NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F084088

Metagenome Family F084088

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F084088
Family Type Metagenome
Number of Sequences 112
Average Sequence Length 52 residues
Representative Sequence MNQSVEAILEQADIYGLRSEVRATAMAIVRENPSLPTGSAYMQAAYEWDIL
Number of Associated Samples 75
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 4.46 %
% of genes near scaffold ends (potentially truncated) 11.61 %
% of genes from short scaffolds (< 2000 bps) 70.54 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction Yes
3D model pTM-score0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (94.643 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(28.571 % of family members)
Environment Ontology (ENVO) Unclassified
(67.857 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(90.179 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 46.84%    β-sheet: 0.00%    Coil/Unstructured: 53.16%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.77
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.388.1.1: Filoviridae VP35d3fkea_3fke0.71412
e.22.1.2: Iron-containing alcohol dehydrogenased1vlja11vlj0.70688
e.22.1.2: Iron-containing alcohol dehydrogenased1oj7a11oj70.68747
c.37.1.20: Extended AAA-ATPase domaind1fnna21fnn0.68498
e.22.1.0: automated matchesd5yvra15yvr0.67746


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF06067DUF932 37.50
PF04308RNaseH_like 33.93
PF04965GPW_gp25 1.79
PF06414Zeta_toxin 0.89
PF13439Glyco_transf_4 0.89



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A94.64 %
All OrganismsrootAll Organisms5.36 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000115|DelMOSum2011_c10007116Not Available6273Open in IMG/M
3300001778|ACM18_1059873All Organisms → cellular organisms → Bacteria736Open in IMG/M
3300001846|ACM22_1022133Not Available516Open in IMG/M
3300005074|Ga0070431_1010771Not Available5307Open in IMG/M
3300005097|Ga0072505_1362893Not Available578Open in IMG/M
3300005097|Ga0072505_1377756Not Available633Open in IMG/M
3300006737|Ga0098037_1206797Not Available641Open in IMG/M
3300006802|Ga0070749_10022437All Organisms → cellular organisms → Bacteria3988Open in IMG/M
3300006802|Ga0070749_10066279All Organisms → cellular organisms → Bacteria2172Open in IMG/M
3300006802|Ga0070749_10141737All Organisms → cellular organisms → Bacteria1402Open in IMG/M
3300006802|Ga0070749_10715263Not Available535Open in IMG/M
3300006919|Ga0070746_10003722Not Available9039Open in IMG/M
3300006919|Ga0070746_10025588Not Available3211Open in IMG/M
3300006919|Ga0070746_10260392Not Available807Open in IMG/M
3300006919|Ga0070746_10343743Not Available678Open in IMG/M
3300006919|Ga0070746_10359724Not Available658Open in IMG/M
3300007344|Ga0070745_1000809Not Available18060Open in IMG/M
3300007538|Ga0099851_1012844Not Available3418Open in IMG/M
3300007538|Ga0099851_1014563Not Available3206Open in IMG/M
3300007538|Ga0099851_1022280Not Available2560Open in IMG/M
3300007538|Ga0099851_1043674Not Available1769Open in IMG/M
3300007538|Ga0099851_1127105Not Available960Open in IMG/M
3300007539|Ga0099849_1337254Not Available538Open in IMG/M
3300007541|Ga0099848_1344911Not Available502Open in IMG/M
3300007542|Ga0099846_1215067Not Available674Open in IMG/M
3300007557|Ga0102821_1160503Not Available572Open in IMG/M
3300007558|Ga0102822_1085994Not Available741Open in IMG/M
3300007640|Ga0070751_1083643Not Available1338Open in IMG/M
3300008116|Ga0114350_1000255Not Available45375Open in IMG/M
3300008996|Ga0102831_1146983Not Available782Open in IMG/M
3300008999|Ga0102816_1282993Not Available526Open in IMG/M
3300009001|Ga0102963_1095563Not Available1212Open in IMG/M
3300009086|Ga0102812_10326470Not Available835Open in IMG/M
3300012920|Ga0160423_10003089Not Available13877Open in IMG/M
3300012920|Ga0160423_10012205Not Available6649Open in IMG/M
3300012920|Ga0160423_10026199Not Available4343Open in IMG/M
3300012920|Ga0160423_10059758Not Available2747Open in IMG/M
3300012920|Ga0160423_10265586Not Available1185Open in IMG/M
3300012920|Ga0160423_10335586Not Available1038Open in IMG/M
3300012920|Ga0160423_11035904Not Available549Open in IMG/M
3300017706|Ga0181377_1065220Not Available669Open in IMG/M
3300017708|Ga0181369_1028994All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium1311Open in IMG/M
3300017719|Ga0181390_1011828Not Available3036Open in IMG/M
3300017719|Ga0181390_1123639Not Available672Open in IMG/M
3300017724|Ga0181388_1047933Not Available1034Open in IMG/M
3300017751|Ga0187219_1150594Not Available670Open in IMG/M
3300017786|Ga0181424_10124836Not Available1109Open in IMG/M
3300017950|Ga0181607_10001587Not Available20289Open in IMG/M
3300017985|Ga0181576_10289433Not Available1046Open in IMG/M
3300020051|Ga0181555_1098901Not Available1295Open in IMG/M
3300020165|Ga0206125_10124483Not Available1062Open in IMG/M
3300020175|Ga0206124_10292554Not Available623Open in IMG/M
3300020185|Ga0206131_10000587Not Available49985Open in IMG/M
3300020185|Ga0206131_10002748Not Available20909Open in IMG/M
3300020392|Ga0211666_10041587Not Available2008Open in IMG/M
3300020403|Ga0211532_10095290Not Available1283Open in IMG/M
3300020404|Ga0211659_10047775Not Available2033Open in IMG/M
3300020408|Ga0211651_10012962Not Available4247Open in IMG/M
3300020414|Ga0211523_10428359Not Available533Open in IMG/M
3300020437|Ga0211539_10242302Not Available743Open in IMG/M
3300020438|Ga0211576_10071462Not Available1948Open in IMG/M
3300020442|Ga0211559_10007065Not Available5971Open in IMG/M
3300020462|Ga0211546_10206824Not Available974Open in IMG/M
3300020469|Ga0211577_10128076Not Available1731Open in IMG/M
3300020469|Ga0211577_10276526Not Available1072Open in IMG/M
3300020469|Ga0211577_10823057Not Available532Open in IMG/M
3300020474|Ga0211547_10227468Not Available954Open in IMG/M
3300021335|Ga0213867_1011362Not Available3758Open in IMG/M
3300021347|Ga0213862_10010894Not Available3521Open in IMG/M
3300021347|Ga0213862_10132375Not Available877Open in IMG/M
3300021347|Ga0213862_10246560Not Available630Open in IMG/M
3300021368|Ga0213860_10205520Not Available867Open in IMG/M
3300021373|Ga0213865_10003277Not Available9983Open in IMG/M
3300021425|Ga0213866_10103090Not Available1554Open in IMG/M
3300021957|Ga0222717_10153658Not Available1399Open in IMG/M
3300021958|Ga0222718_10036119Not Available3257Open in IMG/M
3300021958|Ga0222718_10183092Not Available1156Open in IMG/M
3300021958|Ga0222718_10186796Not Available1141Open in IMG/M
3300021964|Ga0222719_10823792Not Available508Open in IMG/M
3300022063|Ga0212029_1051069Not Available599Open in IMG/M
3300022068|Ga0212021_1078819Not Available676Open in IMG/M
3300022068|Ga0212021_1105653Not Available577Open in IMG/M
3300022176|Ga0212031_1002616Not Available1991Open in IMG/M
3300022176|Ga0212031_1023828Not Available965Open in IMG/M
3300022198|Ga0196905_1084736Not Available860Open in IMG/M
3300022198|Ga0196905_1133225Not Available646Open in IMG/M
3300022407|Ga0181351_1217059Not Available624Open in IMG/M
3300024239|Ga0247724_1006190Not Available1836Open in IMG/M
3300025120|Ga0209535_1017378Not Available3751Open in IMG/M
3300025127|Ga0209348_1104705Not Available875Open in IMG/M
3300025127|Ga0209348_1217487Not Available524Open in IMG/M
3300025646|Ga0208161_1065796Not Available1096Open in IMG/M
3300025674|Ga0208162_1001244Not Available13530Open in IMG/M
3300025769|Ga0208767_1030227Not Available2811Open in IMG/M
3300025889|Ga0208644_1023377Not Available3847Open in IMG/M
3300025889|Ga0208644_1048322Not Available2379Open in IMG/M
3300026187|Ga0209929_1071788Not Available941Open in IMG/M
3300027191|Ga0208021_1042746Not Available680Open in IMG/M
3300027406|Ga0208965_1053704Not Available887Open in IMG/M
3300029293|Ga0135211_1030791Not Available648Open in IMG/M
3300029293|Ga0135211_1052570Not Available513Open in IMG/M
3300029293|Ga0135211_1052971Not Available511Open in IMG/M
3300029293|Ga0135211_1054733Not Available501Open in IMG/M
3300029301|Ga0135222_1009684Not Available724Open in IMG/M
3300029301|Ga0135222_1013141Not Available650Open in IMG/M
3300029301|Ga0135222_1022959Not Available525Open in IMG/M
3300029308|Ga0135226_1028734Not Available562Open in IMG/M
3300029345|Ga0135210_1009934Not Available844Open in IMG/M
3300029345|Ga0135210_1029418All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → unclassified Winogradskyella → Winogradskyella sp.596Open in IMG/M
3300031758|Ga0315907_11077598Not Available573Open in IMG/M
3300032277|Ga0316202_10009098Not Available5216Open in IMG/M
3300034418|Ga0348337_143073Not Available690Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous28.57%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine11.61%
Marine HarborEnvironmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor8.93%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater6.25%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater6.25%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine5.36%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine5.36%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water4.46%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater4.46%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater3.57%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh2.68%
Marine Benthic Sponge Stylissa Massa AssociatedHost-Associated → Porifera → Unclassified → Unclassified → Unclassified → Marine Benthic Sponge Stylissa Massa Associated2.68%
Marine PlanktonEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton1.79%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water1.79%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake0.89%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton0.89%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater0.89%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat0.89%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.89%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine0.89%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment0.89%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000115Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011EnvironmentalOpen in IMG/M
3300001778Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM18, ROCA_DNA027_0.2um_3gEnvironmentalOpen in IMG/M
3300001846Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM22, ROCA_DNA119_0.2um_25bEnvironmentalOpen in IMG/M
3300005074Marine benthic sponge Stylissa massa associated microbial communities from Guam, USAHost-AssociatedOpen in IMG/M
3300005097MiSeq S massa metagenomeHost-AssociatedOpen in IMG/M
3300006737Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007557Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.715EnvironmentalOpen in IMG/M
3300007558Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.733EnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300008116Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NAEnvironmentalOpen in IMG/M
3300008996Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747EnvironmentalOpen in IMG/M
3300008999Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545EnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009086Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713EnvironmentalOpen in IMG/M
3300012920Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaGEnvironmentalOpen in IMG/M
3300017706Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaGEnvironmentalOpen in IMG/M
3300017708Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaGEnvironmentalOpen in IMG/M
3300017719Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21EnvironmentalOpen in IMG/M
3300017724Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017786Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 47 SPOT_SRF_2013-09-18EnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017985Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300020051Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011504AT metaG (spades assembly)EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020175Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2EnvironmentalOpen in IMG/M
3300020185Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1EnvironmentalOpen in IMG/M
3300020392Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX555916-ERR599163)EnvironmentalOpen in IMG/M
3300020403Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)EnvironmentalOpen in IMG/M
3300020404Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)EnvironmentalOpen in IMG/M
3300020408Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX555963-ERR599118)EnvironmentalOpen in IMG/M
3300020414Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)EnvironmentalOpen in IMG/M
3300020437Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020442Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)EnvironmentalOpen in IMG/M
3300020462Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)EnvironmentalOpen in IMG/M
3300020469Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)EnvironmentalOpen in IMG/M
3300020474Marine prokaryotic communities collected during Tara Oceans survey from station TARA_151 - TARA_B100001564 (ERX555957-ERR598976)EnvironmentalOpen in IMG/M
3300021335Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540EnvironmentalOpen in IMG/M
3300021347Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266EnvironmentalOpen in IMG/M
3300021368Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550EnvironmentalOpen in IMG/M
3300021373Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282EnvironmentalOpen in IMG/M
3300021425Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300021958Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022063Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300022176Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300024239Subsurface sediment microbial communities from gas well in Oklahoma, United States - OK STACK MC-2-EEnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025127Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)EnvironmentalOpen in IMG/M
3300025646Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300026187Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300027191Estuarine microbial communities from the Columbia River estuary - metaG S.737 (SPAdes)EnvironmentalOpen in IMG/M
3300027406Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_07_M0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300029293Marine harbor viral communities from the Indian Ocean - SCH2EnvironmentalOpen in IMG/M
3300029301Marine harbor viral communities from the Indian Ocean - SRH1EnvironmentalOpen in IMG/M
3300029308Marine harbor viral communities from the Indian Ocean - SRB2EnvironmentalOpen in IMG/M
3300029345Marine harbor viral communities from the Indian Ocean - SCH1EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300032277Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotiteEnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2011_1000711673300000115MarineMDNLDKMTVEMILEQAQMYGLRAEVRATAMAFIKDDPKLNTGSAYTQAAYEWDVL*
ACM18_105987323300001778Marine PlanktonMTVEMILEQADIYGLRSEVRSTAMAFIKDNPHLGMGSAYTQAAYEWDIL*
ACM22_102213313300001846Marine PlanktonVEMILEQADIYGLRSEVRSTAMAFIKDNPHLGMGSAYTQAAYEWDIL*
Ga0070431_101077193300005074Marine Benthic Sponge Stylissa Massa AssociatedMKKDVAIIEMILEQADIYGLRCEVRSTAMAFMKDNPHLSSGSAYTQAAYEWDIL*
Ga0072505_136289323300005097Marine Benthic Sponge Stylissa Massa AssociatedMIMEQADIYGLRSEVRATAMAIAKENPTISTGSAYAMAAYEWDIL*
Ga0072505_137775623300005097Marine Benthic Sponge Stylissa Massa AssociatedMIMEQADIYGLRAEVRAEAMAIIKENPTIDTGSAYAMAAYEWDIL*ILEL*
Ga0098037_120679723300006737MarineMNETIEMVMEQASIYGLRSEVRAEAMAILRENPTIKTGSAYMQA
Ga0070749_1002243773300006802AqueousMNQSVEAILEQADIYGLRSEVRATAMAIVRENPSLPTGSAYLMAAQEWDIL*
Ga0070749_1006627953300006802AqueousMERSMTVEMILEQAEIYGLRSEVRSTAMAFIKDNPHLGMGSAYTQAAYEWDIL*
Ga0070749_1014173723300006802AqueousMNITQEINSAPQVEAILEQADIYGLRSEVRATAMAIIRENPFLPTGSAYMMAAQEWDVL*
Ga0070749_1071526313300006802AqueousMHQMQERSQSVEAILEQADIYGLRSEVRSTAMAIIRENPSLPTGSAYMMAAQEWDIL*
Ga0070746_1000372293300006919AqueousMNQSIEAILEQADIYGLRSEVRAEAMAILRENPTLPTGSAYMRAAQEWDVL*
Ga0070746_1002558823300006919AqueousMNQSVEAILEQADIYGLRSEVRATAMAIVRENPSLPTGSAYMMAAQEWDVL*
Ga0070746_1026039213300006919AqueousMTVEMILEQAEIYGLRSEVRSTAMAFIKDNPHLGMGSAYTQAAYEWDIL*
Ga0070746_1034374313300006919AqueousAILEQADIYGLRSEVRATAMAIVRENPSLPTGSAYLMAAQEWDIL*
Ga0070746_1035972413300006919AqueousMENKDKMTIEMILEQAEVFGLRAEVRATAMAFIQENPELGTGSAYTQAAYEWDVL*
Ga0070745_1000809123300007344AqueousMMERSMTVEMILEQAEIYGLRSEVRSTAMAFIKDNPHLGMGSAYTQAAYEWDIL*
Ga0099851_101284473300007538AqueousMNITQEMNQLPRVEAILEQADLYDLRSEVRATAMAIIRENPTMDTGSAYMAAAMEWDVL*
Ga0099851_101456353300007538AqueousMNITQEINSAPQVEAILEQADIYGLRSEVRATAMAIIRENPSLPTGSAYMMAAQEWDVL*
Ga0099851_102228023300007538AqueousMNQSVEAILEQADIYGLRSEVRATAMAIVRENPTLNTGSAYLMAAQEWDIL*
Ga0099851_104367443300007538AqueousMNQSVEAILEQADIYGLRMEVRSTAMALIRENPTLNTGSAYMMAAQEWDVL*
Ga0099851_112710523300007538AqueousMNQSIEMIMEQADLYGLRSEVRATAMAIIKNDPTIPTGSAYAQAAYEWDIF*
Ga0099849_133725423300007539AqueousMNETIEMVMEQASIYGLRSEVRAEAMAISRENPNLNTGSAYMQAAYEWDVL*
Ga0099848_134491113300007541AqueousMNITQEMNQLPRVEAILEQADLYGLRSEVRATAMAIIRENPTMDTGSAYMAAAMEWDVL*
Ga0099846_121506733300007542AqueousILEQADVYGLRSEVRATAIAIVRENPSLPTGSAYMMAAQEWDVL*
Ga0102821_116050323300007557EstuarineVENKDKMTVEMILEQAQVYGLRAEVRATAIAFIQDNPRLNTGSAYAQAAHEWDVL*
Ga0102822_108599423300007558EstuarineMEIKDKMTVEMILEQAQVYGLRAEVRATAIAFIQDNPRLNTGSAYAQAAHEWDVL*
Ga0070751_108364333300007640AqueousMNQSIEAILEQADIYGLRSEVRAEAMAILRENPTLNTGSAYMMAAQEWDIL*
Ga0114350_1000255463300008116Freshwater, PlanktonMNPVYEINQMNSVEAILEQADIYGLRAEVMACAIALVRQNPLLPTGSAYMMAALEWDVL*
Ga0102831_114698313300008996EstuarineMEIKDKMTVEMILEQAQVYGLRAEVRATAIAFIQDNPRLNTGSAYTQAAHEWDVL*
Ga0102816_128299323300008999EstuarineMDQTIQTILEQADIYGLRSEVRAEAMAILRENPTLATGSAYQRAALEWDVL*
Ga0102963_109556353300009001Pond WaterMNQTVETILEQADIYGLRSEVRATAMAIVRENPSLPTGSAYMMAAQEWDVL*
Ga0102812_1032647023300009086EstuarineMEIKDKMTVEMILEQAQVYGLRAEVRATAIAFIQDNPRLNTGSAYAQAAH
Ga0160423_10003089183300012920Surface SeawaterMNETIEMVMEQADIYGLRSEVRAEAMAILRENPTLKTGSAYIMAAQEWDIL*
Ga0160423_1001220533300012920Surface SeawaterMNQTVEMIMEQADIYGLRAEVRAEAMAIIKENPTIDTGSAYARAAYEWDIL*
Ga0160423_1002619923300012920Surface SeawaterMTKEVAIIETILEQADIYGLRCEVRATALAFMKENPHLGTGSAYTQAAYEWDIL*
Ga0160423_1005975883300012920Surface SeawaterEQADLYGLRSEVRAEAMAILKEDPTVNTGSAYMQAAYEWDIL*
Ga0160423_1026558613300012920Surface SeawaterMNQTIEMIMEQADIYGLRAEVRAEAMAIIKENPTIDTGSAYAMAAHEWDIL*
Ga0160423_1033558643300012920Surface SeawaterMNQTIEAIMEQADIYGLRSEVRAEAMAILRENPNLNTGSAYMRAAQEWDVL*
Ga0160423_1103590423300012920Surface SeawaterMSQNIEMIMEQAELYGLRGEVRATAIAILKEDPTVTTGSAYAQAAYEWDIF*
Ga0181377_106522023300017706MarineMDQTIQTILEQADIYGLRSEVRAEAMAILRENPTLATGSAYTMAAHEWDIL
Ga0181369_102899423300017708MarineMSKSIEMIMEQADIYGLRGEVRATAMAIIKEDPTVTTGSAYAMAAYEWDIF
Ga0181390_101182823300017719SeawaterMDQTIQTILEQADIYGLRSEVRAEAMAILRENPTLSSGSAYTMAAYEWDIL
Ga0181390_112363913300017719SeawaterMDQTIQTILEQADIYGLRSEVRAEAMAILRENPTLATGSAYQRAALEWDIL
Ga0181388_104793323300017724SeawaterMNQPIQTIQTILEQADIYGLRSEVRAEAMAILRENPTLSSGSAYTMAAYEWDIL
Ga0187219_115059413300017751SeawaterMDQTIQTILEQADIYGLRSEVRAEAMAILKENPTVTTGSAYAMAAYEWDIL
Ga0181424_1012483643300017786SeawaterMDQTIQTILEHADIYGLRSEVRAEAMAILRENPTLATGSAYQRAALEWDVL
Ga0181607_1000158753300017950Salt MarshMIERSMTVEMILEQAEIYGLRSEVRSTAMAFIKDNPHLGMGSAYTQAAYEWDIL
Ga0181576_1028943313300017985Salt MarshMTVEMILEQAEIYGLRSEVRSTAMAFIKDNPHLGMGSAYTQAAYEWDIL
Ga0181555_109890133300020051Salt MarshMDSIGIILEQAEVFGLRGEVRATAMAIIKDNPELDSGSAYAQAAYEWDIL
Ga0206125_1012448323300020165SeawaterMDQTIQTILEQADIYGLRSEVRAEAMAILRENPTLATGSAYQMAALEWDVL
Ga0206124_1029255423300020175SeawaterMDQTIQTILEQADIYGLRSEVRAEAMAILRENPTLATGSAYTRAAHEWDIL
Ga0206131_10000587563300020185SeawaterMKSKDQMTVEMILEQAQVYGLRAEVRATAMAFIKDDPKLNTGSAYTQAAYEWDVL
Ga0206131_10002748143300020185SeawaterMDNPDKMTVEMILEQAQVYGLRAEVRATAMAFIKDDPKLNTGSAYTQAAYEWDVL
Ga0211666_1004158733300020392MarineMNNQSIDIIMEQAGIYGLRGEVRATAMAILKEDPTVSTGSAYAQAAYEWDIF
Ga0211532_1009529023300020403MarineMDRTIEIIMEQAGIYGLRGEVRATAMAIVKEDPTISTGSAYTMAAYEWDIL
Ga0211659_1004777523300020404MarineMNQTIEMIMEQADIYGLRGEVRATAMAIIKEDPTVNTGSAYTQAAYEWDIL
Ga0211651_1001296253300020408MarineMQTIEAILEQADLYGLRSEVRAEAMAILKEDPTVNTGSAYMKAAYEWDVL
Ga0211523_1042835913300020414MarineMDQTIEMIMEQAGIYGLRGEVRATAMAIVKEDPTISTGSAYTMAAYEWDIL
Ga0211539_1024230223300020437MarineMNQTIEMIMEQADIYGLRGEVRATAMAIVKEDPTISTGSAYAMAAYEWDIL
Ga0211576_1007146223300020438MarineMDQTIQTILEQADIYGLRSEVRAEAMAILRENPTLATGSAYQRAALEWDVL
Ga0211559_10007065123300020442MarineMNQTVEAIMEQADIYGLRNEVRAEAMAILRENPNLNTGSAYMQAAYEWDVL
Ga0211546_1020682423300020462MarineMNPTIQIILEQADIYGLRSEVRAEAMAILKENPTLTTGSAYAMAAYEWDIL
Ga0211577_1012807623300020469MarineMTKEVAIIENILEQADIYGLRCEVRATALAFIKENPHLGTGSAYTQAAYEWDIL
Ga0211577_1027652623300020469MarineMGTTNNMTIEMILEQADAYDLRSEVRSTALAFIKENPKLRIGSAYTQAAYEWDVL
Ga0211577_1082305723300020469MarineMENKDKMTVEMILEQAQMYGLRAEVRATAMAFIQENPELGTGSAYTQAAYEWDVL
Ga0211547_1022746823300020474MarineMKNQTIEMVMEQADIYGLRGEVRATAMAIIKDNPTVSTGSAYAMAAYEWDIM
Ga0213867_101136223300021335SeawaterMTIEMILEQAEVFGLRAEVRATAMAFIQENPELGTGSAYTQAAYEWDVL
Ga0213862_1001089453300021347SeawaterMNETIEMVMEQASIYGLRSEVRAEAMAILRENPTLKTGSAYMQAAYEWDIL
Ga0213862_1013237523300021347SeawaterMKKEMAIIETILDQADVYGLRCEVRSTAMAFIKENPALEQGKAYTQAAYEWDIL
Ga0213862_1024656023300021347SeawaterMENKDKMTVEMILEQAQVYGLRAEVRATAMAFIQENPELGTGSAYTQAAYEWDVL
Ga0213860_1020552033300021368SeawaterMNQTIEMIMEQADIYGLRGEVRATAMAIIKDDPTINTGSAYAQAAYEWDIL
Ga0213865_1000327733300021373SeawaterMAIIETILDQADVYGLRCEVRSTAMAFIKDNPHLGMGSAYTQAAYEWDIL
Ga0213866_1010309023300021425SeawaterMKKEMAIIETILDQADVYGLRCEVRSTAMAFIKDNPHLGMGSAYTQAAYEWDIL
Ga0222717_1015365813300021957Estuarine WaterMEIKDKMTVEMILEQAQVYGLRAEVRATAIAFIQDNPRLNTGSAYAQAAHEWDVL
Ga0222718_1003611933300021958Estuarine WaterMSMDKNIGMILEQAELYGLRGEVRATAMAIIKDNPELDSGSAYAQAAYEWDIF
Ga0222718_1018309233300021958Estuarine WaterMNQSIEAILEQADIYGLRSEIRAEAMAILRENPSLNTGSAYIMAAQEWDVL
Ga0222718_1018679623300021958Estuarine WaterMNQSVEAILEQADIYGLRSEVRATAMAIVRENPTLNTGSAYLMAAQEWDIL
Ga0222719_1082379223300021964Estuarine WaterMNITQEMNQLPRVEAILEQADLYGLRSEVRATAMAIIRENPTMDTGSAYMEAAMEWDVL
Ga0212029_105106913300022063AqueousMNITQEMNQLPRVEAILEQADLYDLRSEVRATAMAIIRENPTMDTGSAYMAAAMEWDVL
Ga0212021_107881923300022068AqueousMNQSVEAILEQADIYGLRSEVRATAMAIVRENPSLPTGSAYMQAAYEWDIL
Ga0212021_110565323300022068AqueousMNQSIEAILEQADIYGLRSEVRAEAMAILRENPTLPTGSAYMRAAQEWDVL
Ga0212031_100261613300022176AqueousLEQADLYGLRSEVRATAMAIIRENPTMDTGSAYMAAAMEWDVL
Ga0212031_102382833300022176AqueousMNQSVEAILEQADIYGLRMEVRSTAMALIRENPTLNTGSAYMMAAQEWDVL
Ga0196905_108473623300022198AqueousMNQSVEAILEQADIYGLRSEVRATAMAIVRENPSLPTGSAYMMAAQEWDVL
Ga0196905_113322543300022198AqueousIMNITQEMNQLPRVEAILEQADLYDLRSEVRATAMAIIRENPTMDTGSAYMAAAMEWDVL
Ga0181351_121705943300022407Freshwater LakeMNPVYEINQMNSVEAILEQADIYGLRAEVMACAIALVRQNPLLPTGSAYMMAALEWDVLX
Ga0247724_100619053300024239Deep Subsurface SedimentMNPVYEINQMNSVEAILEQADIYGLRAEVMACAIALVRQNPLLPTGSAYMMAALEWDVL
Ga0209535_1017378103300025120MarineHMDQTIQTILEQADIYGLRSEVRAEAMAILRENPTLATGSAYQRAALEWDVL
Ga0209348_110470523300025127MarineMRNQTIEMVMEQADIYGLRGEVRATAMAIIKDDPTISTGSAYAMAAYEWDIL
Ga0209348_121748713300025127MarineMNQTIEMIMEQADIYGLRSEVRATAMAIVKEDPTISTGSAYARAAYEWDIL
Ga0208161_106579623300025646AqueousMNITQEINSAPQVEAILEQADIYGLRSEVRATAMAIIRENPFLPTGSAYMMAAQEWDVL
Ga0208162_1001244173300025674AqueousMNQSIEMIMEQADLYGLRSEVRATAMAIIKNDPTIPTGSAYAQAAYEWDIF
Ga0208767_103022723300025769AqueousMMERSMTVEMILEQAEIYGLRSEVRSTAMAFIKDNPHLGMGSAYTQAAYEWDIL
Ga0208644_102337753300025889AqueousMNQSVEAILEQADIYGLRSEVRATAMAIVRENPSLPTGSAYLMAAQEWDIL
Ga0208644_104832253300025889AqueousMERSMTVEMILEQAEIYGLRSEVRSTAMAFIKDNPHLGMGSAYTQAAYEWDIL
Ga0209929_107178843300026187Pond WaterMNQTVETILEQADIYGLRSEVRATAMAIVRENPSLPTGSAYMMAAQEWDVL
Ga0208021_104274623300027191EstuarineMEIKDKMTVEMILEQAQVYGLRAEVRATAIAFIQDNPRLNTGSAY
Ga0208965_105370423300027406MarineMEIKDKMTVEMILEQAQVCGLRAEVRATAIAFIQDNPRLNTGSAYAQAAHEWDVL
Ga0135211_103079123300029293Marine HarborFPSHDQSEFNNMNQTVEAIMEQADIYGLRSEVRAEAMAIMRENPNITTGSAYMRAAYEWDVL
Ga0135211_105257023300029293Marine HarborMSQSIEMIMEQAELYGLRSEVRATAMAIIKEDPTMNTGSAYAQAAYEWDIF
Ga0135211_105297123300029293Marine HarborMNSSKDRITTILEYADYWGLRSEVQATAMAIIKEGNTNTETAYTQAAHEWDVL
Ga0135211_105473313300029293Marine HarborMSKDMAIIEMILEQADIYGLRCEVRSTAMAFMKENPELGTGSAYTQAAYEWDIL
Ga0135222_100968423300029301Marine HarborLPAPPNYKIDKMNQTIEAIMEQADIYGLRSEVRAEAMAILRENPNLNTGSAYMQAAYEWDVL
Ga0135222_101314143300029301Marine HarborMSQSIEMIMEQAELYGLRGEVRATAIAILKEDPTATTGSAYAQAAYEWDIF
Ga0135222_102295913300029301Marine HarborMDQTIEMIMEQAGIYGLRGEVRATAMAIIKEDPTIPTGSAYAMAAYEWDIL
Ga0135226_102873413300029308Marine HarborMDQTIEMIMEQAGIYGLRGEVRATAMAIVKEDPTISTGSAYAMAAYEWDIL
Ga0135210_100993443300029345Marine HarborMSMNKNIGVILEQAELYGLRGEVRATAMAIIKDNPELDSGSAYAQAAYEWDIF
Ga0135210_102941833300029345Marine HarborMNQSVEAILEQADIYGLRSEVRATAMALVRENPSLPTGSAYMMAAQEWDVL
Ga0315907_1107759813300031758FreshwaterMNPVYEINQMNSVEAILEQADIYGLRAEVMACAIALVRQNPLLPTGSAYMMAALE
Ga0316202_10009098123300032277Microbial MatMDNIGIILEQAEVFGLRGEVRATAIAIIKDNPELDSGSAYAQAAYEWDIL
Ga0348337_143073_433_5883300034418AqueousMNQSIEAILEQADIYGLRSEVRAEAMAILRENPTLNTGSAYMMAAQEWDIL


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