Metagenome Family F084277

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084277
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	72 residues
Representative Sequence	ELYVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSATEVVAVP
Number of Associated Samples	69
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	84.82 %
% of genes from short scaffolds (< 2000 bps)	94.64 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (92.857 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere (86.607 % of family members)
Environment Ontology (ENVO)	Unclassified (91.071 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant surface (89.286 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.12% β-sheet: 28.12% Coil/Unstructured: 68.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF07727	RVT_2	0.89
PF13041	PPR_2	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
All Organisms	root	All Organisms	7.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
cellular organisms	root	All Organisms → cellular organisms	7.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	7.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	7.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	7.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	7.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	7.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	5.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	5.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	5.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	5.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	5.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
Liliopsida	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida	5.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
Petrosaviidae	subclass	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae	5.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
commelinids	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids	5.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
Poales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales	5.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
Poaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	5.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
PACMAD clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade	3.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
Panicoideae	subfamily	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	3.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
Andropogonodae	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae	2.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
Andropogoneae	tribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae	2.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
Sorghinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae	1.79 %
Saccharinae	subtribe	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
Sorghum	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum	1.79 %
Miscanthus	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	92.86 %
Sorghum bicolor	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	1.79 %
Miscanthus lutarioriparius	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002077\|JGI24744J21845_10081472	Not Available	592	Open in IMG/M
3300005840\|Ga0068870_10870045	Not Available	634	Open in IMG/M
3300006358\|Ga0068871_102208651	Not Available	524	Open in IMG/M
3300009036\|Ga0105244_10214133	Not Available	905	Open in IMG/M
3300009098\|Ga0105245_11447644	Not Available	737	Open in IMG/M
3300009176\|Ga0105242_11885077	Not Available	638	Open in IMG/M
3300013297\|Ga0157378_12872003	Not Available	534	Open in IMG/M
3300013308\|Ga0157375_10915701	Not Available	1020	Open in IMG/M
3300014969\|Ga0157376_11148864	Not Available	803	Open in IMG/M
3300015267\|Ga0182122_1057501	Not Available	537	Open in IMG/M
3300015269\|Ga0182113_1010105	Not Available	965	Open in IMG/M
3300015269\|Ga0182113_1093036	Not Available	509	Open in IMG/M
3300015274\|Ga0182188_1051123	Not Available	531	Open in IMG/M
3300015275\|Ga0182172_1068312	Not Available	521	Open in IMG/M
3300015276\|Ga0182170_1070057	Not Available	518	Open in IMG/M
3300015279\|Ga0182174_1012704	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae	859	Open in IMG/M
3300015279\|Ga0182174_1060323	Not Available	560	Open in IMG/M
3300015281\|Ga0182160_1039013	Not Available	627	Open in IMG/M
3300015282\|Ga0182124_1040452	Not Available	618	Open in IMG/M
3300015282\|Ga0182124_1046721	Not Available	594	Open in IMG/M
3300015287\|Ga0182171_1026999	Not Available	706	Open in IMG/M
3300015288\|Ga0182173_1087545	Not Available	500	Open in IMG/M
3300015289\|Ga0182138_1004365	Not Available	1162	Open in IMG/M
3300015289\|Ga0182138_1088694	Not Available	503	Open in IMG/M
3300015291\|Ga0182125_1083399	Not Available	523	Open in IMG/M
3300015292\|Ga0182141_1046457	Not Available	620	Open in IMG/M
3300015292\|Ga0182141_1076740	Not Available	535	Open in IMG/M
3300015294\|Ga0182126_1048401	Not Available	617	Open in IMG/M
3300015295\|Ga0182175_1035771	Not Available	679	Open in IMG/M
3300015295\|Ga0182175_1095745	Not Available	507	Open in IMG/M
3300015298\|Ga0182106_1033410	Not Available	703	Open in IMG/M
3300015299\|Ga0182107_1031702	Not Available	718	Open in IMG/M
3300015299\|Ga0182107_1079099	Not Available	549	Open in IMG/M
3300015300\|Ga0182108_1026962	Not Available	757	Open in IMG/M
3300015302\|Ga0182143_1030859	Not Available	721	Open in IMG/M
3300015302\|Ga0182143_1056014	Not Available	609	Open in IMG/M
3300015303\|Ga0182123_1048558	Not Available	618	Open in IMG/M
3300015303\|Ga0182123_1096683	Not Available	506	Open in IMG/M
3300015307\|Ga0182144_1054899	Not Available	619	Open in IMG/M
3300015314\|Ga0182140_1099262	Not Available	528	Open in IMG/M
3300015321\|Ga0182127_1026568	Not Available	805	Open in IMG/M
3300015321\|Ga0182127_1044535	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	692	Open in IMG/M
3300015321\|Ga0182127_1089878	Not Available	559	Open in IMG/M
3300015323\|Ga0182129_1084485	Not Available	555	Open in IMG/M
3300015338\|Ga0182137_1048884	Not Available	850	Open in IMG/M
3300015340\|Ga0182133_1081986	Not Available	719	Open in IMG/M
3300015341\|Ga0182187_1046059	Not Available	840	Open in IMG/M
3300015341\|Ga0182187_1070714	Not Available	728	Open in IMG/M
3300015342\|Ga0182109_1163821	Not Available	566	Open in IMG/M
3300015343\|Ga0182155_1018112	Not Available	1180	Open in IMG/M
3300015343\|Ga0182155_1189597	Not Available	536	Open in IMG/M
3300015343\|Ga0182155_1198917	Not Available	526	Open in IMG/M
3300015344\|Ga0182189_1158696	Not Available	579	Open in IMG/M
3300015345\|Ga0182111_1013127	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1408	Open in IMG/M
3300015345\|Ga0182111_1125767	Not Available	651	Open in IMG/M
3300015345\|Ga0182111_1133945	Not Available	635	Open in IMG/M
3300015345\|Ga0182111_1213173	Not Available	531	Open in IMG/M
3300015346\|Ga0182139_1141197	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	623	Open in IMG/M
3300015346\|Ga0182139_1180042	Not Available	568	Open in IMG/M
3300015346\|Ga0182139_1232424	Not Available	513	Open in IMG/M
3300015347\|Ga0182177_1080073	Not Available	772	Open in IMG/M
3300015347\|Ga0182177_1116715	Not Available	672	Open in IMG/M
3300015347\|Ga0182177_1234636	Not Available	514	Open in IMG/M
3300015347\|Ga0182177_1244908	Not Available	505	Open in IMG/M
3300015351\|Ga0182161_1111818	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae	710	Open in IMG/M
3300015351\|Ga0182161_1237367	Not Available	527	Open in IMG/M
3300015355\|Ga0182159_1118589	Not Available	801	Open in IMG/M
3300015355\|Ga0182159_1130565	Not Available	769	Open in IMG/M
3300015355\|Ga0182159_1217751	Not Available	620	Open in IMG/M
3300015355\|Ga0182159_1241545	Not Available	592	Open in IMG/M
3300015355\|Ga0182159_1287685	Not Available	548	Open in IMG/M
3300015355\|Ga0182159_1350144	Not Available	503	Open in IMG/M
3300015361\|Ga0182145_1083798	Not Available	667	Open in IMG/M
3300015361\|Ga0182145_1192778	Not Available	504	Open in IMG/M
3300017404\|Ga0182203_1091316	Not Available	609	Open in IMG/M
3300017407\|Ga0182220_1095961	Not Available	521	Open in IMG/M
3300017407\|Ga0182220_1096811	Not Available	519	Open in IMG/M
3300017407\|Ga0182220_1103016	Not Available	510	Open in IMG/M
3300017409\|Ga0182204_1032295	Not Available	745	Open in IMG/M
3300017410\|Ga0182207_1098816	Not Available	612	Open in IMG/M
3300017413\|Ga0182222_1088987	Not Available	529	Open in IMG/M
3300017415\|Ga0182202_1127558	Not Available	517	Open in IMG/M
3300017424\|Ga0182219_1009527	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	1195	Open in IMG/M
3300017425\|Ga0182224_1043840	Not Available	764	Open in IMG/M
3300017425\|Ga0182224_1134370	Not Available	539	Open in IMG/M
3300017427\|Ga0182190_1155863	Not Available	512	Open in IMG/M
3300017430\|Ga0182192_1011170	Not Available	1253	Open in IMG/M
3300017430\|Ga0182192_1154232	Not Available	523	Open in IMG/M
3300017435\|Ga0182194_1019667	Not Available	1068	Open in IMG/M
3300017436\|Ga0182209_1035763	Not Available	827	Open in IMG/M
3300017436\|Ga0182209_1128319	Not Available	556	Open in IMG/M
3300017442\|Ga0182221_1046699	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Saccharinae → Miscanthus → Miscanthus lutarioriparius	749	Open in IMG/M
3300017442\|Ga0182221_1085108	Not Available	624	Open in IMG/M
3300017442\|Ga0182221_1140179	Not Available	535	Open in IMG/M
3300017443\|Ga0182193_1072719	Not Available	706	Open in IMG/M
3300017443\|Ga0182193_1173898	Not Available	525	Open in IMG/M
3300017680\|Ga0182233_1113059	Not Available	508	Open in IMG/M
3300017683\|Ga0182218_1043297	Not Available	739	Open in IMG/M
3300017683\|Ga0182218_1101627	Not Available	572	Open in IMG/M
3300017683\|Ga0182218_1113214	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Andropogonodae → Andropogoneae → Sorghinae → Sorghum → Sorghum bicolor	553	Open in IMG/M
3300017684\|Ga0182225_1023248	Not Available	888	Open in IMG/M
3300017684\|Ga0182225_1112355	Not Available	544	Open in IMG/M
3300017685\|Ga0182227_1108871	Not Available	547	Open in IMG/M
3300017686\|Ga0182205_1087590	Not Available	631	Open in IMG/M
3300017689\|Ga0182231_1123785	Not Available	507	Open in IMG/M
3300025315\|Ga0207697_10024149	Not Available	2490	Open in IMG/M
3300025893\|Ga0207682_10290683	Not Available	765	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	100.00%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	100.00%

Habitat	Taxonomy	Distribution
Phyllosphere	Host-Associated → Plants → Phyllosphere	89.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.68%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified	89.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.25%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.68%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified	89.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.68%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Miscanthus Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Miscanthus Phyllosphere	86.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.68%
Switchgrass Phyllosphere	Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere	2.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002077	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300009036	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015267	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015269	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015274	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015275	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015276	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015279	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015281	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015282	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015287	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015288	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015289	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015291	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015292	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015294	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015295	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015296	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015298	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015299	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015300	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015302	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015303	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015307	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015314	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015321	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015323	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_31MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015338	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015340	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015341	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015342	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015343	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015344	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015345	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_09MAY2016_LD1 MG	Host-Associated	Open in IMG/M
3300015346	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300015347	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_01AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300015351	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015355	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12JUL2016_LD1 MG	Host-Associated	Open in IMG/M
3300015361	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_20JUN2016_LD1 MG	Host-Associated	Open in IMG/M
3300017404	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017407	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017409	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017410	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017413	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017415	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017424	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017425	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017427	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017430	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R3_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017435	Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017436	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017442	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017443	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_22AUG2016_LD1 MG	Host-Associated	Open in IMG/M
3300017680	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017683	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R1_MAIN_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017684	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_NF_03OCT2016_LD1 MG	Host-Associated	Open in IMG/M
3300017685	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_MAIN_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300017686	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R4_MAIN_12SEP2016_LD1 MG	Host-Associated	Open in IMG/M
3300017689	Miscanthus phyllosphere microbial communities from Michigan, USA - G6R2_NF_07NOV2016_LD1 MG	Host-Associated	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24744J21845_100814721	3300002077	Corn, Switchgrass And Miscanthus Rhizosphere	MKSICELYVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGS
Ga0068870_108700452	3300005840	Miscanthus Rhizosphere	MEKGICELYVICGMYVESCTILVVVNCLSRPVVVLDGLPGLYGFKYDSATACGTPLYLYSYKLVGSATAGIRARFNVNCHMCI*
Ga0068871_1022086511	3300006358	Miscanthus Rhizosphere	MMKSICELYVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSATAGIRARFNVNCHKCI*
Ga0105244_102141331	3300009036	Miscanthus Rhizosphere	MYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVSSAIAGTRARFNVNCHMCI*
Ga0105245_114476441	3300009098	Miscanthus Rhizosphere	ELYVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSATAGIRARFNVNCHKCI*
Ga0105242_118850771	3300009176	Miscanthus Rhizosphere	MYVESCTILVVVNRLSRPVVVVDGLPGLYGFKYDNASACGLPLYLYSYKLVGSTTPYTGRFPLVLDATIQKV
Ga0157378_128720031	3300013297	Miscanthus Rhizosphere	MMKSICELYVMCGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYNSATACGLPLYLYSYKLVGSATAGIRARFNVNCHKCIYKQKFCF
Ga0157375_109157011	3300013308	Miscanthus Rhizosphere	MMKSICELYVICDMYVESCMILVVVNHLSRPVAVLDGLPGLYGFKYNSATACGLPLYLYSYKLVGSATL
Ga0157377_115677271	3300014745	Miscanthus Rhizosphere	ICGMYVESCTILVVVNHLSRTVAVLDGLLGLYGFKYDSATACGLPLYLYSYKLVGSATSEIILDGPNGTPR*
Ga0157376_111488642	3300014969	Miscanthus Rhizosphere	VESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSATAGIRARFNVNCYKCI*
Ga0182122_10575011	3300015267	Miscanthus Phyllosphere	DIYVESCTILVVVDRLSRPVVVLDRLPGLYGLKYDSATACGLSLYLCSYKLVGSATRMPQQRAE*
Ga0182113_10101051	3300015269	Miscanthus Phyllosphere	GMYVESCTILVVVNRLSGPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSATL*
Ga0182113_10930362	3300015269	Miscanthus Phyllosphere	ELYVICGMYVESCTILVVVNCLSRSVVVLDGLPGLYGFKYDSATACGLSLFLYSYKLVSSVTFRKGKRGV*
Ga0182188_10511232	3300015274	Miscanthus Phyllosphere	TLMMKSICELYVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSAAACGLPLYLYSYKLVSSAIT*
Ga0182172_10683121	3300015275	Miscanthus Phyllosphere	ICGMYVESCTILVVVNRLLRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSATAIILNKFLITRWVLT*
Ga0182170_10700571	3300015276	Miscanthus Phyllosphere	YVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSATTLSI*
Ga0182174_10127041	3300015279	Miscanthus Phyllosphere	CGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATAYGLPLYLYSYKLVGSATVWSQLA*
Ga0182174_10603231	3300015279	Miscanthus Phyllosphere	MMISICELYVICGMYVESCTILVVVNRLSRPVMVLDGLPGLYVFKYDSATTCGLPLYLYSYKLVGSATITV
Ga0182160_10390131	3300015281	Miscanthus Phyllosphere	MYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATAYGLPLYLYSYKLVGSATLKVWN
Ga0182124_10404521	3300015282	Miscanthus Phyllosphere	MDPASIDMYVESCTILVVINHLSRPVVVLNGLPGLYGFKYDSVTACGLPLYLYSYKLV
Ga0182124_10467211	3300015282	Miscanthus Phyllosphere	MEKCICELYVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGTPLYLYSYKLVGSATLTLFAVVFA*
Ga0182171_10269991	3300015287	Miscanthus Phyllosphere	CDMYVESCTILVVVNCLSRPVVVLDGLPGLYGFKYDSVTACGLPLYLYSYKLVGSVTLLTF*
Ga0182173_10875451	3300015288	Miscanthus Phyllosphere	MYVESCTILVVVDRLSRPVMVLDRLLGLYGLEYDSATACGLPLYLYSYKLVGSVTAGIRARFNVICH
Ga0182138_10043651	3300015289	Miscanthus Phyllosphere	CELYVMCGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYNSATACGLPLYLYSYKLVGSATKKSEGEQFDKKQK*
Ga0182138_10737531	3300015289	Miscanthus Phyllosphere	MYVESCTILVVLNRLSRLVVVLDGLLGLYGFKYDSATACGTPLYLYSYKFVGSATSDAVSERE
Ga0182138_10886941	3300015289	Miscanthus Phyllosphere	CGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSATRVRLFV*
Ga0182125_10833991	3300015291	Miscanthus Phyllosphere	GMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGVPLYLYSYKLVGSATFMDLRESFHL*
Ga0182141_10464571	3300015292	Miscanthus Phyllosphere	FIRTLLTKGICELYVICGMYVESYTILVIVNRLSRPVVVLDGLPGLYGFKCDSATACGLPLYLYSYKLVGSAT*
Ga0182141_10767402	3300015292	Miscanthus Phyllosphere	TLMMKSICELYVICGMYVESYTILVVVNRLSRPVVVLDGLPGLYGFKYNSATACGLPLYLYSYKLVGSATRRFKKFNRKTKP*
Ga0182126_10484011	3300015294	Miscanthus Phyllosphere	ELYVICGMYVESCTILVVVNCLSRPVVVLDGLPGLYGFKYDSATACGTPLYLLYSYKLVGSATAGIRARFNVNCHMCI*
Ga0182126_10769081	3300015294	Miscanthus Phyllosphere	VICGMYVESCTILVVVNRLSRPVVVLDGLLGLYGFKYDSVAACGTPLYLYSYKLVGSTTVQTNQT*
Ga0182175_10357711	3300015295	Miscanthus Phyllosphere	MYVESCMILVVVNHLSRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSTTAGIRARFNINCHMCI*
Ga0182175_10957451	3300015295	Miscanthus Phyllosphere	CELYVMCGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYNSATACGLPLYLYSYKLVSSATHLI*
Ga0182157_10142251	3300015296	Miscanthus Phyllosphere	MYVESCTILVVVNRLSRPVVVLDGLLGFYGFKYDSATACGTPLYLYSYKLISSAIVSYGYRV*
Ga0182106_10334101	3300015298	Miscanthus Phyllosphere	IYELYVICGMYVESCTILVVVNRLSRPIVVLDGLPGLYGFKYDSATACGLLLCLYSYKLVGSAT*
Ga0182107_10317021	3300015299	Miscanthus Phyllosphere	CELYVMCGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYNSATACGLPLYLYSYKLVGSATAVIRARFNINCHMCI*
Ga0182107_10790991	3300015299	Miscanthus Phyllosphere	MYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSVTACGMPLYLYSYKLVGSATSG*
Ga0182107_11007012	3300015299	Miscanthus Phyllosphere	MYVELCMILVVVDHLSRPIVVLNRLPGLYGLKYDSATACGLPLYLCSYKLVGSTTDEDLLEMHAPDDRI*
Ga0182108_10269621	3300015300	Miscanthus Phyllosphere	CELYVICGMYVESCTILVVVNRLSRPIVVLNGLPGLYGFKYDSATACGLPLYLCSYKLVGSATAGIRARFNINCHMCI*
Ga0182143_10308591	3300015302	Miscanthus Phyllosphere	MYVESCTILVVVNRLSRPVVVLDGLSGLYGFKYDSATACGLPLYLYSYKLVGSTTAGIRARFNVNC
Ga0182143_10560141	3300015302	Miscanthus Phyllosphere	LYSHSDVWQCICELYVTCGMYVESCMILVYVGDESRPFVVLDGLPSLYRLKYDSAFACGLPLYLCSYKLDSSITLPFPI*
Ga0182123_10485581	3300015303	Miscanthus Phyllosphere	MYVESCTILVVVNRLSRPVVVLDGLSGLYGFKYDSATACGLPLYLYSYKLVGSMTRACQHATS
Ga0182123_10966831	3300015303	Miscanthus Phyllosphere	MYVESCTILVVVNRSSRPVVVLDGLPSLYGFKYDSAIACGLPLYVCSYKLVGSAIEAMVLTPELE*
Ga0182144_10548991	3300015307	Miscanthus Phyllosphere	ICELYVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFNYDSATPCGLPLYLYSYKLVSSATTEYRKISKFGT*
Ga0182140_10992621	3300015314	Miscanthus Phyllosphere	MTKCICELYVICGMYVDSYTVLVVVNRLSRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSTTAGIRARFNI
Ga0182127_10265681	3300015321	Miscanthus Phyllosphere	CICELYVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSATILNLSPLGEN*
Ga0182127_10445351	3300015321	Miscanthus Phyllosphere	SICELYVICGMYVESCTILVVVNRLSRPVVVLDGLPDLYGFKYDSATACGLPLYLYSYKLVGSATLGRGRQEDEISYGEVGSFG*
Ga0182127_10898781	3300015321	Miscanthus Phyllosphere	MNYICEPYVTCDIYVESCTILVVVKRLSRPVVVLDGLSGLYGFKYDSATACGLPLYLY
Ga0182129_10844851	3300015323	Miscanthus Phyllosphere	MNCICELYVTCDMYVESCTILVESRHFAVLDGLPGLYRLKYDSATTCGLLLYLCSYKLVSSSTAGIGAR
Ga0182137_10488841	3300015338	Switchgrass Phyllosphere	MMKSICELYVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSATAGIRARFNVNCH
Ga0182133_10819861	3300015340	Switchgrass Phyllosphere	YQTRFVITFIHTLMMKCIYELYVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSATAGIRARFNVNCHKCI*
Ga0182187_10460592	3300015341	Miscanthus Phyllosphere	TLMMKSICELYVICGMYVESYTILVVVNRLSRPVAVLDGLPGLYGFKYDSAPACGLPLYLYSYKLVGSATIIII*
Ga0182187_10707141	3300015341	Miscanthus Phyllosphere	SICELYVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSATGGDDDCL*
Ga0182109_11638211	3300015342	Miscanthus Phyllosphere	TLMMKSICELYVICGMYVESCTILVVVNRLSRPVMVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSMTIEESKDEKIVL*
Ga0182155_10181123	3300015343	Miscanthus Phyllosphere	LYVICGMYVESCTILVVVNRLSRPIVVLDRLPGLYGFKYDSATACGLPLYLYSYKLVGSATYGVRE*
Ga0182155_11895971	3300015343	Miscanthus Phyllosphere	ELYVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATAYRTPLYLYSYKLVGSAT*
Ga0182155_11989171	3300015343	Miscanthus Phyllosphere	MMKSICELYVTCDMYVESCTILVVVNRLSIPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSATA
Ga0182189_11586961	3300015344	Miscanthus Phyllosphere	MYVESCTILIVINHLSRPVGVLDGLPGLYGLKYDSAITYGLPLYLCSYKLVGSAIDKLLNFVTAK
Ga0182111_10131274	3300015345	Miscanthus Phyllosphere	RFVITFIRTLMMKCICELYVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLIGSATASIC*
Ga0182111_11257672	3300015345	Miscanthus Phyllosphere	KCICELYVICDMYVESCMILVVVNRLSRPIVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSTTSGIRARFNVNCHMCI*
Ga0182111_11339452	3300015345	Miscanthus Phyllosphere	LYVICGMYVESCMILVVVNRLSRPVVVLDGLPSLYGFKYDSATAGGLPLYLYSYKLVSSVT*
Ga0182111_12131731	3300015345	Miscanthus Phyllosphere	ELYVICGMHVESYTILVVVNRLSRPVVVLDRLPGLYGFKYDSATACGLLSYLYSYKLVGSATRRVRL*
Ga0182139_11411971	3300015346	Miscanthus Phyllosphere	TLMMKSICELYVICGMYVESCTILVVVNRLSRPIVVLDGLLSLYGFKYDRATACGLPLYLYSYKLVGSATTKDQTQV*
Ga0182139_11800422	3300015346	Miscanthus Phyllosphere	YELYVICGMYVESCMILVVVNRLSRPVVVLDGLPSLYGFKYDSATAGGLPLYLYSYKLVSSVT*
Ga0182139_12324241	3300015346	Miscanthus Phyllosphere	ICELYVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFTYDSATACGLPLYLYSYKLVGSATLNITQPIKEG*
Ga0182177_10800731	3300015347	Miscanthus Phyllosphere	ICGMYVESCTILVVVNRLLRPVVVLNRLPGLYGFKYDSVTACGLPLYLYSYKLVGSAT*
Ga0182177_11167152	3300015347	Miscanthus Phyllosphere	GMYVESCTILVVVNRLSRPVVVLDGLPGLYGIKYDSATACGLPLYLYSYKLIGSAT*
Ga0182177_12346361	3300015347	Miscanthus Phyllosphere	MEKCICELYVICGMYVESCTILVVVNHLSRPVVVLDGLPGLGFKYDSATACGLPLYLYSYKLVGSATRSAL*
Ga0182177_12449081	3300015347	Miscanthus Phyllosphere	MMKCICELYVICGIYVESYTILVVVSRLSRPVVVLDGLSGLYGFKYDSATACGLPLYLYSYKLVGSATA
Ga0182161_11118181	3300015351	Miscanthus Phyllosphere	LMMKSICELYVICGMYVESCTILVVVNRLSRPVVVLDGLPDLYGFKYDSATACGLPLYLYSYKLVGSATLGRGRQEDEISYGEVGSFG*
Ga0182161_12373671	3300015351	Miscanthus Phyllosphere	VICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGTPLYLYSYKLVGSATYRGR*
Ga0182159_11185892	3300015355	Miscanthus Phyllosphere	CGMYVESCMILVVVNRLSRPVVVLDGLPSLYGFKYDSATAGGLPLYLYSYKLVSSVT*
Ga0182159_11305651	3300015355	Miscanthus Phyllosphere	VESCMILVVVNRLSRPVVVLDGLPGLYGFKYDSAIACGLLLYLYSYKLVGSATRHLFFDDSP*
Ga0182159_12177511	3300015355	Miscanthus Phyllosphere	KCICELYVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDNATACGLPLYLYSYKLVGSATISITRDALTETTRE*
Ga0182159_12415451	3300015355	Miscanthus Phyllosphere	MYVESCTILVVVNRLSRPVVVLDELPGLYGFKYDSATACGTPLYLYSYKLVGSATHDEVEIE*
Ga0182159_12876851	3300015355	Miscanthus Phyllosphere	VESCMILVVVNRLSRPVMVLDGLSGLYGFKYDSATACGPPLYLYSYKLVGFATDGVSGKPEVWSPTT*
Ga0182159_13501441	3300015355	Miscanthus Phyllosphere	RFVITFIRTLMMKCICELYVICGMYVESCTILVVVNRLSRPVVVLDGLLGFYGFKYDSATACGTPLYLYSYKLISSAIVSYGYRV*
Ga0182145_10837982	3300015361	Miscanthus Phyllosphere	ELYVICDMYVESCTILVVVNRLSRPVVVLDRLPGLYGLKYDSATACGLPLYLCSYKLVGSATVLISPSGEN*
Ga0182145_11927782	3300015361	Miscanthus Phyllosphere	VIYDMYVESYTILVVVNCLSRPVVVLDGLPGLYGFKCDSATACGLSLYLYSYKLVGSATAFTTS*
Ga0182203_10913161	3300017404	Miscanthus Phyllosphere	ELYVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSATEVVAVP
Ga0182220_10959611	3300017407	Miscanthus Phyllosphere	YVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYNSATACGLPLYLYSYKLVGSATPTLFVWMP
Ga0182220_10968111	3300017407	Miscanthus Phyllosphere	LMEKCICELYVICGMYVESCTILVVVNRLSRPVVVLDGLSGLYGFKYDSATACGLPLYLYSYKLVGSATYV
Ga0182220_11030162	3300017407	Miscanthus Phyllosphere	VICDMYVESCTILEVVNRLSRPVVVLDGLPGLYGFKYDSASTCGLPLYLYSYKLVGFATLRQNHKCQPTT
Ga0182204_10322951	3300017409	Miscanthus Phyllosphere	YVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSVTACGLPLYLYSYKLVGSTTADTVVLHAGDSPA
Ga0182207_10988161	3300017410	Miscanthus Phyllosphere	MNCICELYVTCDMYVESYTILVVVNRLSRPVVVLDGLPGLYGFKYDSANACGLQLYLYSYKLVGSAIAR
Ga0182222_10889871	3300017413	Miscanthus Phyllosphere	MMKSICELYVICGMYVESCTILVVVNRLSRPVAVLDGLPGLYGIKYDSATACGLPLYLYSYKLVGSATGMEVLWWHGKWQP
Ga0182202_11275581	3300017415	Miscanthus Phyllosphere	CDMYVESCMILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGMPLYLYSYKLVGSATAGIRARFNINCHMCI
Ga0182219_10095273	3300017424	Miscanthus Phyllosphere	QTRFVITFICTLMMKCIYELYVICGMYVESCMILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLIGSATASIC
Ga0182224_10438401	3300017425	Miscanthus Phyllosphere	ELYVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDGATACGLPLYLYSYKLVGSAIRDASINATSVT
Ga0182224_11343701	3300017425	Miscanthus Phyllosphere	GMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSATPVHPYCQIC
Ga0182190_11558632	3300017427	Miscanthus Phyllosphere	CGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSAIACGLPLYLYSYKLVSSATIRAQRQGPNRPLGLLVEIN
Ga0182192_10111701	3300017430	Miscanthus Phyllosphere	RTLTMKCICELYVICGMYVESCTILVVVNCLSRPVVVLDGLPGLYGFKYDSAIACGLPLYLCSYKLVDSTTSV
Ga0182192_11542321	3300017430	Miscanthus Phyllosphere	MMKCIYELYVICGMYVESCMILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLIGSATASIC
Ga0182194_10196671	3300017435	Switchgrass Phyllosphere	MMKSICELYVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSATAGIRARFNVICH
Ga0182209_10357631	3300017436	Miscanthus Phyllosphere	RTLMEKCICELYVICGMYVESCTILVVVNRLSRPAVVLDGLPGLYGFKYDSATTCRLPLYLYSYKLVGSATSPFFQP
Ga0182209_11283191	3300017436	Miscanthus Phyllosphere	YVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSVTACGLPLYLYSYKLVGSTTAGIRARFNVNCHKCI
Ga0182221_10466991	3300017442	Miscanthus Phyllosphere	LYVICGMYVESCTILVVVNRLSRPVAVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSTTASPSMCFQL
Ga0182221_10851081	3300017442	Miscanthus Phyllosphere	ELYVICGMYVESCTILVVVNRLSRSVMVLDGLPGLYGFEYDSTTACGLSLYLYSYKLVGSATTLI
Ga0182221_11401791	3300017442	Miscanthus Phyllosphere	KCICELYVICDMYVESCMILVVVNRLSRPVVVLDGLSGLYGFMYDSVTTCELPLYLYSYKLVGSMTKVVLLVMSSIATWS
Ga0182193_10727191	3300017443	Miscanthus Phyllosphere	MMKSIRELYVVCGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSATLGAFPTLPHRSTPEPSPR
Ga0182193_11738981	3300017443	Miscanthus Phyllosphere	TRFVITFIRTLMMKCICELYVICGMYVESHTILVVVNRLSRPVVVLDELSGLYGFKYDSATACGPPLYLYSYKLVGSTTSNYNRISN
Ga0182233_11130591	3300017680	Miscanthus Phyllosphere	MKSICELYVICGMYVESCTILVVVNRLSRPGVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVSSVTAGIRARFNVNCHKCI
Ga0182218_10432972	3300017683	Miscanthus Phyllosphere	ELYVICGMYVESCTILVVVNCLSRPVVVLDGLPGLYGFKYDSATAYGLPLYLYSYKLVGSATLKVWN
Ga0182218_11016272	3300017683	Miscanthus Phyllosphere	CICELYVICGMYVESCAILVVINRLSRPVMVLDGLLGLYGFKYDNATACGLPLYLYSYKLVGSATVLLGDLGEVEDPFSP
Ga0182218_11132141	3300017683	Miscanthus Phyllosphere	ELYVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATAYGLPLYLCSYKLVGSATLHPCCWTVNSL
Ga0182225_10232482	3300017684	Miscanthus Phyllosphere	YVESCMILVVVNRLSRPIVVLDGLPGLYRFKYDSATACGLPLYLYSYKLVGSATHDEVEI
Ga0182225_11123551	3300017684	Miscanthus Phyllosphere	FIRTLMMKCICELYVICGMYVESCTILVVVNRLSRPVVVLHGLPGFYGFKYDSATACGLPLYLYSYKLVGSTTEGSPARHI
Ga0182227_11088711	3300017685	Miscanthus Phyllosphere	MNCICELYVTCDMYVESCTILVESRPFMVLDGLSSLYGLKYDSVIACGLPLYLCSYKLVGSATKFFYILNLSVEKAIL
Ga0182205_10875901	3300017686	Miscanthus Phyllosphere	ICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSAITCGTPLYLYSYKLVGSATAGIRARFNVNCHMCI
Ga0182231_11237851	3300017689	Miscanthus Phyllosphere	TLMMKSICELYVMCGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYNSATACGLPLYLYSYKLVGSATAT
Ga0207697_100241492	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MMKSICELYVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSATAGIRARFNVNCHKCI
Ga0207682_102906831	3300025893	Miscanthus Rhizosphere	MMKSICELYVICGMYVESCTILVVVNRLSRPVVVLDGLPGLYGFKYDSATACGLPLYLYSYKLVGSATAGIGARFN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F084277

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences