Metagenome / Metatranscriptome Family F084126

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084126
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	98 residues
Representative Sequence	VYRVLVIFPKSAGPVEVDALIEGIASSFKASAGSQPITRSVGSLMGPGAKAGEAGWILEADFPTLEDAMTALDAEDFQDVKAATETLPSTIFLFEVREV
Number of Associated Samples	91
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	22.32 %
% of genes near scaffold ends (potentially truncated)	32.14 %
% of genes from short scaffolds (< 2000 bps)	96.43 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.643 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (34.821 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.071 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.13% β-sheet: 22.05% Coil/Unstructured: 48.82%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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SCOP family	SCOP domain	Representative PDB	TM-score
d.58.4.11: Dimeric alpha+beta barrel	d1y0ha_	1y0h	0.77
d.58.4.11: Dimeric alpha+beta barrel	d1y0ha_	1y0h	0.77
d.58.4.4: Dimeric alpha+beta barrel	d1tr0a_	1tr0	0.76
d.58.4.20: Dimeric alpha+beta barrel	d2od4a1	2od4	0.76
d.58.4.0: Dimeric alpha+beta barrel	d5xzta_	5xzt	0.76
d.58.4.4: Dimeric alpha+beta barrel	d1tr0a_	1tr0	0.76
d.58.4.20: Dimeric alpha+beta barrel	d2od4a1	2od4	0.76
d.58.4.0: Dimeric alpha+beta barrel	d5xzta_	5xzt	0.76
d.58.4.0: Dimeric alpha+beta barrel	d5b08a_	5b08	0.75
d.58.4.0: Dimeric alpha+beta barrel	d5b08a_	5b08	0.75

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00441	Acyl-CoA_dh_1	3.57
PF14759	Reductase_C	2.68
PF12681	Glyoxalase_2	1.79
PF02518	HATPase_c	1.79
PF07883	Cupin_2	1.79
PF00857	Isochorismatase	1.79
PF10604	Polyketide_cyc2	1.79
PF00561	Abhydrolase_1	0.89
PF07366	SnoaL	0.89
PF12120	Arr-ms	0.89
PF07311	Dodecin	0.89
PF01266	DAO	0.89
PF07690	MFS_1	0.89
PF01548	DEDD_Tnp_IS110	0.89
PF01553	Acyltransferase	0.89
PF01872	RibD_C	0.89
PF00685	Sulfotransfer_1	0.89
PF11774	Lsr2	0.89
PF02537	CRCB	0.89
PF06974	WS_DGAT_C	0.89
PF01636	APH	0.89
PF09334	tRNA-synt_1g	0.89
PF12847	Methyltransf_18	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	3.57
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	1.79
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.79
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.89
COG0060	Isoleucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.89
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.89
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.89
COG0239	Fluoride ion exporter CrcB/FEX, affects chromosome condensation	Cell cycle control, cell division, chromosome partitioning [D]	0.89
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.89
COG0495	Leucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.89
COG0525	Valyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.89
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.89
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.89
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.64 %
Unclassified	root	N/A	5.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.64 %
Unclassified	root	N/A	5.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.64 %
Unclassified	root	N/A	5.36 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	91.96 %
Unclassified	root	N/A	5.36 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	91.07 %
Unclassified	root	N/A	5.36 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	85.71 %
Unclassified	root	N/A	5.36 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	82.14 %
Unclassified	root	N/A	5.36 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.89 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	82.14 %
Unclassified	root	N/A	5.36 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.89 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	82.14 %
Unclassified	root	N/A	5.36 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.89 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	82.14 %
Unclassified	root	N/A	5.36 %
Nocardia miyunensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia miyunensis	0.89 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig515808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1002	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2426271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1381	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_14570224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	945	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101282636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300000956\|JGI10216J12902_118154556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300001213\|JGIcombinedJ13530_108592797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	840	Open in IMG/M
3300004081\|Ga0063454_100931622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300004156\|Ga0062589_102318702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300004463\|Ga0063356_100332289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1908	Open in IMG/M
3300004463\|Ga0063356_101948751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	887	Open in IMG/M
3300004463\|Ga0063356_104733897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300004643\|Ga0062591_100373753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1164	Open in IMG/M
3300004643\|Ga0062591_102783536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300005093\|Ga0062594_101879464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300005655\|Ga0073905_10331303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300005764\|Ga0066903_100214035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2909	Open in IMG/M
3300005764\|Ga0066903_101357115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1332	Open in IMG/M
3300005937\|Ga0081455_11053752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300006051\|Ga0075364_11087050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300006057\|Ga0075026_100057088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1854	Open in IMG/M
3300006642\|Ga0075521_10080797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1468	Open in IMG/M
3300006844\|Ga0075428_101152966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	818	Open in IMG/M
3300006845\|Ga0075421_100158488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2825	Open in IMG/M
3300006918\|Ga0079216_11492561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300006969\|Ga0075419_10581062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	785	Open in IMG/M
3300009094\|Ga0111539_10740834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1144	Open in IMG/M
3300009146\|Ga0105091_10076811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1509	Open in IMG/M
3300009147\|Ga0114129_13436118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300009156\|Ga0111538_10568683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1437	Open in IMG/M
3300009792\|Ga0126374_10987035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300010036\|Ga0126305_10716616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	677	Open in IMG/M
3300010044\|Ga0126310_10487531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	898	Open in IMG/M
3300010356\|Ga0116237_10398733	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300010398\|Ga0126383_12720350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300012897\|Ga0157285_10213381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300012943\|Ga0164241_11158261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300012985\|Ga0164308_10394912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1129	Open in IMG/M
3300014322\|Ga0075355_1220196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300014326\|Ga0157380_12386262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300014969\|Ga0157376_12724596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300015258\|Ga0180093_1196123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300015373\|Ga0132257_103347641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300015374\|Ga0132255_104560806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300017965\|Ga0190266_10394973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	765	Open in IMG/M
3300018067\|Ga0184611_1048557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1410	Open in IMG/M
3300018465\|Ga0190269_10095983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1444	Open in IMG/M
3300018465\|Ga0190269_12026040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300018466\|Ga0190268_11266178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300018476\|Ga0190274_11174796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	850	Open in IMG/M
3300018476\|Ga0190274_11663081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	732	Open in IMG/M
3300018481\|Ga0190271_10796649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1069	Open in IMG/M
3300019356\|Ga0173481_10211405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	848	Open in IMG/M
3300019377\|Ga0190264_11207400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300022756\|Ga0222622_10491811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	876	Open in IMG/M
3300025930\|Ga0207701_10371887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1234	Open in IMG/M
3300025960\|Ga0207651_11344309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300027675\|Ga0209077_1063626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1011	Open in IMG/M
3300027880\|Ga0209481_10282946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	839	Open in IMG/M
3300027909\|Ga0209382_10579101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1225	Open in IMG/M
3300028589\|Ga0247818_10922591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300028592\|Ga0247822_11505916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300028754\|Ga0307297_10364243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300028870\|Ga0302254_10329741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300029984\|Ga0311332_10771214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	766	Open in IMG/M
3300029987\|Ga0311334_11683112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300029989\|Ga0311365_11565735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300029990\|Ga0311336_10331430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1265	Open in IMG/M
3300029990\|Ga0311336_10426044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1116	Open in IMG/M
3300029990\|Ga0311336_11311922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300030000\|Ga0311337_11939179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300030002\|Ga0311350_10954683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	767	Open in IMG/M
3300030002\|Ga0311350_11032086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300030002\|Ga0311350_11598359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300030114\|Ga0311333_10302186	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300030114\|Ga0311333_10587449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	921	Open in IMG/M
3300030114\|Ga0311333_10756708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	813	Open in IMG/M
3300030294\|Ga0311349_10744689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	924	Open in IMG/M
3300030294\|Ga0311349_10920856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	821	Open in IMG/M
3300030294\|Ga0311349_12102267	Not Available	519	Open in IMG/M
3300030838\|Ga0311335_10969471	Not Available	606	Open in IMG/M
3300030943\|Ga0311366_10299146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1395	Open in IMG/M
3300031232\|Ga0302323_100280979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1718	Open in IMG/M
3300031232\|Ga0302323_101704895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	712	Open in IMG/M
3300031521\|Ga0311364_11194960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	756	Open in IMG/M
3300031538\|Ga0310888_10982525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300031547\|Ga0310887_10017959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2748	Open in IMG/M
3300031562\|Ga0310886_10628186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300031726\|Ga0302321_100574477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1253	Open in IMG/M
3300031726\|Ga0302321_101055486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	927	Open in IMG/M
3300031726\|Ga0302321_101433560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	795	Open in IMG/M
3300031854\|Ga0310904_10676855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	711	Open in IMG/M
3300031858\|Ga0310892_10879693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	626	Open in IMG/M
3300031862\|Ga0315280_10413390	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300031902\|Ga0302322_103767256	Not Available	518	Open in IMG/M
3300031918\|Ga0311367_10237118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1903	Open in IMG/M
3300031918\|Ga0311367_11860348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300031940\|Ga0310901_10570058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	515	Open in IMG/M
3300032003\|Ga0310897_10691722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300032012\|Ga0310902_10572442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	747	Open in IMG/M
3300032017\|Ga0310899_10182699	All Organisms → cellular organisms → Bacteria → Terrabacteria group	917	Open in IMG/M
3300032018\|Ga0315272_10223678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	901	Open in IMG/M
3300032075\|Ga0310890_10685697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	801	Open in IMG/M
3300032075\|Ga0310890_10974837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300032126\|Ga0307415_100165049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia miyunensis	1721	Open in IMG/M
3300032164\|Ga0315283_10164545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2375	Open in IMG/M
3300032164\|Ga0315283_11891958	Not Available	597	Open in IMG/M
3300032256\|Ga0315271_10930294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	750	Open in IMG/M
3300032397\|Ga0315287_11407138	Not Available	793	Open in IMG/M
3300033550\|Ga0247829_10267404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1380	Open in IMG/M
3300033550\|Ga0247829_10772425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	800	Open in IMG/M
3300034129\|Ga0370493_0224588	Not Available	631	Open in IMG/M
3300034662\|Ga0314783_153778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.25%
Host-Associated	Host-Associated	16.96%
Engineered	Engineered	1.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.64%
Plants	Host-Associated → Plants	16.96%
Aquatic	Environmental → Aquatic	11.61%
Wastewater	Engineered → Wastewater	1.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.64%
Peat	Environmental → Terrestrial → Peat	25.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.71%
Freshwater	Environmental → Aquatic → Freshwater	7.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.36%
Sediment	Environmental → Aquatic → Sediment	3.57%
Marine	Environmental → Aquatic → Marine	0.89%
Roots	Host-Associated → Plants → Roots	0.89%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.89%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.18%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	25.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.82%
Lake	Environmental → Aquatic → Freshwater → Lake	5.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.57%
Loam	Environmental → Terrestrial → Soil → Loam	2.68%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.79%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.89%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.89%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	25.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.18%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	14.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.82%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	5.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.57%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.79%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.89%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	25.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	14.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.14%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	5.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.57%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.79%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.79%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.89%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.89%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.89%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.89%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005655	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB14_supernatant	Engineered	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010356	AD_USDEca	Engineered	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300014322	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028870	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031862	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_40	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031918	III_Fen_N3 coassembly	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034129	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_16	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_13135760	2124908045	Soil	MAVPRRYSSRVYRALVMFPKSADPAQVDALIESIASSFKASAGSQPITRSEGSLMGPGARTGAASCILEADFPTLEDAMTALDAEDFQEAKTSVEGLGSTIFLFEVRDV
ICChiseqgaiiDRAFT_24262711	3300000033	Soil	MFPKSADPAKVDALIEGIASSFKASAGSQPITRSVGSLMGPGAKAGAAGWILEADFPTLEDAMTALHAEDFQDVKASTETLGSTIFLFELGEV*
ICChiseqgaiiFebDRAFT_145702242	3300000363	Soil	MFPRSADPVEVDALIEDIASSFKASAGSQPITRSVGPLMGPGAKAGEAGWILEANFRTLEDAMTALHADDFQDAKASTETLGTTIFLFELGEV*
INPhiseqgaiiFebDRAFT_1012826361	3300000364	Soil	MFPKSADPAEIDTLIGGIASSFKASTGSQPITRNLGSLMGPGAKAAQAGWILEADFPTLEDAMTALHAEDFQNAKARTETLGSTIFLFEVQEV*
JGI10216J12902_1181545561	3300000956	Soil	VYRALVMFPKSADPAEVETLIEGIASSFKASAGSLPVTRSQGSLMGPGAKAGEAGWILEADFPTLEDAMTALKAEDFQHAKARTETLGSTIFLFEVGEV*
JGIcombinedJ13530_1085927971	3300001213	Wetland	MFPRSADPMEVDDLVAGITSSFRASAGSQSITHSVGPLMGPGARAGEAGWILEANFSTLEDAMTALHAEDFQDPKARTEALGSTIFLFEVKEL*
Ga0063454_1009316222	3300004081	Soil	MYRSLVMFPKSSDPAEVDAVIEGIASSFRASAGRQPITRSVGSLMGPGAQAGEAGWILEADFPTLEDAMRALDGEDFQNVKATAEALASAIFLFELQDV*
Ga0062589_1023187022	3300004156	Soil	MFPTSVGPADVDALIKGIASSFKANAGSQPITRSVGSLMGPGAKAGEAGWILEADFPTLEDAMTALDAEDLQDVKAATEALASTIFLFEVREV*
Ga0063356_1003322892	3300004463	Arabidopsis Thaliana Rhizosphere	MFPRSADPVEVDALIEDIASSFKASAGSQPITRSVGPLMGPGAKAGEAGWILEANFRTLEDAMTALHADDFQDAKASTETLGSTIFLFELGEV*
Ga0063356_1019487511	3300004463	Arabidopsis Thaliana Rhizosphere	MFPKSADPAEVDTLIEGIAASFKASTGSQPITRNLGSLMGPGAKAGEAGWILEADFPTLEDAMTALHADDFQDAKARTESLGSTIFLFEVQDV*
Ga0063356_1047338971	3300004463	Arabidopsis Thaliana Rhizosphere	AVDWASSCRLGHYRWRVYRALVMFPTSVGPADVDALIKGIASSFKANAGSQPITRSVGSLMGPGAKAGEAGCILEADFATLEDAMTALQAADFQDMKANTETLGSTIFLFEVQEV*
Ga0062591_1003737532	3300004643	Soil	MFPRSAGPAEVDALIERIASSFKASAGSQSITRSVGSLMGPGAKAGEAGWILEADFTTLEDAMTALDADDFQDVKATTETLASTIFLFEVGEV*
Ga0062591_1027835361	3300004643	Soil	RPGSGAVIEPAVAWASSCRLGHYRWRVYRALVMFPTSVGPADVDALIKGIASSFKANAGSQPITRSVGSLMGPGAKAGEAGCILEADFATLEDAMTALQAADFQDMKANTETLGSTIFLFEVQEV*
Ga0062594_1018794641	3300005093	Soil	RFGHYRWRVYRALVMFPTSAGPADVDALINGIASSFKVNAGSQPITRSVGSLMGPGAKAGEAGCILEADFATLEDAMTALQAEDFQDIKANTETLGSTIFLFEVQEV*
Ga0073905_103313031	3300005655	Activated Sludge	LVMLPKSADPAEVEDLVEGIASSFRSSTGSDPITRSVGPLMGPGAQAGDAGWIIEADFPTLEDAMAALGAEGFQGVKTKAEALTSTIFLFEIAKL*
Ga0066903_1002140352	3300005764	Tropical Forest Soil	MYRALVMFPKSADSVEVDALIESIASSFKASARGQAITRSVDSLMGPGAKAGMAGWILEADFPSLDDAMTALHAEGFQDAKARTEALGSTILLFEAREV*
Ga0066903_1013571152	3300005764	Tropical Forest Soil	MFPRSVDPVEVDALIEGITSSFKASTGSQPITRSVGSLMGPGGKAGEAGWILEADFPTLEDAMTALHADDFQEPKARTETLGSTIFLFEVREV*
Ga0081455_110537521	3300005937	Tabebuia Heterophylla Rhizosphere	MYRVVVMFPQSAGPAQVPALIEGIALSFKASAGSQPVTRSVGSLMGPGAQAGEAGWILEADFPTLEDAMTALDADDFQDVKATTETLTSTIFLFEIEEV*
Ga0075364_110870501	3300006051	Populus Endosphere	MFPKSADPAQVDELIDAIASSFRASGTREPITRSVGSLMGPGAQAGEAGWILEADFATLEDAMTALDADGFQEAKATAETLTSTIFLFEIAEV*
Ga0075026_1000570883	3300006057	Watersheds	MYRAMVMFPKSARAAEVDALIEVIASSFTASPGFQAVTRSTGALMGPGAKGGEVGAILEADFASLDDVLAALHAEDFHDVKTATEALGTTIFLFELTTA*
Ga0075521_100807971	3300006642	Arctic Peat Soil	MYRTLVMFPKSASPVEVDALIEAIASSFTGSAGFQAITRSTGALMGPGAKTGAVGWILEADFASLDDAMAALHAEGFQDVKAATESVGTTIFLFELTTA*
Ga0075428_1011529661	3300006844	Populus Rhizosphere	MYRVLVMFPKSAGSAEVDALIEGIASSFKAGAGSQSITRSAGSLMGPGAKAGEAGWILEADFPTLEDAMTALDADDFQDVKATTETLTSSIFLFEIDEV*
Ga0075421_1001584882	3300006845	Populus Rhizosphere	MYRVLVMFPKSAGPAQVDALTDAIASSFRVSAGSQPITRSVGSLMGPGAQAGEAGWILEADFPTLEDAMTALDADDFQDVKATTETLTSSIFLFEIDEV*
Ga0079216_114925611	3300006918	Agricultural Soil	MYRVLVMFPKSAGAAEVDALIERIASSFKASAGSQPITRSVGSLMGPGAQAGEAGWILEADFPTLEHAMTALDADDFQDLKATAERLTSTIFLFEIEGV*
Ga0075419_105810621	3300006969	Populus Rhizosphere	LVMFPNSAGPAQVDALTDAIASSFKASAGSQPITRSVGSLMGPGAQAAEAGWILEADFPTLEDAMTALDADDFQDVKATTETLTSSIFLFEIDEV*
Ga0111539_107408341	3300009094	Populus Rhizosphere	MFPRSAGPAEVDALIERIASSFKASAGSQSITRSVGSLMGPGAKAGEAGWILEADFPTLEDAMTALDAEDFQDVKATAETLTSTIFLFEIEEV*
Ga0105091_100768113	3300009146	Freshwater Sediment	VYRVLVIFPKSAGPVEVDALIEGIASSFKASAGSQPITRSVGSLMGPGAKAGEAGWILEADFPTLEDAMTALDAEDFQDVKAATETLPSTIFLFEVREV*
Ga0114129_134361181	3300009147	Populus Rhizosphere	MYRVLVMFPKSAGSAEVDALIEGIASSFKASAGSQPITRSVGELMGPGAKAGEAGWILEADFPTLEDAMTALDADDFQDVKATTETLTSSIFLFEIDEV*
Ga0111538_105686832	3300009156	Populus Rhizosphere	MYRVLVMFPKSAGSAEVDALIEGIASSFKAGAGSQSITRSAGSLMGPGAKAGEAGWILEADFPTLEDAMTALDAEDFQDVKATAETLTSTIFLFEIEEV*
Ga0126374_109870352	3300009792	Tropical Forest Soil	MYRALVMFPKSADSVEVDALIESIASSFKASARGQAITRSVDSLMGPGAKAGMAGWILEADFPSLDDAMTALHAEGFQDAKARTEALGSTI
Ga0126305_107166161	3300010036	Serpentine Soil	VYRALVIFPRSAGPVEVDSLIEGIASSFEASAGSQAITRSVGSLMGPGAKAGSAGWILEADFATLEDAMTALDAEDFQDVKAATETLHPQIFLFEVREV*
Ga0126310_104875311	3300010044	Serpentine Soil	MFPKSADALEVDALIESIASSFKAGAGSRLITRNEGSLMGPGAKTGEAGWILEADFPTLEDAMTALQAPDFQDAKARTERLGSTIFLFEVREV*
Ga0116237_103987332	3300010356	Anaerobic Digestor Sludge	MLAMLPAAADPAEVDVLIESIATSFEASEASPVTRSVGPLMGPGAQAGAAGWILEADFVSLEAAMTAIHAGHFQDVKAKTEALGTTLFLFEIQDV*
Ga0126383_127203501	3300010398	Tropical Forest Soil	MYRTLVMFPKSAGPAEVDGLIEGIASSFKASGGSQPITRSMGPLMGPGAKAGQAGWLLEADFPTLEAAMTALHAEGFQDAKARTEALGSTILLFEAREV*
Ga0157285_102133811	3300012897	Soil	MFPRSAGPAEVDALIERIASSFKASAGSQSITRSVGSLMGPGAKAGEAGWILEADFTTLEDAMTALDADEFQDVKATTETLASTIFLFEVGEV*
Ga0164241_111582611	3300012943	Soil	MYRALVMFPKSADAAEVDALIEGTASSFKASALSQRITRSQGSLLGPGAQAGEAGWILEADFLTLEDAMKALDAEDFQEVAAATEALTSTI
Ga0164308_103949122	3300012985	Soil	LVIFPKSAGSVEVDALIEGIASSFKASAGSQPITRSVGSLMGPGAKAGEAGWILEADFPTLEDAMTALNAEDFKDVKAATEMLASTIVLFEVREM*
Ga0075355_12201961	3300014322	Natural And Restored Wetlands	MFPRTAEAAEVDALIESIASSFRAGEGSRVVTRNEGALMGPAARSGEAGWILEADFLTLGDAMTALQAEGFQDTKARTEALGSTLFLFEVREV*
Ga0157380_123862621	3300014326	Switchgrass Rhizosphere	TLVMFPKSADPTEVDALIERIASSFKASAGSQPITRSDGALMGPGARAGEAGCIFEADFATLEDAMTALGADDFQETKTSTEELGSTIFLFELREV*
Ga0157376_127245961	3300014969	Miscanthus Rhizosphere	VYRALVIFPKSAGPVEVDALIEGIASSFKASAGSQLITRSVGSLMGPGAKAGEAGWILEADFTTLEDAMTALDAEDFQHVKAATETLASTIFLFEVREV*
Ga0180093_11961231	3300015258	Soil	VYRALVIFPKSAGPVEVDALIEGIASSFKASAGSQPITRSVGSLMGPGARAGEAGWILEADFPTLEDAMTALDADDFQDVKAATETLASTIFLFEVREV*
Ga0132257_1033476411	3300015373	Arabidopsis Rhizosphere	VYRALVIFPKSAGPVEVDALIEGIASSFKASAGSQLITRSVGSLMGPGAKAGEAGWILEADFPTLEDAMTALDAEDFQGVKAATETLAAAIFLFEVGEV*
Ga0132255_1045608062	3300015374	Arabidopsis Rhizosphere	VYRALVIFPKSAGSVEVDALIEGIASSFKASAGSQLITRSVGSLMGPGAKAGEAGWILEADFPTLEDAMTALDAEDFQHVKAAIETLASTIFLFEVREV*
Ga0190266_103949731	3300017965	Soil	VYRVLVIFPKSAGPVEVDALIEGIASSFKASAGGQPITRSVGSLMGPGAKAGEAGWILEADFPTLEDAMTALDAEDFQEVKAATETLASTIFLFEVREV
Ga0184611_10485572	3300018067	Groundwater Sediment	MFPKTAGSDEVDALIEGIASSFKASAGSQPITRSVGSLMGPGAKAGEAGWILEADFATLEHAMTALHAENFQDAKATTETLGSTIFLFEFREL
Ga0190269_100959832	3300018465	Soil	MYRALVMFPKSASPAEVDALIEGIASSFRASAGSLPITRNAGSLMGPGAHAGEAGWILEADFATLEDAMTALDAEDFQDVKATAETLTSAIFLFEIVDV
Ga0190269_120260401	3300018465	Soil	LLLFPKAADPAEVDALIQDIASSFKGRAGSQAITRSAGTLMGPGAMNGEAGWILEADFASLEDALSAIDAEDFQEVKTATEALGSTIFLFELGEA
Ga0190268_112661782	3300018466	Soil	RVYRALVMFPRSADPTEVDTLIERIASSFKASAGSQPITRSLGSLMGPGAKAGEAGWIFEADFPTLEDALTALDAEDFHDAKVRTETLGSTIFLFEVGEV
Ga0190274_111747961	3300018476	Soil	LVMFPTSVGPADVDTLINGIASSFKANAGSQPITRSVGSLMGPGAKAGEAGCILEADFATLEDAMTALQAADFQDMKANTETLGSTIFLFEVQEV
Ga0190274_116630812	3300018476	Soil	MYRVLVMFPKSAGPAEVDALIEGIASSFKSSAGSQPITRSVGSLMGPGAQAGEAGWILEADFPTLEDAMTALDAEDFQDVKATAETLTSTIFLFEVGEV
Ga0190271_107966492	3300018481	Soil	MFPKSAGPVEVDALIEGIASSFRASAGSQPITRSVGSLMGPGAKAGEAGWILEADFPTLEDAMTALDAEDFQDVKAATETLASTIFLFEVREV
Ga0173481_102114052	3300019356	Soil	GHYRWRVYRALVMFPTSVGPADVDALIKGIASSFKANAGSQPITRSVGSLMGPGAKAGEAGCILEADFATLEDAMTALQAADFQDMKANTETLGSTIFLFEVQEV
Ga0190264_112074001	3300019377	Soil	VEVDALIEGIASSFKASAGSQPITRSVGSLMGPGAKAGEAGWILEADFPTIEDAMTALDAEDFQDVKATTETLTSTIFLFEIEEVRSVLAPEARPSPPT
Ga0222622_104918111	3300022756	Groundwater Sediment	MFPKTAGSDEVDALIEGIASSFKASAGSQPITRSLGSLMGPGAKAGAAGWILEADFPTLEDAMTALQVEDFQDARATTEALGSTIFLIEFREL
Ga0207701_103718872	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VIFPKSAGPVEVDALIEGIASSFKASAGSQLITRSVGSLMGPGAKAGEAGWILEADFPTLEDAMTALDAEDFQHVKAATETLASTIFLFEVREV
Ga0207651_113443091	3300025960	Switchgrass Rhizosphere	VYRALVIFPKSAGPVEVDALIEGIASSFKASAGSQLITRSVGSLMGPGAKAGEAGWILEANFPTLEDAMTALDAEDFQHVKAATETLASTIFLFEVREV
Ga0209077_10636262	3300027675	Freshwater Sediment	VYRVLVIFPKSAGPVEVDALIEGIASSFKASAGSQPITRSVGSLMGPGAKAGEAGWILEADFPTLEDAMTALDAEDFQDVKAATETLPSTIFLFEVREV
Ga0209481_102829461	3300027880	Populus Rhizosphere	PTTCRLRRYRWHVYRTLVMFPRSAGPAEVDALIEAIASSFKASAGSQPITRSVGSLMGPGAQAAEAGWILEADFPTLEDAMTALDADDFQDVKATTETLTSSIFLFEIDEV
Ga0209382_105791011	3300027909	Populus Rhizosphere	MYRVLVMFPKSAGPAQVDALTDAIASSFRVSAGSQPITRSVGSLMGPGAQAGEAGWILEADFPTLEDAMTALDADDFQDVKATTETLTSSIFLFEIDEV
Ga0247818_109225912	3300028589	Soil	RVYRTLVMFPKSADPAEVDALIAGIASSFKASAGSQPITRSVGSLMGPGAKAGQAGWILEADFPTIEDAMTALHAEDFQDAKARTEALGSIIFLFEIQEV
Ga0247822_115059161	3300028592	Soil	EGIASSFKASAGSQPITRSVGSLMGPGAKAGEAGWILEADFPTLEDAMTALDAEDFQDVKAATETLASTIFLFEVREV
Ga0307297_103642432	3300028754	Soil	MFPKTAGSDEVDALIEGIASSFKASAGSQPITRSLGSLMGPGAKAGAAGWILEADFPTLEDAMTALHAENFQDAKATTETLGSTIFLFEVQEV
Ga0302254_103297411	3300028870	Fen	MARAINALVGAEIPTATYDRRMYRALVMFPKSAGPAEVEALIESIASSFKANTGSQPITRSVGSLMGPGAQAGEAGWILEADFSTLEDAMTALNAEDFSDIKANAETLTST
Ga0311332_107712142	3300029984	Fen	VSAPHHPSRSALALPDAGATVRRVYRALVMFPRAADPVEVDALIEGIASSLRSNVGSTLITRSEGSLMGPGAKAGDAGAILEADFPTIEDAMAALNATDFQDVKARTEALG
Ga0311334_116831122	3300029987	Fen	MYRALVMFPKSASPVEVAALIEGIAASFTASPGFQAITRSAGALMGPGAKAGDVGWILEADFASLDDVMAALRAEGFQDVKAATESVGTTIFLFESTTV
Ga0311365_115657351	3300029989	Fen	DVAKAVPDTTCRVHMARAINALVGAEIPTATYDRRMYRALVMFPKSAGPAEVEALIESIASSFKANTGSQPITRSVGSLMGPGAQAGEAGWILEADFSTLEDAMTALNAEDFSDIKANAETLTSTIFLFEVQEV
Ga0311336_103314303	3300029990	Fen	MARAINALVGAEIPTATYDRRMYRALVMFPKSAGPAEVEALIESIASSFKANTGSQPITRSVGSLMGPGAQAGEAGWILEADFSTLEDAMTALNAEDFSDIKANAETLTSTIFLFEVQEV
Ga0311336_104260441	3300029990	Fen	MFPKSASPVEVAALIEGIAASFTASPGFQAITRSAGALMGPGAKAGDVGWILEADFASLDDVMAALRAEGFQDVKAATESVGTTIFLFESTTV
Ga0311336_113119221	3300029990	Fen	RALVMFPRAADPVEVDALIEGIASSLRSNVGSTLITRSEGSLMGPGAKAGEAGAVLEADFPTIEDAMSALNATDFQDVKARTEALGSTIFLFEVREA
Ga0311337_119391791	3300030000	Fen	IEVIASSFKASVGSQPITRSVGSLMGPGAKAGEAGWILEADFPSLEDAMSALHAEDFQAAKERTETLGSTIFLFEVREV
Ga0311350_109546831	3300030002	Fen	MYRAVVMFPKAAPLDEVDALIQGIATSFRASAGFQAVTRSLGALMGPGARVGDVGAILEADFASLEDVMAALHDESFHDVKEATEALGTTIFLFECTRA
Ga0311350_110320861	3300030002	Fen	MYRALVMFPKSASPAEVDTLIEGIASSFAASAGFQAITRSVGALMGPGAQSGDVGWILEADFASLEDVLAALHSDTFSDVRAGTESLGTTILLFENATV
Ga0311350_115983592	3300030002	Fen	MIRTLVMFPKSASPVDVDALIEGIASSFRASAGSQSITRSTGGLMGPGAKAGEVGWILEADFATLDDAMAALHADNFQDVKAATESLGTTIFLFEFQDL
Ga0311333_103021861	3300030114	Fen	IQGIATSFRASAGFQAVTRSLGALMGPGARVGDVGAILEADFASLDDVMAALHDESFHDVKEATEALGTTIFLFEFTSA
Ga0311333_105874491	3300030114	Fen	MARAINALVGAEIPTATYDRRMYRALVMFPKSAGPAEVEALIESIASSFKANTGSQPITRSVGSLMGPGAQAGEVGWILEADFSTLEDAMAALNAEDFSDIKANAETLTSTIFLFEVQEV
Ga0311333_107567081	3300030114	Fen	ALVMFPTSAGQAGVEALIEGIASSFKANAGSQSITRSVGSLMGPGAQAGEAGWILEADFSTLEDAMAAMNAEDFRDVKAAAETLTSKIFLFEVREV
Ga0311349_107446892	3300030294	Fen	MYRAVVMFPKAAPSDEVDALIQGIATSFRASAGFQAVTRSLGALMGPGARVGDVGAILEADFASLEDVMAALHDEGFHDVKEATEALGTTIFLFEFTSA
Ga0311349_109208562	3300030294	Fen	TCRARMARAINALVGAEIPTATYDRRMYRALVMFPKSAGPAEVEALIESIASSFKANTGSQPITRSVGSLMGPGAQAGEAGWILEADFSTLEDAMTALNAEDFSDIKANAETLTSTIFLFEVQEV
Ga0311349_121022672	3300030294	Fen	AEVDALIEGIASSFTASPGFQAVTRSTGALMGPGAKGGEVGAILEADFASLDDVLAALHAEDFHDVKVATESLGTTIFLFEVTTA
Ga0311335_109694711	3300030838	Fen	MYRAMVMFPKSARAAEVDALIEGIASSFTASPGFQAVTRSTGALMGPGAKGGEVGAILEADFASLDDVLAALHAEDFHDVKTATESLGTTIFLFELTTA
Ga0311366_102991463	3300030943	Fen	MYRAMVMFPKSARAAEVDALIEGIASSFTASHGFQAVTRSTGALMGPGAKGGEVGAILEADFASLDDVLAALHAEDFHDVKTATESL
Ga0302323_1002809792	3300031232	Fen	VSAPHHPSRSALALPDAGATVRRVYRALVMFPRAADPVEVDALIEGIASSLRSNVGSTLITRSEGSLMGPGAKAGEAGAVLEADFPTIEDAMSALNATDFQDVKARTEALGSTIFLFEVREV
Ga0302323_1017048952	3300031232	Fen	MYRALVMFPKSASAAKVEALVAGIQESFTATAGFLAMSRSVGALMGPGARDGDVGWILEADFDSLEDVMAVLHADSFQQWKAATEATGTTIFLFEVASG
Ga0311364_111949601	3300031521	Fen	VSAPHHPSRSALALPDAGATVRRVYRALVMFPRAADPVEVDALIEGIASSLRSNVGSALITRSEGSLMGPGAKAGEAGAVLEADFPTIEDAMSALNATDFQDVKARTEALGSTIFLFEVREV
Ga0310888_109825252	3300031538	Soil	PRMAVPRRYCARVYRALVMFPQSADSAQVDALIESIASSFKANARSQPITRSEGSLMGPGARTGAASCIFEADFATLEDALTALDADDFQEAKTSVEGLGSTIFLFEVRDV
Ga0310887_100179592	3300031547	Soil	MFPKSADPTEVDALIERIASSFKASAGSQPITRSDGALMGPGARAGEAGCIFEADFATLEDAMTALGADDFQETKTSTEELGSTIFLFELREV
Ga0310886_106281862	3300031562	Soil	VYRALVIFPKSAGPVEVDALIEGIASSFKASAGSQLITRSVGSLMGPGAKAGEAGWILEADFPTLEAAMTALDAEDFQDVKATTETLTSTIFLF
Ga0302321_1005744771	3300031726	Fen	ASTRVARAIDAHRRRDADCDATIGRMYRALVMFPTSAGQAGVEALIEGIASSFKANAGSQSITRSVGSLMGPGAQAGEAGWILEADFSTLEDAMTALNAEDFSDIKANAETLTSTIFLFEVQEV
Ga0302321_1010554862	3300031726	Fen	MYRALVMFPKSASPAEVDTLIEGIASSFTASAGFQAITRSVGALMGPGAQSGDVGWILEADFASLEDVLAALHSDTFSDVRAGTESLGTTIFLFENATV
Ga0302321_1014335601	3300031726	Fen	MFPKSASPVEVAALIEGIAASFTASAGLQAITRSAGALMGPGAKAGDVGWILEADFASLDDVMAALRAEGFQDVKAATESVGTTIFLFESTTV
Ga0310904_106768552	3300031854	Soil	MFPKSADPTEVDALIERIASSFKASAGSQPITRSDGALMGPGARAGEAGCIFEADFATLEDAMTALGADDFQEAKTSTEELGSTIFLFELREV
Ga0310892_108796931	3300031858	Soil	KSAGPVEVDALIEGIASSFKASAGSQLITRSVGSLMGPGAKAGAASCIFEADFPTLEDAMTALDAEDFQDVKVTTETLGSTIFLFEVREV
Ga0315280_104133902	3300031862	Sediment	PVDVDTLIEGIASSFKASAGSLSITRSAGALMGPGAKVGEAGWILEADFATLDDAMAALQAEAFQDVKATTESLGTTIFLFEFQDV
Ga0302322_1037672561	3300031902	Fen	AAPSDEVDALIQGIADSFRASSGFQAITRSLGALMGPGARVGDVGAILEADFASLEDVMAALHDESFHDVKEATEALGTTIFLFECTRA
Ga0311367_102371181	3300031918	Fen	HMARAINALVGAEIPTATYDRRMYRALVMFPKSAGPAEVEALIESIASSFKANTGSQPITRSVGSLMGPGAQAGEAGWILEADFSTLEDAMTALNAEDFSDIKANAETLTSTIFLFEVQE
Ga0311367_118603482	3300031918	Fen	MYRALVMFPKSASPVEVAALIEGIAASFTASAGLQAITRSAGALMGPGAKAGDVGWILEADFASLDDVMAALRAEGFQDVKAATESVGTTIFLFEFTNV
Ga0310901_105700581	3300031940	Soil	DPTEVDALIERIASSFKASAGSQPITRSDGALMGPGARAGEAGCIFEADFATLEDAMTALGADDFQETKTSTEELGSTIFLFELREV
Ga0310897_106917221	3300032003	Soil	MFPKSAGPAEVDALIEGIASSFKASAGSQSITRSVGSLMGPGAKAGEAGWILEADFPTLEDAMTALHADDFQSAKTTTEMLGSTIFLFEVQEL
Ga0310902_105724421	3300032012	Soil	VYRALVIFPKSVDPVEVDALIEGIASSFKASAGSQPITRSVGSLMGPGAKAGEAGWILEADFPTLEDAMTALHAEDFQDAKACTEALGSTIFLFEVREV
Ga0310899_101826992	3300032017	Soil	DALIERIASSFKASAGSQPITRSDGALMGPGARAGEAGCIFEADFATLEDAMTALGADDFQGAKTSTEELGSTIFLFELREV
Ga0315272_102236784	3300032018	Sediment	PMFRTLVMFPKSASPVDVDTLIEGIASSFKASAGSLSITRSAGALMGPGAKVGEAGWILEADFATLDDAMAALQAEAFQDVKATTESLGTTIFLFEFQDV
Ga0310890_106856971	3300032075	Soil	MHRVLVMFPKSAGAAQVDALIEDITSSLKASGCSGPITRSVGPLMGPGAHAGEAGWILEADVGTLDDAMTALQADDFQRVKADAESLTSTIFLFEIAEV
Ga0310890_109748371	3300032075	Soil	VYRALVIFPKSVDPVEVDALIEGIASSFKASAGSRPITRSVGSLMGPGAKAGEAGWILEADFPTLEDAMTALDAEDFQDVKAAAETLASTIFLFEVREV
Ga0307415_1001650494	3300032126	Rhizosphere	REQVDELIDAIASSFKASGTRQPITRSVGSLMGPGAQAGEAGWILEADFATLEDAMTALDADDVQEAKATAETLTSTIFLFEVAEV
Ga0315283_101645452	3300032164	Sediment	MYRALVMFPKSASPAEVDTLIEGIVSSFTASSGFQAITRSVGALMGPGARVGEVGWILEADFASLEDVMAALDSETFSDVKAGTESLGTTIFLFESAPV
Ga0315283_118919582	3300032164	Sediment	EGIASSFTASAGFQTITRSASALMGPGAKSGEIGSILEADFASLDDVMAALHAESFHDVKAATESVGTTILLFELTTV
Ga0315271_109302942	3300032256	Sediment	MFPKSASPVDVDTLIEGIASSFKASAGSLSITRSAGALMGPGAKVGEAGWILEADFATLDDAMAALQAEAFQDVKATTESLGTTIFLFEFQDV
Ga0315287_114071382	3300032397	Sediment	MYRALVMFPRSASSAEVDALIEGIASSFTASAGFQTITRSASALMGPGAKSGEIGSILEADFASLDDVMAALHAESFHDVKAATESVGTTILLFELTTV
Ga0247829_102674041	3300033550	Soil	VLFPKSADPVDVDALIEGIASSFKASTGSQPITRSVGSLMGPGAKAGEAGWILEADFPTLEDAMAALHAEDFQDAKASTEALGSTIFLFEVGEV
Ga0247829_107724251	3300033550	Soil	MFPQSAGPVEVDALIEGIASSFKASAGSQPITRSVGSLMGPGAKAGEAGWILEADFPTLEDAMTALDAEDFQDVKAATETLASTIFLFEVREV
Ga0370493_0224588_3_284	3300034129	Untreated Peat Soil	MFPKSASAVEVEALIEGIASSFTASPGFRAVTRSTGALMGPGARDGDVGAILEADFASLDDVLAALHAEDFHDVKVATESLGTTIFLFEVTTA
Ga0314783_153778_76_408	3300034662	Soil	VPADAGRYILRVYRTLVMFPKSADAVEVDALIERIAASFTASAASLPITRNEGSLMGPGARAGEAGWILEADFRTLDDAMTALHAEDFQDAKARTETLGSTIFLFEVREV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084126

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences