15	7689	Open in IMG/M
3300031910\|Ga0306923_11768327	Not Available	636	Open in IMG/M
3300032160\|Ga0311301_10054275	All Organisms → cellular organisms → Bacteria	9017	Open in IMG/M
3300032160\|Ga0311301_10059964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis → Clostridiales Family XVII. Incertae Sedis → Sulfobacillus	8345	Open in IMG/M
3300032160\|Ga0311301_11287220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	926	Open in IMG/M
3300032770\|Ga0335085_10516000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1361	Open in IMG/M
3300032892\|Ga0335081_10635894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1309	Open in IMG/M
3300033289\|Ga0310914_10994865	Not Available	739	Open in IMG/M
3300033806\|Ga0314865_139701	Not Available	643	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.11%
Aquatic	Environmental → Aquatic	25.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.11%
Sediment	Environmental → Aquatic → Sediment	14.29%
Freshwater	Environmental → Aquatic → Freshwater	11.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.18%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	14.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.25%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.68%
Loam	Environmental → Terrestrial → Soil → Loam	2.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	14.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.39%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	8.04%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.36%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.79%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%

Habitat	Taxonomy	Distribution
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	26.79%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.18%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	14.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.82%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	8.04%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.57%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.57%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.79%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.89%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004468	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 74 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004478	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004593	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 34 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004611	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 10 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011089	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033806	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0031654_100233072	3300003861	Freshwater Lake Sediment	MSFRALPAGSRVRVTSYGPFREQWGTVRDVHTIAADLEEPFCYYLIAFDSGQRKEPIWFDYSEVELITSSLVALQES*
Ga0062386_1013569911	3300004152	Bog Forest Soil	MTYQILPVGSRVRVTSYGPFREHWGTVLDVHTISADFEEPFCFYLLALDSGQRKEPIWFEYDEVELITSSLVALQER*
Ga0068977_12846673	3300004468	Peatlands Soil	MTYQVLPVGSRVRVTSYGPFREHWGTVRDVHTIAPDLEEPFCFYLLALDSGQRKEPIWFEYGEVELITSSLVALQER*
Ga0068972_15867401	3300004478	Peatlands Soil	MSFRVLPVGSRVRVISYSPFREQWGTVRDVHTIAADLEEPFCFYLIALDSGQRKEPIWFDYNEVELITSSLVALQES*
Ga0068946_11801491	3300004593	Peatlands Soil	MTYQVLPVGSRVRVTSYGPFREHWGTVRDVHTIAPDLEEPFCFYLIALDSGQRKEPIWFEYGEVELITSSLVALQER*
Ga0068925_13042551	3300004611	Peatlands Soil	EHWGTVGDVHTIAPDLEEPFCFYLLALDSGQRKEPIWFEYGEVELITSSLVALQER*
Ga0066674_104546921	3300005166	Soil	MTDHVLPVGSRVRVTSYGPFRERWGTVCDVHTISPDLEEPFCFYLVALDSGQRKEPIWFEYSEVELITSSLVALQER*
Ga0066672_100390762	3300005167	Soil	MIYHVLPLGSRVRVISYGPFREHWGTVLDVHMIDADLEEPFCFYLIALDSGQRKEPIWFDYTEIELITSSLVALQES*
Ga0066671_104606001	3300005184	Soil	MSFRFLPVGSRVRVSSYGPFREQWGTVRDVHTIAADLEEPFCFYLIALDSGQRKEPIWFDYSEVELITSSLVALQER*
Ga0070708_1019501151	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VGDEIHILQVGSRVRVTSYGPFRELRGTIRTVDTIPADLKEPFCFYLVALDGTNSKEPIWFDYREVKPMISSIPPLQEI*
Ga0066707_108745871	3300005556	Soil	LEGVRHSMTYRVLPVGSRVRVTSYGPFREQWGTIRDVHTIAADLEEPFCYYLVALDSGQRKEPIWFDYSEVELITSSLFALSER*
Ga0066903_1015147891	3300005764	Tropical Forest Soil	MTYSVLPVGSRVRVTSYGPFREQWGTVLDVHTIAADLEEPFCYYLIALDGSRKKEPIWFDYSEVELITSSLVPLKAY*
Ga0066903_1017380672	3300005764	Tropical Forest Soil	MTHHTLPVGSRVRVTSYGPFREQWGTVSAVHTIDADLEEPFCFYLITFDNGQIKEPIWFDYSEVEPITSSLFALQET*
Ga0066651_104722751	3300006031	Soil	GTVRDVHTIAADLEEPFCFYLIAFDSGQRKEPIWFDYSEVELITSSLVALQER*
Ga0075028_1001608372	3300006050	Watersheds	MSFRALPVGSRVRVTSYSPFREHWGTVRDVHTIAADLEDPFCFYLIAFDSGQRKEPIWFDYSEVELITSS
Ga0075028_1001642512	3300006050	Watersheds	MSFRALPAGSRVRVTSYSPFREQWGTVIDVHTIAADLEEPFCFYLISLDSGQRKEPIWFDYNEIELITSSLVALQES*
Ga0075028_1003017632	3300006050	Watersheds	MSFCALPVGSRVRVTSYSPFREQWGTVRDVHTIAADLEEPFCFYLIALDSGQGKEPIWFDYSEVELITSSLVAIQES*
Ga0075029_1012664162	3300006052	Watersheds	MSFRALPVGSRVRVTSYSPFREQWGTVRDVHTIAADLEEPFCFYLIAFDSGQRKEPIWFDYSEVELITSSLVALQES*
Ga0075017_1007344822	3300006059	Watersheds	VRVTSYSPFREQWGTVRDVHTIAADLEEPFCFYLIAFDSGQRKEPIWFDYSEVELITSSLVALQES*
Ga0075019_104769782	3300006086	Watersheds	MTYQVFPVGSRVRVTSYGPFREHRGTVRDVHTIAVDLEEPFCFYLVALDHGQRKEPLWFDYAEVELNTSSLVALQER*
Ga0075019_108283951	3300006086	Watersheds	MSFRALPVGSRVRVTSYSPFREQWGTVRDVHTIAADLEEPFCFYLIALDSGQRKEPIWFDYNEVELITSSLVALQES*
Ga0075015_1001326793	3300006102	Watersheds	MSFRALPVGSRVRVTSYSPFREHWGTVRDVHTIAADLEEPFCFYLIALDSGQGKEPIWFDYSEVELITSSLVAIQES*
Ga0075015_1004897611	3300006102	Watersheds	MTYQVFPVGSRVRVTSYGPFREHRGTVRDVHTIEASLEEPFCFYLVALDHGQRKEPLWFDYAEVELNTSSLVALQER*
Ga0075015_1007182582	3300006102	Watersheds	MTYHILPVGSRVRVTSYGPFREHWGTVRDVHTIAPDLEEPFCFYLLALDSGQRKEPIWFEYGEVELITSSLVALQER*
Ga0075030_1004359681	3300006162	Watersheds	GTVRDVHTIAADLEEPFCFYLVALDHGQRKEPLWFDYAEVELNTSSLVALQER*
Ga0075021_108278801	3300006354	Watersheds	MSFRALPVGSRVRVTSYSPFREHWGTVRDVHTIAADLEDPFCFYLIAFDSGQRKEPIWFDYSEVELITSSLVSPGIY*
Ga0066665_100787952	3300006796	Soil	MTYHVLSVGSRVRVTSYGPFREQWGTVRDVHTIAADLEEPFCFYLIALDSGQRKEPIWFDYSEVELITSSLFALQER*
Ga0066665_103416163	3300006796	Soil	VRVTSYGPFRERWGTVCDVHTISPDLEEPFCFYLVALDSGQRKEPIWFEYSEVELITSSLVALQER*
Ga0066665_108269563	3300006796	Soil	SFRFLLVGSRVRVTSYGPFREQWGTVRDVHTIAADLEEPFCFYLIAFDSGQRKEPIWFDYSEVELITSSLVALQER*
Ga0099827_105161833	3300009090	Vadose Zone Soil	MTYHVLPVDNRVRVTSYGPFREHWGTIRDVHMIDADLEEPFCLYLIALDSGQRKEPIWFDYSEVELITSSLVALQEH*
Ga0116214_10007305	3300009520	Peatlands Soil	MTYHIFPVGSRVRVTSYGPFHEHRGTVRDVHTIAADLEEPLCFYLVALDHEQRKEPLWFDYAEVELNTSSLVALQER*
Ga0116214_10039257	3300009520	Peatlands Soil	MSFRALPVGSRVRVISYSPFREQWGTVRDVHTIAADLEEPFCFYLIALDSGQRKEPIWFDYSEVELITSSLVALQES*
Ga0116214_10135502	3300009520	Peatlands Soil	MTNHIFPVGSRVRVTSYGPFREHRGTVRDVHTIEADLEEPFCFYLVALDHGQRKEPLWFDYAEVELNTSSLVALQER*
Ga0116214_10464342	3300009520	Peatlands Soil	MTYQVLPVGSRVRVTSYGPIREHWGTVRAVHTIAPDLEEPFCFYLLALDSGQRKEPIWFEYGEVELITSSLVALQER*
Ga0116214_13867491	3300009520	Peatlands Soil	MTYHVFPVGSRVRVTSYGPFREHRGTVCDVHTIEASLEEPFCFYLVALDHGQKKEPLWFDYAEVELNTS
Ga0116222_12008032	3300009521	Peatlands Soil	MTNHIFPVGSRVRVTSYGPFREHRGTVRDVHTIEASLEEPFCFYLVALDHGQKKEPLWFDYAEVELNTSSLVALRDR*
Ga0116218_10019373	3300009522	Peatlands Soil	MTYHVFPVGSRVRVTSYGPFREHRGTVCDVHTIEASLEEPFCFYLVALDHGQKKEPLWFDYAEVELNTSSLVALRDR*
Ga0116220_100727371	3300009525	Peatlands Soil	MTYHVFPVGSRVRVTSYGPFREHRGTVRDVHTIAADLEEPFCFYLVALDHGQRKEPLWFDYAEVELNTSSLVALQER*
Ga0116217_100847233	3300009700	Peatlands Soil	MTNHIFPVGSRVRVTSYGPFREHRGTVRDVHTIEAALEEPFCFYLVALDHGQRKEPLWFDYAEV
Ga0116217_102226002	3300009700	Peatlands Soil	RVTSYGPFREHWGTVRDVHTIAPDLEEPFCFYLLALDSGQRKEPIWFEYGEVELITSSLVALQER*
Ga0116219_104865931	3300009824	Peatlands Soil	SLRRSSYSMTNHIFPVGSRVRVTSYGPFREHRGTVRDVHTIAADLEEPLCFYLVALDHEQRKEPLWFDYAEVELNTSSLVALQER*
Ga0134062_105429001	3300010337	Grasslands Soil	MTDHVLPVGSRVRVTSYGPFRERWGTVCDVHTISPDLEEPFCFYLVALDSGQRKEPIWFDYSEVELITSSLVALQER*
Ga0136449_1000871651	3300010379	Peatlands Soil	DVHTIEASLEEPFCFYLVALDHGQKKEPLWFDYAEVELNTSSLVALRDR*
Ga0136449_1001507491	3300010379	Peatlands Soil	MTYHVFPVGSRVRVTSYGPFREHRGTVCDVHTIEASLEEPFCFYLVALDHGQKKEPLWFDYAEVELNT
Ga0136449_1008803352	3300010379	Peatlands Soil	MTNHIFPVGSRVRVTSYGPFREHRGTVRDVHTIAADLEEPFCFYLVALDHGQRKEPLWFDYAEVELN
Ga0136449_1019249521	3300010379	Peatlands Soil	VRVTSYGPVREHRGTIRDVHTIAADLEEPFCFYLITLDSGQRKEPIWFEYDEVELITSSLVALQEL*
Ga0138573_11533111	3300011089	Peatlands Soil	MTNHIFPVGSRVRVTSYGPFREHRGTVRDVHTIEADLEEPFCFYLVALDHGQRKEPLWFDYAEVELNTSSLVALRDR*
Ga0137364_104754051	3300012198	Vadose Zone Soil	MSFRFLLVGSRVRVTSYGPFREQWGTVRDVHTIAADLEEPFCFYLIAFDSGQRKEPIWFDYSEVELITSSLVALQER*
Ga0137382_106157431	3300012200	Vadose Zone Soil	MSFRFLPVGSRVRVTSYGPFREQWGTVRDVHTIAADLEEPFCFYLIAFDSGQRKEPIWFDYSEVELITSSLVALQER*
Ga0137365_100184685	3300012201	Vadose Zone Soil	MTDHVLPVGSRVRVTCYGPFREQWGMVRDVHMISADLEEPFCFYLIALDSGQRKEPIWFDYSEVELITSSLFALQER*
Ga0137365_106212491	3300012201	Vadose Zone Soil	WGTVRDVHMIDAALEEPFCFYLIALDSGQRKEPIWFDFSEVELITSSLVALQEH*
Ga0137365_108916861	3300012201	Vadose Zone Soil	MIYHVLPPGSRVRVTSYGPFREHWGTVRDVHMIDAALEEPFCFYLIALDSGQRKEPIWFDFSEV
Ga0137365_113195031	3300012201	Vadose Zone Soil	MTDHVLPVGSRVRVTSYGPFREQWGTVRDVHMIDAALEEPFCFYLIALDSGQRKEPIWFDFSEV
Ga0137376_112434691	3300012208	Vadose Zone Soil	MSFRFLLVGSRVRVTSYGPFREQWGTVRDVHTIAADLEEPFCFYLIAFDSGQRKEPIWFDYSEVELITS
Ga0137379_102597133	3300012209	Vadose Zone Soil	HSMIYHVLPLGSRVRVISYGPFREHWGTVLDVHMIDADLEEPFCFYLIALDSGQRKEPIWFDYTEIELITSSLVALQES*
Ga0137379_112628961	3300012209	Vadose Zone Soil	MIYHVLPLGSRVRVISYGPFREHWGTVLDVHMIDADLEKPFCFYLIALDSGQRKEPIWFDYSEVELITSSLVALQEH*
Ga0137379_115943832	3300012209	Vadose Zone Soil	VLPVGSRVRVTSYGPFRERWGTVCDVHTISPDLEEPFCFYLVALDSGQRKEPIWFEYSEVELITSSLVALQER*
Ga0137372_103466581	3300012350	Vadose Zone Soil	MTYHVLPPGSRVRVTSYGPFREHWGTVRDVHMIDAALEEPFCFYLIALDSGQRKEPIWFDFSEVELITSSLVALQEH*
Ga0137386_105266861	3300012351	Vadose Zone Soil	MIYHVLPLGSRVRVISYGPFREHWGTVLDVHMIDADLEKPFCFYLIALDSGQRKEPIWFDYSEVEL
Ga0137366_104651001	3300012354	Vadose Zone Soil	MTYHVLPPGSRVRVTSYGPFREHWGTVLDVHMIDADLEEPFCFYLIALDSGQRKEPIWFDFSEVELITSSLVALQEH*
Ga0137385_102386081	3300012359	Vadose Zone Soil	MTYHVLPPGSRVRVTSYGPFREHWGTVRDVHMIDAALEEPFCFYLIALDSGQRKEPIWFDFSEVELITSSLVALQEH
Ga0137385_103525071	3300012359	Vadose Zone Soil	MTDHVLPVGSRVRVTSYGPFRERWGTVCDVHTISPDLEEPFCFYLVALDSGQRKEPIWFEYSEV
Ga0137360_105599643	3300012361	Vadose Zone Soil	MNVLPRDSLVRVTSYSPFRGLEGTIRSVHTISPDLDEPFCYYLIALDGAQTKEPIWFEHNEVALIASPLVALQASK*
Ga0126369_101536944	3300012971	Tropical Forest Soil	VRVTSYGPFREQWGTVSAVHTIDADLEEPFCFYLITFDNGQIKEPIWFDYSEVEPITSSLFALQET*
Ga0134087_103580741	3300012977	Grasslands Soil	MSFRFLLVGSRVRVTSYGSFREQWGTVRDVHTIAADLEEPFCFYLIAFDSGQRKEPIWFDYSEVELITSSLVALQER*
Ga0182032_114594592	3300016357	Soil	YGPFREHWGTVRDVHTIAADLEEPFCFYLVALDSRQRKEPIWFEYSEVELITSTLFAFQE
Ga0187812_10097556	3300017821	Freshwater Sediment	MSFRALPVGSRVRVTSYSPFREQWGTVRDVHTIAADLEEPFCFYLIALDSGQRKEPIWFDYSEVELITSSLVALQES
Ga0187812_11138401	3300017821	Freshwater Sediment	MTYQVLPEGSRVRVTSYGPFHEHRGTVRDVHTIEASLEEPFCFYLVALDHGQRKEPLWFDYAEVELNTSLLVALQER
Ga0187814_102197951	3300017932	Freshwater Sediment	MTYHIFPVGSRVRVTSYGPFREHRGTVRDVHTIAADLEGPFCFYLVALDNGQRKEPIWFDYAEVELNTSSLVALQER
Ga0187814_103120031	3300017932	Freshwater Sediment	MTYHIFPVGSRVRVTSYGPFREHRGTVRDVHTIAADLEEPFCFYLVALDHGQRNEPLWFDYAEVELNTSSLVALQER
Ga0187808_104593111	3300017942	Freshwater Sediment	MTYQVFPVGSRVRVTSYGPFREHRGTVRDVHTIEAFLEEPFCFYLVALDHGQRKEPLWFDYAEVELNTSSLVALQEH
Ga0187819_107193882	3300017943	Freshwater Sediment	VRVTSYSPFREQWGTVRDVHTIAADLEEPFCFYLIALDSGQRKEPIWFDYSEVELITSSLVALQES
Ga0187817_100268574	3300017955	Freshwater Sediment	MSFHALPVGSRVRVTSYSPFREQWGTVRDVHTIAADLEEPFCFYLIALDSGQRKEPIWFDYSEVELITSSLVALQES
Ga0187817_110598021	3300017955	Freshwater Sediment	MTYQVLPIGSRVRVTSYGPFREHWGTVRDVHTIEASLEEPFCFYFIALDNGHRKEPIWFEYDEVELITSSLVALQER
Ga0187779_101462561	3300017959	Tropical Peatland	MTYRVLPVGSRVRVTSYSPFREQWGTIRDVHTIMADHEEPFCYYLIELDSSQKKEPLWFDYSEVELITSSLISLEAY
Ga0187779_105685391	3300017959	Tropical Peatland	MTYHVLPVGSRVRVTSYGPFREHWGTVRDVHTIAADLEEPFCFYLIAFDNGQRNEPIWFEYSEVELITSSLVPLEAY
Ga0187776_100066951	3300017966	Tropical Peatland	FREHWGTIRDVHTIMADLEEPFCYYLIELDSSQKKEPLWFDYSEVELITSSLISLEAY
Ga0187776_111591951	3300017966	Tropical Peatland	MSFHALPVGSRVRVTSYGPFREQWGTVRDVHTIAADLEEPFCYYLIALDSGQRKEPIWFDYSEVELITSSLLALQEH
Ga0187815_103758481	3300018001	Freshwater Sediment	VRVTSYGPFHEHRGTVRDVHTIEASLEEPFCFYLVALDHGQRKEPLWFDYAEVELNTSLLVALQER
Ga0066655_104584652	3300018431	Grasslands Soil	MSFRFLLVGSRVRVTSYGPFREQWGTVRDVHTIAADLEEPFCFYLIAFDSGQRKEPIWFDYSEVELITSSLVALQER
Ga0066667_101203252	3300018433	Grasslands Soil	MSFRFLPVGSRVRVTSYGPFREQWGTVRDVHTIAADLEEPFCIYLIAFDSGQRKEPIWFDYSEVELITSSLVALQER
Ga0066662_120633681	3300018468	Grasslands Soil	KFLVEGVLHSMIYHVLPLGSRVRVISYGPFREHWGTVLDVHMIDADLEEPFCFYLIALDSGQRKEPIWFDYTEIELITSSLVALQES
Ga0066669_106164171	3300018482	Grasslands Soil	MSFRFLLVGSRARVTSYVPFREQWGTVRDVHTIAADLEEPFCFYLIAFDSGQRKEPIWFDYSEVELITSSLVALQER
Ga0210399_104297212	3300020581	Soil	VTSYGPFREQWGTVLDVHTIVADLEEPFCYYLIAFDRGQRKEPIWFDYSEVELITSSLVALQES
Ga0210402_102055681	3300021478	Soil	MTHGVLPVGSRVRVTSYGPFREQWGTVLDVHTIVADLEEPFCYYLIAFDRGQRKEPIWFDYSEVELITSSLVALQES
Ga0210409_103621661	3300021559	Soil	QVTSYGPFREQWGTVRDVHTIAADLEEPFCYYLIALDSGQRKEPIWFDYSEVELITSSPFALQES
Ga0126371_121266491	3300021560	Tropical Forest Soil	MTHHTLPVGSRVRVTSYGPFREQWGTVSAVHTIDADLEEPFCFYLITFDNGQIKEPIWFDYSEVEPITSSLFALQET
Ga0126371_135699132	3300021560	Tropical Forest Soil	MVYRVLPVDSRVRVTSYGPFREQWGTIREVHTIAADLEELFCYYLIALDGSQKKEPIWFDYSEVELITSSLVSLET
Ga0209056_100098613	3300026538	Soil	MTYHVLSVGSRVRVTSYGPFREQWGTVRDVHTIAADLEEPFCFYLIALDSGQRKEPIWFDYSEVELITSSLFALQER
Ga0209056_106844401	3300026538	Soil	MTDHVLPVGSRVRVTSYGPFRERWGTVCDVHTISPDLEEPFCFYLVALDSGQRKEPIWFEYSEVELITSSLVALQER
Ga0209474_103232482	3300026550	Soil	GTVRDVHTIAADLEEPFCFYLIAFDSGQRKEPIWFDYSEVELITSSLVALQER
Ga0208199_10127924	3300027497	Peatlands Soil	MTYHIFPVGSRVRVTSYGPFHEHRGTVRDVHTIAADLEEPLCFYLVALDHEQRKEPLWFDYAEVELNTSSL
Ga0208199_10177172	3300027497	Peatlands Soil	MSFRALPVGSRVRVISYSPFREQWGTVRDVHTIAADLEEPFCFYLIALDSGQRKEPIWFDYSEVELITSSLVALQES
Ga0208324_10033463	3300027604	Peatlands Soil	MTYHIFPVGSRVRVTSYGPFHEHRGTVRDVHTIAADLEEPLCFYLVALDHEQRKEPLWFDYAEVELNTSSLVALQER
Ga0208324_10084964	3300027604	Peatlands Soil	MTYHVFPVGSRVRVTSYGPFREHRGTVCDVHTIEASLEEPFCFYLVALDHGQRKEPLWFDYAEVELNT
Ga0208324_10644301	3300027604	Peatlands Soil	MTNHIFPVGSRVRVTSYGPFREHRGTVRDVHTIEADLEEPFCFYLVALDHGQRKEPLWFDYAEVELNTS
Ga0209068_101999481	3300027894	Watersheds	MSFRALPAGSRVRVTSYSPFREQWGTVIDVHTIAADLEEPFCFYLISLDSGQRKEPIWFDYNEIELITSSLVALQES
Ga0209048_100071608	3300027902	Freshwater Lake Sediment	MSFRALPAGSRVRVTSYGPFREQWGTVRDVHTIAADLEEPFCYYLIAFDSGQRKEPIWFDYSEVELITSSLVALQES
Ga0209048_101267452	3300027902	Freshwater Lake Sediment	MSFCALPVGSRVRVTSYSPFREQWGTVRDVHTIAADLEEPFCFYLIALDSGQRKEPIWFDYSEVELITSSLVALQER
Ga0209698_105225452	3300027911	Watersheds	MSFRALPVGSRVRVTSYSPFREQWGTVRDVHTIAADLEEPFCFYLIALDSGQGKEPIWFDYSEVEIITSSLVAIQEN
Ga0209698_107671591	3300027911	Watersheds	SRVRVTSYGPFREHRGTVRDVHTIAADLEEPFCFYLVALDHGQRKEPLWFDYAEVELNTSSLVALQER
Ga0209069_104028661	3300027915	Watersheds	MSFRALPAGSRVRVTSYSPFREQWGTVLDVHTIAADLEEPFCFYLIALDSGQRKEPIWFDYSEVELITSSLVALQER
Ga0310037_100035586	3300030494	Peatlands Soil	MTNHIFPVGSRVRVTSYGPFREHRGTVRDVHTIEADLEEPFCFYLVALDHGQRKEPLWFDYAEVELNTSSLVALQER
Ga0310037_100037446	3300030494	Peatlands Soil	MTYHVFPVGSRVRVTSYGPFREHRGTVCDVHTIEASLEEPFCFYLVALDHGQKKEPLWFDYAEVELNTSSLVALRDR
Ga0306923_117683271	3300031910	Soil	MSFCPLPVGSRVRVTSYSPFREQWGTVRDVHTIAADLEEPFCYYLIALDGGQRKEPIWFDYSEVELITSS
Ga0311301_100542757	3300032160	Peatlands Soil	MSFRVLPVGSRVRVISYSPFREQWGTVRDVHTIAADLEEPFCFYLIALDSGQRKEPIWFDYNEVELITSSLVALQES
Ga0311301_100599648	3300032160	Peatlands Soil	MTYQVLPVGSRVRVTSYGPFREHWGTVRDVHTIAPDLEEPFCFYLLALDSGQRKEPIWFEYGEVELITSSLVALQER
Ga0311301_112872202	3300032160	Peatlands Soil	MSFHVLPVGSRVRVTSYSPFREQWGTVRDVHTIAADLEEPFCFYLIALDSGQRKEPIWFDYSEVELITSSLVVLQ
Ga0335085_105160001	3300032770	Soil	MTYRVLPVGSRVRVTSYGPFREQWGTVRDVHTIMADLEEPFCYYLIELDSSQKKEPLWFDYNEVELITSSLISLEAY
Ga0335081_106358943	3300032892	Soil	MTYRVLPVGSRVRVTSYGPFREQWGTVRDVHTIMADLEEPFCYYLIELDSSQKKEPLWFDYSEVELITSSLISLEAY
Ga0310914_109948651	3300033289	Soil	MSFCPLPVGSRVRVTSYSPFREQWGTVRDVHTIAADLEEPFCYYLIALDGGQRKEPIWFDYSEVELITSSLFALQER
Ga0314865_139701_288_521	3300033806	Peatland	MTYRVLPEGSRVRVTSYGPFREQWGTIRDVHTIMADLEEPFCYYLIELDSSQKKEPLWFDYSEVELITSSLISLEAY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084317

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences