Metagenome / Metatranscriptome Family F084191

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084191
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	50 residues
Representative Sequence	MNTRHRRKRLYPADEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT
Number of Associated Samples	66
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	51.79 %
% of genes near scaffold ends (potentially truncated)	58.04 %
% of genes from short scaffolds (< 2000 bps)	75.00 %
Associated GOLD sequencing projects	52
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.036 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge (61.607 % of family members)
Environment Ontology (ENVO)	Unclassified (98.214 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (96.429 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.26% β-sheet: 0.00% Coil/Unstructured: 40.74%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF05866	RusA	19.64
PF01870	Hjc	9.82
PF08774	VRR_NUC	8.04
PF01555	N6_N4_Mtase	4.46
PF03237	Terminase_6N	2.68
PF01807	zf-CHC2	1.79
PF03796	DnaB_C	1.79
PF03592	Terminase_2	1.79
PF16677	GP3_package	0.89
PF13155	Toprim_2	0.89
PF13489	Methyltransf_23	0.89
PF12728	HTH_17	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	19.64
COG1591	Holliday junction resolvase Hjc, archaeal type	Replication, recombination and repair [L]	9.82
COG0863	DNA modification methylase	Replication, recombination and repair [L]	4.46
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	4.46
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	4.46
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	1.79
COG0358	DNA primase (bacterial type)	Replication, recombination and repair [L]	1.79
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	1.79
COG3728	Phage terminase, small subunit	Mobilome: prophages, transposons [X]	1.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
All Organisms	root	All Organisms	41.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
cellular organisms	root	All Organisms → cellular organisms	33.04 %
Viruses	superkingdom	All Organisms → Viruses	8.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.04 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.36 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	2.68 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.68 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.36 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	2.68 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.68 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.89 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.89 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	25.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.36 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.68 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	2.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.89 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.89 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	25.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.36 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.68 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.68 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %
Candidatus Aminicenantes	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes	0.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	10.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.36 %
Syntrophorhabdales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales	3.57 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	2.68 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.68 %
Syntrophobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales	1.79 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.89 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.89 %
unclassified Aminicenantes	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes	0.89 %
Deltaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis	0.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
Deltaproteobacteria bacterium ADurb.Bin135	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	10.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.36 %
Syntrophorhabdaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae	3.57 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	2.68 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.68 %
Syntrophaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae	1.79 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.89 %
Achromobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter	0.89 %
Candidatus Aminicenantes bacterium ADurb.Bin147	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium ADurb.Bin147	0.89 %
SAR324 cluster	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → SAR324 cluster	0.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
Deltaproteobacteria bacterium ADurb.Bin135	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	10.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.36 %
Syntrophorhabdus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus	3.57 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.68 %
Bacteroidaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae	1.79 %
Syntrophus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus	1.79 %
SAR324 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → SAR324 cluster → SAR324 cluster bacterium	0.89 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.89 %
Achromobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter	0.89 %
Candidatus Aminicenantes bacterium ADurb.Bin147	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium ADurb.Bin147	0.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
Deltaproteobacteria bacterium ADurb.Bin135	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	10.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.36 %
unclassified Syntrophorhabdus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus → unclassified Syntrophorhabdus	2.68 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.68 %
Bacteroides	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides	1.79 %
unclassified Syntrophus (in: Bacteria)	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria)	1.79 %
SAR324 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → SAR324 cluster → SAR324 cluster bacterium	0.89 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.89 %
Achromobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter	0.89 %
Candidatus Aminicenantes bacterium ADurb.Bin147	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium ADurb.Bin147	0.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
Deltaproteobacteria bacterium ADurb.Bin135	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	10.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	5.36 %
Syntrophorhabdus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus → unclassified Syntrophorhabdus → Syntrophorhabdus sp.	2.68 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	2.68 %
Syntrophus sp. PtaB.Bin001	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. PtaB.Bin001	1.79 %
Bacteroides	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides	1.79 %
SAR324 cluster bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → SAR324 cluster → SAR324 cluster bacterium	0.89 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.89 %
Achromobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter	0.89 %
Candidatus Aminicenantes bacterium ADurb.Bin147	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium ADurb.Bin147	0.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2027040000\|ADn_FTWC1V111GUEIB	Not Available	527	Open in IMG/M
3300006594\|Ga0079073_1227777	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	571	Open in IMG/M
3300006805\|Ga0075464_10047551	Not Available	2357	Open in IMG/M
3300006805\|Ga0075464_10113631	Not Available	1567	Open in IMG/M
3300009655\|Ga0116190_1137564	Not Available	881	Open in IMG/M
3300009655\|Ga0116190_1174047	Not Available	749	Open in IMG/M
3300009655\|Ga0116190_1254427	Not Available	580	Open in IMG/M
3300009655\|Ga0116190_1307949	Not Available	512	Open in IMG/M
3300009664\|Ga0116146_1018868	Not Available	3841	Open in IMG/M
3300009666\|Ga0116182_1272177	Not Available	710	Open in IMG/M
3300009666\|Ga0116182_1442053	Not Available	505	Open in IMG/M
3300009667\|Ga0116147_1088408	Not Available	1348	Open in IMG/M
3300009669\|Ga0116148_1057402	Not Available	2114	Open in IMG/M
3300009669\|Ga0116148_1257597	Not Available	730	Open in IMG/M
3300009669\|Ga0116148_1400433	Not Available	543	Open in IMG/M
3300009670\|Ga0116183_1087077	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1693	Open in IMG/M
3300009670\|Ga0116183_1362555	Not Available	613	Open in IMG/M
3300009673\|Ga0116185_1045030	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2424	Open in IMG/M
3300009673\|Ga0116185_1347448	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium ADurb.Bin147	627	Open in IMG/M
3300009673\|Ga0116185_1352311	Not Available	621	Open in IMG/M
3300009673\|Ga0116185_1412426	Not Available	560	Open in IMG/M
3300009675\|Ga0116149_1046092	All Organisms → Viruses → Predicted Viral	2621	Open in IMG/M
3300009676\|Ga0116187_1337547	Not Available	669	Open in IMG/M
3300009681\|Ga0116174_10268337	Not Available	831	Open in IMG/M
3300009681\|Ga0116174_10502184	Not Available	552	Open in IMG/M
3300009681\|Ga0116174_10557766	Not Available	517	Open in IMG/M
3300009687\|Ga0116144_10163271	Not Available	1213	Open in IMG/M
3300009687\|Ga0116144_10303161	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	820	Open in IMG/M
3300009687\|Ga0116144_10360588	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	734	Open in IMG/M
3300009690\|Ga0116143_10060576	Not Available	2306	Open in IMG/M
3300009690\|Ga0116143_10259739	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	909	Open in IMG/M
3300009690\|Ga0116143_10590058	Not Available	545	Open in IMG/M
3300009693\|Ga0116141_10133680	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	1437	Open in IMG/M
3300009693\|Ga0116141_10574690	Not Available	562	Open in IMG/M
3300009715\|Ga0116160_1172075	Not Available	866	Open in IMG/M
3300009767\|Ga0116161_1126394	Not Available	1177	Open in IMG/M
3300009767\|Ga0116161_1278143	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	682	Open in IMG/M
3300009767\|Ga0116161_1380158	Not Available	551	Open in IMG/M
3300009769\|Ga0116184_10175598	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1000	Open in IMG/M
3300009769\|Ga0116184_10224962	Not Available	841	Open in IMG/M
3300009771\|Ga0116155_10245283	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	741	Open in IMG/M
3300010311\|Ga0116254_1024130	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus → unclassified Syntrophorhabdus → Syntrophorhabdus sp.	2633	Open in IMG/M
3300010346\|Ga0116239_10089580	All Organisms → Viruses → Predicted Viral	2595	Open in IMG/M
3300010347\|Ga0116238_10095658	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides	2291	Open in IMG/M
3300010351\|Ga0116248_10004471	Not Available	21166	Open in IMG/M
3300010353\|Ga0116236_10168263	All Organisms → Viruses → Predicted Viral	2021	Open in IMG/M
3300010355\|Ga0116242_10260927	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus	1680	Open in IMG/M
3300010356\|Ga0116237_10959237	Not Available	720	Open in IMG/M
3300010356\|Ga0116237_11348108	Not Available	589	Open in IMG/M
3300010365\|Ga0116251_10003898	Not Available	22791	Open in IMG/M
3300010365\|Ga0116251_10383445	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	778	Open in IMG/M
3300010429\|Ga0116241_10553868	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	896	Open in IMG/M
3300014206\|Ga0172377_10060507	All Organisms → cellular organisms → Bacteria	3554	Open in IMG/M
3300020814\|Ga0214088_1230967	Not Available	1135	Open in IMG/M
3300020814\|Ga0214088_1303975	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4104	Open in IMG/M
3300020814\|Ga0214088_1716628	Not Available	528	Open in IMG/M
3300020814\|Ga0214088_1753599	Not Available	796	Open in IMG/M
3300020814\|Ga0214088_1764516	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	1068	Open in IMG/M
3300021603\|Ga0226659_10035734	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3195	Open in IMG/M
3300021603\|Ga0226659_10084256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Achromobacter	1690	Open in IMG/M
3300021603\|Ga0226659_10137314	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1206	Open in IMG/M
3300023207\|Ga0255811_10498109	Not Available	1506	Open in IMG/M
3300023207\|Ga0255811_10773097	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. PtaB.Bin001	727	Open in IMG/M
3300023207\|Ga0255811_10966284	Not Available	631	Open in IMG/M
3300025629\|Ga0208824_1025855	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus → unclassified Syntrophorhabdus → Syntrophorhabdus sp.	2488	Open in IMG/M
3300025677\|Ga0209719_1060649	All Organisms → Viruses → Predicted Viral	1290	Open in IMG/M
3300025682\|Ga0209718_1014738	All Organisms → cellular organisms → Bacteria → Proteobacteria	4323	Open in IMG/M
3300025682\|Ga0209718_1024441	Not Available	2846	Open in IMG/M
3300025689\|Ga0209407_1008753	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus → unclassified Syntrophorhabdus → Syntrophorhabdus sp.	6917	Open in IMG/M
3300025708\|Ga0209201_1067344	Not Available	1413	Open in IMG/M
3300025713\|Ga0208195_1036116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2236	Open in IMG/M
3300025714\|Ga0208458_1045292	Not Available	1776	Open in IMG/M
3300025715\|Ga0209310_1007171	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5610	Open in IMG/M
3300025720\|Ga0208197_1046008	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → SAR324 cluster → SAR324 cluster bacterium	1815	Open in IMG/M
3300025720\|Ga0208197_1061518	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Bacteroidaceae → Bacteroides	1479	Open in IMG/M
3300025724\|Ga0208196_1199453	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	626	Open in IMG/M
3300025730\|Ga0209606_1036122	Not Available	2401	Open in IMG/M
3300025737\|Ga0208694_1042739	Not Available	2137	Open in IMG/M
3300025748\|Ga0208459_1087696	Not Available	1236	Open in IMG/M
3300025748\|Ga0208459_1263350	Not Available	555	Open in IMG/M
3300025859\|Ga0209096_1297943	Not Available	580	Open in IMG/M
3300025861\|Ga0209605_1093548	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	1230	Open in IMG/M
3300025871\|Ga0209311_1218060	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	753	Open in IMG/M
(restricted) 3300028561\|Ga0255343_1046529	Not Available	2240	Open in IMG/M
(restricted) 3300028564\|Ga0255344_1068834	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium ADurb.Bin135	1741	Open in IMG/M
(restricted) 3300028564\|Ga0255344_1113546	All Organisms → Viruses → Predicted Viral	1191	Open in IMG/M
(restricted) 3300028567\|Ga0255342_1079888	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	1614	Open in IMG/M
(restricted) 3300028568\|Ga0255345_1074381	All Organisms → Viruses → Predicted Viral	1747	Open in IMG/M
(restricted) 3300028568\|Ga0255345_1079348	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1662	Open in IMG/M
(restricted) 3300028570\|Ga0255341_1071675	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1725	Open in IMG/M
(restricted) 3300028570\|Ga0255341_1143761	Not Available	1029	Open in IMG/M
(restricted) 3300028576\|Ga0255340_1002516	Not Available	21210	Open in IMG/M
(restricted) 3300028593\|Ga0255347_1003353	Not Available	20924	Open in IMG/M
3300028626\|Ga0302244_1019538	Not Available	1877	Open in IMG/M
3300028626\|Ga0302244_1024490	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1565	Open in IMG/M
3300028626\|Ga0302244_1027714	Not Available	1412	Open in IMG/M
3300028626\|Ga0302244_1048762	Not Available	888	Open in IMG/M
3300028626\|Ga0302244_1060854	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	742	Open in IMG/M
3300028627\|Ga0302243_1023823	Not Available	1669	Open in IMG/M
3300028629\|Ga0302248_1047254	Not Available	1068	Open in IMG/M
3300028631\|Ga0302241_1107354	Not Available	569	Open in IMG/M
3300028634\|Ga0302242_1093723	Not Available	655	Open in IMG/M
3300028638\|Ga0302240_1022079	Not Available	2125	Open in IMG/M
3300028638\|Ga0302240_1050480	Not Available	1102	Open in IMG/M
3300028644\|Ga0302238_1024756	Not Available	2262	Open in IMG/M
3300028757\|Ga0307350_110193	Not Available	1182	Open in IMG/M
3300029288\|Ga0265297_10674696	Not Available	649	Open in IMG/M
3300029799\|Ga0311022_11031763	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae → Syntrophus → unclassified Syntrophus (in: Bacteria) → Syntrophus sp. PtaB.Bin001	1262	Open in IMG/M
3300029799\|Ga0311022_11919827	Not Available	1579	Open in IMG/M
3300029799\|Ga0311022_12278842	Not Available	587	Open in IMG/M
3300029799\|Ga0311022_13139287	Not Available	753	Open in IMG/M
3300029799\|Ga0311022_16236579	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1463	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Engineered	Engineered	98.21%
Environmental	Environmental	1.79%

Habitat	Taxonomy	Distribution
Wastewater	Engineered → Wastewater	73.21%
Bioreactor	Engineered → Bioreactor	14.29%
Built Environment	Engineered → Built Environment	8.93%
Aquatic	Environmental → Aquatic	1.79%
Solid Waste	Engineered → Solid Waste	1.79%

Habitat	Taxonomy	Distribution
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	72.32%
Anaerobic	Engineered → Bioreactor → Anaerobic	14.29%
Water Treatment Plant	Engineered → Built Environment → Water Treatment Plant	8.93%
Marine	Environmental → Aquatic → Marine	1.79%
Landfill	Engineered → Solid Waste → Landfill	1.79%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	72.32%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	14.29%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified	8.93%
Coastal	Environmental → Aquatic → Marine → Coastal	1.79%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified	1.79%
Dissolved Organics (Anaerobic)	Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic)	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	72.32%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	14.29%
Unclassified	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified	8.93%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.79%
Unclassified	Engineered → Solid Waste → Landfill → Unclassified → Unclassified	1.79%
Unclassified	Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic) → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	61.61%
Activated Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Activated Sludge	10.71%
Wastewater	Engineered → Built Environment → Water Treatment Plant → Unclassified → Unclassified → Wastewater	8.93%
Anaerobic Digester Digestate	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester Digestate	7.14%
Granular Sludge	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Granular Sludge	7.14%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	1.79%
Landfill Leachate	Engineered → Solid Waste → Landfill → Unclassified → Unclassified → Landfill Leachate	1.79%
Wastewater	Engineered → Wastewater → Nutrient Removal → Dissolved Organics (Anaerobic) → Unclassified → Wastewater	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2027040000	Wastewater viral communities from wastewater treatment facility in Singapore - AD-no assembly	Engineered	Open in IMG/M
3300006594	Active sludge microbial communities from Illinois, USA, of municipal wastewater-treating anaerobic digesters - ADurb_Ile_03_SludgeMetaT (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300009655	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR4_MetaG	Engineered	Open in IMG/M
3300009664	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHG2_MetaG	Engineered	Open in IMG/M
3300009666	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG	Engineered	Open in IMG/M
3300009667	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHG3_MetaG	Engineered	Open in IMG/M
3300009669	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG	Engineered	Open in IMG/M
3300009670	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC078_MetaG	Engineered	Open in IMG/M
3300009673	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA7_MetaG	Engineered	Open in IMG/M
3300009675	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC057_MetaG	Engineered	Open in IMG/M
3300009676	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA6_MetaG	Engineered	Open in IMG/M
3300009681	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC087_MetaG	Engineered	Open in IMG/M
3300009687	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC035_MetaG	Engineered	Open in IMG/M
3300009690	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC034_MetaG	Engineered	Open in IMG/M
3300009693	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC097_MetaG	Engineered	Open in IMG/M
3300009715	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS2_MetaG	Engineered	Open in IMG/M
3300009767	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS3_MetaG	Engineered	Open in IMG/M
3300009769	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA5_MetaG	Engineered	Open in IMG/M
3300009771	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC032_MetaG	Engineered	Open in IMG/M
3300010311	AD_JPTRca	Engineered	Open in IMG/M
3300010346	AD_USMOca	Engineered	Open in IMG/M
3300010347	AD_JPHGca	Engineered	Open in IMG/M
3300010351	AD_USPNca	Engineered	Open in IMG/M
3300010353	AD_USCAca	Engineered	Open in IMG/M
3300010355	AD_USDVca	Engineered	Open in IMG/M
3300010356	AD_USDEca	Engineered	Open in IMG/M
3300010365	AD_USDIca	Engineered	Open in IMG/M
3300010429	AD_USRAca	Engineered	Open in IMG/M
3300014206	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Pumphouse #3 metaG	Engineered	Open in IMG/M
3300020814	Granular sludge microbial community from anaerobic digester, University of Toronto, Ontario, Canada - UASBVu03_granules megahit	Engineered	Open in IMG/M
3300021603	Granular sludge microbial community from anaerobic digester, University of Toronto, Ontario, Canada - UASBVu03_granules spades	Engineered	Open in IMG/M
3300023207	Combined Assembly of Gp0238866, Gp0238878, Gp0238879	Engineered	Open in IMG/M
3300025629	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNTR3_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025677	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS2_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025682	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNAS1_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025689	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNHG3_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025708	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025713	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC077_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025714	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC085_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025715	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC030_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025720	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA4_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025724	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA7_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025730	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC057_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025737	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC078_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025748	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC087_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025859	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC034_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025861	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC035_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025871	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC045_MetaG (SPAdes)	Engineered	Open in IMG/M
3300028561 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant16	Engineered	Open in IMG/M
3300028564 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant18	Engineered	Open in IMG/M
3300028567 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant14	Engineered	Open in IMG/M
3300028568 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant20	Engineered	Open in IMG/M
3300028570 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant12	Engineered	Open in IMG/M
3300028576 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant10	Engineered	Open in IMG/M
3300028593 (restricted)	Wastewater microbial communities from Lulu Island WWTP, Vancouver, Canada - plant24	Engineered	Open in IMG/M
3300028626	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Phe	Engineered	Open in IMG/M
3300028627	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Met	Engineered	Open in IMG/M
3300028629	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Leu	Engineered	Open in IMG/M
3300028631	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Arg	Engineered	Open in IMG/M
3300028634	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Lys	Engineered	Open in IMG/M
3300028638	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_His	Engineered	Open in IMG/M
3300028644	Enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAG_UR_Asn	Engineered	Open in IMG/M
3300028757	Metatranscriptome of enriched activated sludge microbial communities from anaerobic digester in WTTP, New Holstein, Wisconsin, United States - AAT_UR_Phe1 (Metagenome Metatranscriptome)	Engineered	Open in IMG/M
3300029288	Leachate microbial communities from a municipal landfill in Southern Ontario, Canada - Leachate well 137-91	Engineered	Open in IMG/M
3300029799	Metagenomes from anaerobic digester of solid waste, Toronto, Canda. Combined Assembly of Gp0238878, Gp0238879, Gp0242100, Gp0242119	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
AD_na_697740	2027040000	Wastewater	MYPADEQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDKEMT
Ga0079073_12277771	3300006594	Anaerobic Digestor Sludge	MNTRHRRKRLYPADEQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDKEMT*
Ga0075464_100475512	3300006805	Aqueous	MKFWMVVREGQYRRKRLYPADEQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGREKEMT*
Ga0075464_101136313	3300006805	Aqueous	MNTRHRRKRMYPTHEQEKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT*
Ga0116190_11375641	3300009655	Anaerobic Digestor Sludge	KRLYPAEEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT*
Ga0116190_11740471	3300009655	Anaerobic Digestor Sludge	KRLYPAEEQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDKEMT*
Ga0116190_12544271	3300009655	Anaerobic Digestor Sludge	MNTRHRRKRLYPAEEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEG
Ga0116190_13079491	3300009655	Anaerobic Digestor Sludge	MTVTRHRRKRLYPAEEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEG
Ga0116146_10188684	3300009664	Anaerobic Digestor Sludge	MNTRHRRKRLYPAEEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT*
Ga0116182_12721772	3300009666	Anaerobic Digestor Sludge	MYPADEQAKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDNEIEEVR*
Ga0116182_14420531	3300009666	Anaerobic Digestor Sludge	MYPADEQAKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT*
Ga0116147_10884083	3300009667	Anaerobic Digestor Sludge	MTVTRHRRKRLYPADEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT*
Ga0116148_10574021	3300009669	Anaerobic Digestor Sludge	SKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDKEMT*
Ga0116148_12575972	3300009669	Anaerobic Digestor Sludge	MNTRHRRKRLYPAHEQAKRDEYFRDMGQLKMDERRLRQKRNFELWCEGRDKEMT*
Ga0116148_14004332	3300009669	Anaerobic Digestor Sludge	MYPTHEQEKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT*
Ga0116183_10870771	3300009670	Anaerobic Digestor Sludge	YPAEEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDNEIEEVR*
Ga0116183_13625551	3300009670	Anaerobic Digestor Sludge	KRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT*
Ga0116185_10450303	3300009673	Anaerobic Digestor Sludge	MNTRHRRKRLYPADEQAKRDEYFREVGQIKMDERRLKQKRNFELWCEGRDNEIEEVR*
Ga0116185_13474481	3300009673	Anaerobic Digestor Sludge	MNTRHRRKRLYPADEQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEG
Ga0116185_13523111	3300009673	Anaerobic Digestor Sludge	MTVTRHRRKRLYPAHEQAKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDNEIEEVR*
Ga0116185_14124261	3300009673	Anaerobic Digestor Sludge	MTVTRHRRKRLYPAEEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT*
Ga0116149_10460926	3300009675	Anaerobic Digestor Sludge	MNTRHRRKRMYPAHEQAKRDEYFREVGQIKMDKRRLRQKRNFELWCEGRDKEMT*
Ga0116187_13375472	3300009676	Anaerobic Digestor Sludge	MTVTRHRRKRLYPAHEQEKRDEYFREVGQIKMDERRLKQKRNFELWCEGRDNEIEDVR*
Ga0116174_102683372	3300009681	Anaerobic Digestor Sludge	MYPADEQAKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGREKEMT*
Ga0116174_105021842	3300009681	Anaerobic Digestor Sludge	MTVTRHRRKRLYPADEQAKRDEYFREVGQIKMDERRLKQKRNFELWCEGRDNEIEEVR*
Ga0116174_105577662	3300009681	Anaerobic Digestor Sludge	DEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT*
Ga0116144_101632713	3300009687	Anaerobic Digestor Sludge	MNTRHRRKRLYPADEQAKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDKEM
Ga0116144_103031611	3300009687	Anaerobic Digestor Sludge	TRHRRKRLYPADEQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDKEMT*
Ga0116144_103605881	3300009687	Anaerobic Digestor Sludge	EQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDNEIEEVR*
Ga0116143_100605765	3300009690	Anaerobic Digestor Sludge	MYPAHEQAKRDEYFREVGQIKMDKRRLRQKRNFELWCE
Ga0116143_102597392	3300009690	Anaerobic Digestor Sludge	MNTRHRRKRLYPADEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDNEIEEVR*
Ga0116143_105900582	3300009690	Anaerobic Digestor Sludge	MNTRHRRKRLYPADEQAKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT*
Ga0116141_101336801	3300009693	Anaerobic Digestor Sludge	LYPADEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEGREKEMT*
Ga0116141_105746903	3300009693	Anaerobic Digestor Sludge	MNTRHRRKRLYPADEQSKRDEYFREVGQIKMDERRLKQKRNFELWCEGRD
Ga0116160_11720752	3300009715	Anaerobic Digestor Sludge	MNTRHRRKRLYPADEQAKRDEYFREVGQIKMDERRLKQKRNFELWCEGRDNEIEDVR*
Ga0116161_11263941	3300009767	Anaerobic Digestor Sludge	MYPTHEQEKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDKEMT*
Ga0116161_12781433	3300009767	Anaerobic Digestor Sludge	MEVEMNTRHRRKRLYPADEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDDQIEEVR*
Ga0116161_13801581	3300009767	Anaerobic Digestor Sludge	DEYFRDIGLLKMDEKRLRQKRNFELWCEGRDKEMT*
Ga0116184_101755983	3300009769	Anaerobic Digestor Sludge	RDEYFREVGQIKMDERRLKQKRNFELWCEGRDNEIEEVR*
Ga0116184_102249621	3300009769	Anaerobic Digestor Sludge	PAHEQEKRDEYFREVGQIKMDERRLKQKRNFELWCEGRDNEIEDVR*
Ga0116155_102452833	3300009771	Anaerobic Digestor Sludge	MYPADEQAKRDEYFREVGQIKMDERRLKQKRNFELWCEGRDNEIEEVR*
Ga0116254_10241301	3300010311	Anaerobic Digestor Sludge	QSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDKEMT*
Ga0116239_100895805	3300010346	Anaerobic Digestor Sludge	EEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT*
Ga0116238_100956583	3300010347	Anaerobic Digestor Sludge	MNTRHRRKRLYPAEEQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDKEMT*
Ga0116248_100044711	3300010351	Anaerobic Digestor Sludge	DEQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDKEMT*
Ga0116236_101682635	3300010353	Anaerobic Digestor Sludge	MEAQMNTRHRRKRLYPSDEQSKRDSYFREVGQIKMDERRLKQKRNFELWCEGRDEEMT*
Ga0116242_102609271	3300010355	Anaerobic Digestor Sludge	MYPTHEQEKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDKE
Ga0116237_109592371	3300010356	Anaerobic Digestor Sludge	VTRHRRKRLYPADEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT*
Ga0116237_113481082	3300010356	Anaerobic Digestor Sludge	TRHRRKRLYPADEQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDNEIEEVR*
Ga0116251_100038981	3300010365	Anaerobic Digestor Sludge	HRRKRMYPADEQAKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT*
Ga0116251_103834453	3300010365	Anaerobic Digestor Sludge	HRRKRMYPADEQAKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDNEIEEVR*
Ga0116241_105538682	3300010429	Anaerobic Digestor Sludge	MYPAHEQEKRDEYFREVGMLKMDERRLRQKRNFELWCEGRDKEMT*
Ga0172377_100605076	3300014206	Landfill Leachate	MEVEMNTRHRRKRMYPADEQAKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT*
Ga0214088_12309675	3300020814	Granular Sludge	EQEKRDKYFREAGLLKMDARRIKQKRNFELWCEGRENEIDTVQSL
Ga0214088_13039755	3300020814	Granular Sludge	MSTRHRRKKLYPPDEQKKRDDYFREAGLLKMDARRLRQKRNFELWCEGREKEMT
Ga0214088_17166282	3300020814	Granular Sludge	MNTRHRRKRMYPADEQSKRDEYFRDIGLLKMDERRMRQKRNFELWCEGREKEMT
Ga0214088_17535992	3300020814	Granular Sludge	MTVTRHRRKRLYPADEQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDKEMT
Ga0214088_17645163	3300020814	Granular Sludge	MNTRHRRKRLYPADEQAKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDNEIEEVR
Ga0226659_100357344	3300021603	Granular Sludge	MNTRHRRKRLYPADEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDNEIEEVR
Ga0226659_100842561	3300021603	Granular Sludge	RLYPADEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEGREKEMT
Ga0226659_101373144	3300021603	Granular Sludge	MSTHHRRKKLYPPDEQKKRDDYFREAGLLTSDERRIRQKRNFELWCEGRDNEIDTVQSL
Ga0255811_104981095	3300023207	Anaerobic Digester Digestate	MSTRHRRKKLYPADEQEKRDKYFREAGLLKMDARRIKQKRNFELWCEGRENEIDTVQSL
Ga0255811_107730972	3300023207	Anaerobic Digester Digestate	MNTRHRRKRLYPADEQAKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT
Ga0255811_109662841	3300023207	Anaerobic Digester Digestate	MNTRHRRKRLYPADEQSKRDEYFRDIGLLKMDERRMRQKRNFELWCEGREKEMT
Ga0208824_10258556	3300025629	Anaerobic Digestor Sludge	EMNTRHRRKRLYPADEQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDKEMT
Ga0209719_10606492	3300025677	Anaerobic Digestor Sludge	MNTRHRRKRLYPADEQAKRDEYFREVGQIKMDERRLKQKRNFELWCEGRDNEIEDVR
Ga0209718_10147389	3300025682	Anaerobic Digestor Sludge	RHRRKRLYPAEEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT
Ga0209718_102444110	3300025682	Anaerobic Digestor Sludge	MNTRHRRKRLYPAEEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEGR
Ga0209407_10087539	3300025689	Anaerobic Digestor Sludge	MNTRHRRKRLYPAEEQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDKEMT
Ga0209201_10673441	3300025708	Anaerobic Digestor Sludge	KRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDKEMT
Ga0208195_10361166	3300025713	Anaerobic Digestor Sludge	EEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDNEIEEVR
Ga0208458_10452924	3300025714	Anaerobic Digestor Sludge	MNTRHRRKRMYPTHEQEKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT
Ga0209310_10071715	3300025715	Anaerobic Digestor Sludge	MNTRHRRKRMYPADEQAKRDEYFREVGQIKMDERRLKQKRNFELWCEGRDNEIEEVR
Ga0208197_10460085	3300025720	Anaerobic Digestor Sludge	QGEAMTVTRHRRKRLYPAEEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT
Ga0208197_10615184	3300025720	Anaerobic Digestor Sludge	MNTRHRRKRLYPAEEQSKRDEYFRDIGLLKMDERRLRQKRNFEL
Ga0208196_11994531	3300025724	Anaerobic Digestor Sludge	DEQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDKEMT
Ga0209606_10361227	3300025730	Anaerobic Digestor Sludge	MNTRHRRKRLYPAHEQAKRDEYFRDMGQLKMDERRLRQKRNFELWCEGRDKEMT
Ga0208694_10427397	3300025737	Anaerobic Digestor Sludge	DEQAKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT
Ga0208459_10876963	3300025748	Anaerobic Digestor Sludge	THEQEKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT
Ga0208459_12633502	3300025748	Anaerobic Digestor Sludge	MTVTRHRRKRLYPADEQAKRDEYFREVGQIKMDERRLKQKRNFELWCEGRDNEIEEVR
Ga0209096_12979432	3300025859	Anaerobic Digestor Sludge	TRHRRKRLYPADEQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDNEIEEVR
Ga0209605_10935481	3300025861	Anaerobic Digestor Sludge	YPADEQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDKEMT
Ga0209311_12180603	3300025871	Anaerobic Digestor Sludge	MNTRHRRKRLYPADEQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDDQIEEVR
(restricted) Ga0255343_10465291	3300028561	Wastewater	MNTRHRRKCLYPAEEQAKRDEYFRDIGLLKMDERRLRQKRNFELWCE
(restricted) Ga0255344_10688345	3300028564	Wastewater	YRRKRLYPADEQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDKEMT
(restricted) Ga0255344_11135461	3300028564	Wastewater	MEVEMNTRHRRKRLYPAEEQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDKEMT
(restricted) Ga0255342_10798881	3300028567	Wastewater	MNTRHRRKRLYPADEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT
(restricted) Ga0255345_10743811	3300028568	Wastewater	MNTRHRRKRMYPADEQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEG
(restricted) Ga0255345_10793481	3300028568	Wastewater	MNTRHRRKRLYPADEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEGR
(restricted) Ga0255341_10716752	3300028570	Wastewater	MNTRHRRKRLYPADEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEGREKEMT
(restricted) Ga0255341_11437611	3300028570	Wastewater	SKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT
(restricted) Ga0255340_10025162	3300028576	Wastewater	MNTRHRRKRMYPTHEQEKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDKEMT
(restricted) Ga0255347_10033531	3300028593	Wastewater	KRDEYFRDIGLLKMDEKRLRQKRNFELWCEGREKEMT
Ga0302244_10195385	3300028626	Activated Sludge	HRRKRLYPADEQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDDQIEEVR
Ga0302244_10244901	3300028626	Activated Sludge	MNTRHRRKRLYPADEQAKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRD
Ga0302244_10277141	3300028626	Activated Sludge	NTRHRRKRLYPADEQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDKEMT
Ga0302244_10487623	3300028626	Activated Sludge	MTVTRHRRKRLYPADEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT
Ga0302244_10608541	3300028626	Activated Sludge	RKRLYPADEQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDEEMT
Ga0302243_10238231	3300028627	Activated Sludge	KRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT
Ga0302248_10472541	3300028629	Activated Sludge	RMYPTHEQEKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT
Ga0302241_11073543	3300028631	Activated Sludge	RDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDDQIEEVR
Ga0302242_10937233	3300028634	Activated Sludge	YPADEQSKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDDQIEEVR
Ga0302240_10220791	3300028638	Activated Sludge	AHEQAKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT
Ga0302240_10504801	3300028638	Activated Sludge	MNTRHRRKRLYPAEEQAKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT
Ga0302238_10247567	3300028644	Activated Sludge	MNTRHRRKRMYPAHEQAKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDKEMT
Ga0307350_1101931	3300028757	Anaerobic Digestor Sludge	SKRDEYFRDIGLLKMDEKRLRQKRNFELWCEGRDKEMT
Ga0265297_106746963	3300029288	Landfill Leachate	MEVEMNTRHRRKRMYPADEQAKRDEYFRDIGLLKMDERRLRQKRNFELWCEGRDNEIEEV
Ga0311022_110317632	3300029799	Anaerobic Digester Digestate	LPNRNKTVVPRGVAFMNTRHRRKRLYPADEQAKRDEYFRDIGLLKMDERRLRQKRNFELWCEGREKEMT
Ga0311022_119198273	3300029799	Anaerobic Digester Digestate	MNTRHRRKRMYPTHEQAKRDEYFREVGQIKMDERRLKQKRNFELWCEGRDNEIEDVR
Ga0311022_122788421	3300029799	Anaerobic Digester Digestate	VAFMNTRHRRKCLYPADEQRKRDEYFRDIGLLKMDESRLRQKRNFELWCEGRDKEMT
Ga0311022_131392871	3300029799	Anaerobic Digester Digestate	PADEQSKRDEYFRDIGLLKMDERRLRQKRNFELWCEGREKEMT
Ga0311022_162365794	3300029799	Anaerobic Digester Digestate	DEYFRDIGLLKMDERRLRQKRNFELWCEGRDNEIEEVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters