Metagenome / Metatranscriptome Family F084134

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084134
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	95 residues
Representative Sequence	MKKQATKAAKRGRPAKKTIIIDESPCSLDSLIEQQIDDDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDYYEYAS
Number of Associated Samples	78
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	38.39 %
% of genes near scaffold ends (potentially truncated)	34.82 %
% of genes from short scaffolds (< 2000 bps)	68.75 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (41.071 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake (19.643 % of family members)
Environment Ontology (ENVO)	Unclassified (43.750 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (48.214 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.37% β-sheet: 40.00% Coil/Unstructured: 52.63%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF03237	Terminase_6N	10.71
PF01555	N6_N4_Mtase	2.68
PF01844	HNH	2.68
PF07484	Collar	0.89
PF03837	RecT	0.89
PF04404	ERF	0.89
PF13392	HNH_3	0.89
PF12684	DUF3799	0.89
PF14890	Intein_splicing	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0863	DNA modification methylase	Replication, recombination and repair [L]	2.68
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	2.68
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	2.68
COG3723	Recombinational DNA repair protein RecT	Replication, recombination and repair [L]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.93 %
Unclassified	root	N/A	41.07 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	56.25 %
Unclassified	root	N/A	41.07 %
cellular organisms	root	All Organisms → cellular organisms	2.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.07 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	31.25 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.11 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.79 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.07 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	31.25 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.11 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.89 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.07 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	31.25 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.11 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.89 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.07 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	31.25 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.11 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	0.89 %
Candidatus Aminicenantes	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.11 %
Methanotrichales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales	0.89 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	0.89 %
unclassified Aminicenantes	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.11 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.89 %
Candidatus Aminicenantes bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	0.89 %
Methanotrichaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.11 %
Methanothrix	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	0.89 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.89 %
Candidatus Aminicenantes bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.11 %
unclassified Methanothrix	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix	0.89 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.89 %
Candidatus Aminicenantes bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.07 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	24.11 %
Methanothrix sp.	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	0.89 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	0.89 %
Candidatus Aminicenantes bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002408\|B570J29032_109872732	Not Available	1838	Open in IMG/M
3300002835\|B570J40625_100001984	Not Available	37736	Open in IMG/M
3300002835\|B570J40625_101748248	Not Available	505	Open in IMG/M
3300003277\|JGI25908J49247_10007073	All Organisms → Viruses → Predicted Viral	3551	Open in IMG/M
3300003277\|JGI25908J49247_10051737	Not Available	1072	Open in IMG/M
3300003393\|JGI25909J50240_1036992	Not Available	1050	Open in IMG/M
3300003394\|JGI25907J50239_1086097	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	616	Open in IMG/M
3300003616\|JGI25928J51866_1009252	All Organisms → Viruses → Predicted Viral	2855	Open in IMG/M
3300004481\|Ga0069718_10090449	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Aminicenantes → unclassified Aminicenantes → Candidatus Aminicenantes bacterium	9495	Open in IMG/M
3300004481\|Ga0069718_16314792	All Organisms → Viruses → Predicted Viral	1471	Open in IMG/M
3300004781\|Ga0062379_10201030	Not Available	530	Open in IMG/M
3300005581\|Ga0049081_10000508	Not Available	14925	Open in IMG/M
3300005581\|Ga0049081_10003642	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5807	Open in IMG/M
3300006641\|Ga0075471_10352731	Not Available	743	Open in IMG/M
3300006805\|Ga0075464_10181110	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1247	Open in IMG/M
3300007538\|Ga0099851_1001913	Not Available	8760	Open in IMG/M
3300007593\|Ga0102918_1166887	Not Available	666	Open in IMG/M
3300007636\|Ga0102856_1001257	All Organisms → Viruses → Predicted Viral	3066	Open in IMG/M
3300007636\|Ga0102856_1070958	Not Available	567	Open in IMG/M
3300007647\|Ga0102855_1064199	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	991	Open in IMG/M
3300007708\|Ga0102859_1009340	All Organisms → Viruses → Predicted Viral	2404	Open in IMG/M
3300007708\|Ga0102859_1018473	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1800	Open in IMG/M
3300007708\|Ga0102859_1209747	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	580	Open in IMG/M
3300008107\|Ga0114340_1066901	All Organisms → Viruses → Predicted Viral	2028	Open in IMG/M
3300008267\|Ga0114364_1171511	Not Available	566	Open in IMG/M
3300008448\|Ga0114876_1023846	All Organisms → Viruses → Predicted Viral	3114	Open in IMG/M
3300009058\|Ga0102854_1011489	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2565	Open in IMG/M
3300009058\|Ga0102854_1158909	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	647	Open in IMG/M
3300009058\|Ga0102854_1221538	Not Available	542	Open in IMG/M
3300009075\|Ga0105090_10524602	Not Available	720	Open in IMG/M
3300009075\|Ga0105090_10569144	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	688	Open in IMG/M
3300009085\|Ga0105103_10037117	All Organisms → Viruses → Predicted Viral	2436	Open in IMG/M
3300009085\|Ga0105103_10254068	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	950	Open in IMG/M
3300009111\|Ga0115026_10636468	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	814	Open in IMG/M
3300009146\|Ga0105091_10064432	All Organisms → Viruses → Predicted Viral	1644	Open in IMG/M
3300009154\|Ga0114963_10002524	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	12515	Open in IMG/M
3300009165\|Ga0105102_10068572	All Organisms → Viruses → Predicted Viral	1601	Open in IMG/M
3300009165\|Ga0105102_10097245	All Organisms → Viruses → Predicted Viral	1377	Open in IMG/M
3300009168\|Ga0105104_10231787	Not Available	1006	Open in IMG/M
3300009169\|Ga0105097_10019718	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3552	Open in IMG/M
3300009169\|Ga0105097_10072464	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1869	Open in IMG/M
3300009169\|Ga0105097_10072709	All Organisms → Viruses → Predicted Viral	1866	Open in IMG/M
3300009169\|Ga0105097_10077596	Not Available	1805	Open in IMG/M
3300009169\|Ga0105097_10703669	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	572	Open in IMG/M
3300010157\|Ga0114964_10341613	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	708	Open in IMG/M
3300010316\|Ga0136655_1069737	Not Available	1078	Open in IMG/M
3300011337\|Ga0153702_1455	Not Available	13952	Open in IMG/M
3300012012\|Ga0153799_1002566	All Organisms → Viruses → Predicted Viral	4874	Open in IMG/M
3300012012\|Ga0153799_1004446	All Organisms → Viruses → Predicted Viral	3534	Open in IMG/M
3300012012\|Ga0153799_1021177	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1308	Open in IMG/M
3300012017\|Ga0153801_1014352	All Organisms → Viruses → Predicted Viral	1422	Open in IMG/M
3300012663\|Ga0157203_1007677	Not Available	1908	Open in IMG/M
3300013372\|Ga0177922_10445487	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1263	Open in IMG/M
3300013372\|Ga0177922_10503772	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	830	Open in IMG/M
3300013372\|Ga0177922_10966108	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1101	Open in IMG/M
3300014811\|Ga0119960_1063144	Not Available	638	Open in IMG/M
3300015050\|Ga0181338_1004224	Not Available	2466	Open in IMG/M
3300017716\|Ga0181350_1088495	Not Available	775	Open in IMG/M
3300017736\|Ga0181365_1124566	Not Available	617	Open in IMG/M
3300017777\|Ga0181357_1054950	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1547	Open in IMG/M
3300017778\|Ga0181349_1066966	Not Available	1383	Open in IMG/M
3300017785\|Ga0181355_1088469	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1289	Open in IMG/M
3300017785\|Ga0181355_1386511	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	508	Open in IMG/M
3300019784\|Ga0181359_1001370	Not Available	6467	Open in IMG/M
3300019784\|Ga0181359_1148063	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	808	Open in IMG/M
3300019784\|Ga0181359_1157934	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	771	Open in IMG/M
3300020048\|Ga0207193_1001641	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	39941	Open in IMG/M
3300020151\|Ga0211736_10704511	All Organisms → Viruses → Predicted Viral	1788	Open in IMG/M
3300020172\|Ga0211729_10660274	Not Available	853	Open in IMG/M
3300020498\|Ga0208050_1006664	Not Available	1387	Open in IMG/M
3300020548\|Ga0208856_1004138	Not Available	3164	Open in IMG/M
3300021328\|Ga0210298_1051465	All Organisms → Viruses → Predicted Viral	4207	Open in IMG/M
3300022190\|Ga0181354_1062614	Not Available	1236	Open in IMG/M
3300022200\|Ga0196901_1000466	Not Available	21182	Open in IMG/M
3300022407\|Ga0181351_1045049	All Organisms → Viruses → Predicted Viral	1854	Open in IMG/M
3300024343\|Ga0244777_10755801	Not Available	577	Open in IMG/M
3300024348\|Ga0244776_10030690	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	4325	Open in IMG/M
3300024348\|Ga0244776_10180109	All Organisms → Viruses → Predicted Viral	1519	Open in IMG/M
3300024348\|Ga0244776_10302190	All Organisms → Viruses → Predicted Viral	1092	Open in IMG/M
3300025896\|Ga0208916_10088734	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1300	Open in IMG/M
3300027203\|Ga0208925_100590	All Organisms → Viruses → Predicted Viral	2441	Open in IMG/M
3300027203\|Ga0208925_116774	Not Available	527	Open in IMG/M
3300027206\|Ga0208023_1016914	All Organisms → Viruses → Predicted Viral	1277	Open in IMG/M
3300027206\|Ga0208023_1083885	Not Available	500	Open in IMG/M
3300027367\|Ga0208801_1036446	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	770	Open in IMG/M
3300027608\|Ga0208974_1000097	Not Available	39826	Open in IMG/M
3300027608\|Ga0208974_1001118	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	10626	Open in IMG/M
3300027608\|Ga0208974_1026306	All Organisms → Viruses → Predicted Viral	1778	Open in IMG/M
3300027608\|Ga0208974_1167741	Not Available	547	Open in IMG/M
3300027659\|Ga0208975_1000770	Not Available	14770	Open in IMG/M
3300027659\|Ga0208975_1045508	All Organisms → Viruses → Predicted Viral	1361	Open in IMG/M
3300027675\|Ga0209077_1123021	Not Available	722	Open in IMG/M
3300027721\|Ga0209492_1015886	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2556	Open in IMG/M
3300027721\|Ga0209492_1065947	Not Available	1278	Open in IMG/M
3300027741\|Ga0209085_1254228	Not Available	688	Open in IMG/M
3300027743\|Ga0209593_10123989	Not Available	939	Open in IMG/M
3300027764\|Ga0209134_10278039	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	571	Open in IMG/M
3300027785\|Ga0209246_10051255	Not Available	1591	Open in IMG/M
3300027798\|Ga0209353_10025078	All Organisms → Viruses → Predicted Viral	2792	Open in IMG/M
3300027808\|Ga0209354_10052083	Not Available	1651	Open in IMG/M
3300027808\|Ga0209354_10301385	Not Available	637	Open in IMG/M
3300027956\|Ga0209820_1037486	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1270	Open in IMG/M
3300027972\|Ga0209079_10178950	Not Available	726	Open in IMG/M
3300031787\|Ga0315900_10836673	Not Available	629	Open in IMG/M
3300031857\|Ga0315909_10008759	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	11042	Open in IMG/M
3300034013\|Ga0334991_0036246	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2696	Open in IMG/M
3300034022\|Ga0335005_0001542	All Organisms → Viruses	18076	Open in IMG/M
3300034050\|Ga0335023_0000133	All Organisms → cellular organisms → Bacteria	42839	Open in IMG/M
3300034117\|Ga0335033_0103677	All Organisms → Viruses → Predicted Viral	1639	Open in IMG/M
3300034356\|Ga0335048_0119794	All Organisms → Viruses → Predicted Viral	1551	Open in IMG/M
3300034356\|Ga0335048_0309973	Not Available	816	Open in IMG/M
3300034357\|Ga0335064_0176513	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1337	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	76.79%
Marine	Environmental → Aquatic → Marine	23.21%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	31.25%
Lake	Environmental → Aquatic → Freshwater → Lake	20.54%
Sediment	Environmental → Aquatic → Freshwater → Sediment	19.64%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	17.86%
Coastal	Environmental → Aquatic → Marine → Coastal	5.36%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	2.68%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	28.57%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	19.64%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	19.64%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	17.86%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	5.36%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.79%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.89%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	19.64%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	17.86%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	16.96%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	8.04%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	7.14%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	6.25%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	4.46%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	2.68%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	2.68%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	1.79%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	1.79%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	1.79%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.79%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.79%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.89%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.89%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.89%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.89%
Aquatic	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Aquatic	0.89%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003277	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD	Environmental	Open in IMG/M
3300003393	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD	Environmental	Open in IMG/M
3300003394	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN	Environmental	Open in IMG/M
3300003616	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.DN	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300004781	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh	Environmental	Open in IMG/M
3300005581	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007593	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-3	Environmental	Open in IMG/M
3300007636	Estuarine microbial communities from the Columbia River estuary - metaG 1371A-3	Environmental	Open in IMG/M
3300007647	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02	Environmental	Open in IMG/M
3300007708	Estuarine microbial communities from the Columbia River estuary - metaG 1371B-02	Environmental	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300009058	Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010316	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNA	Environmental	Open in IMG/M
3300011337	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Ilsan	Environmental	Open in IMG/M
3300012012	Freshwater microbial communities from Eastern Basin Lake Erie, Ontario, Canada - Station 879 - Top - Depth 1m	Environmental	Open in IMG/M
3300012017	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1m	Environmental	Open in IMG/M
3300012663	Freshwater microbial communities from Indian River, Ontario, Canada - S50	Environmental	Open in IMG/M
3300013372	Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPs	Environmental	Open in IMG/M
3300014811	Aquatic viral communities from ballast water - Michigan State University - AB_ballast water	Environmental	Open in IMG/M
3300015050	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017716	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.DCM.D	Environmental	Open in IMG/M
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental	Open in IMG/M
3300017777	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.D.N	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020172	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1	Environmental	Open in IMG/M
3300020498	Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020548	Freshwater microbial communities from Lake Mendota, WI - 13JUL2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021328	Metatranscriptome of estuarine water microbial communities from the Columbia River estuary, Oregon, United States ? R877 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022190	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.N	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024348	0.2um to 3um size fraction coassembly	Environmental	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027203	Estuarine microbial communities from the Columbia River estuary - metaG 1371A-3 (SPAdes)	Environmental	Open in IMG/M
3300027206	Estuarine microbial communities from the Columbia River estuary - metaG 1370A-02 (SPAdes)	Environmental	Open in IMG/M
3300027367	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-02 (SPAdes)	Environmental	Open in IMG/M
3300027608	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027764	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027785	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027808	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DD (SPAdes)	Environmental	Open in IMG/M
3300027956	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027972	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300034013	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Jun2018-rr0034	Environmental	Open in IMG/M
3300034022	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Apr2018-rr0058	Environmental	Open in IMG/M
3300034050	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07May2013-rr0095	Environmental	Open in IMG/M
3300034117	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jun2014-rr0124	Environmental	Open in IMG/M
3300034356	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152	Environmental	Open in IMG/M
3300034357	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME12May2017-rr0187	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
B570J29032_1098727322	3300002408	Freshwater	MKTTPTKKAAKRGRPPKSKIIVDESPCNLASLIDQQEELSDDYLVMRVCNNPTWVIVRMDGVAVPVKCPSKLSNKLVGKRIKLCLVSSDPEDYYEYVS*
B570J40625_10000198450	3300002835	Freshwater	MNPPTPKKAAKRGRPAKKTITIDESSCSLDSLINQQIDEDFIVMRVCNNPSWVIVRMDGLAVPVKCPARLSNKLVGKRIKVCLVSADPEDYYEYAL*
B570J40625_1017482482	3300002835	Freshwater	MKQAPTKKAAKRGRPAKKTITIDESPCSLDNLIEQQIDEDFIVMRVCNNPSWVIVRMDGMAVPVKCSSRLSNKLVGKRIKVCLVSADPEDYYE
JGI25908J49247_100070732	3300003277	Freshwater Lake	MKKQATKAAKRGRPAKKTIIIDESPCSLDSLIEQQIDDDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDYYEYAS*
JGI25908J49247_100517372	3300003277	Freshwater Lake	MKPPTPKKAAKRGRPAKKTITIDESPCSLDKLIKQQIDEDFTVMRVCNNTSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLISAEPEDYYEYAS*
JGI25909J50240_10369922	3300003393	Freshwater Lake	SLTFCKQSLKISKRQFQMKPPTPEKAAKRGRPAKKTITIDESPCSLDKLIKQQIDEDFTVMRVCNNTSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLISAEPEDYYEYAS*
JGI25907J50239_10860972	3300003394	Freshwater Lake	MKKVAKKATKRGRPAKKTLIIDESPCSIDSLVNQQVEDDFLVMRICNNPSWVIVRMDGLAVPVKCPVRASNKLVGKRIKVCLVSAEPEDYYEYVS*
JGI25928J51866_10092521	3300003616	Freshwater Lake	AKKTITIDESPCSLDKLIKQQIDEDFTVMRVCNNTSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLISAEPEDYYEYASLNHTN
Ga0069718_100904498	3300004481	Sediment	MKQAPNKKAAKRGRPPKSKIIVDETPCSLASLIDQQEELSDDYLVMRVCNNPTWVVVRMDGVAVPVKCPSKLSNKLVGKRIKLCLVSADPEDYYEYVS*
Ga0069718_163147923	3300004481	Sediment	MKQAPTKKAAKRGRPAKKTITIDESPCSLDNLIEQQIDEDFIVMRVCNNPSWVIVRMDGMAVPVKCSSRLSNKLVGKRIKVCLVSADPEDYYEYAS*
Ga0062379_102010301	3300004781	Wetland Sediment	MKQTPAKKTAAKRGRPPKSRIVVDESPCSLANLIDQIEPESEDYLVMRVCNNPTWVIVRMDGVAVPVKCPSKLSNKLVGKRIKVCLVSADPEDYYEYVP*
Ga0049081_1000050813	3300005581	Freshwater Lentic	MKTQAKKAAKRGRPAKKFLIVEDSTCSLNSLIDQQIEDQFTVIRMCSNTSWVIVRMDGLAVPVKCSSRISQKLLGKRIKVCLVSADPEDYYEYVS*
Ga0049081_100036425	3300005581	Freshwater Lentic	MKTQAKKAAKRGRPAKKVFIMEDSPCSLNSLIDQQIEDQFTVIRMCSNTSWVIVRMDGLAVPVKCPCRVSPKLLGKRIKVCLISADPEDYYEYVS*
Ga0075471_103527313	3300006641	Aqueous	MKKTPNKTPAKRGRPPKSKIVIDERPCNISSLVAQQEASSGEYLVLRVCNNPTWVIIRMDGVAVPVKCPSKLSNKLVGKRVKVCLVSADPEDYYEYAP*
Ga0075464_101811103	3300006805	Aqueous	MKKQATKAAKRGRPAKKTIIIDESPCSLDSLIEQQIDDDFIVMRVCNNPSWVIVRMDGLAVPVKCPSSLSNKLVGKRIKVCLVSGDPEDYY
Ga0099851_10019133	3300007538	Aqueous	MKKVAKKATKRGRPAKKTLIIDESPCSLDSLIEQQIDEEFLVMRMCSNPSWVMIRMDGLAVPVKCPSRISQKLLGKRIKVCLVSADPDDYYEYVS*
Ga0102918_11668872	3300007593	Estuarine	MKQAPAKKTAAKRGRPPKSRIVVDESPCSLANLIDQHEPESEDYLVMRVCNNPTWVVVRMDGVAVPVKCPSKLSNKLVGKRIKVCLVSADPEDYYEYVP*
Ga0102856_10012572	3300007636	Estuarine	MKKQAEKAAKRGRPAKKTLIIDESPCSIDSLVNQQIEDDFLVMRICNNPSWVIVRMDGLAVPVKCPVRASNKLVGKRIKVCLVSADPEDYYEYAL*
Ga0102856_10709582	3300007636	Estuarine	MKKQAKKATKRGRPAKKTLIIDESPCSIDSLIEQQIDDDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDYYEYAS*
Ga0102855_10641992	3300007647	Estuarine	MKKQAKKATKRGRPAKKTLIIDESPCNIDSLVNQQIDDDFIVMRVCNNPSWVIVRMDGLAVPVKCPPRLSNKLVGKRIKVRLVSPDPEDYYEYAL*
Ga0102859_10093401	3300007708	Estuarine	KTITIDESSCSLDSLINQQIDEHFIVMRVCNNPSWVIVRMDGLAVPVKCPARLSNKLVGKRIKVCLVSADPEDYYEYAL*
Ga0102859_10184733	3300007708	Estuarine	MNPPTPKKAAKRGRPAKKTITIDESSCSLDSLINQQIDEDFIVMRVCNNPSWVIVRMDGLAVPVKCPARLSNKLVGKRIKVCLVSADPEDFYEYAS*
Ga0102859_12097472	3300007708	Estuarine	MKKQAAKAAKRGRPAKKTLIIDESPCSLDSLIEQQIDDDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDFYEYAS*
Ga0114340_10669013	3300008107	Freshwater, Plankton	MKQAPNKKAVKRGRPPKSKIIVDEAPCSLASLIDQQEELSDDYLVMRVCNNPTWVIVRMDGVAVPVKCPSKLSNKLVGKRIKLCLVSADPEDYYEYVP*
Ga0114364_11715111	3300008267	Freshwater, Plankton	APNKKAARRGRPPKSKIIVDDTPCSLASLIDQQEELSDDYLVMRVCNNPTWVIVRMDGVAVPVKCPSKLSNKLVGKRIKLCLVSADPEDYYEYVS*
Ga0114876_10238463	3300008448	Freshwater Lake	MKQPKTKKPAAKRGRPPKSKIVIDERPCSVANLVAQQEELSEDYLVMRVCNNPTWVIVRMDGVAVPVKCPSKLSNKLVGKRIKLCLVSADPEDYYEYVP*
Ga0102854_10114892	3300009058	Estuarine	MKKQAKKATKRGRPAKKTLIIDESPCNIDSLVNQQIDDDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVRLVSPDPEDYYEYAL*
Ga0102854_11589093	3300009058	Estuarine	MNPPTPKKAAKRGRPAKKTITIDESSCSLDSLINQQIDEDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDFYEYAS*
Ga0102854_12215381	3300009058	Estuarine	KSSMKKQAEKAAKRGRPAKKTLIIDESPCSIDSLIEQQIDDDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDYYEYAS*
Ga0105090_105246022	3300009075	Freshwater Sediment	KKAAKRGRPAKKTITIDESSCSLDSLINQQIDEDFIVMRVCNNPSWVIVRMDGLAVPVKCPARLSNKLVGKRIKVCLVSADPEDYYEYAL*
Ga0105090_105691441	3300009075	Freshwater Sediment	MKEAENKVAKRGRPPKKTLIIDESPSIKQSDEDFLVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKV
Ga0105103_100371172	3300009085	Freshwater Sediment	MKEAENKVAKRGRPPKKTLIIDESPSIKQSDEDFLVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSAEPEDFYEYAS*
Ga0105103_102540683	3300009085	Freshwater Sediment	MNPPTPKKAAKRGRPAKKTIIIDESLCSLDSLINQQIDEDFIVMRVCNNPSWVIVRMDGLAVPVKCPARLSNKLVGKRIKVCL
Ga0115026_106364682	3300009111	Wetland	MKTQAKKATKRGRPAKKTLIIDESPCEINDFTSNRIEDDFLVMRVCNNPNWVIVRMDGLAVPVKCPNRISNKLVGKRIKVCLVSAEPEDFYEYAS*
Ga0105091_100644323	3300009146	Freshwater Sediment	MNPPTPKKAAKRGRPAKKTIIIDESLCSLDSLINQQIDEDFIVMRVCNNPSWVIVRMDGLAVPVKCPARLSNKLVGKRIKVCLVSADPEDYYEYAL*
Ga0114963_1000252410	3300009154	Freshwater Lake	MKKQAKKTAKRGRPAKKTLTIDESLCSIDNLIEQQFDEKFLVVRSCSNPNWVIVRMDGQPIPVKCPNRLSNKLLGKMIKIRLVSSDPEDYY
Ga0105102_100685722	3300009165	Freshwater Sediment	MKTQVKKAAKRGRPFKKVLIIEDSPCSLNNLVEQQNDEEFRVMRLCSNLSWVIVRMDGLSVQVKCPSLISKKLLGKLIQVCLVSADPEDYYEYAP*
Ga0105102_100972452	3300009165	Freshwater Sediment	MKKQAAKAAKRGRPAKKTLIIDESPCSLDSLIEQQIDEDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDFYEYAS*
Ga0105104_102317872	3300009168	Freshwater Sediment	MNPPTPKKASKRGRPAKKTIIIDESLCSLDSLINQQIDEDFIVMRVCNNPSWVIVRMDGLAVPVKCPARLSNKLVGKRIKVCLVSADPEDYYEYAL*
Ga0105097_100197182	3300009169	Freshwater Sediment	LTIPKHLLQLTGLVDISMKKVAKKATKRGRPAKKTLIIDESPCDLDSEQIDKEFRVMRICSNLSWVIVRMDGLSVPVKCPSRLSNKLVGKLIKVCLVSAEPEDYYEYAP*
Ga0105097_100724642	3300009169	Freshwater Sediment	MKTQVKKAAKRGRPFKKVLIIEDSPCSLNNLVEQQNDEEFRVMRLCSNLSWVIVRMDGLSVPVKCPSRISKKLLGKLIKVCLVSADPEDYYEYAP*
Ga0105097_100727092	3300009169	Freshwater Sediment	MNPPTPKKAAKRGRPAKKTITIDESSCNLDSLINQQIDEDFIVMRVCNNPSWVIVRMDGLAVPVKCPARLSNKLVGKRIKVCLVSADPENYYEYAL*
Ga0105097_100775962	3300009169	Freshwater Sediment	RKHFQMNPPTPKKAAKRGRPAKKTITIDESSCSINSLVEQQIDEDFIVMRVCNNPSWVIVRMDGLAVPVKCPARLSNKLVGKRIKVCLVSADPEDFYEYAS*
Ga0105097_107036692	3300009169	Freshwater Sediment	MKEAENKVAKRGRPPKKTLIIDESPSIKQSDEDFLVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDFYEYAS*
Ga0114964_103416132	3300010157	Freshwater Lake	MKKQAKKTAKRGRPAKKTLTIDESPCSINNLIEQQFDEKFLVVRSCSNPNWVIVRMDGQPIPVKCPNKLSNKLLGKMIKIRLVSS
Ga0136655_10697372	3300010316	Freshwater To Marine Saline Gradient	NHLLQLTGLEDTSMKKQATKAAKRGRPAKKTIIIDESPCSLDSLIEQQIDDDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDYYEYAS*
Ga0153702_14552	3300011337	Freshwater	MKQVPTKKAAKRGRPPKSRIIVDEAPCSLASLIDQQEELSDDYLVMRVCNNPTWVIVRMDGVAVPVKCPSKLSNKLVGKRIKLCLVSSDPEDYYEYVP*
Ga0153799_10025663	3300012012	Freshwater	MKPPTPKKAAKRGRPAKKTITIDESPCSLDELIKQQIDEDFTVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLISAEPEDYYEYAP*
Ga0153799_10044463	3300012012	Freshwater	MKKQAAKAAKRGRPAKKTLIIDESPCSLDSLIEQQIDDDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDFYEYAL*
Ga0153799_10211772	3300012012	Freshwater	MGLVDISMKTQAKKAAKRGRPAKKFLIVEDSTCSLNSLIDQQIEDQFTVIRMCSNTSWVIVRMDGLAVPVKCSSRISQKLLGKRIKVCLVSADPEDYYEYVS*
Ga0153801_10143523	3300012017	Freshwater	MKPLTPEKAAKRGRPAKKTITIDESPCSLDKLIKQQIDEDFTVMRVCNNTSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLISAEPEDYYEYAS*
Ga0157203_10076771	3300012663	Freshwater	NSWVWWILIMKKQAKKATKRGRPAKKTLIIDESPCSIDNLVNQQIEDDFLVMRACNNPSWVIVRMDGLAVPVKCPSRASNKLVGKRIKVCLVSADPEDYYEYAL*
Ga0177922_104454873	3300013372	Freshwater	MKPPTPKKAAKRGRPAKKTITIDESPCSLDELIKQQIDEDFTVMRVCNNTSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLI
Ga0177922_105037721	3300013372	Freshwater	MKKQAAKAAKRGRPAKKTLIIDDSPCSLDSLIEQQINDDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDF
Ga0177922_109661083	3300013372	Freshwater	MKPLTPEKAAKRGRPAKKTITIDESPCSLDKLIKQQIDEDFTVMRVCNNTSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLI
Ga0119960_10631442	3300014811	Aquatic	MKQVPNKKAAKRGRPPKSKIIVDEAPCSLASLIDQQEELSDDYLVMRVCNNPTWVIVRMDGVAVPVKCPSKLSNKLVGKRIKLCLVSADPEDYYEYVS*
Ga0181338_10042241	3300015050	Freshwater Lake	TPEKAAKRGRPAKKTITIDESPCSLDKLIKQQIDEDFTVMRVCNNTSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLISAEPEDYYEYAS*
Ga0181350_10884951	3300017716	Freshwater Lake	RPAKKTITIDESPCSLDKLIKQQIDEDFTVMRVCNNTSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLISAEPEDYYEYAS
Ga0181365_11245661	3300017736	Freshwater Lake	TPEKAAKRGRPAKKTITIDESPCSLDKLIKQQIDEDFTVMRVCNNTSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLISAEPEDYYEYAS
Ga0181357_10549502	3300017777	Freshwater Lake	MKKQAAKVAKRGRPAKKTLIIDESPCSLDSLIEQQIDDDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDFYEYAS
Ga0181349_10669662	3300017778	Freshwater Lake	MKPPTPEKAAKRGRPAKKTITIDESPCSLDKLIKQQIDEDFTVMRVCNNTSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLISAEPEDYYEYAS
Ga0181355_10884693	3300017785	Freshwater Lake	MKKQATKAAKRGRPAKKTIIIDESPCSLDSLIEQQVDDDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDYYEYAS
Ga0181355_13865112	3300017785	Freshwater Lake	MKKQAAKAAKRGRPAKKTLIIDESPCSLDSLIEQQINDDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSAD
Ga0181359_10013708	3300019784	Freshwater Lake	MKKQATKAAKRGRPAKKTIIIDESPCSLDSLIEQQIDDDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDYYEYAS
Ga0181359_11480632	3300019784	Freshwater Lake	MKKQAAKAAKRGRPAKKTLIIDESPCSLDSLIEQQIDDDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDFYEYAS
Ga0181359_11579341	3300019784	Freshwater Lake	MKPPTPKKAAKRGRPAKKTITIDESPCSLDKLIKQQIDEDFTVMRVCNNTSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLISAEPE
Ga0207193_100164127	3300020048	Freshwater Lake Sediment	MKKQAKKATKRGRPAKKTLIIDESPCSINSLVNQQIEDDFLVMRICNNPSWVIVRMDGLAVPVKCPVRTSNKLVGKRIKVCLVSADPEDYYEYAL
Ga0211736_107045113	3300020151	Freshwater	MKQAPNKKAAKRGRPPKSKIIVDEAPCSLASLIDQQEELSDDYLVMRVCNNPTWVIVRMDGVAVPVKCPSKLSNKLVGKRIKLCLVSADPEDYYEYVP
Ga0211729_106602743	3300020172	Freshwater	MKQAPNKKAAKRGRPPKSKIIVDEAPCSLASLIDQQEELSDDYLVMRVCNNPTWVIVRMDGVAVPVKCPSKLSNKLVGKRIKLCLVSADPEDYYEYVPXVQNKSLKMSRLSMRIRNQ
Ga0208050_10066643	3300020498	Freshwater	MNPPTPKKAAKRGRPAKKTITIDESSCSLDSLINQQIDEDFIVMRVCNNPSWVIVRMDGLAVPVKCPARLSNKLVGKRIKVCLVSADPEDYYEYAL
Ga0208856_10041382	3300020548	Freshwater	MKTTPTKKAAKRGRPPKSKIIVDESPCNLASLIDQQEELSDDYLVMRVCNNPTWVIVRMDGVAVPVKCPSKLSNKLVGKRIKLCLVSSDPEDYYEYVS
Ga0210298_10514652	3300021328	Estuarine	MKKQATKAAKRGRPAKKTLIIDESPCSLDSLIEQQIDDDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDFYEYAS
Ga0181354_10626142	3300022190	Freshwater Lake	MKPPTPKKAAKRGRPAKKTITIDESPCSLDKLIKQQIDEDFTVMRVCNNTSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLISAEPEDYYEYAS
Ga0196901_100046611	3300022200	Aqueous	MKKVAKKATKRGRPAKKTLIIDESPCSLDSLIEQQIDEEFLVMRMCSNPSWVMIRMDGLAVPVKCPSRISQKLLGKRIKVCLVSADPDDYYEYVS
Ga0181351_10450492	3300022407	Freshwater Lake	TIANHLLQLTGLGDTSMKKQAAKAAKRGRPAKKTLIIDESPCSLDSLIEQQIDDDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDFYEYAS
Ga0244777_107558012	3300024343	Estuarine	MKKQAEKAAKRGRPAKKTLIIDESPCSIDSLVNQQIEDDFLVMRICNNPSWVIVRMDGLAVPVKCPVRASNKLVGKRIKVCLVSADPEDYYEYAL
Ga0244776_100306905	3300024348	Estuarine	MNPPTPKKAAKRGRPAKKTITIDESSCSLDSLINQQIDEDFIVMRVCNNPSWVIVRMDGLAVPVKCPARLSNKLVGKRIKVCLVSADPEDFYEYAS
Ga0244776_101801092	3300024348	Estuarine	MNPPTPKKAAKRGRPAKKTITIDESSCSLDSLINQQIDEHFIVMRVCNNPSWVIVRMDGLAVPVKCPARLSNKLVGKRIKVCLVSADPEDYYEYAL
Ga0244776_103021902	3300024348	Estuarine	MKKQAKKATKRGRPAKKTLIIDESPCSIDSLIEQQIDDDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDYYEYAS
Ga0208916_100887343	3300025896	Aqueous	MKKQATKAAKRGRPAKKTIIIDESPCSLDSLIEQQIDDDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLISAEPEDYYEYAS
Ga0208925_1005901	3300027203	Estuarine	KTLIIDESPCSIDSLVNQQIEDDFLVMRICNNPSWVIVRMDGLAVPVKCPVRASNKLVGKRIKVCLVSADPEDYYEYAL
Ga0208925_1167741	3300027203	Estuarine	MKQAPTKKAAKRGRPAKKTITIDESPCSLDNLIEQQIDEDFIVMRVCNNPSWVIVRMDGMAVPVKCSSRLSNKLVGKRIKVCLV
Ga0208023_10169142	3300027206	Estuarine	MKKQAKKATKRGRPAKKTLIIDESPCNIDSLVNQQIDDDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVRLVSPDPEDYYEYAL
Ga0208023_10838851	3300027206	Estuarine	GRPAKKTLIIDESPCSIDSLIEQQIDDDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDYYEYAS
Ga0208801_10364462	3300027367	Estuarine	MKKQAKKATKRGRPAKKTLIIDESPCNIDSLVNQQIDDDFIVMRVCNNPSWVIVRMDGLAVPVKCPPRLSNKLVGKRIKVRLVSPDPEDYYEYAL
Ga0208974_100009763	3300027608	Freshwater Lentic	MKTQAKKAAKRGRPAKKFLIVEDSTCSLNSLIDQQIEDQFTVIRMCSNTSWVIVRMDGLAVPVKCSSRISQKLLGKRIKVCLVSADPEDYYEYVS
Ga0208974_10011187	3300027608	Freshwater Lentic	MKPPTPKKAAKRGRPAKKTITIDESPCSLDELIKQQIDEDFTVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLISAEPEDYYEYAP
Ga0208974_10263062	3300027608	Freshwater Lentic	MGLVDISMKTQAKKAAKRGRPAKKVFIMEDSPCSLNSLIDQQIEDQFTVIRMCSNTSWVIVRMDGLAVPVKCPCRVSPKLLGKRIKVCLISADPEDYYEYVS
Ga0208974_11677411	3300027608	Freshwater Lentic	KKTITIDESPCSLDNLIEQQIDDDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDYYEYAS
Ga0208975_10007705	3300027659	Freshwater Lentic	MKTQAKKAAKRGRPAKKVFIMEDSPCSLNSLIDQQIEDQFTVIRMCSNTSWVIVRMDGLAVPVKCPCRVSPKLLGKRIKVCLISADPEDYYEYVS
Ga0208975_10455083	3300027659	Freshwater Lentic	MKPPTPEKAAKRGRPAKKTITIDESPCSLDELIKQQIDEDFTVMRVCNNTSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLISAEPEDYYEYAS
Ga0209077_11230212	3300027675	Freshwater Sediment	KKAAKRGRPAKKTIIIDESLCSLDSLINQQIDEDFIVMRVCNNPSWVIVRMDGLAVPVKCPARLSNKLVGKRIKVCLVSADPEDYYEYAL
Ga0209492_10158862	3300027721	Freshwater Sediment	MLTILNHLLQLTGLVDTSMKTQAKKAAKRGRPFKKVLIIEDSPCSLNNLVEQQNDEEFRVMRLCSNLSWVIVRMDGLSVPVKCPSLISKKLLGKLIKVCLVSADPEDYYEYAP
Ga0209492_10659472	3300027721	Freshwater Sediment	LTIPKHLLQLTGLVDISMKKVAKKATKRGRPAKKTLIIDESPCDLDSEQIDKEFRVMRICSNLSWVIVRMDGLSVPVKCPSRLSNKLVGKLIKVCLVSAEPEDYYEYAP
Ga0209085_12542282	3300027741	Freshwater Lake	EKKTAKRGRPAKKTLTIDESLCSIDNLIEQQFDEKFLVVRSCSNPNWVIVRMDGQPIPVKCPNRLSNKLLGKMIKIRLVSSDPEDYYEYVS
Ga0209593_101239892	3300027743	Freshwater Sediment	MNPPTPKKASKRGRPAKKTIIIDESLCSLDSLINQQIDEDFIVMRVCNNPSWVIVRMDGLAVPVKCPARLSNKLVGKRIKVCLVSADPEDYYEYAL
Ga0209134_102780392	3300027764	Freshwater Lake	MKKQAKKATKRGRPAKKTLIIDESPCSIDSLVNQQVEDDFLVMRICNNPSWVIVRMDGLAVPVKCPVRASNKLVGKRIKVCLVSAEPEDYYE
Ga0209246_100512552	3300027785	Freshwater Lake	MKKVAKKATKRGRPAKKTLIIDESPCSIDSLVNQQVEDDFLVMRICNNPSWVIVRMDGLAVPVKCPVRASNKLVGKRIKVCLVSAEPEDYYEYVS
Ga0209353_100250782	3300027798	Freshwater Lake	MKKQAAKAAKRGRPAKKTLIIDESPCSLDSLIEQQIDEGFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDFYEYAS
Ga0209354_100520832	3300027808	Freshwater Lake	KKATKRGRPAKKTLIIDESPCSIDSLVNQQVEDDFLVMRICNNPSWVIVRMDGLAVPVKCPVRASNKLVGKRIKVCLVSAEPEDYYEYVS
Ga0209354_103013852	3300027808	Freshwater Lake	ITLTIANHLLQLTGLGDTSMKKQAAKAAKRGRPAKKTLIIDESPCSLDSLIEQQIDDDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDFYEYAS
Ga0209820_10374861	3300027956	Freshwater Sediment	MNPPTPKKAAKRGRPAKKTIIIDESLCSINSLVEQQIDEDFIVMRVCNNPSWVIVRMDGLAVPVKCPARLSNKLVGK
Ga0209079_101789502	3300027972	Freshwater Sediment	KAAKRGRPAKKTITIDESPCSLDNLIEQQIDEDFIVMRVCNNPSWVIVRMDGLAVPVKCPARLSNKLVGKRIKVCLVSADPEDYYEYAL
Ga0315900_108366732	3300031787	Freshwater	MKTTKAKKTPAKRGRPPKSKVIIDERPCSVASLVAQQEEPSEEYLVLRVCNNPTWVVVRMDGVAVPVKCPVRVSNKLVGKRIKVCLVSGEPEDYYEYAP
Ga0315909_100087592	3300031857	Freshwater	MKQPKTKKPAAKRGRPPKSKIVIDERPCSVANLVAQQEELSDDYLVMRVCNNPTWVIVRMDGVAVPVKCPSKLSNKLVGKRIKLCLVSADPEDYYEYVP
Ga0334991_0036246_1085_1372	3300034013	Freshwater	MKKVAKKATKRGRPAKKTLIIDESPCSIDSLINQQVEDDFLVMRICNNPSWVIVRMDGLAVPVKCPVRSSNKLVGKRIKVCLVSAEPEDYYEYVS
Ga0335005_0001542_15308_15595	3300034022	Freshwater	MKKQAKKATKRGRPAKKTLIIDESPCSIDSLVNQQIEDDFLVMRICNNPSWVIVRMDGLAVPVKCPVRASNKLVGKRIKVCLVSADPEDYYEYAL
Ga0335023_0000133_11439_11729	3300034050	Freshwater	MNPPTPKKAAKRGRPAKKTITIDESSCSLDSLINQQIYEDFIVMRVCNNPSWVIVRMDGLAVPVKCPARLSNKLVGKRIKVCLVSADPEDFYEYAS
Ga0335033_0103677_1090_1377	3300034117	Freshwater	MKKQTAKAAKRGRPAKKTLIIDESPCSLDSLIEQQIDEDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDFYEYAS
Ga0335048_0119794_1109_1519	3300034356	Freshwater	VGLKKRGKIQLTFVATPPLQISITLTITNHLLQLTGLGDTSMKKQAAKAAKRGRPAKKTLIIDESPCSLDSLIEQQIDEDFIVMRVCNNPSWVIVRMDGLAVPVKCPSRLSNKLVGKRIKVCLVSADPEDFYEYAS
Ga0335048_0309973_563_814	3300034356	Freshwater	PKSKIIVDEAPCSLASLIDQQEELSDDYLVMRVCNNPTWVIVRMDGVAVPVKCPSKLSNKLVGKRIKLCLVSADPEDYYEYVS
Ga0335064_0176513_723_1013	3300034357	Freshwater	MNPPTPKKAAKRGRPAKKTIIIDESLCSLDSLINQQIDEDFIVMRVCNNPSWVIVRMDGLAVPVKCPARLSNKLVGKRIKVCLVSADPEDYYEYAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084134

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences