Metagenome / Metatranscriptome Family F084077

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084077
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	85 residues
Representative Sequence	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA
Number of Associated Samples	97
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.36 %
% of genes near scaffold ends (potentially truncated)	35.71 %
% of genes from short scaffolds (< 2000 bps)	85.71 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.643 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.071 % of family members)
Environment Ontology (ENVO)	Unclassified (51.786 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (72.321 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.41% β-sheet: 29.55% Coil/Unstructured: 67.05%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF05378	Hydant_A_N	22.32
PF00196	GerE	14.29
PF01494	FAD_binding_3	8.04
PF03976	PPK2	3.57
PF13450	NAD_binding_8	2.68
PF00501	AMP-binding	1.79
PF02538	Hydantoinase_B	1.79
PF00296	Bac_luciferase	0.89
PF00440	TetR_N	0.89
PF00999	Na_H_Exchanger	0.89
PF03061	4HBT	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	44.64
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	16.07
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	8.04
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	8.04
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	8.04
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	3.57
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	3.57
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.89
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.89
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.89
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.89
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.89
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.64 %
Unclassified	root	N/A	30.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.64 %
Unclassified	root	N/A	30.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.64 %
Unclassified	root	N/A	30.36 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	58.93 %
Unclassified	root	N/A	30.36 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	58.93 %
Unclassified	root	N/A	30.36 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	57.14 %
Unclassified	root	N/A	30.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.36 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	15.18 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.57 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	3.57 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.36 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	14.29 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.57 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	3.57 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.89 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.36 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3.57 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	3.57 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	1.79 %
Kocuria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Kocuria	0.89 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.89 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.36 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	3.57 %
Streptomyces antimycoticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces antimycoticus	2.68 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	1.79 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.89 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	0.89 %
Kocuria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Kocuria	0.89 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.36 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	3.57 %
Streptomyces antimycoticus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces antimycoticus	2.68 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	1.79 %
Pseudonocardia sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp.	0.89 %
Streptomyces sp. CNR698	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNR698	0.89 %
Kocuria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Kocuria	0.89 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725000\|GPWRP_F5MPXY302IXAFV	Not Available	519	Open in IMG/M
3300001990\|JGI24737J22298_10138634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces antimycoticus	718	Open in IMG/M
3300002568\|C688J35102_120740060	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300004479\|Ga0062595_100052094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	1880	Open in IMG/M
3300005327\|Ga0070658_10008823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	8105	Open in IMG/M
3300005327\|Ga0070658_10405173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1172	Open in IMG/M
3300005329\|Ga0070683_100646578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1012	Open in IMG/M
3300005330\|Ga0070690_100344641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Kocuria	1080	Open in IMG/M
3300005331\|Ga0070670_100275020	Not Available	1470	Open in IMG/M
3300005334\|Ga0068869_100030538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	3783	Open in IMG/M
3300005336\|Ga0070680_101819304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	528	Open in IMG/M
3300005341\|Ga0070691_10174618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1115	Open in IMG/M
3300005343\|Ga0070687_100330885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	977	Open in IMG/M
3300005344\|Ga0070661_100060956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2768	Open in IMG/M
3300005355\|Ga0070671_100810868	Not Available	815	Open in IMG/M
3300005365\|Ga0070688_100744131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	763	Open in IMG/M
3300005434\|Ga0070709_10856640	Not Available	716	Open in IMG/M
3300005441\|Ga0070700_100015575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	4315	Open in IMG/M
3300005455\|Ga0070663_100903552	Not Available	763	Open in IMG/M
3300005457\|Ga0070662_100124984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp.	1976	Open in IMG/M
3300005466\|Ga0070685_10805943	Not Available	692	Open in IMG/M
3300005539\|Ga0068853_100893758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	853	Open in IMG/M
3300005544\|Ga0070686_101112976	Not Available	653	Open in IMG/M
3300005544\|Ga0070686_101410182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	585	Open in IMG/M
3300005547\|Ga0070693_100307036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1071	Open in IMG/M
3300005563\|Ga0068855_100497478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1325	Open in IMG/M
3300005618\|Ga0068864_101393459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	703	Open in IMG/M
3300005719\|Ga0068861_100134885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2008	Open in IMG/M
3300005840\|Ga0068870_10492374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces antimycoticus	816	Open in IMG/M
3300006028\|Ga0070717_10085635	All Organisms → cellular organisms → Bacteria	2653	Open in IMG/M
3300006755\|Ga0079222_10116596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1444	Open in IMG/M
3300006806\|Ga0079220_10313082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	977	Open in IMG/M
3300006880\|Ga0075429_101108065	Not Available	691	Open in IMG/M
3300006881\|Ga0068865_100638557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	904	Open in IMG/M
3300006881\|Ga0068865_101778672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. CNR698	557	Open in IMG/M
3300006954\|Ga0079219_11111090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	672	Open in IMG/M
3300009174\|Ga0105241_10258788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1478	Open in IMG/M
3300009174\|Ga0105241_10636703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	967	Open in IMG/M
3300009177\|Ga0105248_12927116	Not Available	544	Open in IMG/M
3300009551\|Ga0105238_10025963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	5971	Open in IMG/M
3300010371\|Ga0134125_10365605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1600	Open in IMG/M
3300010373\|Ga0134128_10822021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1030	Open in IMG/M
3300010373\|Ga0134128_11138955	Not Available	861	Open in IMG/M
3300010375\|Ga0105239_10023016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6869	Open in IMG/M
3300010396\|Ga0134126_10496710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1407	Open in IMG/M
3300010399\|Ga0134127_10991186	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300012957\|Ga0164303_11540594	Not Available	504	Open in IMG/M
3300012985\|Ga0164308_10044249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2830	Open in IMG/M
3300012986\|Ga0164304_10463430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	917	Open in IMG/M
3300012987\|Ga0164307_10111502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1734	Open in IMG/M
3300012988\|Ga0164306_10276435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1215	Open in IMG/M
3300013296\|Ga0157374_10104876	All Organisms → cellular organisms → Bacteria	2714	Open in IMG/M
3300013297\|Ga0157378_10342636	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300013297\|Ga0157378_10478124	Not Available	1241	Open in IMG/M
3300013297\|Ga0157378_10625317	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300013306\|Ga0163162_12766348	Not Available	565	Open in IMG/M
3300013308\|Ga0157375_10802242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1090	Open in IMG/M
3300014326\|Ga0157380_10479353	Not Available	1203	Open in IMG/M
3300014968\|Ga0157379_10253718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1597	Open in IMG/M
3300014968\|Ga0157379_10514730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1110	Open in IMG/M
3300017965\|Ga0190266_10022587	Not Available	1870	Open in IMG/M
3300018465\|Ga0190269_10582738	Not Available	751	Open in IMG/M
3300018466\|Ga0190268_10763943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	724	Open in IMG/M
3300018469\|Ga0190270_11732394	Not Available	679	Open in IMG/M
3300018476\|Ga0190274_10603522	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300020082\|Ga0206353_10869576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1094	Open in IMG/M
3300020082\|Ga0206353_11932594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	762	Open in IMG/M
3300025899\|Ga0207642_10106985	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300025900\|Ga0207710_10420950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	687	Open in IMG/M
3300025901\|Ga0207688_10000933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	14776	Open in IMG/M
3300025901\|Ga0207688_10240341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1095	Open in IMG/M
3300025907\|Ga0207645_10122203	Not Available	1691	Open in IMG/M
3300025908\|Ga0207643_10052362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2318	Open in IMG/M
3300025909\|Ga0207705_10453126	Not Available	995	Open in IMG/M
3300025911\|Ga0207654_10528738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	836	Open in IMG/M
3300025921\|Ga0207652_11384994	Not Available	607	Open in IMG/M
3300025923\|Ga0207681_10101387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2077	Open in IMG/M
3300025923\|Ga0207681_11775596	Not Available	515	Open in IMG/M
3300025925\|Ga0207650_11564732	Not Available	560	Open in IMG/M
3300025926\|Ga0207659_10674823	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300025927\|Ga0207687_11208866	Not Available	650	Open in IMG/M
3300025932\|Ga0207690_11808481	Not Available	510	Open in IMG/M
3300025938\|Ga0207704_11636518	Not Available	553	Open in IMG/M
3300025940\|Ga0207691_10048799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	3880	Open in IMG/M
3300025941\|Ga0207711_11945858	Not Available	531	Open in IMG/M
3300025942\|Ga0207689_10563671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	957	Open in IMG/M
3300025944\|Ga0207661_10224488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1661	Open in IMG/M
3300025944\|Ga0207661_11190491	Not Available	701	Open in IMG/M
3300025949\|Ga0207667_11084961	Not Available	784	Open in IMG/M
3300025960\|Ga0207651_10920883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	779	Open in IMG/M
3300025961\|Ga0207712_10619691	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300026067\|Ga0207678_10035276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4356	Open in IMG/M
3300026067\|Ga0207678_11329310	Not Available	636	Open in IMG/M
3300026078\|Ga0207702_10510852	Not Available	1172	Open in IMG/M
3300026089\|Ga0207648_10070399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3049	Open in IMG/M
3300027765\|Ga0209073_10350383	Not Available	596	Open in IMG/M
3300028379\|Ga0268266_10244112	All Organisms → cellular organisms → Bacteria	1658	Open in IMG/M
3300028381\|Ga0268264_10595347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1089	Open in IMG/M
3300028597\|Ga0247820_11088034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	574	Open in IMG/M
3300028704\|Ga0307321_1127737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	530	Open in IMG/M
3300028707\|Ga0307291_1048267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1021	Open in IMG/M
3300028708\|Ga0307295_10135836	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	677	Open in IMG/M
3300028713\|Ga0307303_10074178	Not Available	752	Open in IMG/M
3300028714\|Ga0307309_10091426	Not Available	716	Open in IMG/M
3300028810\|Ga0307294_10128610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	827	Open in IMG/M
3300028872\|Ga0307314_10024090	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300032080\|Ga0326721_10858706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	572	Open in IMG/M
3300032174\|Ga0307470_10574886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	838	Open in IMG/M
3300033550\|Ga0247829_10481906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1026	Open in IMG/M
3300033551\|Ga0247830_10124966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1847	Open in IMG/M
3300033551\|Ga0247830_10837215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces antimycoticus	732	Open in IMG/M
3300033551\|Ga0247830_11585199	Not Available	524	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	51.79%
Environmental	Environmental	48.21%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	51.79%
Terrestrial	Environmental → Terrestrial	48.21%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	33.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.04%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	17.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	16.96%
Loam	Environmental → Terrestrial → Soil → Loam	15.18%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	17.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	16.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.29%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.46%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.07%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	8.04%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	8.04%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.25%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	5.36%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.46%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725000	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPWRP_02800540	2067725000	Soil	MSVVNLLSAEYSIQTETISDTPIFNALAATTPLFARPGSADVRPTPLTRSCVMPRSPRVGGGRHRRLSSRADYVPGGGRHHLVVAPV
JGI24737J22298_101386341	3300001990	Corn Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPG
C688J35102_1207400601	3300002568	Soil	VSVVNLLPVEYSYSVDAISDTPIFNALAATRAPFSRPVAAHAGPAALTRSCVMPRSPRMGGGRHHRLSSHADFVPAGGRHRL
Ga0062595_1000520942	3300004479	Soil	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA*
Ga0070658_100088231	3300005327	Corn Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHTDFVPGGGRHRLVVAANA*
Ga0070658_104051731	3300005327	Corn Rhizosphere	MSVVNLLSTEYSIQTETISDTPIFNALAATTPLFARPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVPGGGRHHLVVAPV*
Ga0070683_1006465782	3300005329	Corn Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSPPSATHARPATLTRSCVMPRSPRVAGGRHRRLSAHTDFVPGGGRHRLVVAANA*
Ga0070690_1003446411	3300005330	Switchgrass Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLATQARPATLTRSCVMPRSPRVGGGRHRRLSSRADYVTGGGRHHLVVAPV*
Ga0070670_1002750201	3300005331	Switchgrass Rhizosphere	AISDTPIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA*
Ga0068869_1000305382	3300005334	Miscanthus Rhizosphere	VSVVNLLPVEYSYSVDAISDTPIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA*
Ga0070680_1018193041	3300005336	Corn Rhizosphere	AISDTPIFNALAATTAPFSRPLATQARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA*
Ga0070691_101746182	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLATQARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA*
Ga0070687_1003308852	3300005343	Switchgrass Rhizosphere	LLPVEYSYSVEAISDTPIFNALAATTAPFSRPLATQARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA*
Ga0070661_1000609561	3300005344	Corn Rhizosphere	PIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA*
Ga0070671_1008108681	3300005355	Switchgrass Rhizosphere	MSVVNLLSTEYSIQPETISDTPIFNALAATTPLFARPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVPGGGRHHLVVAPV*
Ga0070688_1007441311	3300005365	Switchgrass Rhizosphere	MSVVNLLSTEYSIQPETISDTPIFNALAATTPLFARPGSAHARPTALTRSCVMPRSPRVTGGRHRRLSAHTDFVPGGGRHRLVVAANA*
Ga0070709_108566401	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSVVNLLSTEYSIQAETISDTPIFNALAATTPLFARPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVPGGGRHHLVVAPV*
Ga0070700_1000155753	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VSVVNLLPVEYSYSVDAISDTPIFNALAATTAPFSRSLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA*
Ga0070663_1009035521	3300005455	Corn Rhizosphere	VSVVSAQSAEYLFPFETISDTPIFNALAATTAPFSRSAARHGHAALTRSCVMPRSPRAAGGRHHRLSSSHAEHAHGGGRHRLIAVAHA*
Ga0070662_1001249841	3300005457	Corn Rhizosphere	PIFNALAATTAPFSRSLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA*
Ga0070685_108059432	3300005466	Switchgrass Rhizosphere	MSVVNLLSTEYSIQPETISDTPIFNALAATTPLFARPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVTGGGRHHLVVAPV*
Ga0068853_1008937582	3300005539	Corn Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSPPSATPARPATLTRSCVMPRSPRVAGGRHRRLSAHTDFVPGGGRHRLVVAANA*
Ga0070686_1011129761	3300005544	Switchgrass Rhizosphere	MSVVNLLSTEYSIQTETISDTPIFNALAATTPLFARPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVTGGGRHHLVVAPV*
Ga0070686_1014101822	3300005544	Switchgrass Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLATQARPATLTRSCVMPRSPRVTGGRHRRLSAHTDFVPGGGRHRLVVAANA*
Ga0070693_1003070362	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHSDFVPGGGRHRLVVAANA*
Ga0068855_1004974782	3300005563	Corn Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRSLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA*
Ga0068864_1013934592	3300005618	Switchgrass Rhizosphere	ISVSVVNLLPVEYSYSVDAISDTPIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA*
Ga0068861_1001348852	3300005719	Switchgrass Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPSAGHARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA*
Ga0068870_104923742	3300005840	Miscanthus Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSPPSATHARPATLTRSCVMPRSPRVTGGRHRRLSAHTDFVPGGGRHRLVVAANA*
Ga0070717_100856354	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSVVSALPVEYSYPMAAISDTPIFNALAATTALFSATRSEPAALSRSCVMPRSPRVGGGRHRRLSSHTDYVPGGRHRLLATAHA*
Ga0079222_101165962	3300006755	Agricultural Soil	MSVVNLLSTEYSIQTETISDTPIFNALAATTPLFARPGSAHARPTALARSCVMPRSPRVGGGRHRRLSSRADYVPGGGRHHLVVAPV*
Ga0079220_103130822	3300006806	Agricultural Soil	MSVVNLLSTEYSIQTETISDTPIFNALAATTALFARPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVPGGGRHHLVVAPV*
Ga0075429_1011080651	3300006880	Populus Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLATQARPATLTRSCVMPRSPRVAGGRHRRLSAHTDFVPGGGRHRLVVAANA*
Ga0068865_1006385572	3300006881	Miscanthus Rhizosphere	SYSVEAISDTPIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA*
Ga0068865_1017786721	3300006881	Miscanthus Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSPPSATPARPATLTRSCVMPRSPRVAGGRHRRLSAHSDFVPGGGRHRLVVAANA*
Ga0079219_111110901	3300006954	Agricultural Soil	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLATHDRPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANP*
Ga0105241_102587882	3300009174	Corn Rhizosphere	VSVVNLLPIEYSYSVEAISDTPIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA*
Ga0105241_106367031	3300009174	Corn Rhizosphere	MSVVNLLSTEYSIQTETISDTPIFNALAATTPLFARPGSAHARPTALPRSCVMPRSPRVGGGRHRRLSSRADYVTGGGRHHLVVAPV*
Ga0105248_129271161	3300009177	Switchgrass Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRL
Ga0105238_100259637	3300009551	Corn Rhizosphere	MSVVNLLPVEYSYSVDAISDTPIFNALAATTAPFSRSLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA*
Ga0134125_103656052	3300010371	Terrestrial Soil	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLATQARPAVLTRSCVMPRSPRVAGGRHRRLSAHSDFVPGGGRHRLVVAANA*
Ga0134128_108220211	3300010373	Terrestrial Soil	TICEPAGRISVSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVTGGRHRRLSAHTDFVPGGGRHRLVVAANA*
Ga0134128_111389552	3300010373	Terrestrial Soil	SDTPIFNALATTTPLFARPGSANARPTALTRSCVMPRSPRVGGGRHRRRSSRADYVPGGGRHHLVVAPV*
Ga0105239_100230162	3300010375	Corn Rhizosphere	VSVVNLLPVEYSYSVDAISDTPIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHSDFVPGGGRHRLVVAANA*
Ga0134126_104967102	3300010396	Terrestrial Soil	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSPPSATHARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA*
Ga0134127_109911861	3300010399	Terrestrial Soil	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLATHDRPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA
Ga0164303_115405941	3300012957	Soil	MSVVNLLSAEYSTQAETISDTPIFNALAATTALFGRPGSAHAGPTPLTRSCVMPRSPRAGGGRHRMLSARADYVPGGGR
Ga0164308_100442492	3300012985	Soil	MSVVNLLSAEYSTQAETISDTPIFNALAATTALFGRPGSAHAGPTPLTRSCVMPRSPRAGGGRHRRLSARADYVPGGGRHHLVVAPV*
Ga0164304_104634301	3300012986	Soil	ISKPVGRISMSVVNLLSTEYSIQTETISDTPIFNALAATTPLFARPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSARADYVPGGGRHHLVVAPV*
Ga0164307_101115021	3300012987	Soil	MSVVNLLSTEYSIQTETISDTPIFNALAATTPLFARPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVPSGGRHHLVVAPV*
Ga0164306_102764352	3300012988	Soil	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLATQARPAALTRSCVMPRSPRVAGGRHRRLSAHTDFVPGGGRHRLVVAANA*
Ga0157374_101048762	3300013296	Miscanthus Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVTGGRHRRLSAHTDFVPGGGRHRLVVAANA*
Ga0157378_103426362	3300013297	Miscanthus Rhizosphere	MSVVNLLSTEYSIQTETISDTPIFNALAATTPLFARPGSAHARPTTLTRSCVMPRSPRVGGGRHRRLSSRADYVPGGGRHHLVVAPV*
Ga0157378_104781242	3300013297	Miscanthus Rhizosphere	PVEYSYSVEAISDTPIFNALAATTAPFSRPLATQVRPATLTLSCVMPRSPRVTGGRHRRLSAHTDFVPGGGRHRLVVAANA*
Ga0157378_106253171	3300013297	Miscanthus Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVGGGRHRRLSSRADYVPGGGRHHLV
Ga0163162_127663481	3300013306	Switchgrass Rhizosphere	MSVVNLLSTEYSIQTETISDTPIFNALAATTPLFAQPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVPGGGRHHLV
Ga0157375_108022421	3300013308	Miscanthus Rhizosphere	MSVVNLLSTEYSIQPETISDTPIFNALAATTPLFARPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVPGGG
Ga0157380_104793532	3300014326	Switchgrass Rhizosphere	SDTPIFNALAATTAPFSRPLATQARPATLTRSCVMPRSPRVTGGRHRRLSAHTDFVPGGGRHRLVVAANA*
Ga0157379_102537181	3300014968	Switchgrass Rhizosphere	MSVVNLLSTEYSIQTETISDTPIFNALAATTPLFARPGSSHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVPGGGRHHLVVAPV*
Ga0157379_105147301	3300014968	Switchgrass Rhizosphere	SIQTETISDTPIFNALAATTPLFARPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVPGGGRHHLVVAPV*
Ga0190266_100225872	3300017965	Soil	VSVVNLLPVEYSYSVDAISDTPIFNALAATRAPFSRPVANHAGPAALTRSCVMPRSPRMGGGRHHRLSAHADFVPGGGRHRLVVAANA
Ga0190269_105827381	3300018465	Soil	VSVVNLLPVEYSYSVEAISDTPIFNALAATRAPFSRPVASHAGPAALTRSCVMPRSPRVAGGRHRRLSAHTDFVPGGGRHRLVVAANA
Ga0190268_107639431	3300018466	Soil	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLATPARPAALTRSCVMPRSPRVGGGRHHRLSSHTDFVPGGGRHRLVVAANA
Ga0190270_117323941	3300018469	Soil	VSVVSAQSADYLFPFESISDTPIFNALAATTAPFSRSVATPGHAALSRSCVMPRSPRAGGGRHHRLSSHAEHVHGGGRHRLVAAAHA
Ga0190274_106035222	3300018476	Soil	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSQPSAAHARPATLTRSCVMPRSPRVAGGRHRRLSTHSDFVPGGGRHRLVVAANA
Ga0206353_108695761	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MSVVNLLSTEYSIQPETISDTPIFNALAATTPLFARPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVTGGGRHHLVV
Ga0206353_119325941	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	ICEPAGRISVSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLATQARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA
Ga0207642_101069852	3300025899	Miscanthus Rhizosphere	MSVVNLLSTEYSIQPETISDTPIFNALAATTPLFARPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVTGGGRHHLVVAPV
Ga0207710_104209501	3300025900	Switchgrass Rhizosphere	MSVVNLLSTEYSIQPETISDTPIFNALAATTPLFARPGSAHARPTALTRSCVMPRSPRVTGGRHRRLSAHTDFVPGGGRHRLVVAANA
Ga0207688_100009336	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA
Ga0207688_102403411	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MSVVNLLSTEYSIQTETISDTPIFNALAATTPLFARPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVPGGGRHHLVVAPV
Ga0207645_101222032	3300025907	Miscanthus Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLATQARPAVLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA
Ga0207643_100523622	3300025908	Miscanthus Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLATQARPATLTRSCVMPRSPRVTGGRHRRLSAHTDFVPGGGRHRLVVAANA
Ga0207705_104531262	3300025909	Corn Rhizosphere	MSVVNLLSTEYSIQTETISDTPIFNALAATTPLFARPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVTGGGRHHLVVAPV
Ga0207654_105287381	3300025911	Corn Rhizosphere	TETISNTPIFNALAATTPLFARPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVPGGGRHHLVVAPV
Ga0207652_113849941	3300025921	Corn Rhizosphere	MSVVNLLSTEYSIQTETISDTPIFNALAATTPLFARPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVPGGGRHHL
Ga0207681_101013872	3300025923	Switchgrass Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLATQARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA
Ga0207681_117755961	3300025923	Switchgrass Rhizosphere	MSVVNLLSTEYSIQTETISDTPIFNALAATTPLFARPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVPGGGR
Ga0207650_115647321	3300025925	Switchgrass Rhizosphere	VSVVNLLPVECSYSVDAISDTPIFNALAATRAPFSRPVATHAGPAALTRSCVMPRSPRMGGGRHHRLSSHTDFVPGGGRHRLVVAANA
Ga0207659_106748232	3300025926	Miscanthus Rhizosphere	VSVVNLLPVEYSYSVDAISDTPIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHTDFVPGGGRHRLVVAANA
Ga0207687_112088661	3300025927	Miscanthus Rhizosphere	YSIQPETISDTPIFNALAATTPLFARPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVTGGGRHHLVVAPV
Ga0207690_118084811	3300025932	Corn Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLATQARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLV
Ga0207704_116365181	3300025938	Miscanthus Rhizosphere	VSVVNLLPVEYSYSVDAISDTPIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA
Ga0207691_100487991	3300025940	Miscanthus Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLATQARPATLTRSCVMPRSPRVAGGRHRRLSAHTDFVPG
Ga0207711_119458581	3300025941	Switchgrass Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHR
Ga0207689_105636711	3300025942	Miscanthus Rhizosphere	MSVVNLLSTEYSIQTETISDTPIFNALAATTPLFARPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVPGGGRHHLV
Ga0207661_102244882	3300025944	Corn Rhizosphere	MSVVNLLSTEYSIQTETISDTPIFNALAATTPLFARPGSAHARPTALARSCVMPRSPRVGGGRHRRLSSRADYVPGGGRHHLVVAPV
Ga0207661_111904911	3300025944	Corn Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLATQARPATLTRSCVMPRSPRVAGGRHRRLSAHTDFVPGGGRHRLVVAANA
Ga0207667_110849612	3300025949	Corn Rhizosphere	VSVVNLLPVEYSYSVDAISDTPIFNALAATTAPFSRSLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA
Ga0207651_109208832	3300025960	Switchgrass Rhizosphere	MSVVNLLSTEYSIQTETISDTPIFNALAATTPLFARPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVPG
Ga0207712_106196911	3300025961	Switchgrass Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRSLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGG
Ga0207678_100352762	3300026067	Corn Rhizosphere	MSVVNLLSTEYSIQPETISDTPIFNALAATTPLFARPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVPGGGRHHLVVAPV
Ga0207678_113293101	3300026067	Corn Rhizosphere	VSVVSAQSAEYLFPFETISDTPIFNALAATTAPFSRSAARHGHAALTRSCVMPRSPRAGGGRHHRLSSSHAEHAHGGGRHRLIAVAHA
Ga0207702_105108521	3300026078	Corn Rhizosphere	SDTPIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANA
Ga0207648_100703991	3300026089	Miscanthus Rhizosphere	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPSAGHARPATLTRSCVMPRSPRVGGGRHRRLSSRADYVTGGGRHHLVVAPV
Ga0209073_103503831	3300027765	Agricultural Soil	MSVVNLLSAEYSIQTETISDTPIFNALAATTALFARPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVPGGGRHHLVVAPV
Ga0268266_102441122	3300028379	Switchgrass Rhizosphere	VSVVNLLPVEYSYSVEAIADTPIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHADFVPGGGRHRLVVAANAWGGLAFGATPD
Ga0268264_105953472	3300028381	Switchgrass Rhizosphere	MSVVNLLSTEYSIQPETISDTPIFNALAATTPLFARPGSAHARPTALTRSCVMPRSPRVGGGRHRRLSSRADYVTGGGRH
Ga0247820_110880342	3300028597	Soil	SYSVEAISDTPIFNALAATTAPFSRPSAGHARPATLTRSCVMPRSPRVAGGRHRRLSAHSDFVPGGGRHRLVVAANA
Ga0307321_11277371	3300028704	Soil	KQSVNQPGGFSVSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHSDFVPGGGRHRLVVAANA
Ga0307291_10482671	3300028707	Soil	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSPPLATPARPATLTRSCVMPRSPRVAGGRHRRLSAHSDFVPGGGRHRLVVAANA
Ga0307295_101358362	3300028708	Soil	DTPIFNALAATTAPFSPPLATPARPATLTRSCVMPRSPRVAGGRHRRLSAHSDFVPGGGRHRLVVAANA
Ga0307303_100741781	3300028713	Soil	VSVVNLLPVEYSYSVEAISDTPIFNALAATRAPFSRPVTAHAGPAALTRSCVMPRSPRTGGGRHHRLSSHADFVPGGGRHRLVVAANA
Ga0307309_100914261	3300028714	Soil	VSVVSAQPAEFSFPFETISDTPIFNALAATTPLFSQSVTTHGHAALSRSCVMPRSPRAGGGRHHRLSSHAEHGGGRHRLVAAVHA
Ga0307294_101286101	3300028810	Soil	PAGRISVSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSQPLAAHARPATLTRSCVMPRSPRVAGGRHRRLSTHSDFVPGGGRHRLVVAANA
Ga0307314_100240902	3300028872	Soil	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSLPSAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHSDFVPGGGRHRLVV
Ga0326721_108587061	3300032080	Soil	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPSDTHARPATLTRSCVMPRSPRVAGGRHRRLSAHTDFVPGGGRHRLVVAANA
Ga0307470_105748862	3300032174	Hardwood Forest Soil	VSVVSAQSAEYLFPFEAISDTPIFNALAATTAPFSRSVATHGHAALSRSCVMPRSPRAGGGRHHRLSSHAEHVHGGGRHRLVAVAHA
Ga0247829_104819061	3300033550	Soil	VSVVSAQSAEYLFPFETISDTPIFNALAATTAPFSRSAATHGHAALSRSCVMPRSPRAGGGRHHRLSSHAEHVHGGGRHRLVAVAHA
Ga0247830_101249662	3300033551	Soil	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLATQARPAVLTRSCVMPRSPRVAGGRHRRLSAHIDFVPGGGRHRLVVAANA
Ga0247830_108372151	3300033551	Soil	VSVVNLLPVEYSYSVEAISDTPIFNALAATTAPFSRPLAAHARPATLTRSCVMPRSPRVAGGRHRRLSAHSDFVPGGGRHRLVVAANA
Ga0247830_115851991	3300033551	Soil	MSVVSAQPAEYLFPFETISDTPIFNALAATTAPFSRSVATHGHAALSRSCVMPRSPRAGGGRHHRLSSHAEHVHGGGRHRLIAVAHA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084077

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences