Metagenome / Metatranscriptome Family F084285

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084285
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	109 residues
Representative Sequence	RDGKEYAEQWLEKEGFEVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKNKSGEVVGELRQKAKGSTVPDAVENGLEDMCKSIAAGK
Number of Associated Samples	102
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.88 %
% of genes near scaffold ends (potentially truncated)	88.39 %
% of genes from short scaffolds (< 2000 bps)	83.93 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.179 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (8.036 % of family members)
Environment Ontology (ENVO)	Unclassified (40.179 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.107 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.57% β-sheet: 24.60% Coil/Unstructured: 46.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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SCOP family	SCOP domain	Representative PDB	TM-score
c.51.6.2: XCC0632-like	d2iqia1	2iqi	0.77
c.51.6.2: XCC0632-like	d2iqia1	2iqi	0.77
c.51.2.1: TolB, N-terminal domain	d2hqsa2	2hqs	0.68
c.51.2.1: TolB, N-terminal domain	d2hqsa2	2hqs	0.68
c.51.4.1: ITPase-like	d1vp2a_	1vp2	0.65
c.51.2.0: TolB, N-terminal domain	d7mx5a1	7mx5	0.65
c.51.4.1: ITPase-like	d1vp2a_	1vp2	0.65
c.51.2.0: TolB, N-terminal domain	d7mx5a1	7mx5	0.65
c.51.6.1: XCC0632-like	d2i9ia1	2i9i	0.64
c.51.6.1: XCC0632-like	d2i9ia1	2i9i	0.64

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF02562	PhoH	21.43
PF07697	7TMR-HDED	5.36
PF07698	7TM-7TMR_HD	1.79
PF02913	FAD-oxidase_C	0.89
PF07650	KH_2	0.89
PF06041	DUF924	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	21.43
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	21.43
COG1480	Cyclic di-AMP-specific phosphodiesterase PgpH, HD superfamily	Signal transduction mechanisms [T]	7.14
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.89
COG3803	Uncharacterized conserved protein, DUF924 family	Function unknown [S]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.18 %
Unclassified	root	N/A	9.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.18 %
Unclassified	root	N/A	9.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.18 %
Unclassified	root	N/A	9.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	73.21 %
Unclassified	root	N/A	9.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.79 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	69.64 %
Unclassified	root	N/A	9.82 %
Thermoanaerobaculia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia	1.79 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	69.64 %
Unclassified	root	N/A	9.82 %
Thermoanaerobaculales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales	1.79 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	0.89 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	69.64 %
Unclassified	root	N/A	9.82 %
Thermoanaerobaculaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae	1.79 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.89 %
Halieaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	69.64 %
Unclassified	root	N/A	9.82 %
Thermoanaerobaculum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum	1.79 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.89 %
unclassified Halieaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → unclassified Halieaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	69.64 %
Unclassified	root	N/A	9.82 %
Thermoanaerobaculum aquaticum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	1.79 %
marine gamma proteobacterium HTCC2148	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → unclassified Halieaceae → marine gamma proteobacterium HTCC2148	0.89 %
Desulfatibacillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatibacillum	0.89 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	69.64 %
Unclassified	root	N/A	9.82 %
Thermoanaerobaculum aquaticum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	1.79 %
Desulfatibacillum alkenivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatibacillum → Desulfatibacillum alkenivorans	0.89 %
marine gamma proteobacterium HTCC2148	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → unclassified Halieaceae → marine gamma proteobacterium HTCC2148	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104562557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300002076\|JGI24749J21850_1021277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	917	Open in IMG/M
3300002239\|JGI24034J26672_10103079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300003861\|Ga0031654_10031350	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300004479\|Ga0062595_101411011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300005328\|Ga0070676_10595758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300005340\|Ga0070689_100745148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300005345\|Ga0070692_10324808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	947	Open in IMG/M
3300005356\|Ga0070674_100248895	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300005356\|Ga0070674_100812031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300005366\|Ga0070659_100094114	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	2405	Open in IMG/M
3300005445\|Ga0070708_101014335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300005455\|Ga0070663_100657970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	887	Open in IMG/M
3300005458\|Ga0070681_11860259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300005468\|Ga0070707_100224074	All Organisms → cellular organisms → Bacteria	1831	Open in IMG/M
3300005549\|Ga0070704_100552757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1006	Open in IMG/M
3300005556\|Ga0066707_10866767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → unclassified Halieaceae → marine gamma proteobacterium HTCC2148	555	Open in IMG/M
3300005577\|Ga0068857_100625488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1019	Open in IMG/M
3300005617\|Ga0068859_100893063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	973	Open in IMG/M
3300005764\|Ga0066903_100964935	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300005764\|Ga0066903_102028579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1106	Open in IMG/M
3300005836\|Ga0074470_10367331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300005841\|Ga0068863_100675271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1026	Open in IMG/M
3300005842\|Ga0068858_101177933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300005993\|Ga0080027_10322481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300006358\|Ga0068871_101205533	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	710	Open in IMG/M
3300006854\|Ga0075425_102309617	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300006904\|Ga0075424_100034052	All Organisms → cellular organisms → Bacteria → Acidobacteria	5284	Open in IMG/M
3300007076\|Ga0075435_101500046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300009088\|Ga0099830_10923065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300009089\|Ga0099828_10203443	All Organisms → cellular organisms → Bacteria	1768	Open in IMG/M
3300009089\|Ga0099828_12001184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300009100\|Ga0075418_11400628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300009162\|Ga0075423_11618809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300009792\|Ga0126374_10688879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300009809\|Ga0105089_1013824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1031	Open in IMG/M
3300010046\|Ga0126384_11415554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300010361\|Ga0126378_10148320	All Organisms → cellular organisms → Bacteria	2384	Open in IMG/M
3300010362\|Ga0126377_10069665	All Organisms → cellular organisms → Bacteria	3125	Open in IMG/M
3300010366\|Ga0126379_12924082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300010398\|Ga0126383_11247483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	833	Open in IMG/M
3300010399\|Ga0134127_13533356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300010880\|Ga0126350_11447367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300012204\|Ga0137374_10826470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300012210\|Ga0137378_11347670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300012354\|Ga0137366_10692267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300012355\|Ga0137369_10202797	All Organisms → cellular organisms → Bacteria	1532	Open in IMG/M
3300012684\|Ga0136614_10950863	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	593	Open in IMG/M
3300012955\|Ga0164298_11255000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300012958\|Ga0164299_10732541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300012971\|Ga0126369_13716406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300013306\|Ga0163162_10148602	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	2460	Open in IMG/M
3300013306\|Ga0163162_13091752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300014056\|Ga0120125_1156471	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300014325\|Ga0163163_11534784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300015075\|Ga0167636_1005971	All Organisms → cellular organisms → Bacteria	1964	Open in IMG/M
3300015193\|Ga0167668_1033963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1115	Open in IMG/M
3300015374\|Ga0132255_101039954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1229	Open in IMG/M
3300015374\|Ga0132255_105781200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300016357\|Ga0182032_10630451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300016387\|Ga0182040_11752319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300017993\|Ga0187823_10138252	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300017999\|Ga0187767_10277344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300018029\|Ga0187787_10463702	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatibacillum → Desulfatibacillum alkenivorans	513	Open in IMG/M
3300018058\|Ga0187766_10128788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1557	Open in IMG/M
3300018061\|Ga0184619_10293018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300018078\|Ga0184612_10436336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300018920\|Ga0190273_10644526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	809	Open in IMG/M
3300021344\|Ga0193719_10429943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300021478\|Ga0210402_11417067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300021560\|Ga0126371_10575104	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300025899\|Ga0207642_10389697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300025921\|Ga0207652_11832393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300025922\|Ga0207646_10365767	Not Available	1303	Open in IMG/M
3300025936\|Ga0207670_10080297	All Organisms → cellular organisms → Bacteria	2280	Open in IMG/M
3300026023\|Ga0207677_11648725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300026035\|Ga0207703_12336038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300026067\|Ga0207678_10414493	Not Available	1168	Open in IMG/M
3300026067\|Ga0207678_11267184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300026118\|Ga0207675_102399219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300026142\|Ga0207698_10358602	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300027722\|Ga0209819_10167969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300027723\|Ga0209703_1331197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300028379\|Ga0268266_10009085	All Organisms → cellular organisms → Bacteria → Acidobacteria	8776	Open in IMG/M
3300028379\|Ga0268266_10066486	All Organisms → cellular organisms → Bacteria	3118	Open in IMG/M
3300028379\|Ga0268266_10802084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300031239\|Ga0265328_10303561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300031249\|Ga0265339_10053842	All Organisms → cellular organisms → Bacteria	2187	Open in IMG/M
3300031572\|Ga0318515_10365384	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300031682\|Ga0318560_10666218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300031720\|Ga0307469_10713042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300031740\|Ga0307468_100490330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	971	Open in IMG/M
3300031765\|Ga0318554_10109363	All Organisms → cellular organisms → Bacteria	1557	Open in IMG/M
3300032008\|Ga0318562_10557214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300032013\|Ga0310906_10769145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300032076\|Ga0306924_12222800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300032205\|Ga0307472_101734302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300032782\|Ga0335082_10733901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300032783\|Ga0335079_12329067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300033004\|Ga0335084_10372573	All Organisms → cellular organisms → Bacteria	1473	Open in IMG/M
3300033158\|Ga0335077_12237849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300033432\|Ga0326729_1048624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300033557\|Ga0316617_102715946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.18%
Host-Associated	Host-Associated	34.82%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.14%
Plants	Host-Associated → Plants	34.82%
Aquatic	Environmental → Aquatic	8.04%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.18%
Freshwater	Environmental → Aquatic → Freshwater	4.46%
Sediment	Environmental → Aquatic → Sediment	3.57%
Roots	Host-Associated → Plants → Roots	1.79%
Peat	Environmental → Terrestrial → Peat	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	35.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.39%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.50%
Loam	Environmental → Terrestrial → Soil → Loam	10.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.57%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.79%
Sand	Environmental → Terrestrial → Soil → Sand	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.79%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.89%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.89%
Ice	Environmental → Aquatic → Freshwater → Ice	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.57%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.79%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.79%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.89%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.89%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.04%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.25%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.46%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.46%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.79%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.79%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.89%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.89%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.89%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.89%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.89%
Glacier Forefield Soils	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soils	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002076	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3	Host-Associated	Open in IMG/M
3300002239	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009809	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015075	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G5C, Northern proglacial tributary margin, adjacent to top of river)	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033432	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fraction	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1045625572	3300000364	Soil	EKEGFKVVKSGGDLQIEGNVFNAWEPSGAARYWGGWAANPGVGLELVCKAGGKVVGELRHKAKGSTVRDAVENGLEDMSKSISKGR*
JGI24749J21850_10212771	3300002076	Corn, Switchgrass And Miscanthus Rhizosphere	GKDYMEQWLDKQGFKVVKSGGDMTVSGNVFNAWEPHGAARYWGGWAANPGVGLELLIKANGKVVGEMRHKSKGSTIRDAVENGLEDMAKDIGRSK*
JGI24034J26672_101030791	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	DYMEQWLDKQGFKVVKSGGDMTVSGNVFNAWEPHGAARYWGGWAANPGVGLELLIKANGKVVGEMRHKSKGSTIRDAVENGLEDMAKDIGRSK*
Ga0031654_100313502	3300003861	Freshwater Lake Sediment	QKFLPDYDKLVKGKDADWVYFPDGSLKNYKTVLVHEFQNNGKGREAKEAASYGKEYMEQWMQKQGFDVVEKGPADITIEGNVFNAWEPSGAARVWGGWAANPGVGMELLIKNKSGAVVAELRQKAKGSTIHDAVENGLEDCAKSIARGK*
Ga0062595_1014110111	3300004479	Soil	DAAREGKDYMEQWLDKAGYKVVKSGGDMTVSGNVFNAWEPHGAARYWGGWAANPGVGLEVLIKANGKVVGEMRHKAKGSTIRDAVENGLEDMTKDIGKAK*
Ga0070676_105957582	3300005328	Miscanthus Rhizosphere	RDGKEYAEQWLEKEGFEVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKNKSGEVVGELRQKAKGSTVPDAVENGLEDMCKSIAAGK*
Ga0070689_1007451481	3300005340	Switchgrass Rhizosphere	EHNGKSRDSRDAARDGKEYAEQWLEKEGFEVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKNKSGEVVGELRQKAKGSTVPDAVENGLEDMCKSIAAGK*
Ga0070692_103248082	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	WVYFPKGSIKGTYKTVMVKDFEHNGKSRDSRDAARDGKEYAEQWLEKEGFEVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKNKSGEVVGELRQKAKGSTVPDAVENGLEDMCKSIAAGK*
Ga0070674_1002488951	3300005356	Miscanthus Rhizosphere	WLVKQGFKVVKSGGDMTVSGNVFNAWEPHGAARYWGGWAANPGVGLELLIKANGKVVGEMRHKSKGSTIRDAVENGLEDMAKDIGRSK*
Ga0070674_1008120311	3300005356	Miscanthus Rhizosphere	GFEVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKNKSGEVVGELRQKAKGSTVPDAVENGLEDMCKSIAAGK*
Ga0070659_1000941141	3300005366	Corn Rhizosphere	EQWLEKEGFEVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKNKSGEVVGELRQKAKGSTVPDAVENGLEDMCKSIAAGK*
Ga0070708_1010143351	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	WLEKQGFKVVKSGGDFEIEGNVFNAWEPTGAARYWGGWAANPGAGMELLCKAGGKVVCEVRHKAKGSTPRDAVENGLEDMIKAVAKGK*
Ga0070663_1006579702	3300005455	Corn Rhizosphere	RDGKDYMEQWLEKEGFKVVKSGGELQVEGNVFNAWEPSGAARYWGGWAANPGVGLELVCKAGGKVVGELRHKAKGSTVRDAVENGLEDMSKSLAKGK*
Ga0070681_118602591	3300005458	Corn Rhizosphere	DSRDAARDGKEYAEQWLEKEGFEVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKNKSGEVVGELRQKAKGSTVPDAVENGLEDMCKSIAAGK*
Ga0070707_1002240741	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	QWLDKQGYKVVKSGGDLIVEGNVFNAWEPHGAARYWGGWMANPGVGLEVLVKDSKGNVVAEIRHKAKGTTIRDAVENGLEEVAKAINSGR*
Ga0070699_1012508002	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	TYKTVMVKDFEHNGKSRDSRDAARDGKEYAEQWLEKEGFEVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLEVIAKDSKGGIVAEIRHKAKGSTIRDAVENGLEDVAKSLAKGK*
Ga0070665_1018464872	3300005548	Switchgrass Rhizosphere	YKTVSVTEFDHTGHGSESREAARDGKDYMEQWLEKEGFKVVKSGGDLQVEGNVFNAWEPSGAARYWGGWAANPGVGLELICKSGGKVVGELRHKAKGSTVRDAVENGLEDMAKAVAKGK*
Ga0070704_1005527571	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	GKEYAEQWLEKEGFEVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKNKSGEVVGELRQKAKGSTVPDAVENGLEDMCKSIAAGK*
Ga0066707_108667671	3300005556	Soil	DAAREGKDYMEQWLEKQGFKVVKSGGEIVVEGNVFNAWEPRGAGRYWGGWMANPGVGLEVMVKDSKGAIVAEVRHKAKGTTIRDAVENGLEEVTKAFVGGR*
Ga0068857_1006254881	3300005577	Corn Rhizosphere	PKGSLKGTYKTVMVKDFEHNGKSRDSRDAARDGKEYAEQWLEKEGFEVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKNKSGEVVGELRQKAKGSTVPDAVENGLEDMCKSIAAGK*
Ga0068859_1008930631	3300005617	Switchgrass Rhizosphere	KTVSVTEFDHTGHGSESREAARDGKDYMEQWLEKEGFKVVKSGGDLQVEGNVFNAWEPSGAARYWGGWAANPGVGLELICKSGGKVVGELRHKAKGSTVRDAVENGLEDMAKAVAKGK*
Ga0066903_1009649354	3300005764	Tropical Forest Soil	EGKEYMEQWLQKQGFDVVEKGSADLTIQGNVFNAWEPSGAARAWGGWAANPGVGLELLIKNKSGQVVGELRQKAKGSTIHDAVENGLEDCAKSIAKGK*
Ga0066903_1020285792	3300005764	Tropical Forest Soil	DAAHEGRDYMEQWLDRQGFKVVKSGGDLVVHGNVFNAWEPHGAGRYWGGWMANPGVGLEVIVKDSKGAVVGEIRHKAKGSTIRDAVENGLEEVAKAISAGH*
Ga0074470_103673311	3300005836	Sediment (Intertidal)	LKSYKPVLDKDFESNGKGRDSRDAAREGKEYAEQWLGKEGFDIVEKGADLVIEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKDKSGAVVGELRQKAKGSTIPDAVENGLEDMCKSVARGK*
Ga0068863_1006752712	3300005841	Switchgrass Rhizosphere	AARDGRDYMEQWLEKQGFKVVKTGGDIQIEGNVFNAWEPSGAARAWGGWAANPGVGLELLVKNGKGAVVGELRQKAKGSTLRDAVENGLEDMAKSMSMGK*
Ga0068863_1013817771	3300005841	Switchgrass Rhizosphere	DADWVYFPKGSLKGTYKTVMVKDFEHNGKSRDSRDAARDGKEYAEQWLEKEGFEVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKNKSGEVVGELRQKAKGSTVPDAVENGLEDMCKSIAAGK*
Ga0068858_1011779331	3300005842	Switchgrass Rhizosphere	GFKVVKSGGDLQVEGNVFNAWEPSGAARYWGGWAANPGVGLELICKSGGKVVGELRHKAKGSTVRDAVENGLEDMAKAVAKGK*
Ga0080027_103224812	3300005993	Prmafrost Soil	ASVTEFDHNGHGSECREAAREGQDYMEKWLDKQGFKVVKSGGDIRIDGNVFSAWEPSGAARAWGGWAVNPGVGLELLIKNGKGAVVGELRQKAKGSTLHDAVENGLEDMAKSISAGK*
Ga0068871_1012055331	3300006358	Miscanthus Rhizosphere	KSRDSRDAARDGKEYAEQWLEKEGFEVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLEVMVKDSKGNIVGEVRHKAKGSTIRDAVENGLEEVAKALANGN*
Ga0075425_1023096171	3300006854	Populus Rhizosphere	DYMEQWLEKQGFKVVKSGGDMQIEGNVFNAWEPRGAARYWGGWAANPGVGQELILKAGGKVVGEVRHKAKGSTIRDAVENGLEDCAKAIAKGK*
Ga0075424_1000340521	3300006904	Populus Rhizosphere	EFDETAGGHDARDAARDGKDYAEQWLEREGFKIEKSGGEVTIEGNVCNAWEPRGAARYWGGWYANPGVCLELIAKDGKGAVVGELRHRAKGSTIRDAVENGLEDMVKSLAKGR*
Ga0075435_1015000461	3300007076	Populus Rhizosphere	DGKDYMEQWLEKEGFKVVKSGGELQVEGNVFNAWEPSGAARAWGGWAANPGVGIELLIKDKSGAVVGEIRDKSKGSTIHDAVENGLEDAAKDISKGK*
Ga0099830_109230651	3300009088	Vadose Zone Soil	KDYMEQWLDKQGYKVVKSGGELTVEGNVFNAWEPHGAGRYWGGWMANPGVGLEVAVKDSKGGTVAEIRHKAKGSTIRDAVENGLEEIAKAFNGGK*
Ga0099828_102034431	3300009089	Vadose Zone Soil	DYMEQWLEKQGFKVVKSGGELVVTGNVFNAWEPHGAGRYWGGWMANPGVGLEILAKDSKGNIVGELRHKAKGTTIRDAVENGLEEVAKALVDGK*
Ga0099828_120011841	3300009089	Vadose Zone Soil	REGKDYMEQWLDKQGFKVVKSGGDLHVEGNVFNAWEPHGAARYWGGWAANPGVGLEVILKSGGKVVGEIRHKAKGSTMRDAVENGLEDVAKAISKGK*
Ga0075418_114006281	3300009100	Populus Rhizosphere	IKGTYKTVMVKDFEHNGKSRDSRDAARDGKEYAEQWLEKEGFEVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKNKSGEVVGELRQKAKGSTVPDAVENGLEDMCKSIAAGK*
Ga0075423_116188091	3300009162	Populus Rhizosphere	ARDAAREGKDYMEQWLDKQGFKVVKRDGDIVIEGNVFNAWEPRGAARYWGGWAANPGVGLEVMVKDSKGNIVGEVRHKAKGSTIRDAVENGLEEVAKALANGN*
Ga0105340_14309121	3300009610	Soil	QGKDADWVYFPKGSIKGTYKTVMVKDFEHNGKSRDSRDAARDGKEYAEQWLEKEGFEVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKNKSGEVVGELRQKAKGSTVPDAVENGLEDMCKSIAAGK*
Ga0126374_106888792	3300009792	Tropical Forest Soil	GRDYMEQWLDRQGFKVVKSGGDLVVHGNIFNAWEPHGAGRYWGGWMANPGVGLEVMVKDSKGNVVGEIRHKAKGSTIRDAVENGLEEVAKAISAGR*
Ga0105089_10138241	3300009809	Groundwater Sand	KEGFDVVEKGADLIVEGNIFNAWEPSGAARYWGGWAANPGVGIELLIKDKSGAVVGELRQKAKGSTIPDAVENGLEDMCKSVAAGR*
Ga0105064_10922171	3300009821	Groundwater Sand	GKDADWVYFPKGSLKSYKTVLVKDFENNGKGRDSRDAARDGKEYAEQWLQKEGFDVVEKGADLIVEGNIFNAWEPSGAARYWGGWAANPGVGIELLIKDKSGAVVGELRQKAKGSTIPDAVENGLEDMCKSVAAGR*
Ga0126384_114155541	3300010046	Tropical Forest Soil	AAREGKDYAEEWLEKQGFKVVKSGGDLQIDGNVFNAWEPSGAARYWGGWAANPGVGMELVCKAGGKVVGELRHKAKGSTPRDAVENGLEDMIKAVAKGK*
Ga0126378_101483201	3300010361	Tropical Forest Soil	KMVLDKVLVHTGYVRDALKAASTGKIYTKKWKQKQTFDVVEKGPADITIQGNVFNAWEPSGAARAWGGWAANPGVGMELLIKNKSGQIVAEVRQKAKGSTIHDAVENGLEDCAKSIAKGK
Ga0126377_100696653	3300010362	Tropical Forest Soil	EGFKVVKSGGDLQIEGNVFNAWEPSGAARYWGGWAANPGAGLELICKANGKVVGEVRHKSKGSTPRDAVENALEDMIKAVAKGK*
Ga0126379_129240821	3300010366	Tropical Forest Soil	DYDKLVKGKDADWVYFPDGDLKKYKTVLVKEFEHNGKGREAKEAASYGKEYMEQWLQKQGFDVVDKGPADLTVEGNVFNAWEPSGAARVWGGWGANPGVGTELIIKNKSGTIVAEIREKSKGSTVHDAIENGLEDCAKSISKGK*
Ga0126383_112474832	3300010398	Tropical Forest Soil	VLVKEFENTGKGREAKEAASEGKEYMEQWMQKQGFDVVEKGPADITIQGNVFNAWEPSGAARAWGGWAANPGVGMELLIKNKSGQIVAEVRQKAKGSTIHDAVENGLEDCAKSIAKGK*
Ga0126383_132744271	3300010398	Tropical Forest Soil	PDYDKLVKSKDADWVYFPDGDLKKYKTVLVKEFENTGKGREAKEAASEGKEYMEQWLQKQGFDVVEKGSADLTIQGNVFNAWEPSGAARAWGGWAANPGVGLELLIKNKSGQVVGELRQKAKGSTIHDAVENGLEDCAKSIAKGK*
Ga0134127_135333561	3300010399	Terrestrial Soil	EVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKNKSGEVVGELRQKAKGSTVPDAVENGLEDMCKSIAAGK*
Ga0126350_114473671	3300010880	Boreal Forest Soil	RDAAREGKDYMEQWLDKQGFKVVKRDGDIVIEGNVFNAWEPRGAARYWGGWAANPGVGLEVMVTDSKGNIVGEVRHKAKGSTIRDAVENGLEEVAKALANGN*
Ga0137374_108264701	3300012204	Vadose Zone Soil	REGKDYMEQWLDKQGFKVVKSGGDVTVEGNVFNAWEPRGAGRYWGGWMANPGVGLEVMAKDAKGTILGEIRHKAKGSTIRDAVENGLEDVAKALAAGK*
Ga0137378_113476701	3300012210	Vadose Zone Soil	REFDSNGKGRESRDAAREGKDYMEQWLDKQGYKVVKSGGDLIVEGNVFNAWEPHGAARYWGGWMANPGVGLEVLVKDSKGNVVAEIRHKAKGSTVRDAVENGLEEVAKAINSGR*
Ga0137366_106922671	3300012354	Vadose Zone Soil	RDAAREGKDYMEQWLDKQGFKVVKSGGDFIIEGNVFNAWEPHGAGRYWGGWMANPGVGLEVIAKDSKGNIVGEVRHKAKGSTIRDAVENGLEEVTKALANGN*
Ga0137369_102027973	3300012355	Vadose Zone Soil	YMEQWLEKQGFKVVTSGGDLVVEGNIFNAWEPRGAARYWGGWAANPGVGLELLLKAGGKVVGEVRHKSKGSTPHDAVENGLEDCAKAVAKGR*
Ga0136614_109508631	3300012684	Polar Desert Sand	EQWLEKEGFEIVEKGGELTIDGNVFNAWEPSGGARFWGGWAANPGVGLEVMAKDSKGNTVAQVRHKAKGSTIRDAVENGLEDVAKALLDGR*
Ga0164298_112550001	3300012955	Soil	EQWLQKQGFDVVEKGSADYTVEGNVFNAWEPSGAARVWGGWGANPGVGLELLIKNKGGQVVAELRQKAKGSTIHDAVENGLEEVAKALPDGR*
Ga0164299_107325411	3300012958	Soil	KEFEENGRGREARDAAHEGRDYMEQWLDKQGFKIVKSGGDIVVEGNVFNAWEPHGGARYWGGWMANPGVGVEVLVKDSKGNVVGEIRHKSKGSTVRDAVENALEDVAKAINAGK*
Ga0126369_137164061	3300012971	Tropical Forest Soil	DHTGHGDSRDAARDGKDYMEQWLDKAGFKVVKSGGEMTVSGNVFNAWEPHGAARYWGGWAANPGVGLELLIKANGKVVGEMRHKSKGSTIRDAVENGLEDMAKDIGKAK*
Ga0163162_101486023	3300013306	Switchgrass Rhizosphere	GTYKTVMVKDFEHNGKSRDSRDAARDGKEYAEQWLEKEGFEVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKNKSGEVVGELRQKAKGSTVPDAVENGLEDMCKSIAAGK*
Ga0163162_130917521	3300013306	Switchgrass Rhizosphere	EGFKVVKSGGELQVEGNVFNAWEPSGAARYWGGWAANPGVGLELVCKAGGKVVGELRHKAKGSTVRDAVENGLEDMSKSLAKGK*
Ga0120125_11564711	3300014056	Permafrost	GRGREARDAAREGKDYMEQWLDKQGFKVVKSGGDIVVEGNVFNAWEPHGAARYWGGWAANPGVGMEVLVKDSKGNIVGEVRHKAKGSTIRDAVENGLEEVAKALANGN*
Ga0163163_115347842	3300014325	Switchgrass Rhizosphere	GSECRQAARDGRDYMEQWLEKQGFKVVKSGGDIQIEGNVFNAWEPSGAARAWGGWAANPGVGLELLVKNSKGAVVGELRQKAKGSTLRDAVENGLEDMAKSMSMGK*
Ga0167636_10059711	3300015075	Glacier Forefield Soils	AAHDARDYMEQWLDKQGFKVVKSGGDLVVTGNVFNAWEPRGAGRYWGGWMANPGVGVEVLVKDSKGNVVGEIRHKNKGSTIRDAVENGLEEVAKAISDGR*
Ga0167668_10339632	3300015193	Glacier Forefield Soil	AHEGKDYMEQWLDKQGYKVVKSGGDLIVEGNVFNAWEPHGAARYWGGWMANPGVGLEVLVKDSRGNVVGEIRHKAKGSTIRDAVENGLEEVVKAINSGR*
Ga0132255_1010399542	3300015374	Arabidopsis Rhizosphere	MEQWLEKEGFKVVKSGGELQVEGNVFNAWEPSGAARYWGGWAANPGVGLELVCKAGGKVVGELRHKAKGSTVRDAVENGLEDMSKSLAKGK*
Ga0132255_1057812002	3300015374	Arabidopsis Rhizosphere	GFKVVKTGGDIQIEGHVFNAWEPSGAARAWGGWAANPGVGLELLVKNSKGTVVGELRQKAKGSTLRDAVENGLEDMAKSMSMGK*
Ga0182032_106304511	3300016357	Soil	KKYKTVLVKDFEDTGKGREAKEAASEGKEYMEQWMQKQGFDVVEKGPADITIHGNVFNAWEPSGAARAWGGWAANPGVGLELLIKNKSGQVVGELRQKAKGSTIHDAVENGLEDCAKSIAKGR
Ga0182040_117523191	3300016387	Soil	PDYDKLVKGHDADWVYFPDGDLKKYKTVLVKEFENTGKGREAKEAASEGKEYMEQWLQKQGFDVVEKGPADLTIQGNVFNAWEPSGAARAWGGWAANPGVGLELLVKNKSGQVVGELRQKAKGSTIHDAVENGLEDCAKSIAKGK
Ga0187823_101382522	3300017993	Freshwater Sediment	FEHNGRGREPKEAASYGKEYMEQWLQKQGYDVVEKGPADYTVEGNIFNAWEPSGAARVWGGWGANPGVGMELIIKDKSGAIVAEIREKAKGSTIHDAVENGLEDCAKDIAKGK
Ga0187767_102773441	3300017999	Tropical Peatland	VAGEAARDGKDYAEKWLEKEGFQIVKSGGDLVVEGNVFNAWEPSGGARYWGGWAANPGVGLELLIKDSKGNVVGELRHKAKGSTLRDAVENGLEDMAKSVAKGR
Ga0187787_104637021	3300018029	Tropical Peatland	MPTILVVDDDAHLRDVVQYALEKEGFKVVKSGGDLQIEGNVFNAWEPHGAARYWGGWAANPGVGLELLIKANGKVVGEMRHKAKGSTIRDAVENGLEDMAKDIGRSK
Ga0187766_101287881	3300018058	Tropical Peatland	DAAHEGRDYMEQWLEKQGFKVVKTGGDMVVEGNVFNAWEPHGAARYWGGWAANPGVGMEVIVKDSRGKIVAEVRHKSKGSTIRDAVENGLEDVAKAFSDGR
Ga0184619_102930182	3300018061	Groundwater Sediment	GSETREAAREGKDYVEQWLEKQGFKVVKSGGDLHIEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKAGDKVVGEVRQKAKGSTIRDAVENGLEDAAKSISKGK
Ga0184612_104363361	3300018078	Groundwater Sediment	SVEEFDHTGRGSESREAAREGKDYMEQWLEKEGFKVVKSGGELSVEGNVFNAWEPTGAARYWGGWAANPGVGLELILKAGGKVVGEVRHKAKGSTMRDAVENGLEDISKAIVKGK
Ga0190273_106445262	3300018920	Soil	KSVRVNDFENNGRDRDSKDAAREGKEYMEQWLEKEGFEIVEKGPADLTIDGNVFNAWEPSGAARYWGGWAANPGVGLELMIKDKSGAVVGQLRDKSKGSTIRDAVENGLEDMAKSIAKGK
Ga0193719_104299431	3300021344	Soil	AWREGKDYMEQWLDKQGFKVVKRDGDIVVEGNVFNAWEPRGAARYWGGWAANPGVGLEVMVKDSKGNIVGEVRHKAKGSTIRDAVENGLEEVAKAFSKGE
Ga0210402_114170672	3300021478	Soil	ASEGKEYMEQWMQKQGFDVVEKGPADLTIEGNVFNAWEPSGAARVWGGWGANPGVGLELIIKNKSGQVVAELRQKSKGSTIHDAVENGLEDCAKSIAKGK
Ga0126371_105751042	3300021560	Tropical Forest Soil	GKGREAKEAASEGKEYMEQWMQKQGFDVVEKGPADITIQGNVFNAWEPSGAARAWGGWAANPGVGMELLIKNKSGQIVAEVRQKAKGSTIHDAVENGLEDCAKSIAKGK
Ga0207642_103896972	3300025899	Miscanthus Rhizosphere	LLVGRGRMGRLVENLAAEEGFEVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKNKSGEVVGELRQKAKGSTVPDAVENGLEDMCKSIAAGK
Ga0207652_118323931	3300025921	Corn Rhizosphere	PKGSLKGTYKTVMVKDFEHNGKSRDSRDAARDGKEYAEQWLEKEGFEVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKNKSGEVVGELRQKAKGSTVPDAVENGLEDMCKSIAAGK
Ga0207646_103657671	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	EGKDYMEQWLDKQGYKVVKSGGDLIVEGNVFNAWEPHGAARYWGGWMANPGVGLEVLVKDSKGNVVAEIRHKAKGTTIRDAVENGLEEVAKAINSGR
Ga0207686_114079011	3300025934	Miscanthus Rhizosphere	PDYDKLVQGKDADWVYFPKGSLKGTYKTVMVKDFEHNGKSRDSRDAARDGKEYAEQWLEKEGFEVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKNKSGEVVGELRQKAKGSTVPDAVENGLEDMCKSIAAGK
Ga0207670_100802971	3300025936	Switchgrass Rhizosphere	SVEEFDHTGHGDSRDAARDGKDYMEQWLDKQGFKVVKSGGDMTVSGNVFNAWEPHGAARYWGGWAANPGVGLELLIKANGKVVGEMRHKSKGSTIRDAVENGLEDMAKDIGRSK
Ga0207651_106322522	3300025960	Switchgrass Rhizosphere	QKFLPDYDKLVQGKDADWVYFPKGSLKGTYKTVMVKDFEHNGKSRDSRDAARDGKEYAEQWLEKEGFEVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKNKSGEVVGELRQKAKGSTVPDAVENGLEDMCKSIAAGK
Ga0207677_116487252	3300026023	Miscanthus Rhizosphere	WVYFPKGSLKGTYKTVMVKDFEHNGKSRDSRDAARDGKEYAEQWLEKEGFEVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKNKSGEVVGELRQKAKGSTVPDAVENGLEDMCKSIAAGK
Ga0207703_123360381	3300026035	Switchgrass Rhizosphere	GKDYMEQWLEKEGFKVVKSGGELQVEGNVFNAWEPSGAARYWGGWAANPGVGLELVCKAGGKVVGELRHKAKGSTVRDAVENGLEDMSKSLAKGK
Ga0207678_104144931	3300026067	Corn Rhizosphere	EFDHTGRGTESREAARDGKDYMEQWLEKEGFKVVKSGGELQVEGNVFNAWEPSGAARYWGGWAANPGVGLELVCKAGGKVVGELRHKAKGSTVRDAVENGLEDMSKSLAKGK
Ga0207678_112671841	3300026067	Corn Rhizosphere	YMEQWLEKEGFKVVKSGGELQVEGNVFNAWEPSGAARYWGGWAANPGVGLELVCKAGGKVVGELRHKAKGSTVRDAVENGLEDMSKSLAKGK
Ga0207641_117099221	3300026088	Switchgrass Rhizosphere	YDKLVQGKDADWVYFPKGSLKGTYKTVMVKDFEHNGKSRDSRDAARDGKEYAEQWLEKEGFEVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKNKSGEVVGELRQKAKGSTVPDAVENGLEDMCKSIAAGK
Ga0207675_1023992191	3300026118	Switchgrass Rhizosphere	VKEFEENGRGREARDAAREGKDYMEQWLEKQGFKVVKSGGDIIVEGNVFNAWEPHGAARYWGGWAANPGVGLEVIAKDAKGNIVGEIRHKAKGSTIRDAVENGLEDVAKAMVKGD
Ga0207698_103586024	3300026142	Corn Rhizosphere	GKSRDSRDAARDGKEYAEQWLEKEGFEVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKNKSGEVVGELRQKAKGSTVPDAVENGLEDMCKSIAAGK
Ga0209819_101679691	3300027722	Freshwater Sediment	GRGRDSRDAARDGKEYAEQWLEREGFEIVEKGADIVVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKDKSGEIVGELRQKAKGSTIPDAVENGLEDMCKSIAAGK
Ga0209703_13311971	3300027723	Freshwater Sediment	LKSYKTVMVKDFENTGKGRDSRDAARYGQEYAEQWLEKQGFELAEKNADLVVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKDKSGEVVAEIRQKAKGSTIPDAVENGLEDMCEAIAKGK
Ga0268266_100090851	3300028379	Switchgrass Rhizosphere	TEFDHTGHGTESREAARDGKDYMEQWLEKEGFKVVKSGGDMQIDGNVFNAWEPSGAARYWGGWAANPGVGLELTCKAGGKVVGELRHKAKGSTVRDAVENGLEDMAKSIEKGK
Ga0268266_100664861	3300028379	Switchgrass Rhizosphere	ARQAGIKVVKSGGDMTVSGNVFNAWEPHGAARYWGGWAANPGVGLELLIKANGKVVGEMRHKSKGSTIRDAVENGLEDMAKDIGRSK
Ga0268266_108020842	3300028379	Switchgrass Rhizosphere	WVYFPNGALKGKTVLVKEFEHNGKGREAKEAASYGKEYMEQWLQKQGYDVVEKGPADYTVEGNIFNAWEPSGAARVWGGWGANPGVGMELIIKDKSGAIVAEIREKAKGSTVHDAVENGLEDCAKDISKGK
Ga0265328_103035612	3300031239	Rhizosphere	ASYGKEYMEQWMQKQGFDVVEKGPADITIEGNVFNAWEPSGAARVWGGWAANPGVGLEVLIKNKSGAVVGELRQKAKGSTIHDAVENGLEDCAKSIAHGR
Ga0265339_100538421	3300031249	Rhizosphere	EAKEAASYGKEYMEQWMQKQGFDVVEKGPADITIEGNVFNAWEPSGAARVWGGWAANPGVGLEVLIKNKSGAVVGELRQKAKGSTIHDAVENGLEDCAKSIAHGR
Ga0318515_103653842	3300031572	Soil	DYMEQWLEKQGFKVVKSGGDLVVEGNVFNAWEPHGAARYWGGWAANPGVGVEVLCKAGGKVVGEIRHKSKGSTPHDAVENALEDVAKAISKGK
Ga0318560_106662181	3300031682	Soil	VKEFENTGKGREAKEAASEGKEYMEQWLQKQGFDVVEKGPADLTIQGNVFNAWEPSGAARAWGGWAANPGVGLELLVKNKSGQVVGELRQKAKGSTIHDAVENGLEDCAKSIAKGK
Ga0307469_107130421	3300031720	Hardwood Forest Soil	VYFPDGALKGKTVLVKEFENNGKGREAKEAASYGKEYMEQWLQKQGYDVVEKGAADYTVEGNVFNAWEPSGAARVWGGWGANPGVGMELLIKNKGGQVVAEIRQKAKGSTIHDAVENGLEDCAKAIAKGK
Ga0307468_1004903302	3300031740	Hardwood Forest Soil	GREAKEAASYGKEYMEQWLQKQGYDVVEKGAADYTVEGNVFNAWEPSGAARVWGGWGANPGVGIELLIKSKGGQVVAELRQKAKGSTIHDAVENGLEDCAKSIAKGK
Ga0318554_101093632	3300031765	Soil	DLKKYKTVLVKDFEDTGKGREAKEAASEGKEYMEQWMQKQGFDVVEKGPADITIHGNVFNAWEPSGAARAWGGWAANPGVGLELLIKNKSGQVVGELRQKAKGSTIHDAVENGLEDCAKSIAKGR
Ga0318562_105572142	3300032008	Soil	EAKEAASEGKEYMEQWMQKQGFDVVEKGPADITIQGNVFNAWEPSGAARAWGGWAANPGVGMELLIKNKSGQVVGELRQKAKGSTIHDAVENGLEDCAKSIAKGR
Ga0310906_107691452	3300032013	Soil	KEYAEQWLEKEGFEVVEKNADLIVEGNVFNAWEPSGAARYWGGWAANPGVGLELLIKNKSGEVVGELRQKAKGSTVPDAVENGLEDMCKSIAAGK
Ga0306924_122228001	3300032076	Soil	NNGKGREAKEAASEGKEYMEQWLQKQGFDVVEKGPAELTVEGNVFSAWEPSGAARAWGGWAANPGVGMELIIKNKSGAIVGEIRDKAKGSTIHDAVENGLEDCAKDIAKGK
Ga0307472_1017343021	3300032205	Hardwood Forest Soil	KQGFKVVKSGGDMVVEGNIFNAWEPHGAARYWGGWAANPGVGLELLIKDSKGKVVGEMRHKSKGSTPHDAVENGLEDMAKSIVKGK
Ga0335082_107339011	3300032782	Soil	KLVKGKDADWVYFPNGALKGKTVLVKEFQNNGKGREAKEAASYGKEYMEQWLQKQGYDVVEKGPADYTIEGNVFNAWEPSGAARAWGGWAANPGVGLELLIKDKSGAIVAEIRDKAKGSTIHDAVENGLEDAAKDISKGK
Ga0335079_123290671	3300032783	Soil	DKLVKGKDADWVYFPDGDLKKYKTVLVKEFENNGHGREAKEAASEGKEYMEQWMGKQGFDVVQKGPADITIEGNVFNAWEPSGAARAWGGWAANPGVGMELLIKNKSGQVVGELRQKAKGSTIHDAVENGLEDCAKSIAKGR
Ga0335084_103725732	3300033004	Soil	CRDAAREGKDYMEQWLEKEGFKIVKSGGDMQVEGNIFNAWEPSGAARAWGGWAANPGVGVELIMKANGQVVGEIRHKSKGSTLRDAVENALEDCGKAIAKGK
Ga0335077_122378491	3300033158	Soil	NNGHGREAKEAASEGKEYMEQWMGKQGFDVVQKGPADITIEGNVFNAWEPSGAARAWGGWAANPGVGMELLIKNKSGQVVGELRQKAKGSTIHDAVENGLEDCAKSIAKGR
Ga0326729_10486242	3300033432	Peat Soil	KDSDWVYFPDGSLKNYKTVLVKEFQNNGKGREAKEAASYGKEYMEQWMQKQGFDVVEKGPADITIEGNVFNAWEPSGAARVWGGWAANPGVGLELLIKNKSGAVVGELRQKAKGSTIHDAVENGLEDAAKSIEHGK
Ga0316617_1027159461	3300033557	Soil	LKKWLTKQGFEVVDSGGDMVIDGNVFNAWEPSGGARFWGGWMANPGCGIEVVLKDGKGDILGFVRHKSRGSTIKDAVENGLEEVAKAIAKGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084285

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences