Metagenome / Metatranscriptome Family F084138

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084138
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	67 residues
Representative Sequence	MANQVTVLEEIIGDVAIALYQKWYNAMPQEEKNEVAEEALKKNAQETTLFVIQMFMDKFNQAAEELKNQD
Number of Associated Samples	80
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	71.43 %
% of genes near scaffold ends (potentially truncated)	33.04 %
% of genes from short scaffolds (< 2000 bps)	61.61 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.821 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater (23.214 % of family members)
Environment Ontology (ENVO)	Unclassified (27.679 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (56.250 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.20% β-sheet: 0.00% Coil/Unstructured: 39.80%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.128.1.0: automated matches	d3lsna1	3lsn	0.74725
c.124.1.5: IF2B-like	d2a0ua1	2a0u	0.71072
f.21.2.1: Fumarate reductase respiratory complex cytochrome b subunit, FrdC	d2bs2c_	2bs2	0.70176
c.124.1.5: IF2B-like	d1t5oa1	1t5o	0.68852
a.211.1.1: HD domain	d2cqza_	2cqz	0.67703

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00082	Peptidase_S8	42.86
PF00085	Thioredoxin	25.00
PF02467	Whib	4.46
PF13640	2OG-FeII_Oxy_3	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.82 %
All Organisms	root	All Organisms	40.18 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.82 %
cellular organisms	root	All Organisms → cellular organisms	38.39 %
Viruses	superkingdom	All Organisms → Viruses	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.82 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.39 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.82 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	16.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.50 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.82 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	16.07 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	12.50 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.82 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	12.50 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.71 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.82 %
Methylophilaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae	12.50 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	1.79 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.82 %
unclassified Methylophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae	12.50 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.79 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.82 %
Methylophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	12.50 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1.79 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001838\|RCM33_1039803	Not Available	526	Open in IMG/M
3300001968\|GOS2236_1066452	Not Available	1445	Open in IMG/M
3300003411\|JGI25911J50253_10106761	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300005527\|Ga0068876_10003669	Not Available	10936	Open in IMG/M
3300005527\|Ga0068876_10024274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	3808	Open in IMG/M
3300005581\|Ga0049081_10173500	Not Available	782	Open in IMG/M
3300005583\|Ga0049085_10100016	Not Available	1002	Open in IMG/M
3300005805\|Ga0079957_1004339	Not Available	11788	Open in IMG/M
3300005805\|Ga0079957_1020028	Not Available	4703	Open in IMG/M
3300005805\|Ga0079957_1176391	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300006030\|Ga0075470_10016243	Not Available	2302	Open in IMG/M
3300006641\|Ga0075471_10218129	Not Available	989	Open in IMG/M
3300006802\|Ga0070749_10066931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2159	Open in IMG/M
3300007169\|Ga0102976_1032755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2431	Open in IMG/M
3300007169\|Ga0102976_1111927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1021	Open in IMG/M
3300007169\|Ga0102976_1148691	Not Available	1081	Open in IMG/M
3300007169\|Ga0102976_1148692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1138	Open in IMG/M
3300007171\|Ga0102977_1039334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1424	Open in IMG/M
3300007177\|Ga0102978_1091724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	3436	Open in IMG/M
3300007177\|Ga0102978_1283922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1087	Open in IMG/M
3300007538\|Ga0099851_1134503	Not Available	928	Open in IMG/M
3300007541\|Ga0099848_1015772	All Organisms → cellular organisms → Bacteria	3270	Open in IMG/M
3300008107\|Ga0114340_1003321	Not Available	11579	Open in IMG/M
3300008116\|Ga0114350_1002080	Not Available	14792	Open in IMG/M
3300008116\|Ga0114350_1010845	Not Available	4083	Open in IMG/M
3300008116\|Ga0114350_1044212	All Organisms → cellular organisms → Bacteria	2111	Open in IMG/M
3300008117\|Ga0114351_1206909	Not Available	1018	Open in IMG/M
3300008120\|Ga0114355_1147626	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1416	Open in IMG/M
3300010354\|Ga0129333_10041494	Not Available	4328	Open in IMG/M
3300010354\|Ga0129333_10104218	All Organisms → cellular organisms → Bacteria	2620	Open in IMG/M
3300010354\|Ga0129333_10181721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1919	Open in IMG/M
3300010354\|Ga0129333_10641448	Not Available	918	Open in IMG/M
3300010354\|Ga0129333_11082501	Not Available	670	Open in IMG/M
3300010354\|Ga0129333_11279780	Not Available	607	Open in IMG/M
3300010370\|Ga0129336_10332168	Not Available	839	Open in IMG/M
3300010370\|Ga0129336_10414720	Not Available	734	Open in IMG/M
3300010370\|Ga0129336_10420409	Not Available	728	Open in IMG/M
3300010370\|Ga0129336_10664411	Not Available	553	Open in IMG/M
3300010370\|Ga0129336_10709329	Not Available	532	Open in IMG/M
3300011268\|Ga0151620_1017878	Not Available	2485	Open in IMG/M
3300012012\|Ga0153799_1002841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	4584	Open in IMG/M
3300012017\|Ga0153801_1076464	Not Available	588	Open in IMG/M
3300012968\|Ga0129337_1128758	Not Available	1479	Open in IMG/M
3300012968\|Ga0129337_1196349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1085	Open in IMG/M
3300013087\|Ga0163212_1235474	Not Available	569	Open in IMG/M
(restricted) 3300013126\|Ga0172367_10095001	All Organisms → cellular organisms → Bacteria	2118	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10029015	Not Available	5402	Open in IMG/M
(restricted) 3300013131\|Ga0172373_10109462	Not Available	2062	Open in IMG/M
(restricted) 3300013137\|Ga0172375_10093567	All Organisms → cellular organisms → Bacteria	2639	Open in IMG/M
3300013372\|Ga0177922_10067180	Not Available	8309	Open in IMG/M
3300020074\|Ga0194113_10180317	All Organisms → cellular organisms → Bacteria	1716	Open in IMG/M
3300020159\|Ga0211734_10079109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	5087	Open in IMG/M
3300020183\|Ga0194115_10024030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	4578	Open in IMG/M
3300020183\|Ga0194115_10359978	Not Available	640	Open in IMG/M
3300020220\|Ga0194119_10583660	Not Available	691	Open in IMG/M
3300021519\|Ga0194048_10040458	Not Available	1918	Open in IMG/M
3300021602\|Ga0194060_10031664	Not Available	3206	Open in IMG/M
3300021961\|Ga0222714_10062378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	2512	Open in IMG/M
3300021961\|Ga0222714_10243637	Not Available	1012	Open in IMG/M
3300021962\|Ga0222713_10047286	Not Available	3313	Open in IMG/M
3300022198\|Ga0196905_1112051	Not Available	720	Open in IMG/M
3300022752\|Ga0214917_10005014	Not Available	14306	Open in IMG/M
3300022752\|Ga0214917_10142269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1286	Open in IMG/M
3300024277\|Ga0255207_1010392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1627	Open in IMG/M
3300024289\|Ga0255147_1014334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1702	Open in IMG/M
3300024289\|Ga0255147_1053193	Not Available	784	Open in IMG/M
3300024306\|Ga0255148_1082948	Not Available	548	Open in IMG/M
3300024346\|Ga0244775_10057928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	3353	Open in IMG/M
3300024352\|Ga0255142_1033330	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	810	Open in IMG/M
3300024481\|Ga0256330_1005557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2462	Open in IMG/M
3300024484\|Ga0256332_1005240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2515	Open in IMG/M
3300024484\|Ga0256332_1014018	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1654	Open in IMG/M
3300024492\|Ga0255189_1051849	Not Available	537	Open in IMG/M
3300024506\|Ga0255168_1077982	Not Available	519	Open in IMG/M
3300024507\|Ga0255176_1006725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2458	Open in IMG/M
3300024509\|Ga0255175_1061589	Not Available	688	Open in IMG/M
3300024513\|Ga0255144_1044661	Not Available	748	Open in IMG/M
3300024514\|Ga0255177_1025175	Not Available	1071	Open in IMG/M
3300024515\|Ga0255183_1100756	Not Available	567	Open in IMG/M
3300024556\|Ga0256341_1091694	Not Available	603	Open in IMG/M
3300024562\|Ga0256336_1031355	Not Available	1151	Open in IMG/M
3300024573\|Ga0256337_1022115	Not Available	1585	Open in IMG/M
3300024866\|Ga0255272_1100089	Not Available	725	Open in IMG/M
3300025283\|Ga0208048_1119503	Not Available	540	Open in IMG/M
3300025585\|Ga0208546_1011700	All Organisms → cellular organisms → Bacteria	2302	Open in IMG/M
3300025872\|Ga0208783_10295521	Not Available	645	Open in IMG/M
3300025889\|Ga0208644_1064550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1951	Open in IMG/M
3300026455\|Ga0255155_1005695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2299	Open in IMG/M
3300026566\|Ga0256334_1025465	Not Available	1335	Open in IMG/M
3300026571\|Ga0255289_1029317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1245	Open in IMG/M
3300026573\|Ga0255269_1011258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2398	Open in IMG/M
3300026573\|Ga0255269_1025268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1642	Open in IMG/M
3300027306\|Ga0255220_1043592	Not Available	859	Open in IMG/M
3300027586\|Ga0208966_1118433	Not Available	717	Open in IMG/M
3300027631\|Ga0208133_1031764	Not Available	1319	Open in IMG/M
3300027659\|Ga0208975_1112652	Not Available	782	Open in IMG/M
3300027793\|Ga0209972_10011280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	5953	Open in IMG/M
3300027793\|Ga0209972_10162875	Not Available	1060	Open in IMG/M
3300028286\|Ga0256331_1001599	All Organisms → cellular organisms → Bacteria	3985	Open in IMG/M
3300029933\|Ga0119945_1002603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2638	Open in IMG/M
3300031758\|Ga0315907_10101581	All Organisms → cellular organisms → Bacteria	2464	Open in IMG/M
3300031758\|Ga0315907_10472212	Not Available	998	Open in IMG/M
3300031758\|Ga0315907_10765245	Not Available	726	Open in IMG/M
3300031857\|Ga0315909_10133802	Not Available	2072	Open in IMG/M
3300031857\|Ga0315909_10149927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Methylophilaceae → unclassified Methylophilaceae → Methylophilaceae bacterium	1922	Open in IMG/M
3300031951\|Ga0315904_10063495	Not Available	4045	Open in IMG/M
3300033981\|Ga0334982_0142218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1229	Open in IMG/M
3300034019\|Ga0334998_0323583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	908	Open in IMG/M
3300034073\|Ga0310130_0000193	Not Available	50595	Open in IMG/M
3300034073\|Ga0310130_0001709	Not Available	11351	Open in IMG/M
3300034073\|Ga0310130_0069091	Not Available	1050	Open in IMG/M
3300034095\|Ga0335022_0316681	Not Available	877	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	97.32%
Terrestrial	Environmental → Terrestrial	2.68%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	72.32%
Marine	Environmental → Aquatic → Marine	25.00%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.68%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	32.14%
River	Environmental → Aquatic → Freshwater → River	23.21%
Coastal	Environmental → Aquatic → Marine → Coastal	19.64%
Lentic	Environmental → Aquatic → Freshwater → Lentic	8.93%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	5.36%
Unclassified	Environmental → Aquatic → Marine → Unclassified	4.46%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.68%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.79%
Drinking Water	Environmental → Aquatic → Freshwater → Drinking Water	0.89%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	32.14%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	23.21%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	19.64%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	8.93%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	5.36%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	4.46%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	23.21%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	9.82%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	9.82%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	9.82%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	8.93%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	5.36%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	5.36%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	4.46%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	3.57%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.57%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	2.68%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.68%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	2.68%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	1.79%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.79%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.89%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	0.89%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.89%
Aquatic	Environmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic	0.89%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001838	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM33, ROCA_DNA217_0.2um_bLM_C_2a	Environmental	Open in IMG/M
3300001968	Marine microbial communities from Lake Gatun, Panama - GS020	Environmental	Open in IMG/M
3300003411	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300005583	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006030	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300007169	Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Bottom layer) 8 sequencing projects	Environmental	Open in IMG/M
3300007171	Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Surface layer) 8 sequencing projects	Environmental	Open in IMG/M
3300007177	Combined Assembly of cyanobacterial bloom in Marina Bay water reservoir, Singapore (Diel cycle-Surface and Bottom layers) 16 sequencing projects	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008116	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NA	Environmental	Open in IMG/M
3300008117	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NA	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental	Open in IMG/M
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental	Open in IMG/M
3300012017	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1m	Environmental	Open in IMG/M
3300012968	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013087	Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30L	Environmental	Open in IMG/M
3300013126 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10m	Environmental	Open in IMG/M
3300013131 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10m	Environmental	Open in IMG/M
3300013137 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_11.1m	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300020074	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015017 Mahale Deep Cast 200m	Environmental	Open in IMG/M
3300020159	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1	Environmental	Open in IMG/M
3300020183	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015002 Mahale S4 surface	Environmental	Open in IMG/M
3300020220	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015018 Mahale Deep Cast 100m	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300021602	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5m	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022198	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300024277	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Miss_RepA_8d	Environmental	Open in IMG/M
3300024289	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepA_8h	Environmental	Open in IMG/M
3300024306	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepB_8h	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300024352	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepB_0h	Environmental	Open in IMG/M
3300024481	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepC_0h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024484	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024492	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Cont_RepC_8h	Environmental	Open in IMG/M
3300024506	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepB_8d	Environmental	Open in IMG/M
3300024507	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepA_8d	Environmental	Open in IMG/M
3300024509	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepC_8d	Environmental	Open in IMG/M
3300024513	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_8h	Environmental	Open in IMG/M
3300024514	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepB_8d	Environmental	Open in IMG/M
3300024515	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepB_8d	Environmental	Open in IMG/M
3300024556	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepB_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024562	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepC_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024573	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024866	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atlam_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025283	Freshwater microbial communities from Lake Malawi, Central Region, Malawi to study Microbial Dark Matter (Phase II) - Malawi_45m_30L (SPAdes)	Environmental	Open in IMG/M
3300025585	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025872	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300026455	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Atl_RepC_8h	Environmental	Open in IMG/M
3300026566	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026571	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepB_8d (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026573	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepC_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027306	Freshwater microbial communities from Mississippi River, Louisiana, United States - Miss_Colum_RepB_8d	Environmental	Open in IMG/M
3300027586	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)	Environmental	Open in IMG/M
3300027631	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535 (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027793	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300028286	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029933	Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727_2	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300034019	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Sep2014-rr0049	Environmental	Open in IMG/M
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental	Open in IMG/M
3300034095	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Feb2014D0-rr0091	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
RCM33_10398032	3300001838	Marine Plankton	MADKITVLEEIIVHVGTALYQKWYNALPEDQRNEDHLKAMAKNANETSFFVIQMFMDKFNQAAEELKNS*
GOS2236_10664523	3300001968	Marine	MTKQVTILEEIIGDVAIALYQKWYNAMPIEDRNELAEEALKKNAQESTLFVIQMFMDKFNEAAEELKNQD*
JGI25911J50253_101067613	3300003411	Freshwater Lake	TVLEEIIKEISEELYQKWYNAPTDVEKTKEWSEIMAKNAGETTFFIIQSFMNKFNAAAEELKDK*
Ga0068876_1000366919	3300005527	Freshwater Lake	MANNVTVLEGIIGDVAIALYQKWYNAMPVEEKNELAEEALKKNAQETTLFIIQMFMDKFNQAAEELKNQD*
Ga0068876_100242749	3300005527	Freshwater Lake	MANNVTVLEGIIGDVAIALYQKWYNAMPAEEKNEVAEEALKKNAQETTLFVIQMFMDKFNQAAEELKNQD*
Ga0049081_101735002	3300005581	Freshwater Lentic	MANNVTVLEGIIEDVAVALYQKWYNAIPSGRVSEDSEEALALNKNAKEVTLFVIQMFMDKFNEEAERLKNED*
Ga0049085_101000161	3300005583	Freshwater Lentic	MADLTVLDEIIQQVSAELYQKWYNAPTDLEKTNEWSEVMAKNAGETTFFVIQSFMNKFNAAAEELKDL*
Ga0079957_100433920	3300005805	Lake	MANQVTILEEIIGDVAIALYQKWYNAMPQDEKNESSESALKKNAQETTLFIIQMFMDKFNKAAEELKNQD*
Ga0079957_10200285	3300005805	Lake	MANNVTVLEGIIEDVAVALYQKWYNAIPSGRVNEDSEEALALNKNAKEVTLFVIQMFMDKFNEEAERLKNEG*
Ga0079957_11763912	3300005805	Lake	MANQVTVLEGIIGDVAIALYQKWYNAMPIEERNELAEEALKKNAQETTLFVIQMFMDKFNQAAEELKNQD*
Ga0075470_100162432	3300006030	Aqueous	MANQVTVLEAIIGDVAIALYQKWYNAMPIEERSELAEEALKKNAQESTLFVIQMFMDKFNEAAEELKNQD*
Ga0075471_102181292	3300006641	Aqueous	MANQVTVLEEIIGDVAIALYQRWYNAMPAEEKNELAEEALKKNAQETTLFVIQMFMDKFNQAAEELKNQD*
Ga0070749_100669311	3300006802	Aqueous	MDKQVTVLESIIGDVAVALYQQWYNALPIEERTEDAIAGLKRNSEEVTFFVIQMFMNKFNEAAEELKNKD*
Ga0102976_10327556	3300007169	Freshwater Lake	MANQVTILEEIIGDVAIALYQKWYNAMPVEERSELAEQALKKNAQESSLFVIQMFMDKFNEAAEELKNQD*
Ga0102976_11119272	3300007169	Freshwater Lake	MANQVTILESIIGDVAIALYQKWYNAMPVEERSELAEEALKKNAQESTLFVIQMFMDKFNQAAEELKNQG*
Ga0102976_11486912	3300007169	Freshwater Lake	MANQVTVLEGIIGDVAIALYQKWYNAMPLEERNEMAEAALKKNAQESTLFIIQMFMDKF
Ga0102976_11486922	3300007169	Freshwater Lake	MANQVTVLEGIIGDVAIALYQKWYNAMPLEERNEMAEAALKKNAQESTLFVIQMFMDKFNQAAEELKNQD*
Ga0102977_10393343	3300007171	Freshwater Lake	MANQVTVLEGIIGDVAIALYQKWYNAMPAEEKNEMAEEALKKNAQKTTLFVIQMFMDKFNQAAEELKNQD*
Ga0102978_109172410	3300007177	Freshwater Lake	MANQVTVLEGIIGDVAIALYQKWYNAMPAEEKNEMAEEALKKNAQETTLFVIQMFMDKFNQAAEELKNQD*
Ga0102978_12839221	3300007177	Freshwater Lake	MANQVTVLEAIIGDVAIALYQKWYNAMPIEERSELAEEALKKNAQESTLFVIQMFMDKF
Ga0099851_11345032	3300007538	Aqueous	MGNNMTVLEEIIKEVSASLYQKWYNALPENEKNSESSEAMAKNAGETTFFVIQLFMQKFNDAAEELKSID*
Ga0099848_10157722	3300007541	Aqueous	MANQVTILEGIIGDVAVALYQKWYNAMPIEERNELAEEALKKNAQESTLFVIQMFMDKFNEAAEELKNKD*
Ga0114340_100332120	3300008107	Freshwater, Plankton	MANLTVLEEIVKEVSSELYQKWYNAMPEEEKNEMSSEALMKNAGETTFFVIQTFMNKFNQAAEELKDKPE*
Ga0114350_10020805	3300008116	Freshwater, Plankton	MAKQVTILEEIIGDVAIALYQKWYNAMPAEERNEIAEEALKKNAQESALFVIQMFMDKFNQAAEELKDQD*
Ga0114350_10108455	3300008116	Freshwater, Plankton	VANQVTVLEGIIGDVAIALYQKWYNAMPIEERNEVSEAALKKNAQETAFFVIQMFMDKFNQAAEELKNQD*
Ga0114350_10442124	3300008116	Freshwater, Plankton	MANQVTILEEIIGDVAIALYQKWYNAMPAEEKNQVAEEALKKNAQETTLFVIQMFMDRFNQAAEELKNQD*
Ga0114351_12069091	3300008117	Freshwater, Plankton	DVAIALYQKWYNAMPIEERSELAEEALKKNAQESTLFVIQMFMDKFNEAAEELKNQD*
Ga0114355_11476262	3300008120	Freshwater, Plankton	MDKQMTVLDQIIAEVSAGLYQRWYNAMPEEEKNPIASQALQANARETTLFVIQMFMDKFNQAAEELKDS*
Ga0129333_100414949	3300010354	Freshwater To Marine Saline Gradient	MANQVTVLEGIIGDVAIALYQKWYNAMPIEERDELAEQALKKNAQESTLFVIQMFMDKFNEAAEELKDKD*
Ga0129333_101042183	3300010354	Freshwater To Marine Saline Gradient	MANNVTVLEGIIGDVAIALYQKWYNAMPGEEKNEVAEEALKKNAQETTLFVIQMFMDKFNQAAEELKNQD*
Ga0129333_101817211	3300010354	Freshwater To Marine Saline Gradient	MANQVTVLEQIIGDVAVALYQKWYNAMPQEEKNELAEEALKKNAQETTLFVIQMFMDKFNQAAEELKNQD*
Ga0129333_106414482	3300010354	Freshwater To Marine Saline Gradient	MANQVTVLEEIIGDVAIALYQKWYNAMPQEEKNEVAEEALKKNAQETTLFVIQMFMDKFNQAAEELKNQD*
Ga0129333_110825012	3300010354	Freshwater To Marine Saline Gradient	DVAVALYQQWYNALPIEERTEDAIAGLKRNSEEVTFFVIQMFMNKFNEAAEELKNKD*
Ga0129333_112797801	3300010354	Freshwater To Marine Saline Gradient	MANQVTVLEGIIGDVAIALYQKWYNAMPAEEKNKMAEEALKKNAQETTLFVIQMFMDKFNQAAEELKNQD*
Ga0129336_103321681	3300010370	Freshwater To Marine Saline Gradient	MANQVTVLEEIIGDVAIALYQKWYNAMPAEEKNELAEEALKKNAQETTLFVIQMFMDKFNQA
Ga0129336_104147202	3300010370	Freshwater To Marine Saline Gradient	MANQVTVLEQIIGDVAVALYQKWYNAMPQEEKNEVAEEALKKNAQETTLFVIQMFMDKFNQAAEELKNQD*
Ga0129336_104204091	3300010370	Freshwater To Marine Saline Gradient	MANLTVLEEIVKEVSSELYQKWYNAMPEEEKNEMSSEALMKNAGETTFFVIQTFMNK
Ga0129336_106644112	3300010370	Freshwater To Marine Saline Gradient	MANQVTILEGIVGDVAVALYQKWYNAMPIEERNELAEEALKKNAQESTLFVIQMFMDKFNEAAEESKDKD*
Ga0129336_107093291	3300010370	Freshwater To Marine Saline Gradient	MANQVTVLEGIIGDVAIALYQKWYNAMPIEERNELAEEALKKNAQETTLFVIQMFMDKFNQAAEE
Ga0151620_10178783	3300011268	Freshwater	MSNLTVLEEIVKEVSSELYQKWYNAMPEEEKNEMSSEALMKNAGETTFFVIQTFMNKFNQAAEELKDKPE*
Ga0153799_100284112	3300012012	Freshwater	MANQVTILEEIIGDVAIALYQKWYNAMPQDEKNESSEAALKKNAQETTLFIIQMFMDKFNKAAEDLKNQD*
Ga0153801_10764642	3300012017	Freshwater	MANNVTVLEGIIEDVAVALYQKWYNAIPSGRISEDSEEALALNKNAKEVTLFVIQMFMDKFNEEAERLKNED*
Ga0129337_11287582	3300012968	Aqueous	MANQVTVLEEIIGDVAIALYQKWYNAMPQEEKNEMAEAALKKNAQETTLFVIQMFMDKFNQAAEELKNQD*
Ga0129337_11963491	3300012968	Aqueous	MANQVTVLEAIIGDVAIALYQKWYNAMPIEERSELAEEALKKNAQESTLFVIQMFMDKFNEA
Ga0163212_12354742	3300013087	Freshwater	LEEIIGDVAIALYQKWYNAMPVEENNGVAEEALKKNAQETTLFVIQMFMDKFNQAAEQLKNQD*
(restricted) Ga0172367_100950015	3300013126	Freshwater	MANNVTVLEGIIEDVAVALYQKWYNAIPLGKINEDSEQALVLKKNAQEITLFVIQMFMDKFNEEAEILKNQD*
(restricted) Ga0172373_100290155	3300013131	Freshwater	MTNQVTVLEGIIGDVAIALYQKWYNAMPAEERNEMAEEALKKNAQETTLFIIQMFMDKFNQAAEELKNQD*
(restricted) Ga0172373_101094623	3300013131	Freshwater	MANQVTVLEEIIGDVATALYQKWYNAMLAEEKNEVAEEALKKNAQETTLFVIQMFMDKFNQAAEELKG*
(restricted) Ga0172375_100935676	3300013137	Freshwater	VLEGIIEDVAVALYQKWYNAIPLVKINEDSEQALVLKKNAQEITLFVIQMFMDKFNEEAEILKNQD*
Ga0177922_100671805	3300013372	Freshwater	MANQVTILEEIIGDVAIALYQKWYNAMPQDEKNESSEAALKKNAQETTLFIIQMFMDKFNKAAEELKNQD*
Ga0194113_101803175	3300020074	Freshwater Lake	MANQVTVLEEIVGDVAIALYQKWYNAMPAEENNEVAEKALKKNAQETTLFVIQMFMDKFNQAAEELKNQD
Ga0211734_100791094	3300020159	Freshwater	MANMTVLEEIVKEVSSELYQKWYNAIPNEEKNEKSSEALMKNAGETTFFVIQAFMNKFNEAAEELKDK
Ga0194115_1002403011	3300020183	Freshwater Lake	MANQVTVLEEIVGDVAIALYQKWYNAMPAEENNEVAEKALKKNAQETTLFVIQMFMDKFNQAAEELKNKD
Ga0194115_103599782	3300020183	Freshwater Lake	MANNVTVLEGIIEDVAVALYQKWYNAIPLGKINEDSEHALALKKNAQEITLFVIQMFMDKFNEEAERLKNQD
Ga0194119_105836602	3300020220	Freshwater Lake	MANQVTVLEEIIGDVAIALYQKWYNAMPAEENNEVAEKALKKNAQETTLFVIQMFMDKFNQAAEELKNKD
Ga0194048_100404583	3300021519	Anoxic Zone Freshwater	MDDKTTILEGIIGDVAAALYQKWYNALPDEEKTDDSSKALGLNAKETTFFVVQMFMNKFNEAAEELKDN
Ga0194060_100316648	3300021602	Anoxic Zone Freshwater	IIGDVAAALYQKWYNALPDEEKTDDSSKALGLNAKETTFFVVQMFMNKFNEAAEELKDN
Ga0222714_100623782	3300021961	Estuarine Water	MANNVTVLEGIIEDVAVALYQKWYNAIPSGRVSEDSEEALVLKKNAQEITLFVIQMFMDKFNEEAERLKNED
Ga0222714_102436372	3300021961	Estuarine Water	MSNLTVLEEIVKEVSSELYQKWYNAMPEEEKNEMSSEALMKNAGETTFFVIQTFMNKFNQAAEELKDKPE
Ga0222713_100472865	3300021962	Estuarine Water	MANNVTVLEGIIEDVAVALYQKWYNAIPSGRVSEDSEEAIALNKNAKEVTLFVIQMFMDKFNEEAERLKKEG
Ga0196905_11120511	3300022198	Aqueous	GNNMTVLEEIIKEVSASLYQKWYNALPENEKNSESSEAMAKNAGETTFFVIQLFMQKFNDAAEELKSID
Ga0214917_1000501415	3300022752	Freshwater	MANQVTILEEIIGDVAIALYQKWYNAMPVDERSELAEQALKKNAQESALFVIQMFMDKFNEAAEELKNQD
Ga0214917_101422694	3300022752	Freshwater	DVAIALYQKWYNAMPQEEKNEIAEEALKKNAQETTLFVIQMFMDKFNQAAEELKNQD
Ga0255207_10103924	3300024277	Freshwater	MANNVTVLEGIIEDVAVALYQKWYNAIPSGRVSEDSEEALVLKKNAQEITLFVIQMFMDKFNEEA
Ga0255147_10143345	3300024289	Freshwater	VLEEIIGDVAIALYQKWYNAMPQEEKNEVAEEALKKNAQETTLFVIQMFMDKFNQAAEELKNQD
Ga0255147_10531932	3300024289	Freshwater	MANQVTVLEGIIGDVAIALYQKWYNAMPTEEKNELAEEALKKNAQETTLFVIQMFMDKFNQAAEELKNQD
Ga0255148_10829481	3300024306	Freshwater	MTNQVTVLEEIIGDVAIALYQKWYNAMPQEEKNEVAEEALKKNAQETTLFVIQMFMDKFNQAAEELKNQD
Ga0244775_100579289	3300024346	Estuarine	MADLTVLDEIIQQVSAELYQKWYNAPTDLEKTNEWSEVMAKNAGETTFFVIQSFMNKFNAAAEELKDL
Ga0255142_10333302	3300024352	Freshwater	MANQVTILEEIIGDVAIALYQKWYNAMPVDERSELAEEALKKNAQESALFVIQMFMDKFNEAAEELKNQD
Ga0256330_10055571	3300024481	Freshwater	GDVAIALYQKWYNAMPLEERNEMAEAALKKNAQESTLFVIQMFMDKFNQAAEELKNQD
Ga0256332_10052402	3300024484	Freshwater	MTNQVTVLEEIIGDVAIALYQKWYNAMPQEEKNEVAEKALKKNAQETTLFVIQMFMDKFNQAAEELKNQD
Ga0256332_10140184	3300024484	Freshwater	MANQVTVLEGIIGDVAIALYQKWYNAMPLEERNEMAEAALKKNAQESTLFVIQMFMDKFN
Ga0255189_10518492	3300024492	Freshwater	YVAVALYQKWYNAIPSGRVSEDSEEALVLKKNAQEITLFVIQMFMDKFNEEAERLKNED
Ga0255168_10779821	3300024506	Freshwater	DVAIALYQKWYNAMPQEEKNEVAEEALKKNAQETTLFVIQMFMDKFNQAAEELKNQD
Ga0255176_10067251	3300024507	Freshwater	EIIGDVAIALYQKWYNAMPQEEKNEIAEEALKKNAQETTLFVIQMFMDKFNQAAEELKNQ
Ga0255175_10615891	3300024509	Freshwater	MANQVTVLEEIIGDVAIALYQKWYNAMPQEEKNEVAEEALKKNAQETTLFVIQMFMDK
Ga0255144_10446612	3300024513	Freshwater	MANKVTVLEGIIGDVAIALYQKWYNAMPTEEKNELAEEALKKNAQETTLFVIQMFMDKFNQAAEELKNED
Ga0255177_10251752	3300024514	Freshwater	MANQVTVLEEIIGDVAIALYQKWYNAMPQEEKNEIAEEALKKNAQETTLFVIQMFMDKFNQAAEELKNQD
Ga0255183_11007561	3300024515	Freshwater	MANQVTVLEEIIGDVAIALYQKWYNAMPQEEKNEVAEEALKKNAQETTLFVIQMFMDKFNQAAEELK
Ga0256341_10916942	3300024556	Freshwater	MANQVTVLEGIIGDVAIALYQKWYNAMPLEERNEMAEAALKKNAQESTLFVIQMFMDKFNQAAEELKN
Ga0256336_10313551	3300024562	Freshwater	MANQVTVLEEIIGDVAIALYQKWYNAMPQEEKNEVAEKALKKNAQETTLFVIQMFMDKFNQAAEELKNQD
Ga0256337_10221154	3300024573	Freshwater	MANQVTVLEEIIGDVAIALYQKWYNAMPQEEKNEVAEEALKKNAQETTLFVIQMFMDKFNQAAEELKN
Ga0255272_11000892	3300024866	Freshwater	GDVAIALYQKWYNAMPQEEKNEVAEEALKKNAQETTLFVIQMFMDKFNQAAEELKNQD
Ga0208048_11195032	3300025283	Freshwater	MANQVTVLEEIIGDVAIALYQKWYNAMPVEENNGVAEEALKKNAQETTLFVIQMFMDKFNQAAEQLKNQD
Ga0208546_10117002	3300025585	Aqueous	MANQVTVLEAIIGDVAIALYQKWYNAMPIEERSELAEEALKKNAQESTLFVIQMFMDKFNEAAEELKNQD
Ga0208783_102955212	3300025872	Aqueous	MANQVTVLEEIIGDVAIALYQRWYNAMPAEEKNELAEEALKKNAQETTLFVIQMFMDKFNQAAEELKNQD
Ga0208644_10645501	3300025889	Aqueous	MDKQVTVLESIIGDVAVALYQQWYNALPIEERTEDAIAGLKRNSEEVTFFVIQMFMNKFNEAAEELKN
Ga0255155_10056951	3300026455	Freshwater	MANQVTVLEEIIGDVAIALYQKWYNAMPQEEKNEIAEEALKKNTQETTLFVIQMFMDKFNQAAEELKNQD
Ga0256334_10254652	3300026566	Freshwater	MTNQVTVLEEIIGDVAIALYQKWYNAMPQEEKNEIAEEALKKNAQETTLFVIQMFMDKFNQAAEELKNQD
Ga0255289_10293173	3300026571	Freshwater	MANQVTVLEGIIGDVAIALYQKWYNAMPLEERNEMAEAALKKNAQESTLFVIQMFMDKFNQAA
Ga0255269_10112581	3300026573	Freshwater	IGDVAIALYQKWYNAMPQEEKNEIAEEALKKNAQETTLFVIQMFMDKFNQAAEELKNQD
Ga0255269_10252681	3300026573	Freshwater	MTVLEGIVEDVAIALYQKWYNAVPQDQINEEHSKSLEKNARDTTLFVIQLFMDKFNQA
Ga0255220_10435922	3300027306	Freshwater	MANNVTVLEGIIEDVAVALYQKWYNAIPSGRVSEDSEEALALNKNAKEVTLFVIQMFMDKFNEEAERLKNED
Ga0208966_11184331	3300027586	Freshwater Lentic	VLDEIIQQVSAELYQKWYNAPTDLEKTSEWSEVMAKNAGETTFFVIQSFMNKFNAAAEELKDL
Ga0208133_10317641	3300027631	Estuarine	LTVLDEIIQQVSAELYQKWYNAPTDLEKTNEWSEVMAKNAGETTFFVIQSFMNKFNAAAEELKDL
Ga0208975_11126521	3300027659	Freshwater Lentic	MANNVTVLEGIIEDVAVALYQKWYNAIPSGRISEDSEEALALNKNAKEVTLFVIQMFMDKFNEEAERLKNED
Ga0209972_1001128012	3300027793	Freshwater Lake	MANNVTVLEGIIGDVAIALYQKWYNAMPVEEKNELAEEALKKNAQETTLFIIQMFMDKFNQAAEELKNQD
Ga0209972_101628752	3300027793	Freshwater Lake	MANNVTVLEGIIGDVAIALYQKWYNAMPAEEKNEVAEEALKKNAQETTLFVIQMFMDKFNQAAEELKNQD
Ga0256331_10015994	3300028286	Freshwater	MANQVTVLEGIIGDVAIALYQKWYNAMPLEERNEMAEAALKKNAQESTLFVIQMFMDKFNQAAEELENQDYY
Ga0119945_10026034	3300029933	Aquatic	MANNVTVLEGIIEDVAVALYQKWYNAMPVEEKNELAEEALKKNAQETTLFVIQMFMDKFNEEAERLKNED
Ga0315907_101015815	3300031758	Freshwater	MANQVTILEEIIGDVAIALYQKWYNAMPAEEKNQVAEEALKKNAQETTLFVIQMFMDRFNQAAEELKNQD
Ga0315907_104722122	3300031758	Freshwater	MAKQVTILEEIIGDVAIALYQKWYNAMPAEERNEIAEEALKKNAQESALFVIQMFMDKFNQAAEELKDQD
Ga0315907_107652452	3300031758	Freshwater	VANQVTVLEGIIGDVAIALYQKWYNAMPIEERNEVSEAALKKNAQETAFFVIQMFMDKFNQAAEELKNQD
Ga0315909_101338021	3300031857	Freshwater	MANLTVLEEIVKEVSSELYQKWYNAMPEEEKNEMSSEALMKNAGETTFFVIQTFMNKFNQAAEELKDKPE
Ga0315909_101499275	3300031857	Freshwater	MAKQVTILEEIIGDVAIALYQKWYNAMPAEERNEIAEEALKKNAQESALFVIQMFMD
Ga0315904_100634956	3300031951	Freshwater	MDKQMTVLDQIIAEVSAGLYQRWYNAMPEEEKNPIASQALQANARETTLFVIQMFMDKFNQAAEELKDS
Ga0334982_0142218_1049_1228	3300033981	Freshwater	VANQVTVLEGIIGDVAIALYQKWYNAMPIEERNEVSEAALKKNAQETAFFVIQMFMDKFN
Ga0334998_0323583_540_752	3300034019	Freshwater	VANQVTVLEGIIGDVAIALYQKWYNAMPTEERNEVSEAALKKNAQETAFFVIQMFMDKFNQAAEELKNQD
Ga0310130_0000193_38091_38303	3300034073	Fracking Water	MGNNMTVLEEIIKEVSASLYQKWYNALPENEKNSESSEAMAKNAGETTFFVIQLFMQKFNDAAEELKSID
Ga0310130_0001709_4061_4279	3300034073	Fracking Water	MANNVTVLEGIIEDVAVALYQKWYNAIPSGRVKEDSEEALVLKKNAQEITLFVIQMFMDKFNEEAERLKNED
Ga0310130_0069091_832_1041	3300034073	Fracking Water	MANQVTILEGIIGDVAVALYQKWYNAMPIEERNELAEEALKKNAQESTLFVIQMFMDKFNQAAEELKGI
Ga0335022_0316681_710_877	3300034095	Freshwater	MANMTVLEEIIKEVSSELYQKWYNAMPEEEKNEISSEALMKNAGETTFFVIQTFMN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters