Metagenome / Metatranscriptome Family F084294

Basic Information
Family ID	F084294
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	116 residues
Representative Sequence	MSTATKSRPVKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS
Number of Associated Samples	97
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.32 %
% of genes near scaffold ends (potentially truncated)	41.07 %
% of genes from short scaffolds (< 2000 bps)	83.04 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (99.107 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.607 % of family members)
Environment Ontology (ENVO)	Unclassified (31.250 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (38.393 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.02% β-sheet: 5.88% Coil/Unstructured: 52.10%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF04545	Sigma70_r4	40.18
PF00437	T2SSE	9.82
PF03320	FBPase_glpX	2.68
PF12327	FtsZ_C	1.79
PF01638	HxlR	1.79
PF13489	Methyltransf_23	1.79
PF08241	Methyltransf_11	0.89
PF05187	ETF_QO	0.89
PF09210	BE_C	0.89
PF02777	Sod_Fe_C	0.89
PF10041	DUF2277	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1494	Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase or related protein	Carbohydrate transport and metabolism [G]	2.68
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.79
COG0605	Superoxide dismutase	Inorganic ion transport and metabolism [P]	0.89
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.89
COG1543	Predicted glycosyl hydrolase, contains GH57 and DUF1957 domains	Carbohydrate transport and metabolism [G]	0.89
COG2440	Ferredoxin-like protein FixX	Energy production and conversion [C]	0.89

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.11 %
Viruses	superkingdom	All Organisms → Viruses	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.11 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	91.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	91.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	15.18 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	8.93 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	3.57 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2.68 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	0.89 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2.68 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.89 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	0.89 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001991\|JGI24743J22301_10141861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300004000\|Ga0055458_10080646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	867	Open in IMG/M
3300004012\|Ga0055464_10082929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	873	Open in IMG/M
3300004114\|Ga0062593_102579541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	577	Open in IMG/M
3300004146\|Ga0055495_10182882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	545	Open in IMG/M
3300004156\|Ga0062589_100660414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	920	Open in IMG/M
3300004157\|Ga0062590_102865830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300004800\|Ga0058861_11987964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	791	Open in IMG/M
3300005093\|Ga0062594_101342735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	721	Open in IMG/M
3300005329\|Ga0070683_100331627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1448	Open in IMG/M
3300005331\|Ga0070670_100607790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	979	Open in IMG/M
3300005337\|Ga0070682_100794573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	768	Open in IMG/M
3300005355\|Ga0070671_102005107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515	Open in IMG/M
3300005440\|Ga0070705_101794111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	520	Open in IMG/M
3300005455\|Ga0070663_101492891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	601	Open in IMG/M
3300005530\|Ga0070679_100506896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1151	Open in IMG/M
3300005578\|Ga0068854_101382761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	636	Open in IMG/M
3300005618\|Ga0068864_100801536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	926	Open in IMG/M
3300006038\|Ga0075365_10261642	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300006038\|Ga0075365_11089030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300006042\|Ga0075368_10247685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	761	Open in IMG/M
3300006048\|Ga0075363_100036724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2571	Open in IMG/M
3300006048\|Ga0075363_100620448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300006051\|Ga0075364_11161290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300006358\|Ga0068871_100648538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	964	Open in IMG/M
3300009098\|Ga0105245_12414791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300009176\|Ga0105242_10580419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1079	Open in IMG/M
3300009868\|Ga0130016_10030531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	6606	Open in IMG/M
3300009868\|Ga0130016_10047510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4586	Open in IMG/M
3300009868\|Ga0130016_10731327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	598	Open in IMG/M
3300009868\|Ga0130016_10856618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300009870\|Ga0131092_10000467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	104142	Open in IMG/M
3300009870\|Ga0131092_10101523	All Organisms → cellular organisms → Bacteria	3390	Open in IMG/M
3300009870\|Ga0131092_10361524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1374	Open in IMG/M
3300009873\|Ga0131077_10002876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	49636	Open in IMG/M
3300009873\|Ga0131077_10005016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	30094	Open in IMG/M
3300009873\|Ga0131077_10556054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1049	Open in IMG/M
3300010051\|Ga0133939_1001406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	338256	Open in IMG/M
3300010051\|Ga0133939_1004109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	154783	Open in IMG/M
3300010403\|Ga0134123_11017510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	845	Open in IMG/M
3300011332\|Ga0126317_10957424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	686	Open in IMG/M
3300012188\|Ga0136618_10216772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	830	Open in IMG/M
3300012527\|Ga0136633_1000488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	30636	Open in IMG/M
3300012530\|Ga0136635_10019706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1990	Open in IMG/M
3300012678\|Ga0136615_10053996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2015	Open in IMG/M
3300012681\|Ga0136613_10281665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	924	Open in IMG/M
3300012915\|Ga0157302_10399997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	566	Open in IMG/M
3300012943\|Ga0164241_10249127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1270	Open in IMG/M
3300012943\|Ga0164241_10674973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	749	Open in IMG/M
3300012943\|Ga0164241_10847734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	667	Open in IMG/M
3300013296\|Ga0157374_11036118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	840	Open in IMG/M
3300013308\|Ga0157375_10605537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1254	Open in IMG/M
3300014260\|Ga0075307_1092085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	624	Open in IMG/M
3300014272\|Ga0075327_1062461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1107	Open in IMG/M
3300014295\|Ga0075305_1054187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	745	Open in IMG/M
3300014304\|Ga0075340_1104276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	574	Open in IMG/M
3300014317\|Ga0075343_1065657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	765	Open in IMG/M
3300014325\|Ga0163163_10320130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1605	Open in IMG/M
3300014326\|Ga0157380_12574726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	575	Open in IMG/M
3300014968\|Ga0157379_10664984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	976	Open in IMG/M
3300014969\|Ga0157376_12004855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	616	Open in IMG/M
3300017695\|Ga0180121_10014163	All Organisms → cellular organisms → Bacteria	2853	Open in IMG/M
3300017787\|Ga0183260_10041551	All Organisms → cellular organisms → Bacteria	3440	Open in IMG/M
3300017789\|Ga0136617_10042272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4047	Open in IMG/M
3300017789\|Ga0136617_10338500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1228	Open in IMG/M
3300017792\|Ga0163161_10436798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1056	Open in IMG/M
3300018422\|Ga0190265_11098314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	916	Open in IMG/M
3300018432\|Ga0190275_10000714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	27048	Open in IMG/M
3300018469\|Ga0190270_10542128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1120	Open in IMG/M
3300018476\|Ga0190274_10660623	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300018476\|Ga0190274_13611811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300018481\|Ga0190271_10262111	All Organisms → cellular organisms → Bacteria	1768	Open in IMG/M
3300020080\|Ga0206350_11051397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	851	Open in IMG/M
3300020181\|Ga0196958_10160434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	781	Open in IMG/M
3300022171\|Ga0213857_1026882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	652	Open in IMG/M
3300022893\|Ga0247787_1038354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	686	Open in IMG/M
3300025573\|Ga0210133_1145868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	527	Open in IMG/M
3300025908\|Ga0207643_11137150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	503	Open in IMG/M
3300025917\|Ga0207660_10593299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	902	Open in IMG/M
3300025925\|Ga0207650_10647631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	890	Open in IMG/M
3300025934\|Ga0207686_11182392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	626	Open in IMG/M
3300025938\|Ga0207704_10078362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2125	Open in IMG/M
3300025944\|Ga0207661_10047122	All Organisms → cellular organisms → Bacteria	3420	Open in IMG/M
3300025961\|Ga0207712_10995466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	744	Open in IMG/M
3300026030\|Ga0208908_1023623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	579	Open in IMG/M
3300026095\|Ga0207676_10496781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1158	Open in IMG/M
3300026111\|Ga0208291_1026554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1062	Open in IMG/M
3300026118\|Ga0207675_100445470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1282	Open in IMG/M
3300027638\|Ga0208612_1157755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300027870\|Ga0209023_10012543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	7886	Open in IMG/M
3300028590\|Ga0247823_11059819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	608	Open in IMG/M
3300028592\|Ga0247822_10977990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	698	Open in IMG/M
3300028596\|Ga0247821_10953246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	573	Open in IMG/M
3300028597\|Ga0247820_10859960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	641	Open in IMG/M
3300028802\|Ga0307503_10351473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	756	Open in IMG/M
3300028812\|Ga0247825_11239244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	545	Open in IMG/M
3300030336\|Ga0247826_11445894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300031091\|Ga0308201_10167977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	701	Open in IMG/M
3300031450\|Ga0272433_10000016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	371239	Open in IMG/M
3300031548\|Ga0307408_100264507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1425	Open in IMG/M
3300031691\|Ga0316579_10174911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1038	Open in IMG/M
3300031728\|Ga0316578_10857541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300031728\|Ga0316578_10902002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	510	Open in IMG/M
3300031938\|Ga0308175_101206468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	841	Open in IMG/M
3300031949\|Ga0214473_11210674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	781	Open in IMG/M
3300031965\|Ga0326597_10850625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	940	Open in IMG/M
3300031996\|Ga0308176_10890887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	934	Open in IMG/M
3300032156\|Ga0315295_12160077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
3300033407\|Ga0214472_11211333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	658	Open in IMG/M
3300033541\|Ga0316596_1019320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1728	Open in IMG/M
3300034652\|Ga0316598_017339	All Organisms → Viruses → Predicted Viral	1808	Open in IMG/M
3300034653\|Ga0316599_096533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	770	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.04%
Host-Associated	Host-Associated	31.25%
Engineered	Engineered	10.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	41.96%
Plants	Host-Associated → Plants	30.36%
Aquatic	Environmental → Aquatic	16.07%
Wastewater	Engineered → Wastewater	10.71%
Human	Host-Associated → Human	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.07%
Freshwater	Environmental → Aquatic → Freshwater	12.50%
Activated Sludge	Engineered → Wastewater → Activated Sludge	8.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.14%
Roots	Host-Associated → Plants → Roots	7.14%
Marine	Environmental → Aquatic → Marine	3.57%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	1.79%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.89%
Digestive System	Host-Associated → Human → Digestive System	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.50%
Ice	Environmental → Aquatic → Freshwater → Ice	8.93%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	8.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.04%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.14%
Loam	Environmental → Terrestrial → Soil → Loam	5.36%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	5.36%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.57%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.79%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	1.79%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.89%
Lake	Environmental → Aquatic → Freshwater → Lake	0.89%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.89%
Sand	Environmental → Terrestrial → Soil → Sand	0.89%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.89%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.50%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	8.93%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	8.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.04%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.36%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	5.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.46%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.57%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.79%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.89%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.89%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.89%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.89%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.89%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.61%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	8.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.14%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	6.25%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	6.25%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	5.36%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.46%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.68%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.79%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.79%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Industrial Wastewater	1.79%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.89%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	0.89%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.89%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.89%
Polar Desert	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.89%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.89%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001991	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2	Host-Associated	Open in IMG/M
3300004000	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D2	Environmental	Open in IMG/M
3300004012	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004146	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleB_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009868	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant	Engineered	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300009873	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant	Engineered	Open in IMG/M
3300010051	Industrial wastewater microbial communities from reactors of effluent treatment plant in South Killingholme, Immingham, England. Combined Assembly of Gp0151195, Gp0151196	Engineered	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012188	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ330 (21.06)	Environmental	Open in IMG/M
3300012527	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012678	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06)	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014260	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1_rd	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014295	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D1	Environmental	Open in IMG/M
3300014304	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqA_D1	Environmental	Open in IMG/M
3300014317	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020181	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10	Environmental	Open in IMG/M
3300022171	Metatranscriptome of freshwater sediment microbial communities from pre-fracked creek in Pennsylvania, United States - G-2016_45 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4	Environmental	Open in IMG/M
3300025573	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026030	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqA_D1_rd (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026111	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1 (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027638	Polar desert microbial communities from Antarctic Dry Valleys - UQ889 (SPAdes)	Environmental	Open in IMG/M
3300027870	Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)	Environmental	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031450	Rock endolithic microbial communities from Victoria Land, Antarctica - University Valley sud	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031691	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA	Host-Associated	Open in IMG/M
3300031728	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033541	Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300034652	Metatranscriptome of peat soil microbial communities from wetland fen in Alaska, United States - Frozen_pond_02R_16 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034653	Metatranscriptome of peat soil microbial communities from wetland fen in Alaska, United States - Frozen_pond_03R_16 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24743J22301_101418611	3300001991	Corn, Switchgrass And Miscanthus Rhizosphere	RPAKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS*
Ga0055458_100806461	3300004000	Natural And Restored Wetlands	MSTATKTRPANSDVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGNRVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKGRRPE
Ga0055464_100829291	3300004012	Natural And Restored Wetlands	SRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGNRVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKGRRPE*
Ga0062593_1025795411	3300004114	Soil	MTTATKTRPAKSDVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGDRVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRT*
Ga0055495_101828821	3300004146	Natural And Restored Wetlands	MSTATKTRPTKSDIVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEQAGGDRVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGA
Ga0062589_1006604141	3300004156	Soil	MSTAIKSRPVKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS*
Ga0062590_1028658301	3300004157	Soil	PPVGSAPRDERSKNRMSTAIKSRPAKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS*
Ga0058861_119879642	3300004800	Host-Associated	MSTAIKSRPAKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIA
Ga0062594_1013427351	3300005093	Soil	MSTAIKSRPAKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS*
Ga0070683_1003316272	3300005329	Corn Rhizosphere	MSTATKPMPVKGEVKEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS*
Ga0070670_1006077901	3300005331	Switchgrass Rhizosphere	KSRPAKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS*
Ga0070682_1007945731	3300005337	Corn Rhizosphere	MSTATKTRPTKSDVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGQSVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS*
Ga0070671_1020051071	3300005355	Switchgrass Rhizosphere	SDVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGDRVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRT*
Ga0070705_1017941111	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	AKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS*
Ga0070663_1014928911	3300005455	Corn Rhizosphere	RDERSKNRMSTAIKSRPAKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS*
Ga0070679_1005068961	3300005530	Corn Rhizosphere	MSTATKPMPVKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAAR
Ga0068854_1013827611	3300005578	Corn Rhizosphere	MSTATKTRPTKSDVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGQSVSTADRAKLRSAAVVVFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS*
Ga0068864_1008015362	3300005618	Switchgrass Rhizosphere	MSTATKPMPVKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS*
Ga0075365_102616422	3300006038	Populus Endosphere	MRRDDGGIEVMSTATKTRSNVKEFTCARCEVHSRWTEGLGASTPPNWEKVNGLYYCLVCRRERAIDAAIERAGDVSTADRAKLRSSAVVDFELARDPDRTEGEIAKAARASIGAVRKARKRQPV*
Ga0075365_110890302	3300006038	Populus Endosphere	MSTATKEKVKVKEFTCARCEVVSRWTEGLGAATPPNWVKQNGLYYCLVCRRERAVDDAIAAAGDVSTADRAKLRSSAVVDFEIARDPNRTEGEIAKAAR
Ga0075368_102476852	3300006042	Populus Endosphere	MSTATKTRSNVKEFTCARCEVHSRWTEGLGASTPPNWDKVNGLYYCLVCRRERAIDAAIERAGDVSTADRAKLRSSAVVDFELARDPDRTEGEIAKAARASIGAVRKARKRQPV*
Ga0075363_1000367241	3300006048	Populus Endosphere	TKTRSNVKEFTCARCEVHSRWTEGLGAATPPNWVKENGLYYCLVCRRERAIDEAIAKAGDVSTADRAKLRSSAVVDFELERDPDRTEGEIAKAARASIGAVRKARKRRPE*
Ga0075363_1006204481	3300006048	Populus Endosphere	VTTATKSRSKPKVKEFTCARCEVVSRWTEGLGASTPPNWDKVNGLYYCLVCRRERAIDAAIERAGDVSTADRAKLRSAAVVDFELARDPDRTEGEIAKAARASIGAVRKARKRPPV*
Ga0075364_111612901	3300006051	Populus Endosphere	VSTATATKKSKAKVKEFTCARCEVVSRWTEGLGAATPPNWDKVNGLYYCLVCRRERAIDAAIERAGDISTADRAKIRSAAVVDFELARDPDRTEGEIAKAARASIGAVRKARKRRPV*
Ga0068871_1006485382	3300006358	Miscanthus Rhizosphere	MSTATKSRPVKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS*
Ga0105245_124147911	3300009098	Miscanthus Rhizosphere	TKTRPTKSDVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEEAGGQSVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS*
Ga0105242_105804191	3300009176	Miscanthus Rhizosphere	KPMPVKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS*
Ga0130016_100305318	3300009868	Wastewater	MSTATKSRPVKGEIKEFTCARCEVTSRWTEGLGAATPPSWTKEKGLYYCLVCRRERAMEKAVEMAGGDKVSTAERAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARRRPT*
Ga0130016_100475102	3300009868	Wastewater	MSTATKSRPTKGEVKEFTCARCEVTSRWTEGLGAATPPNWTKEKGLYYCLVCRRERAMEQAVERAGGAKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARRRRPA*
Ga0130016_107313271	3300009868	Wastewater	ATKEQPKVEIKEFTCARCEVTSRWTEGLGAATPPNWVKENGLYYCLVCRRERAIDDAIAKAGDVSTADRAKLRSSAVVDFEIARDPNRTEGEIAKAARASIGAVRKARKRRPS*
Ga0130016_108566181	3300009868	Wastewater	FTCARCEVTSRWTEGLGAATPPSWTKEKGLYYCLVCRRERAMEKAVEQAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARRRRPE*
Ga0131092_1000046728	3300009870	Activated Sludge	MSTATKSMPIKGEIKEFTCARCEVTSRWTEGLGAATPPSWTKEKGLYYCLVCRRERAMEKAVERAGGDKVSTAERAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARRRPT*
Ga0131092_101015233	3300009870	Activated Sludge	MSTATKEKVEVKEFTCARCEVTSRWTEGLGASTPPNWVKENGLYYCLVCRRERAVDDAIAAAGDVSTADRAKLRSSAVVDFEIARDPNRTEGEIAKAARASIGAVRKARKRRPS*
Ga0131092_103615242	3300009870	Activated Sludge	MSTATKPRPVKGEIKEFTCARCEVTSRWTEGLGAATPPSWTKEKGLYYCLVCRRERAMEEAVEKAGGDKVSTAERAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARRRRPA*
Ga0131077_1000287632	3300009873	Wastewater	MSTATKSRPVKGEIKEFTCARCEVTSRWTEGLGAATPPSWTKEKGLYYCLVCRRERAMEKAVEMAGGDKVSTAERAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARRRRPQ*
Ga0131077_1000501611	3300009873	Wastewater	MSTATKTRVAKKSEPVQFTCARCEVTSLWTQGLGAATPPNWVKEKGLYYCLACRRERAMEQAVEKAGGERVSTADRAKLRSAAVVDFELARDPDRTEGEIAKAARASIGAVRKARKRRPS
Ga0131077_105560542	3300009873	Wastewater	MSTATKEQPKIKVKEFTCARCEVTSRWTEGLGAATPPNWVKENGLYYCLVCRRERAIDDAIAKAGDVSTADRAKLRSSAVVDFEIARDPNRTEGEIAKAARASIGAVRKARKRRPS*
Ga0133939_1001406108	3300010051	Industrial Wastewater	MTTATKTRSARKGAPVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLACRRERAMEQAVEKAGGDSVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARRGRRPE*
Ga0133939_1004109107	3300010051	Industrial Wastewater	MSTATKTRTKSTEPVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGRKVSTAERAKLRSAAIVDFEIARDPDRTEGEIAKAARASIGAVRKARRTRRPS
Ga0134123_110175102	3300010403	Terrestrial Soil	MSTAIKSRPAKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEG
Ga0126317_109574242	3300011332	Soil	MSTATKTRTSDSSAVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGNKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIG
Ga0136618_102167722	3300012188	Polar Desert Sand	MEASMSTATATATKTRPKVKEFTCGRCRVHSTWTEGLGASTPPNWVKEDGQFFCLVCRRERAIDAAIERAGDVSTADRAKLRSAAVVDFELWRNPDRTEGEIAKAARASIGAVRKARKRRPV*
Ga0136633_100048817	3300012527	Polar Desert Sand	MSSATKTAPVEFTCVRCEVTSRWAEGLGAAVPPNWVRVNGLHYCLVCRRERAIEAAIELAGDVSTADRAKLRTSAVVEFELDRNPDRTEGEIAKAARASIGAVRKARGNRRPG*
Ga0136635_100197063	3300012530	Polar Desert Sand	MSTATASPTKTRSKVKEFTCARCEVHSRWTEGLGAATPPNWVRVEGLYYCLVCRRERAIDAAIERAGDVSTADRAKLRSSAVVDFELERDPDRTEGEIAKAARASIGAVRKARKRRPV*
Ga0136615_100539962	3300012678	Polar Desert Sand	MATATKTTKTKEWRCARCRMTSRWTEGLGASAPPNWIRADGLYYCLVCRRERAIEAAIEKAGPEISTADRAKLRSSAVVDFELERNPDRTEGEIAKAARASISAVRKARKRRPS*
Ga0136613_102816651	3300012681	Polar Desert Sand	MTSRWTEGLGASAPPNWIRADGLYYCLVCRRERAIEAAIEKAGPEISTADRAKLRSSAVVDFELERNPDRTEGEIAKAARASISAVRKARKRRPS*
Ga0157302_103999971	3300012915	Soil	STATKSRPVKGEVKEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS*
Ga0164241_102491272	3300012943	Soil	MSTATKTRPADSNAVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEQAGGQEVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPE
Ga0164241_106749732	3300012943	Soil	MSTATKTRTSDSSAVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGKEVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS
Ga0164241_108477342	3300012943	Soil	MSTATKTRPADSNAVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEQAGGQSVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPE
Ga0157374_110361181	3300013296	Miscanthus Rhizosphere	MSTAIKSRPAKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVGTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKR
Ga0157375_106055372	3300013308	Miscanthus Rhizosphere	MSNSIKSRPAKGEVKEVTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDRVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS*
Ga0075307_10920851	3300014260	Natural And Restored Wetlands	KTRPAKSDVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGNRVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKGRRPE*
Ga0075327_10624612	3300014272	Natural And Restored Wetlands	MSTATKSRPTKSDVVEFTCARCEVRSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGDRISTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRR*
Ga0075305_10541872	3300014295	Natural And Restored Wetlands	MSTATKTRPANSDVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEQAGGDRVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS*
Ga0075340_11042761	3300014304	Natural And Restored Wetlands	MSTATKTRPTKSDVVEFTCARCEATSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEQAGGDRVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS*
Ga0075343_10656571	3300014317	Natural And Restored Wetlands	MSTATKTRTSDSSAVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEQAGGDRVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPE
Ga0163163_103201302	3300014325	Switchgrass Rhizosphere	MSTAIKSRPAKGEVKEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS*
Ga0157380_125747262	3300014326	Switchgrass Rhizosphere	MSTATKTRSNVKEFTCARCEVHSRWTEGLGASTPPNWEKVNGLYYCLVCRRERAIDAAIERAGDVSTADRAKLRSSAVVDFELARDPDRTEGEIAKAARASIGAVRKARKRQ
Ga0157379_106649841	3300014968	Switchgrass Rhizosphere	RMSTAIKSRPAKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS
Ga0157376_120048551	3300014969	Miscanthus Rhizosphere	MSTAIKSRPVKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPE*
Ga0180121_100141633	3300017695	Polar Desert Sand	MSTATASPTKTRSKVKEFTCARCEVHSRWTEGLGAATPPNWVRVEGLYYCLVCRRERAIDAAIERAGDVSTADRAKLRSSAVVDFELERDPDRTEGEIAKAARASIGAVRKARKRRPV
Ga0183260_100415514	3300017787	Polar Desert Sand	MATATKTTKTKEWRCARCRMTSRWTEGLGASAPPNWIRADGLYYCLVCRRERAIEAAIEKAGPEISTADRAKLRSSAVVDFELERNPDRTEGEIAKAARASISAVRKARKRRPS
Ga0136617_100422722	3300017789	Polar Desert Sand	MSTATKSPQVEFTCARCEVVSRWTQGLGAAAPPNWVKVNGLHYCLVCRRERAIDDAIAAAGDVSTADRAKLRSSAVVDFEIARNPNRTEGEIAKAARASIGAVRKARKRRPS
Ga0136617_103385001	3300017789	Polar Desert Sand	SQEPGIAREATMEASMSSATATKTRPKVKEFTCGRCRVHSTWTEGLGASTPPNWVKEDGQFFCLVCRRERAIDAAIERAGDVSTADRAKLRSAAVVDFELWRNPDRTEGEIAKAARASIGAVRKARKRRPV
Ga0163161_104367981	3300017792	Switchgrass Rhizosphere	MSTAIKSRPVKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS
Ga0190265_110983141	3300018422	Soil	VSTASATKSKPKVKEFTCARCEVVSRWTEGLGAATPPNWDKVNGLYYCLVCRRERAIDAAIERAGDISTADRAKIRSAAVVDFELARDPDRTEGEIAKAARASIGAVRKARKRRPV
Ga0190275_100007142	3300018432	Soil	MSTATATPTPTKPKSRKVKEFTCGRCQVHSRWTEGLGGSMPPHWVKDDGKFYCLVCRRERAIDAAILRAGDISTADRAKIRSAAVVDFELARDPDRTEGEIAKAARASIGAVRKARKRRP
Ga0190270_105421281	3300018469	Soil	RANVKEFTCARCEVHSRWTEGLGASTPPNWEKVNGLYYCLVCRRERAIDAAIERAGDVSTADRAKLRSSAVVDFELARDPDRTEGEIAKAARASIGAVRKARKRQPV
Ga0190274_106606232	3300018476	Soil	MSTATKTRTSDSNAVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGNKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPE
Ga0190274_136118111	3300018476	Soil	MEASKQMSTATKTRSNVKEFTCARCEVHSRWTEGLGASTPPNWEKVNGLYYCLVCRRERAIDAAIERAGDVSTADRAKLRSSAVVDFELARDPDRTEGEIAKAARASIGAVRKARKRQPV
Ga0190271_102621112	3300018481	Soil	MRRDDGGIEAMSTATKTRPNVKEFTCARCEVHSRWTEGLGASTPPNWEKVNGLYYCLVCRRERAIDTAIERAGDVSTADRAKLRSSAVVDFELARDPDRTEGEIAKAARASIGAVRKARKRQPV
Ga0206350_110513971	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MSTAIKSRPAKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS
Ga0196958_101604341	3300020181	Soil	MRKVKRGPSQEPPSQEPIGGNEVSTASATKSKPKVKEFTCARCEVVSRWTEGLGAATPPNWDKVNGLYYCLVCRRERAIDAAIERAGDISTADRAKIRSAAVVDFELARDPDRTEGEIAKAARASIGAVRKARK
Ga0213857_10268821	3300022171	Watersheds	MSTATKTRTSNSSAVVEFTCARCEVTSRWSEGLGAATPPHWVKEKGLYYCLVCRRERAMKQAVEKAGGNKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASI
Ga0247787_10383541	3300022893	Soil	SKNRMSTAIKSRPAKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS
Ga0210133_11458681	3300025573	Natural And Restored Wetlands	TRPANSDVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGNRVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKGRRPE
Ga0207643_111371501	3300025908	Miscanthus Rhizosphere	KSRPAKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS
Ga0207660_105932991	3300025917	Corn Rhizosphere	GRLGVRDERSKNRMSTAIKSRPAKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS
Ga0207650_106476312	3300025925	Switchgrass Rhizosphere	MTTATKTRPAKSDVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGDRVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRT
Ga0207686_111823921	3300025934	Miscanthus Rhizosphere	RPAKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS
Ga0207704_100783621	3300025938	Miscanthus Rhizosphere	MSTAIKSRPAKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAV
Ga0207661_100471221	3300025944	Corn Rhizosphere	MSTATKPMPVKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS
Ga0207712_109954661	3300025961	Switchgrass Rhizosphere	APRDERSKNRMSTAIKSRPAKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDRVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRT
Ga0208908_10236231	3300026030	Natural And Restored Wetlands	RCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGNRVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKGRRPE
Ga0207676_104967812	3300026095	Switchgrass Rhizosphere	MTTATKTRPAKSDVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS
Ga0208291_10265542	3300026111	Natural And Restored Wetlands	MSTATKSRPTKSDVVEFTCARCEVRSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGDRISTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRR
Ga0207675_1004454702	3300026118	Switchgrass Rhizosphere	AKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS
Ga0208612_11577551	3300027638	Polar Desert	MATATKTTKAKEWSCARCRMTSRWTEGLGASAPPNWIRADGLYYCLVCRRERAIEAAIEKAGPEISTADRAKLRSSAVVDFELERNPDRTEGEIAKAARASISAVRKARKRRPS
Ga0209023_100125437	3300027870	Freshwater And Sediment	MSTATKTRTSDSNAVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGKEVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPE
Ga0247823_110598192	3300028590	Soil	MTTATKTRPAKSDVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEG
Ga0247822_109779901	3300028592	Soil	MSTAIKSRPAKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAAGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS
Ga0247821_109532462	3300028596	Soil	MSTAIKSRPAKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIG
Ga0247820_108599602	3300028597	Soil	MSTAIKSRPAKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDRVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS
Ga0307503_103514732	3300028802	Soil	MSTATKTRTSDSSAVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGNKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPE
Ga0247825_112392441	3300028812	Soil	MTTATKTRPDKSDVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGDRVSTADRAKLRSAAVVDFEIARDPDRTEGEIAK
Ga0247826_114458942	3300030336	Soil	MTTATKTRPDKSDVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGDRVSTADRAKLRSAAVVDFEIARDPDRTEGE
Ga0308201_101679771	3300031091	Soil	VSTATKSKPKVKEFTCARCEVVSRWTEGLGAATPPNWDKVNGLYYCLVCRRERAIDAAIERAGDVSTADRAKLRSAAVVDFELARDPDRTEGEIAKAARASIGAVRKARKRPPV
Ga0272433_1000001665	3300031450	Rock	MATATKTTKTKEWRCARCRMTSRWTEGLGASAPPNWIRADGLYYCLVCRRERAIDAAIEKAGPEISTADRAKLRSSAVVDFELERNPDRTEGEIAKAARASISAVRKARKRRPS
Ga0307408_1002645072	3300031548	Rhizosphere	MTTATKTRPDKSDVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEKAGGDRVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRT
Ga0316579_101749112	3300031691	Rhizosphere	MSTATKSRPTKGEIKEFTCARCEVTSRWTEGLGAATPPNWIKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARRRRPA
Ga0316578_108575411	3300031728	Rhizosphere	MSTATKSRPTKSDVVEFTCARCEVTSRWTQGLGAATPPNWVKEKGLYYCLACRRERAMEQAVEKAGGDSVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS
Ga0316578_109020021	3300031728	Rhizosphere	AKNGAPTRMSTATKSRPTKGEIKEFTCARCEVTSRWTEGLGAATPPNWIKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARRRRPA
Ga0308175_1012064681	3300031938	Soil	MSTATKSRPVKGEVKEFTCARCEVTSRWTEGLGAATPPNWAREKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPS
Ga0214473_112106742	3300031949	Soil	VAEWTCARCEMTSRWTEGLEGADVPPNWVRVNGLHYCLVCRRERAIEDALEQAGPEVGMEARAKLRSSAVVEFEVDRDPDRTEGEIAKAARTSIAAVRKARKKLGA
Ga0326597_108506251	3300031965	Soil	AHITRTEVTEITTATRTEVAEWTCARCEMTSRWTEGLEGADVPPNWVRVNGLHYCLVCRRERAIETALEQAGPEVGMEARAKLRSSAVVEFEVARDPDRTEGEIAKAARTSIAAVRKARKKLGA
Ga0308176_108908871	3300031996	Soil	MSTATKSRPVKGEVKEFTCARCEVTSRWTEGLGAATPPNWAKEKGLYYCLVCRRERAMEQAVEKAGGDKVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPE
Ga0315295_121600771	3300032156	Sediment	MSTATKTRPSDSNAVVEFTCARCEVTSRWTEGLGAATPPNWVKEKGLYYCLVCRRERAMEQAVEQAGGQSVSTADRAKLRSAAVVDFEIDRDPDRTEGEIAKAARASIGAVRKARKRRPE
Ga0214472_112113332	3300033407	Soil	GGEAHITRTEVTEITTATRTEVAEWTCARCEMTSRWTEGLEGADVPPNWVRVNGLHYCLVCRRERAIEDALEQAGPEVGMEARAKLRSSAVVEFEVDRDPDRTEGEIAKAARTSIAAVRKARKKLGA
Ga0316596_10193201	3300033541	Rhizosphere	MSTATKSRPTKSDVVEFTCARCEVTSRWTQGLGAATPPNWVKEKGLYYCLACRRERAMEQAVEKAGGDSVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKA
Ga0316598_017339_1433_1795	3300034652	Untreated Peat Soil	MSTATKTRTSDSSAVVEFTCARCEVTSRWSEGLGAATPPHWVKEKGLYYCLVCRRERAMEQAVEKAGGKEVSTADRAKLRSAAVVDFEIARDPDRTEGEIAKAARASIGAVRKARKRRPE
Ga0316599_096533_468_770	3300034653	Untreated Peat Soil	MSTAIATETKTKPKGKVKEFTCARCEVTSRWPAGMGPTTPPNWVKDNGLYYCLVCRRERAVDDAIAAAGDVSTADRAKLRSAAVVDFEIARDPDRTEGEIA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084294

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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