Metagenome / Metatranscriptome Family F084235

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084235
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	52 residues
Representative Sequence	MKEFVNDIQNLIVKHWGKLIVVFLVVGVITNYNDVKRGVVDGWNSVDNTTQTK
Number of Associated Samples	86
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	20.54 %
% of genes from short scaffolds (< 2000 bps)	74.11 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.714 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine (26.786 % of family members)
Environment Ontology (ENVO)	Unclassified (35.714 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (49.107 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.49% β-sheet: 0.00% Coil/Unstructured: 39.51%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF13905	Thioredoxin_8	6.25
PF00589	Phage_integrase	5.36
PF00239	Resolvase	5.36
PF01381	HTH_3	4.46
PF00196	GerE	3.57
PF06713	bPH_4	1.79
PF13715	CarbopepD_reg_2	1.79
PF03255	ACCA	1.79
PF07394	DUF1501	0.89
PF01527	HTH_Tnp_1	0.89
PF01663	Phosphodiest	0.89
PF00009	GTP_EFTU	0.89
PF13683	rve_3	0.89
PF01757	Acyl_transf_3	0.89
PF13102	Phage_int_SAM_5	0.89
PF07995	GSDH	0.89
PF08299	Bac_DnaA_C	0.89
PF14903	WG_beta_rep	0.89
PF03781	FGE-sulfatase	0.89
PF13660	DUF4147	0.89
PF05193	Peptidase_M16_C	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	5.36
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	5.36
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	1.79
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	0.89
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
All Organisms	root	All Organisms	39.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
cellular organisms	root	All Organisms → cellular organisms	25.00 %
Viruses	superkingdom	All Organisms → Viruses	14.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	23.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	23.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	23.21 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.29 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	9.82 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.89 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.89 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.29 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	9.82 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.89 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.89 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.29 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	9.82 %
Weeksellaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae	0.89 %
Prevotellaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae	0.89 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.29 %
unclassified Chitinophagaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae	5.36 %
Sediminibacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Sediminibacterium	1.79 %
Chryseobacterium group	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae → Chryseobacterium group	0.89 %
Chitinophaga	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga	0.89 %
Prevotella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella	0.89 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.29 %
Chitinophagaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	5.36 %
unclassified Sediminibacterium	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Sediminibacterium → unclassified Sediminibacterium	1.79 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella → environmental samples	0.89 %
Chryseobacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae → Chryseobacterium group → Chryseobacterium	0.89 %
Chitinophaga	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga	0.89 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.29 %
Chitinophagaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	5.36 %
Sediminibacterium sp. C3	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Sediminibacterium → unclassified Sediminibacterium → Sediminibacterium sp. C3	1.79 %
unclassified Chryseobacterium	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae → Chryseobacterium group → Chryseobacterium → unclassified Chryseobacterium	0.89 %
Prevotella stercorea CAG:629	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella → environmental samples → Prevotella stercorea CAG:629	0.89 %
Chitinophaga	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga	0.89 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	14.29 %
Chitinophagaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	5.36 %
Sediminibacterium sp. C3	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Sediminibacterium → unclassified Sediminibacterium → Sediminibacterium sp. C3	1.79 %
Chryseobacterium sp. JV274	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae → Chryseobacterium group → Chryseobacterium → unclassified Chryseobacterium → Chryseobacterium sp. JV274	0.89 %
Prevotella stercorea CAG:629	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella → environmental samples → Prevotella stercorea CAG:629	0.89 %
Chitinophaga	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga	0.89 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000882\|FwDRAFT_10147551	Not Available	514	Open in IMG/M
3300002408\|B570J29032_109787048	Not Available	1323	Open in IMG/M
3300005662\|Ga0078894_10177915	Not Available	1920	Open in IMG/M
3300005662\|Ga0078894_11195242	Not Available	644	Open in IMG/M
3300006112\|Ga0007857_1043328	Not Available	882	Open in IMG/M
3300006120\|Ga0007867_1007009	All Organisms → Viruses → Predicted Viral	2778	Open in IMG/M
3300006484\|Ga0070744_10026196	All Organisms → cellular organisms → Bacteria	1727	Open in IMG/M
3300006484\|Ga0070744_10032469	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1542	Open in IMG/M
3300006805\|Ga0075464_10008547	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Sediminibacterium → unclassified Sediminibacterium → Sediminibacterium sp. C3	4982	Open in IMG/M
3300006805\|Ga0075464_10009800	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4691	Open in IMG/M
3300006805\|Ga0075464_10015416	All Organisms → Viruses → Predicted Viral	3866	Open in IMG/M
3300006805\|Ga0075464_10049586	All Organisms → Viruses → Predicted Viral	2312	Open in IMG/M
3300006805\|Ga0075464_11041539	Not Available	514	Open in IMG/M
3300006862\|Ga0079299_1062306	Not Available	723	Open in IMG/M
3300006875\|Ga0075473_10397863	Not Available	557	Open in IMG/M
3300007162\|Ga0079300_10169683	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300007545\|Ga0102873_1010443	Not Available	2863	Open in IMG/M
3300007548\|Ga0102877_1096449	Not Available	844	Open in IMG/M
3300007549\|Ga0102879_1264526	Not Available	513	Open in IMG/M
3300007550\|Ga0102880_1101692	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	755	Open in IMG/M
3300007557\|Ga0102821_1125033	Not Available	653	Open in IMG/M
3300007597\|Ga0102919_1047189	All Organisms → Viruses → Predicted Viral	1343	Open in IMG/M
3300007600\|Ga0102920_1025961	Not Available	1774	Open in IMG/M
3300007603\|Ga0102921_1324941	Not Available	547	Open in IMG/M
3300007606\|Ga0102923_1226386	Not Available	579	Open in IMG/M
3300007617\|Ga0102897_1027829	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1801	Open in IMG/M
3300007620\|Ga0102871_1061485	All Organisms → Viruses → Predicted Viral	1097	Open in IMG/M
3300007630\|Ga0102903_1205570	Not Available	535	Open in IMG/M
3300007634\|Ga0102901_1131422	Not Available	712	Open in IMG/M
3300007637\|Ga0102906_1061190	Not Available	1072	Open in IMG/M
3300007647\|Ga0102855_1166348	Not Available	589	Open in IMG/M
3300007653\|Ga0102868_1071024	Not Available	776	Open in IMG/M
3300007861\|Ga0105736_1138693	Not Available	550	Open in IMG/M
3300007974\|Ga0105747_1176545	Not Available	698	Open in IMG/M
3300007992\|Ga0105748_10292575	Not Available	690	Open in IMG/M
3300007992\|Ga0105748_10385688	Not Available	603	Open in IMG/M
3300008117\|Ga0114351_1296411	Not Available	768	Open in IMG/M
3300008950\|Ga0102891_1035741	All Organisms → Viruses → Predicted Viral	1561	Open in IMG/M
3300008996\|Ga0102831_1140729	Not Available	801	Open in IMG/M
3300009051\|Ga0102864_1093070	Not Available	821	Open in IMG/M
3300009056\|Ga0102860_1207374	Not Available	562	Open in IMG/M
3300009059\|Ga0102830_1173430	Not Available	632	Open in IMG/M
3300009068\|Ga0114973_10556092	Not Available	591	Open in IMG/M
3300009151\|Ga0114962_10053417	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2651	Open in IMG/M
3300009151\|Ga0114962_10666099	Not Available	535	Open in IMG/M
3300009152\|Ga0114980_10253475	All Organisms → Viruses → Predicted Viral	1027	Open in IMG/M
3300009154\|Ga0114963_10624869	Not Available	563	Open in IMG/M
3300009155\|Ga0114968_10580799	Not Available	595	Open in IMG/M
3300009158\|Ga0114977_10151928	All Organisms → Viruses → Predicted Viral	1378	Open in IMG/M
3300009161\|Ga0114966_10386874	Not Available	822	Open in IMG/M
3300009163\|Ga0114970_10739185	Not Available	521	Open in IMG/M
3300009164\|Ga0114975_10002858	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	11721	Open in IMG/M
3300009180\|Ga0114979_10084064	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1974	Open in IMG/M
3300009181\|Ga0114969_10053043	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	2705	Open in IMG/M
3300009181\|Ga0114969_10150965	All Organisms → Viruses → Predicted Viral	1460	Open in IMG/M
3300009182\|Ga0114959_10007515	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	7817	Open in IMG/M
3300009185\|Ga0114971_10417796	Not Available	759	Open in IMG/M
3300009684\|Ga0114958_10109540	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Chitinophaga	1420	Open in IMG/M
3300010160\|Ga0114967_10509764	Not Available	587	Open in IMG/M
3300010885\|Ga0133913_11455056	Not Available	1739	Open in IMG/M
3300010885\|Ga0133913_12907943	Not Available	1148	Open in IMG/M
3300011009\|Ga0129318_10182621	Not Available	659	Open in IMG/M
3300012006\|Ga0119955_1048817	Not Available	1324	Open in IMG/M
3300012772\|Ga0138287_1173753	Not Available	526	Open in IMG/M
3300013004\|Ga0164293_10618941	Not Available	702	Open in IMG/M
3300013295\|Ga0170791_10843675	Not Available	861	Open in IMG/M
3300020164\|Ga0194037_1000642	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	26893	Open in IMG/M
3300020164\|Ga0194037_1109772	Not Available	950	Open in IMG/M
3300020521\|Ga0208482_1006815	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1829	Open in IMG/M
3300020547\|Ga0208361_1004437	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Sediminibacterium → unclassified Sediminibacterium → Sediminibacterium sp. C3	2347	Open in IMG/M
3300021140\|Ga0214168_1017087	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2093	Open in IMG/M
3300021349\|Ga0194052_1161925	Not Available	760	Open in IMG/M
3300021349\|Ga0194052_1171444	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Prevotella → environmental samples → Prevotella stercorea CAG:629	732	Open in IMG/M
3300021349\|Ga0194052_1280866	Not Available	534	Open in IMG/M
3300021438\|Ga0213920_1035287	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1111	Open in IMG/M
3300021962\|Ga0222713_10044878	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	3425	Open in IMG/M
3300021962\|Ga0222713_10367230	Not Available	895	Open in IMG/M
3300021963\|Ga0222712_10086031	All Organisms → Viruses → Predicted Viral	2233	Open in IMG/M
3300021963\|Ga0222712_10596820	Not Available	638	Open in IMG/M
3300023174\|Ga0214921_10167398	All Organisms → Viruses → Predicted Viral	1448	Open in IMG/M
3300023184\|Ga0214919_10065083	All Organisms → Viruses → Predicted Viral	3340	Open in IMG/M
3300023184\|Ga0214919_10511108	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Weeksellaceae → Chryseobacterium group → Chryseobacterium → unclassified Chryseobacterium → Chryseobacterium sp. JV274	737	Open in IMG/M
3300024343\|Ga0244777_10137064	All Organisms → Viruses → Predicted Viral	1581	Open in IMG/M
3300024343\|Ga0244777_10479027	Not Available	767	Open in IMG/M
3300024346\|Ga0244775_10747170	Not Available	786	Open in IMG/M
3300024348\|Ga0244776_10340591	All Organisms → Viruses → Predicted Viral	1012	Open in IMG/M
3300024348\|Ga0244776_10770500	Not Available	585	Open in IMG/M
3300025732\|Ga0208784_1054860	Not Available	1223	Open in IMG/M
3300025896\|Ga0208916_10006417	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4620	Open in IMG/M
3300025896\|Ga0208916_10096964	All Organisms → Viruses → Predicted Viral	1245	Open in IMG/M
3300025896\|Ga0208916_10124464	Not Available	1100	Open in IMG/M
3300025896\|Ga0208916_10549284	Not Available	503	Open in IMG/M
3300027281\|Ga0208440_1001663	Not Available	6197	Open in IMG/M
3300027418\|Ga0208022_1055717	Not Available	863	Open in IMG/M
3300027518\|Ga0208787_1000167	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	32343	Open in IMG/M
3300027631\|Ga0208133_1030871	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1339	Open in IMG/M
3300027708\|Ga0209188_1016087	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3983	Open in IMG/M
3300027712\|Ga0209499_1168132	Not Available	792	Open in IMG/M
3300027736\|Ga0209190_1205929	Not Available	807	Open in IMG/M
3300027736\|Ga0209190_1206598	Not Available	806	Open in IMG/M
3300027746\|Ga0209597_1018851	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	3813	Open in IMG/M
3300027897\|Ga0209254_10361350	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	1089	Open in IMG/M
3300027969\|Ga0209191_1125582	Not Available	1068	Open in IMG/M
3300034050\|Ga0335023_0047383	All Organisms → Viruses → Predicted Viral	2514	Open in IMG/M
3300034073\|Ga0310130_0005109	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5215	Open in IMG/M
3300034116\|Ga0335068_0092686	Not Available	1703	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.43%
Terrestrial	Environmental → Terrestrial	3.57%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	48.21%
Marine	Environmental → Aquatic → Marine	48.21%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	3.57%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	35.71%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	26.79%
Coastal	Environmental → Aquatic → Marine → Coastal	14.29%
Lentic	Environmental → Aquatic → Freshwater → Lentic	10.71%
Unclassified	Environmental → Aquatic → Marine → Unclassified	7.14%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	3.57%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.89%
Creek	Environmental → Aquatic → Freshwater → Creek	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	35.71%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	26.79%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	14.29%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	7.14%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	4.46%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	3.57%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	3.57%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	26.79%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	23.21%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	9.82%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	5.36%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	4.46%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	3.57%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	3.57%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	3.57%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	3.57%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.68%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	2.68%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	2.68%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	1.79%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.79%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	0.89%
Freshwater And Marine	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater And Marine	0.89%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.89%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.89%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000882	Freshwater microbial communities from the Columbia River	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006112	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Oct08	Environmental	Open in IMG/M
3300006120	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH25Aug08	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300006862	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series LW 2014_7_11	Environmental	Open in IMG/M
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental	Open in IMG/M
3300007162	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series HT 2014_7_11	Environmental	Open in IMG/M
3300007545	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-3	Environmental	Open in IMG/M
3300007548	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-3	Environmental	Open in IMG/M
3300007549	Estuarine microbial communities from the Columbia River estuary - metaG 1548B-02	Environmental	Open in IMG/M
3300007550	Estuarine microbial communities from the Columbia River estuary - metaG 1549A-3	Environmental	Open in IMG/M
3300007557	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715	Environmental	Open in IMG/M
3300007597	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-02	Environmental	Open in IMG/M
3300007600	Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3	Environmental	Open in IMG/M
3300007603	Estuarine microbial communities from the Columbia River estuary - metaG 1568-02	Environmental	Open in IMG/M
3300007606	Estuarine microbial communities from the Columbia River estuary - metaG 1569-02	Environmental	Open in IMG/M
3300007617	Estuarine microbial communities from the Columbia River estuary - metaG 1554B-02	Environmental	Open in IMG/M
3300007620	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-02	Environmental	Open in IMG/M
3300007625	Estuarine microbial communities from the Columbia River estuary - metaG 1546B-02	Environmental	Open in IMG/M
3300007630	Estuarine microbial communities from the Columbia River estuary - metaG 1555C-02	Environmental	Open in IMG/M
3300007634	Estuarine microbial communities from the Columbia River estuary - metaG 1555A-02	Environmental	Open in IMG/M
3300007637	Estuarine microbial communities from the Columbia River estuary - metaG 1556A-02	Environmental	Open in IMG/M
3300007647	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02	Environmental	Open in IMG/M
3300007653	Estuarine microbial communities from the Columbia River estuary - metaG 1546C-3	Environmental	Open in IMG/M
3300007861	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1372B_3um	Environmental	Open in IMG/M
3300007974	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460C_0.2um	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300008117	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NA	Environmental	Open in IMG/M
3300008950	Estuarine microbial communities from the Columbia River estuary - metaG 1552A-02	Environmental	Open in IMG/M
3300008996	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747	Environmental	Open in IMG/M
3300009051	Estuarine microbial communities from the Columbia River estuary - metaG 1449B-02	Environmental	Open in IMG/M
3300009056	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3	Environmental	Open in IMG/M
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental	Open in IMG/M
3300009068	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140807_MF_MetaG	Environmental	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009182	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG	Environmental	Open in IMG/M
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011009	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_DNA	Environmental	Open in IMG/M
3300012006	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1101B	Environmental	Open in IMG/M
3300012772	Freshwater microbial communities from Lake Simoncouche, Canada - S_130826_E_mt (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013295	northern Canada Lakes metatranscriptome co-assembly	Environmental	Open in IMG/M
3300020164	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L304-6m	Environmental	Open in IMG/M
3300020521	Freshwater microbial communities from Lake Mendota, WI - 26SEP2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020547	Freshwater microbial communities from Lake Mendota, WI - 05AUG2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021140	Freshwater microbial communities from Lake Mendota, WI - Practice 29OCT2010 epilimnion	Environmental	Open in IMG/M
3300021349	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-6m	Environmental	Open in IMG/M
3300021438	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 11-17 MG	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300023174	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1505	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300025732	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027281	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02 (SPAdes)	Environmental	Open in IMG/M
3300027418	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747 (SPAdes)	Environmental	Open in IMG/M
3300027518	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series HT 2014_7_11 (SPAdes)	Environmental	Open in IMG/M
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental	Open in IMG/M
3300027708	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027712	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027746	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300034050	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095	Environmental	Open in IMG/M
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental	Open in IMG/M
3300034116	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FwDRAFT_101475512	3300000882	Freshwater And Marine	MKEFVNDIQNLIVKHWAKLLVVVLVVGVITNYNDVKRGFVDGWNSVDNTTQTK*
B570J29032_1097870484	3300002408	Freshwater	MKEFVNDIQILIVKHWGKLLVVFLVVGVITNYNDVKRGVVDGWNSVDNTTTTSKK*
Ga0031656_100724461	3300003858	Freshwater Lake Sediment	AKDIQNLIVKHWGKLILVGIIIGFMSNYNDVKSGFNNGWNNVRHNQTK*
Ga0078894_101779152	3300005662	Freshwater Lake	MKEFVNDIQNLIVKHWGKLIVTVIIVTLLINYKDVYTGFRDGWNSVDITTQSK*
Ga0078894_111952422	3300005662	Freshwater Lake	DIQNLIVKHWGKLIVTVIIVTLLINYKDVYTGARDGFRDGWNSVDNTTQSK*
Ga0007857_10433283	3300006112	Freshwater	LKEFVKDIQNLIVKHWGKLIIVFLIVGTIINYNDVVKGFNDGYNSVRNK*
Ga0007867_10070093	3300006120	Freshwater	MKEFINDIQNLIVKHWVKLIVVFFIVGTIINYNDVVKGFNDGYNSVRNN*
Ga0070744_100261965	3300006484	Estuarine	MKEFVNDIQNLIVKHWGKLLVVVLVVGVITNYNDVKRGVVDGWNSVDNTTQTK*
Ga0070744_100324691	3300006484	Estuarine	MKEFVNDIQNLIVKHWVKLLVVFLVVGVITNYNDVKRGVVDGWNSVDNTTQTK*
Ga0075464_100085475	3300006805	Aqueous	MKEFVKDIQNLIVKHWGKLIVVFLIVGTIINYNDVVKGFNDGYNSVRNK*
Ga0075464_100098003	3300006805	Aqueous	MKEFVNDIQNLIVKHYGKLIIVLIIVGLVMNYNDIIKGFNDGYNIVRRS*
Ga0075464_100154162	3300006805	Aqueous	MKEFVKDIQNLIVKHWGKLIVVFFIVGIITNYNDVKRGFVNGWNKGYSGETNTQSNK*
Ga0075464_100495863	3300006805	Aqueous	MKEFVNDIQNLIVKHWGKLIVVFLVVGTIINHNDVVKGFNDGWNSVDNNTTLDK*
Ga0075464_110415391	3300006805	Aqueous	MKEFVNDIQNLIKKHWGKLIIVLIVVGLLMNYNDIIKGFNDGYNSVRRS*
Ga0079299_10623062	3300006862	Deep Subsurface	MKEFVNDIQNLIVKHWGKLLVVFLVVGFITNFKDVKRGVVDGWNSVDNTTQSK*
Ga0075473_103978632	3300006875	Aqueous	MKEFVNDIQNLIVKHWGKLIVVFFIVGIITNYNDVKRGFVNGWNKGYSGETNTQSNK*
Ga0079300_101696832	3300007162	Deep Subsurface	MKEFVNDIQNLIAKHWGKLIVVFLIVGTIINYNDVVKGFKDGYNSVRNK*
Ga0102873_10104434	3300007545	Estuarine	MKEFVNDIQNLIVKHWGKLIVVFLIVGIISNYNDVKRGFMDGWNSVDNTTKSN*
Ga0102877_10964491	3300007548	Estuarine	KEFVNDIQNLIVKHWAKLLVVVLVVGVITNYNDVKRGFVDGWNSVDNTTQTK*
Ga0102879_12645262	3300007549	Estuarine	MKEYINDVQNLIVKHWGKLILLSVLVFFIVSFTFNYNDVDRGFNDGYKFLKIK*
Ga0102880_11016921	3300007550	Estuarine	MKEFVNDIQNLIVKHWGKLIVVCLVVGIISNYNDVKRGFMDGWNSVDNTTKSN*
Ga0102821_11250332	3300007557	Estuarine	MKEFVNDIQNLIVKHWGKLLVVVLVVGVITNYNDVKRGFVDGWNSVDNTTQTK*
Ga0102919_10471891	3300007597	Estuarine	ISMKEFVNDIQNLIVKHWGKLIVVFLIVGIISNYNDVKRGFMDGWNSVDNTTKSN*
Ga0102920_10259612	3300007600	Estuarine	MKEFVNDIQNLIVKHWGKLIVVFLIVGIISNYNDVKRGFMDGWNSVDNTTQTK*
Ga0102921_13249412	3300007603	Estuarine	LIVKHWGKLLVVVLVVGVITNYNDVKRGVVDGWNSVDNTTQTK*
Ga0102923_12263861	3300007606	Estuarine	MKEYINDVQNLIVKHWGKLLVVCLVVGIITNFNDDKRGVVDGWNSVDNTTKSN*
Ga0102897_10278294	3300007617	Estuarine	MKEFVNDIQNLIVKHWAKLLVVVLVVGVITNYNDVKRGVVDGWNSVDNTTQTK*
Ga0102871_10614853	3300007620	Estuarine	MKEYINDVQNLIVKHWGKLLVVCLVVGIITNFNDVKRGVVDGWNSVDNTTKSN*
Ga0102870_12334881	3300007625	Estuarine	MKEFVNDIQNLIVKHWGKLLVVVLVVGVITNYNDVKRGVVDGW
Ga0102903_12055701	3300007630	Estuarine	ICMKEFVNDIQNLIVKHWGKLLVVVLVVGVITNYNDVKRGVVDGWNSVDNTTQTK*
Ga0102901_11314221	3300007634	Estuarine	ISMKEYINDVQNLIVKHWGKLLVVCLVVGIITNFNDVKRGVVDGWNSVDNTTKSN*
Ga0102906_10611903	3300007637	Estuarine	MKEFVNDIQNLIVKHWAKLLVVVLVVGVITNYNDVKRGFVDGWNSVDNTTKSN*
Ga0102855_11663481	3300007647	Estuarine	KHWGKLIVITIIVTLLINYKDVYNGSRDGWNSGWNSVDDSTQSK*
Ga0102855_11682062	3300007647	Estuarine	GKLLVVCLVVGIITNFNDDKRGVVDGWNSVYNTTKSN*
Ga0102868_10710243	3300007653	Estuarine	MKEFVNDIQNLIVKHWGKLIVVFLTVGTIINYNDVKRCFVDGWNSVDNTTQTK*
Ga0105736_11386931	3300007861	Estuary Water	MKDFVNDIQNLIVKHWGKLLVVCLVVGIITNFNDVKRGVVDGWNSVDNTTKSN*
Ga0105747_11765453	3300007974	Estuary Water	MKEFVNDIQNLIVKHWGKLIVVFLVVGTIINFNDVKRGVVDGWNSVDNTTKSN*
Ga0105748_102925751	3300007992	Estuary Water	MKDFVNDIQNLIVKHWGKLILLSVLVFFIVSFTFNYDDVVKGFTDGYNSVRNK*
Ga0105748_103856881	3300007992	Estuary Water	MKEFVNDIQNLIVKHWGKLLVVCLVVGIITNFNDVKRGVVDGWNSVDNTTKSN*
Ga0114351_12964112	3300008117	Freshwater, Plankton	MKEFVNDIQNLIVKHWGKLLVITIIVTLLINYKDVYNGSRDGWNSGWNSVDDSTQSK*
Ga0102891_10357414	3300008950	Estuarine	MKEFVNDIQNLIVKHWGKLIVVFLIVGIISNYNDVKRGFMDGWNSVDNTTNSN*
Ga0102831_11407291	3300008996	Estuarine	MKDFVNDIQNLIVKHWGKLILLSVLVFFIVSFTFNYNDVVRGFNDGYKFLKIK*
Ga0102864_10930703	3300009051	Estuarine	MKEFVNDIQNLIVKHWGKLIVVCLVVGIITNFNDVKRGVVDGWNSVDNTTKSN*
Ga0102860_12073741	3300009056	Estuarine	SISMKEFVNDIQNLIVKHWGKLIVVVLVVGVITNYNDVKRGVVDGWNSVDNTTQTK*
Ga0102830_11520703	3300009059	Estuarine	QNLIVKHWGKLLVVCLVVGIITNFNDDKRGVVDGWNSVDNTTKSN*
Ga0102830_11734302	3300009059	Estuarine	MKEFVNEIQNLMVKHWAKLLVVVLVVGVITNYNDVKRGFVDGWNSVDNTTQT
Ga0114973_105560923	3300009068	Freshwater Lake	MKEFVNDIQNLIVKHWGKLLVVFLLVGFITNFNDVKRGVVDGWNSVETNNQSK*
Ga0114962_100534174	3300009151	Freshwater Lake	MKEFVNDIQNLIVKHWGKLIVIFLIVGTIINYNDVVKGFNDGYNSVRNK*
Ga0114962_106660991	3300009151	Freshwater Lake	FVNDIQNLIVKHWGKLIIVVLVVGIITNYKDFKRGVVDGWNSVDNTTQTK*
Ga0114980_102534752	3300009152	Freshwater Lake	MKEFVNDIQNLIVKHWGKLLVVFLVVGVITNFNDVKKGIVDGWNSVDNTTQTK*
Ga0114963_106248692	3300009154	Freshwater Lake	ISMKESVNDIQNLIVKHWGKLLVVFLVVGVITNFNDVKRGVVDGWNSVDNTTQTK*
Ga0114968_105807991	3300009155	Freshwater Lake	MKEFVNDIQNLIVKHWVKLLVVFLVVGVITNFNDVKRGVVDGWNSVDNTTQTK*
Ga0114977_101519283	3300009158	Freshwater Lake	MKEFVNDIQNLIVKHWGKLIVVFLVVGIITNFNDVKRGVVDGWNSVDNTTQTK*
Ga0114966_103868741	3300009161	Freshwater Lake	DIQNLIVKHWGKLLVVCLVVGIITNFNDVKRGVVDGWNSVDNTTQTK*
Ga0114970_107391851	3300009163	Freshwater Lake	MKEFVNDIQNLIVKHWVKLLVVFLVVGVITNFNDVKRGVVDGWNSVDNTT
Ga0114975_1000285814	3300009164	Freshwater Lake	MKEFVKDIQNLIVKHWGKLIVVFLIVGTIFNYNDVKRGVLDGWKSVNNTTQTK*
Ga0114979_100840643	3300009180	Freshwater Lake	MKEFVNDIQNLIVKHWGKLLVVFLLVGFITNFNEVKRGVVDGWNSVETNNQSK*
Ga0114969_100530433	3300009181	Freshwater Lake	MKEYINDIQNLIVKHWGKLLVVCLVVGIITNFNDVKRGVVDGWNSVDNTTQTK*
Ga0114969_101509652	3300009181	Freshwater Lake	MKEFVNDIQNLIVKHWGKLIVVFLIVGTIINYNDVKKGVVDGWNSVDNTTQTK*
Ga0114959_100075154	3300009182	Freshwater Lake	MKEFVNDIQNLIVKHWGKLIIVVLVVGIITNYKDFKRGVVDGWNSVDNTTQTK*
Ga0114971_104177962	3300009185	Freshwater Lake	MKEFVNDIQNLIVKHWGRLIVFSVLVFFIISFTFNYDDVVKGFNDGYNSVRNK*
Ga0114958_101095403	3300009684	Freshwater Lake	MKEFVKDIQNLIVKHWGKLIVVFLIVGTIINFNDVKRGFMNGWNNGYNTTQTK*
Ga0114967_105097642	3300010160	Freshwater Lake	MKEYINDIQNLIVKHWGKLLVVCLVVGIITNFNDVKRGVVDGRNSVDNTTQTK*
Ga0133913_114550562	3300010885	Freshwater Lake	MKKFINYVQNLIVKHWGKLIVVFLIIGTIINYNDVKRGFTNGWNKGYSGETNTQSNK*
Ga0133913_129079432	3300010885	Freshwater Lake	MKEFVNDIQNLIVKHWGKLLVVFLVVGVITNFNDVKKGIVDGWNSVETNNQSK*
Ga0129318_101826211	3300011009	Freshwater To Marine Saline Gradient	KDIQNLIVKHWGKLIVVFLIVGTIINYNDVVKGFNDGYNSVRNK*
Ga0119955_10488173	3300012006	Freshwater	MKEFVNDIQNLIVKHWGKLLVVFLVVGFITNFNDVKRGVVDGWNSVDNTTQTK*
Ga0138287_11737532	3300012772	Freshwater Lake	MKQFVNDIQNLIVKHWGKLLVVFLIVGTIINYNDVKRGFVDGWNSVDNTTQTK*
Ga0164293_106189412	3300013004	Freshwater	MKEFVNDIQNLIVKHWGKLIVTVIIVTLLINYKDVYNGARDGWNSGWNSAQNTTQSK*
Ga0170791_108436751	3300013295	Freshwater	ISMKEFVNDIQNLIVKHWVKLLVVFLVVGVITNFNDVKRGVVDGWNSVDNTTQTK*
Ga0194037_100064215	3300020164	Anoxic Zone Freshwater	MKEFVNDIQNLIVKHWGKLLVVVLVVGVITNYNDVKRGVVDGWNSVDNTTQTK
Ga0194037_11097721	3300020164	Anoxic Zone Freshwater	MKEFINDIQNLIVKHWGKLLVVFLIVGTIINYNDVKRGFVDGWNSVETNN
Ga0208482_10068155	3300020521	Freshwater	MKEFVNDIQILIVKHWGKLLVITIIVTLLINYKDVYNGSRDGWNSGWNSVDDSTQSK
Ga0208361_10044375	3300020547	Freshwater	MKEFVNDIQILIVKHWGKLLVVFLVVGVITNYNDVKRGVVDGWNSVDNTTTTSKK
Ga0214168_10170872	3300021140	Freshwater	MKEFVNDIQNLIVKHWGKLLVVFLVVGVITNYNDVKRGVVDGWNSVDNTTTTSKK
Ga0194052_11619251	3300021349	Anoxic Zone Freshwater	MKEFVNDIQNLIVKHWGKLIVVFLVVGIISNFNDVKRGFMNGWNSVDN
Ga0194052_11714441	3300021349	Anoxic Zone Freshwater	MKEFVNDIQNLIVKHWGKLIVVFLIVGTIINYNDVKKGVVDGWNSVDNTTQTK
Ga0194052_12808662	3300021349	Anoxic Zone Freshwater	MKEFVNDIQNLIVKHWGKLLVVVLVVGVITNYNDVKRGFMDGWNSVDNTTQTK
Ga0213920_10352872	3300021438	Freshwater	MKEFVNDIKNLIVKHWGKLIVAFLIVGTIINYKDVVKGFNDGYNSVSNK
Ga0222713_100448784	3300021962	Estuarine Water	MKEFVNDIQNLIVKHWAKLLVVVLVVGVITNYNDVKRGFVDGWNSVDNTTQTK
Ga0222713_103672303	3300021962	Estuarine Water	MKEFVKDIQNLIVKHWGKLIVVFLIVGTIINYNDVVKGFNDGYNSVRNK
Ga0222712_100860312	3300021963	Estuarine Water	MKEYINDVQNLIVKHWGKLLLVVLVVGVITNYNDVKRGVVDGWNKGYNGETNTKSK
Ga0222712_105968201	3300021963	Estuarine Water	IQNLIVKHWVKLLVVFLVVGVITNFNDVKRGVVDGWNSVDNTTQTK
Ga0214921_101673981	3300023174	Freshwater	MKEFVKDFQNLIVKHWGKLIVVFLIVGTIINYNDVKKGVVDGWNSVDNTTHTK
Ga0214919_100650837	3300023184	Freshwater	MKEFVNDIQNLIVKHWGKLLVVFLVVGFITNFNDVKRGVVDGWNSVETNNQSK
Ga0214919_105111082	3300023184	Freshwater	MKEFVNDIQNLIVKHWGKLIVVVLVVGVITNYNDVKRGVVDGWNSVDNTTQTK
Ga0244777_101370644	3300024343	Estuarine	MKEFVNDIQNLIVKHWGKLIVVFLIVGIISNYNDVKRGFMDGWNSVDNTTKSN
Ga0244777_104790272	3300024343	Estuarine	MKEYINDVQNLIVKHWGKLLVVVLVVGVITNYNDVKRGVVDGWNSVDNTTQTK
Ga0244775_107471703	3300024346	Estuarine	MKDFVNDIQNLIVKHWGKLILLSVLVFFIVSFTFNYNDVVRGFNDGYKFLKIK
Ga0244776_103405912	3300024348	Estuarine	MKEFVNDIQNLIVKHWGKLIVVFLVVGTIINFNDVKRGVVDGWNSVDNTTQTK
Ga0244776_107705002	3300024348	Estuarine	MKEFVKDIQNLIVKHWGKLIVTVIIVTLLINYKDVYTGARDGFRDGWNSVDNTTQSK
Ga0208784_10548605	3300025732	Aqueous	MKDFVNDIQNLIVKHWGKLIVVFFIVGIITNYNDVKRGFVNGWNK
Ga0208916_100064173	3300025896	Aqueous	MKEFVNDIQNLIVKHYGKLIIVLIIVGLVMNYNDIIKGFNDGYNIVRRS
Ga0208916_100969642	3300025896	Aqueous	MKEFVKDIQNLIVKHWGKLIVVFFIVGIITNYNDVKRGFVNGWNKGYSGETNTQSNK
Ga0208916_101244642	3300025896	Aqueous	MKEFVNDIQNLIVKHWGKLIVVFLVVGTIINHNDVVKGFNDGWNSVDNNTTLDK
Ga0208916_105492842	3300025896	Aqueous	MKEFVNDIQNLIVKHWGKLLVVVLVIGVITNYNDVKRGVVDGWNSVETNNQSK
Ga0208440_10016631	3300027281	Estuarine	KPICMKEFVNDIQNLIVKHWGKLIVVFLIVGIISNYNDVKRGFMDGWNSVDNTTKSN
Ga0208022_10557173	3300027418	Estuarine	MKEYINDVQNLIVKHWGKLLVVCLVVGIITNFNDDKRGVVDGWNSVDNTTKSN
Ga0208787_10001679	3300027518	Deep Subsurface	MKEFVNDIQNLIVKHWGKLLVVFLVVGFITNFKDVKRGVVDGWNSVDNTTQSK
Ga0208133_10308711	3300027631	Estuarine	MKEFVNDIQNLIVKHWVKLLVVFLVVGVITNYNDVKRGVVDGWNSVDNTTQTK
Ga0209188_10160874	3300027708	Freshwater Lake	MKEFVNDIQNLIVKHWGKLIIVVLVVGIITNYKDFKRGVVDGWNSVDNTTQTK
Ga0209499_11681321	3300027712	Freshwater Lake	MKEFVNDIQNLIVKHWGKLIVIFLIVGTIINYNDVVKGFNDGYNSVRNK
Ga0209190_12059291	3300027736	Freshwater Lake	KLHNMKEFVNDIQNLIVKHWGKLIIVVLVVGITINYNDVKRGFVDGWNSVDNTTQTK
Ga0209190_12065983	3300027736	Freshwater Lake	MKEFVNDIQNLIVKHWGKLLVVFLLVGFITNFNDVKRGVVDGWNSVETNNQSK
Ga0209597_10188513	3300027746	Freshwater Lake	MKEYINDIQNLIVKHWGKLLVVCLVVGIITNFNDVKRGVVDGWNSVDNTTQTK
Ga0209254_101462221	3300027897	Freshwater Lake Sediment	MSEFAKDIQNLIVKHWGKLILVGIIIGFMSNYNDVKSGFNNGWNNVRHNQTK
Ga0209254_103613502	3300027897	Freshwater Lake Sediment	MSEFAKDFQNLIVKHWGKLIVVGLNIGFISNYNDVKSGFNDGWNSVRHNQIK
Ga0209254_104736971	3300027897	Freshwater Lake Sediment	MRVFVKETQNLIVKHWGKLIVVVLLIVFISNYNDFKTGFNEGWNSVRHNQTK
Ga0209191_11255824	3300027969	Freshwater Lake	MKEFVKDIQNLIVKHWGKLIVVFLIVGTIFNYNDVKRGVLDGWKSVNNTTQTK
Ga0335023_0047383_554_715	3300034050	Freshwater	MKEFVNDIQNLIVKHWGKLIVVFLVVGVITNYNDVKRGVVDGWNSVDNTTQTK
Ga0310130_0005109_1169_1330	3300034073	Fracking Water	MKEFVNDIQNLIVKNWGKLIVLSVLVFFIVSFTFNYNDVVRGFNDGYNSVRNK
Ga0335068_0092686_477_638	3300034116	Freshwater	MKEYINDVQNLIVKHWGKLIVVVLVVGVITNYNDVKRGVVDGWNSVDNTTKSN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084235

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences