Metagenome / Metatranscriptome Family F084056

Basic Information
Family ID	F084056
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	77 residues
Representative Sequence	MKTLKFALLAAGLLAVAPAFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPE
Number of Associated Samples	67
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	68.93 %
% of genes near scaffold ends (potentially truncated)	41.07 %
% of genes from short scaffolds (< 2000 bps)	84.82 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (69.643 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.214 % of family members)
Environment Ontology (ENVO)	Unclassified (30.357 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.643 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 16.67% β-sheet: 9.09% Coil/Unstructured: 74.24%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF13365	Trypsin_2	9.82
PF03401	TctC	3.57
PF09361	Phasin_2	2.68
PF13545	HTH_Crp_2	1.79
PF00072	Response_reg	0.89
PF13531	SBP_bac_11	0.89
PF00027	cNMP_binding	0.89
PF13180	PDZ_2	0.89
PF07311	Dodecin	0.89
PF03928	HbpS-like	0.89
PF01757	Acyl_transf_3	0.89
PF04972	BON	0.89
PF13523	Acetyltransf_8	0.89
PF03404	Mo-co_dimer	0.89
PF00528	BPD_transp_1	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	3.57
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
All Organisms	root	All Organisms	30.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
cellular organisms	root	All Organisms → cellular organisms	30.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	29.46 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	16.07 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.89 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.89 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.93 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.89 %
Moraxellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales	0.89 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	3.57 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.89 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.89 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.89 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.89 %
Moraxellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Deuterostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia	0.89 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	0.89 %
Methyloferula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula	0.89 %
Azorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium	0.89 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.89 %
Psychrobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter	0.89 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
unclassified Lachnospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae	0.89 %
unclassified Psychrobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → unclassified Psychrobacter	0.89 %
Azorhizobium doebereinerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae	0.89 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.89 %
Chordata	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata	0.89 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.89 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Craniata	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata	0.89 %
Psychrobacter sp. PAMC 21119	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → unclassified Psychrobacter → Psychrobacter sp. PAMC 21119	0.89 %
Lachnospiraceae bacterium AC3007	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium AC3007	0.89 %
Azorhizobium doebereinerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae	0.89 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.89 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.89 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Vertebrata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata	0.89 %
Psychrobacter sp. PAMC 21119	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → unclassified Psychrobacter → Psychrobacter sp. PAMC 21119	0.89 %
Lachnospiraceae bacterium AC3007	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium AC3007	0.89 %
Azorhizobium doebereinerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae	0.89 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.89 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.89 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Gnathostomata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata	0.89 %
Psychrobacter sp. PAMC 21119	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → unclassified Psychrobacter → Psychrobacter sp. PAMC 21119	0.89 %
Lachnospiraceae bacterium AC3007	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium AC3007	0.89 %
Azorhizobium doebereinerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae	0.89 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.89 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.89 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Teleostomi	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi	0.89 %
Psychrobacter sp. PAMC 21119	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → unclassified Psychrobacter → Psychrobacter sp. PAMC 21119	0.89 %
Lachnospiraceae bacterium AC3007	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium AC3007	0.89 %
Azorhizobium doebereinerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae	0.89 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.89 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.89 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Euteleostomi	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi	0.89 %
Psychrobacter sp. PAMC 21119	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → unclassified Psychrobacter → Psychrobacter sp. PAMC 21119	0.89 %
Lachnospiraceae bacterium AC3007	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium AC3007	0.89 %
Azorhizobium doebereinerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae	0.89 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.89 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.89 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Sarcopterygii	superclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii	0.89 %
Psychrobacter sp. PAMC 21119	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → unclassified Psychrobacter → Psychrobacter sp. PAMC 21119	0.89 %
Lachnospiraceae bacterium AC3007	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium AC3007	0.89 %
Azorhizobium doebereinerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae	0.89 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.89 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.89 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Dipnotetrapodomorpha	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii → Dipnotetrapodomorpha	0.89 %
Psychrobacter sp. PAMC 21119	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → unclassified Psychrobacter → Psychrobacter sp. PAMC 21119	0.89 %
Lachnospiraceae bacterium AC3007	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium AC3007	0.89 %
Azorhizobium doebereinerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae	0.89 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.89 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.89 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Tetrapoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii → Dipnotetrapodomorpha → Tetrapoda	0.89 %
Psychrobacter sp. PAMC 21119	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → unclassified Psychrobacter → Psychrobacter sp. PAMC 21119	0.89 %
Lachnospiraceae bacterium AC3007	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium AC3007	0.89 %
Azorhizobium doebereinerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae	0.89 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.89 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.89 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Amphibia	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii → Dipnotetrapodomorpha → Tetrapoda → Amphibia	0.89 %
Psychrobacter sp. PAMC 21119	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → unclassified Psychrobacter → Psychrobacter sp. PAMC 21119	0.89 %
Lachnospiraceae bacterium AC3007	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium AC3007	0.89 %
Azorhizobium doebereinerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae	0.89 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.89 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.89 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Batrachia	superorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii → Dipnotetrapodomorpha → Tetrapoda → Amphibia → Batrachia	0.89 %
Psychrobacter sp. PAMC 21119	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → unclassified Psychrobacter → Psychrobacter sp. PAMC 21119	0.89 %
Lachnospiraceae bacterium AC3007	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium AC3007	0.89 %
Azorhizobium doebereinerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae	0.89 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.89 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.89 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Anura	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii → Dipnotetrapodomorpha → Tetrapoda → Amphibia → Batrachia → Anura	0.89 %
Psychrobacter sp. PAMC 21119	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → unclassified Psychrobacter → Psychrobacter sp. PAMC 21119	0.89 %
Lachnospiraceae bacterium AC3007	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium AC3007	0.89 %
Azorhizobium doebereinerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae	0.89 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.89 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.89 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Pipoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii → Dipnotetrapodomorpha → Tetrapoda → Amphibia → Batrachia → Anura → Pipoidea	0.89 %
Psychrobacter sp. PAMC 21119	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → unclassified Psychrobacter → Psychrobacter sp. PAMC 21119	0.89 %
Lachnospiraceae bacterium AC3007	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium AC3007	0.89 %
Azorhizobium doebereinerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae	0.89 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.89 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.89 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Pipidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii → Dipnotetrapodomorpha → Tetrapoda → Amphibia → Batrachia → Anura → Pipoidea → Pipidae	0.89 %
Psychrobacter sp. PAMC 21119	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → unclassified Psychrobacter → Psychrobacter sp. PAMC 21119	0.89 %
Lachnospiraceae bacterium AC3007	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium AC3007	0.89 %
Azorhizobium doebereinerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae	0.89 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.89 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.89 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Xenopodinae	subfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii → Dipnotetrapodomorpha → Tetrapoda → Amphibia → Batrachia → Anura → Pipoidea → Pipidae → Xenopodinae	0.89 %
Psychrobacter sp. PAMC 21119	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → unclassified Psychrobacter → Psychrobacter sp. PAMC 21119	0.89 %
Lachnospiraceae bacterium AC3007	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium AC3007	0.89 %
Azorhizobium doebereinerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae	0.89 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.89 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.89 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Xenopus	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii → Dipnotetrapodomorpha → Tetrapoda → Amphibia → Batrachia → Anura → Pipoidea → Pipidae → Xenopodinae → Xenopus	0.89 %
Psychrobacter sp. PAMC 21119	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → unclassified Psychrobacter → Psychrobacter sp. PAMC 21119	0.89 %
Lachnospiraceae bacterium AC3007	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium AC3007	0.89 %
Azorhizobium doebereinerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae	0.89 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.89 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.89 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Silurana	subgenus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii → Dipnotetrapodomorpha → Tetrapoda → Amphibia → Batrachia → Anura → Pipoidea → Pipidae → Xenopodinae → Xenopus → Silurana	0.89 %
Psychrobacter sp. PAMC 21119	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → unclassified Psychrobacter → Psychrobacter sp. PAMC 21119	0.89 %
Lachnospiraceae bacterium AC3007	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium AC3007	0.89 %
Azorhizobium doebereinerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae	0.89 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.89 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.89 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.64 %
Xenopus tropicalis	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii → Dipnotetrapodomorpha → Tetrapoda → Amphibia → Batrachia → Anura → Pipoidea → Pipidae → Xenopodinae → Xenopus → Silurana → Xenopus tropicalis	0.89 %
Psychrobacter sp. PAMC 21119	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → unclassified Psychrobacter → Psychrobacter sp. PAMC 21119	0.89 %
Lachnospiraceae bacterium AC3007	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium AC3007	0.89 %
Azorhizobium doebereinerae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae	0.89 %
Methyloferula stellata	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	0.89 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.89 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_119093798	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Teleostomi → Euteleostomi → Sarcopterygii → Dipnotetrapodomorpha → Tetrapoda → Amphibia → Batrachia → Anura → Pipoidea → Pipidae → Xenopodinae → Xenopus → Silurana → Xenopus tropicalis	637	Open in IMG/M
3300002568\|C688J35102_119463800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	700	Open in IMG/M
3300002568\|C688J35102_119555693	All Organisms → cellular organisms → Bacteria → Proteobacteria	719	Open in IMG/M
3300002568\|C688J35102_120554305	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300003572\|Ga0007424J51698_1003792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Moraxellales → Moraxellaceae → Psychrobacter → unclassified Psychrobacter → Psychrobacter sp. PAMC 21119	501	Open in IMG/M
3300004081\|Ga0063454_101300653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → unclassified Lachnospiraceae → Lachnospiraceae bacterium AC3007	609	Open in IMG/M
3300004114\|Ga0062593_102620338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → Azorhizobium doebereinerae	573	Open in IMG/M
3300004153\|Ga0063455_100539092	Not Available	740	Open in IMG/M
3300004156\|Ga0062589_101674125	Not Available	633	Open in IMG/M
3300004156\|Ga0062589_102021763	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300004157\|Ga0062590_102108099	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300004479\|Ga0062595_101610210	Not Available	606	Open in IMG/M
3300004643\|Ga0062591_101416538	Not Available	690	Open in IMG/M
3300004643\|Ga0062591_102976873	Not Available	503	Open in IMG/M
3300005093\|Ga0062594_101107372	Not Available	775	Open in IMG/M
3300005329\|Ga0070683_100584025	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300005329\|Ga0070683_100770669	Not Available	922	Open in IMG/M
3300005329\|Ga0070683_101034185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methyloferula → Methyloferula stellata	789	Open in IMG/M
3300005331\|Ga0070670_100657063	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300005587\|Ga0066654_10597650	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300006046\|Ga0066652_101561664	Not Available	609	Open in IMG/M
3300006755\|Ga0079222_12156900	Not Available	553	Open in IMG/M
3300006791\|Ga0066653_10143052	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300006800\|Ga0066660_10303255	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300009011\|Ga0105251_10330557	Not Available	693	Open in IMG/M
3300009177\|Ga0105248_10942082	All Organisms → cellular organisms → Bacteria → Proteobacteria	975	Open in IMG/M
3300010337\|Ga0134062_10235846	Not Available	846	Open in IMG/M
3300012212\|Ga0150985_100463963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5230	Open in IMG/M
3300012212\|Ga0150985_100984608	Not Available	805	Open in IMG/M
3300012212\|Ga0150985_103101690	Not Available	835	Open in IMG/M
3300012212\|Ga0150985_106027784	Not Available	835	Open in IMG/M
3300012212\|Ga0150985_106422439	Not Available	926	Open in IMG/M
3300012212\|Ga0150985_109822896	Not Available	704	Open in IMG/M
3300012212\|Ga0150985_110141134	Not Available	789	Open in IMG/M
3300012212\|Ga0150985_110428106	Not Available	625	Open in IMG/M
3300012212\|Ga0150985_110593205	Not Available	744	Open in IMG/M
3300012212\|Ga0150985_111822859	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300012212\|Ga0150985_112789613	Not Available	539	Open in IMG/M
3300012212\|Ga0150985_116435559	Not Available	539	Open in IMG/M
3300012403\|Ga0134049_1072011	Not Available	504	Open in IMG/M
3300012469\|Ga0150984_104568850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300012469\|Ga0150984_111594261	Not Available	502	Open in IMG/M
3300012469\|Ga0150984_123327741	Not Available	565	Open in IMG/M
3300012905\|Ga0157296_10353003	Not Available	534	Open in IMG/M
3300012907\|Ga0157283_10370913	Not Available	522	Open in IMG/M
3300012915\|Ga0157302_10392521	Not Available	569	Open in IMG/M
3300012955\|Ga0164298_10476090	Not Available	828	Open in IMG/M
3300012957\|Ga0164303_10063039	Not Available	1698	Open in IMG/M
3300012960\|Ga0164301_10025301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2737	Open in IMG/M
3300012960\|Ga0164301_10926375	Not Available	678	Open in IMG/M
3300012960\|Ga0164301_10928658	Not Available	678	Open in IMG/M
3300012960\|Ga0164301_11420576	Not Available	568	Open in IMG/M
3300012984\|Ga0164309_11086739	Not Available	664	Open in IMG/M
3300012985\|Ga0164308_10316241	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300013296\|Ga0157374_12000260	Not Available	606	Open in IMG/M
3300014325\|Ga0163163_10200723	Not Available	2043	Open in IMG/M
3300015077\|Ga0173483_10028269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2027	Open in IMG/M
3300015371\|Ga0132258_10993898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	2120	Open in IMG/M
3300015372\|Ga0132256_101145434	Not Available	892	Open in IMG/M
3300015373\|Ga0132257_100089162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3529	Open in IMG/M
3300015374\|Ga0132255_103145602	Not Available	704	Open in IMG/M
3300018468\|Ga0066662_10145236	All Organisms → cellular organisms → Bacteria → Proteobacteria	1783	Open in IMG/M
3300018468\|Ga0066662_10555119	Not Available	1063	Open in IMG/M
3300018468\|Ga0066662_12028087	Not Available	602	Open in IMG/M
3300018468\|Ga0066662_12315841	Not Available	564	Open in IMG/M
3300018468\|Ga0066662_12652166	Not Available	530	Open in IMG/M
3300021374\|Ga0213881_10528998	Not Available	535	Open in IMG/M
3300021374\|Ga0213881_10597223	Not Available	503	Open in IMG/M
3300021384\|Ga0213876_10676875	Not Available	549	Open in IMG/M
3300021388\|Ga0213875_10140042	Not Available	1132	Open in IMG/M
3300021953\|Ga0213880_10048172	Not Available	1033	Open in IMG/M
3300025735\|Ga0207713_1237467	Not Available	542	Open in IMG/M
3300025898\|Ga0207692_11142302	Not Available	516	Open in IMG/M
3300025900\|Ga0207710_10585849	Not Available	582	Open in IMG/M
3300025915\|Ga0207693_11270921	Not Available	552	Open in IMG/M
3300025928\|Ga0207700_10822205	Not Available	831	Open in IMG/M
3300025944\|Ga0207661_10186921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1814	Open in IMG/M
3300025945\|Ga0207679_11896316	Not Available	543	Open in IMG/M
3300026552\|Ga0209577_10353998	Not Available	1079	Open in IMG/M
3300028707\|Ga0307291_1105838	Not Available	703	Open in IMG/M
3300028709\|Ga0307279_10096246	Not Available	546	Open in IMG/M
3300028778\|Ga0307288_10211251	All Organisms → cellular organisms → Bacteria → Proteobacteria	750	Open in IMG/M
3300028885\|Ga0307304_10251238	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300030986\|Ga0308154_103190	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300030988\|Ga0308183_1182900	Not Available	536	Open in IMG/M
3300031058\|Ga0308189_10413005	Not Available	561	Open in IMG/M
3300031099\|Ga0308181_1135274	Not Available	565	Open in IMG/M
3300031423\|Ga0308177_1010851	Not Available	699	Open in IMG/M
3300031938\|Ga0308175_100513873	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300031938\|Ga0308175_101110789	Not Available	877	Open in IMG/M
3300031938\|Ga0308175_101601132	Not Available	728	Open in IMG/M
3300031938\|Ga0308175_101839340	Not Available	678	Open in IMG/M
3300031996\|Ga0308176_10445630	Not Available	1303	Open in IMG/M
3300034268\|Ga0372943_0007528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5590	Open in IMG/M
3300034268\|Ga0372943_0043345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	2488	Open in IMG/M
3300034268\|Ga0372943_0106176	All Organisms → cellular organisms → Bacteria	1658	Open in IMG/M
3300034268\|Ga0372943_0269551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1074	Open in IMG/M
3300034268\|Ga0372943_0764870	Not Available	639	Open in IMG/M
3300034268\|Ga0372943_0810794	Not Available	620	Open in IMG/M
3300034268\|Ga0372943_0818665	Not Available	617	Open in IMG/M
3300034268\|Ga0372943_0940220	Not Available	575	Open in IMG/M
3300034644\|Ga0370548_064143	Not Available	682	Open in IMG/M
3300034644\|Ga0370548_151687	Not Available	500	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.43%
Host-Associated	Host-Associated	28.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.43%
Plants	Host-Associated → Plants	28.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.82%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	2.68%
Roots	Host-Associated → Plants → Roots	2.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	16.07%
Loam	Environmental → Terrestrial → Soil → Loam	13.39%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.46%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	2.68%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	16.07%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.14%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	7.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.36%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.46%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	2.68%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.21%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	12.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.36%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.46%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.68%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	2.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.79%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003572	Grassland soil microbial communities from Hopland, California, USA - Sample H3_Bulk_40 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300025735	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030986	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_143 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031423	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_148 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084056

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1181776381	3300002568	Soil	MKTLKFALLAAGLLAAAPAFAQTAGGTANTGPQGSGNFVAGKPEGNGNFVAGKPEGNGNFVA
C688J35102_1189128321	3300002568	Soil	MKSLKFALLAAGLLAVAPAFAQTAGGTANTGPQGSGNFVAGKPEGSGNFVAGKPEGSGNFVAGK
C688J35102_1190937981	3300002568	Soil	MNILKLAFFAAGLLVAAPAFAQGTAGGTPNTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPEATSKPVGDKP
C688J35102_1194638001	3300002568	Soil	MKTLKFALLAAGLLAVAPAFAQTAGGTANTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPEGTGNPVAGKPKDPAK*
C688J35102_1195556931	3300002568	Soil	MNAIKLTLLAAGLLTSLPVLAQTAGGTQNTGPQGTGNFVAGKPEGTGNPIAGQTGRMGTPVAGKPEGTGNPVAGQPVDKMEKK*
C688J35102_1205543052	3300002568	Soil	MKTLKFALLAAGLFAVAPAFAQTAGGTANTGPQGTGNFVAGKPEGNGNFVAGQTGRIGTPVAGKPEGNGNFVAGKPKDREH*
Ga0007424J51698_10037921	3300003572	Avena Fatua Rhizosphere	FAVSTATEISTMKTLKLAFLAAGLLAAAPAFAQTAGGTQNTGPQGTGNFVAGKPEGNGNFVAGQTNRIGTPVAGKPEGNGNFVAGKPKDPAK*
Ga0063454_1013006531	3300004081	Soil	MNTIKLTLFATALLTSLPVLAQTAGGTQNTGPQGTGNFVAGKSEGTGNPVAGQTGRMGTPVAGKPEGTGNPVAGQPAEKMEKK*
Ga0062593_1026203381	3300004114	Soil	MKTLKFALLAAGLLAAAPAFAQTAGGTANTGPQGSGNFVAGKPEGNGNFVAGQTGRIGTPVAGKPEGNGNFVAGKPKD
Ga0063455_1005390921	3300004153	Soil	MKTLKFALLAAGLLAAAPAFAQTAGGTANTGPQGSGNFVAGKPEGNGNFVAGKPEGNGNFVAG
Ga0062589_1016741252	3300004156	Soil	SCVMVAPALAQTAGGTQNSGPQGTGNWLASKPEGNGNFVAGKPEGNGNFVAGKPEGTGNFVAGKPKDRN*
Ga0062589_1020217631	3300004156	Soil	MKTLKLVVVAAGLLTSATSFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPEATSKPVGNKPAAPPK*
Ga0062590_1021080991	3300004157	Soil	AQTAGGTQNSGPQGTGNWLASKPEGNGNFVAGKPEGNGNFVADKPEGTGNFVAGKPKDRN
Ga0062595_1016102102	3300004479	Soil	MKTLKFALLAAGLLAAAPAFAQTAGGTANTGPQGSGNFVAGKPEGNGNFVAGQTGRIGTPVAGKPEGNGNFVASKPKDRE*
Ga0062591_1014165381	3300004643	Soil	MKTLKFAFLAAGLLAVAPAFAQTAGGTANTGPQGSGNFVAGKPEGNDNFVAGQTGRIGTPVAGKPEGNGNFVAGKPKYRE*
Ga0062591_1029768731	3300004643	Soil	AAAPALAQTAGGTANTGPQGTGNFVAGKPEGNGNFVAGQTGRIGTPVAGKPEGNGNFVAGKPKDRNN*
Ga0062594_1011073721	3300005093	Soil	MKTLKFAFLAAGLLAVAPAFAQTAGGTANTGPQGSGNFVAGKPEGNGNFVAGQTGRIGTPVAGKPEGNGNFVAGKPKDRE*
Ga0070683_1005840252	3300005329	Corn Rhizosphere	MKKLKLVVVAAGLLTSATAFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPEGTGNPVAGKPAAPAK*
Ga0070683_1007706691	3300005329	Corn Rhizosphere	MKMMKFALLAAGVLAAAPALAQTAGGTANTGPQGSGNFVAGKPEGNGNFVAGKPEGNGVLRLEPCPCPATHVTRPD
Ga0070683_1010341851	3300005329	Corn Rhizosphere	MKTLKFALLAAGLLAAAPAFAQTAGGTANTGPQGTGNFVAGQTNRIGTPVAGKPEGNGNFVAGKPEGNGNFVAGKPKDRNN*
Ga0070670_1006570632	3300005331	Switchgrass Rhizosphere	MKKLKLVVVAAGLLTSATSFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVARKPEGTGNPVGGKPAAPAK*
Ga0066654_105976502	3300005587	Soil	MKTLKLAVVAAGLLASATAFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGSGNFVAGKPEGTGNPVAGKPATPAK*
Ga0066652_1015616641	3300006046	Soil	MKTLKLAFLAAGLLAAAPAFAQTAGGTQNTGPQGTGNFVAGKPEGNGNFVAGQTNRIGTPVAGKPEGNGNFVAGKPKDPAK*
Ga0079222_121569001	3300006755	Agricultural Soil	MKTLKFALLAAGLLAAAPAFAQTAGGTANTGPQGTGNFVAGKPEGNGNFVAGQTGRIGTPVAGKPEGNGNFVAGKPKDRE*
Ga0066653_101430521	3300006791	Soil	MNAIKLTVLAAGLLTSLPVLAQTAGGTQNTGPQGTGNFVAGKPEGTGNPIAGQTGRMGTPVAGKPEGTGNPVAGQPVDKMEKK*
Ga0066660_103032552	3300006800	Soil	MKTLKLAVVAAGLLASATAFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGTGNFVAGKPEGTGNPVAGKPATSAK*
Ga0066660_113040472	3300006800	Soil	MKTLKFALLAAGLLAAAPAFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGK
Ga0105251_103305571	3300009011	Switchgrass Rhizosphere	MKTLKLVVIAAGLLASATAFAQTAGGTQNTGPQGTGNFVAGKPEGSGDFVAGKPEGNGNFVAGKPEGTGN
Ga0105248_109420822	3300009177	Switchgrass Rhizosphere	MEISTMKTLKFALLAAGLLAAAPAFAQTAGGTANTGPQGSGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPKDPAK*
Ga0134062_102358462	3300010337	Grasslands Soil	MKTLKFALLAAGLLAAAPAFAQTAGGTANTGPQGSGNFVAGKPEGNGNFVAGKPEGNGNFVAGKPEGN
Ga0150985_1004639632	3300012212	Avena Fatua Rhizosphere	MNAIKLTLLAAGLLTSLPVLAQTAGGTQNTGPQGTGNFGAGKPEGTGNPIAGQTGRMGTPVAGKPEGTGNPVAGQPVDKMEKK*
Ga0150985_1009846081	3300012212	Avena Fatua Rhizosphere	MKTLKFALLAAGLLAAAPAFAQTAGGTANTGPQGTGNFVAGKPEGNGNFVAGQTGRIGTPVAGKPEGNGNFVAGKPKDPAK*
Ga0150985_1030643662	3300012212	Avena Fatua Rhizosphere	MEPTVSAVSTVTEISTMKKLKLAFLAAGLLAAAPAFAQTAGGTANTGPQGTGNFVAGKPEGNGNFVAGKPEGTGNFVAGKPEGNGNFVAGKPKDPAK*
Ga0150985_1031016902	3300012212	Avena Fatua Rhizosphere	LLAAGLLAVAPAFAQTAGGTANTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPEGTGNPVAGKPKDPAK*
Ga0150985_1060277842	3300012212	Avena Fatua Rhizosphere	MKTLKLVVVAAGLLASATAFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGSGNFVAGKPEGTGNPVAGKPKDPAIPAK*
Ga0150985_1064224391	3300012212	Avena Fatua Rhizosphere	MKTLKFALLAAGLLAVAPAFAQTAGNTPNTGAQGSGNFVAGKPEGSGNFVSGKPEGSGNFVAGKPEGTGNPVAGKPKDPAK*
Ga0150985_1098228962	3300012212	Avena Fatua Rhizosphere	SPWATITEISTMKTLKFALLAAGLFAVAPAFAQTAGGTANTGPQGTGNFVAGNPEGNGNFVAGQTGRIGTPVAGKPEGNGNFVAGKPKDREH*
Ga0150985_1101411342	3300012212	Avena Fatua Rhizosphere	VLLPFGGKRRTPMNTLKVALVAAGLVASASAFAQTAGGTQNSGPQGTGNFVAGKPEGSGNFVAGKPEGSGNFVAGKPEGTGNPVAGKPATPAK*
Ga0150985_1104281061	3300012212	Avena Fatua Rhizosphere	MKTLKFALLAAGLLAAAPAFAQTAGGTANTGPQGSGNFVAGKPEGNGNFVAGQTNRIGTPVAGKPEGNGNFVAGKPKDRNN*
Ga0150985_1105932052	3300012212	Avena Fatua Rhizosphere	MKTIKCALLAAGLLAVAPAFAQTAGGTTNTGPQGTGNFVAGKPEGNGNFVAGQTNRVGTPVAGKPEGNGNFVAGKPKDPAK*
Ga0150985_1118228591	3300012212	Avena Fatua Rhizosphere	APAFAQTAGGTQNTGPQGTGNFVAGKPEGNGNFVAGQTNRIGTPVAGKPEGNGNFVAGKPKDPAK*
Ga0150985_1127896131	3300012212	Avena Fatua Rhizosphere	AGLLAAAPAFAQTAGGTANTGPQGSGNFVAGKPEGNGNFVAGQTARGGTPVAGKPEGNGNFVAGKPKDRN*
Ga0150985_1164355591	3300012212	Avena Fatua Rhizosphere	PLGRKWRTSMNILKLAFFAAGLLVAAPAFAQGTAGGTPNTGPQGTGNFVAGKPEGSGNFVAGKPEGNDNFVAGKPEVTSKPVGDKPAAPPK*
Ga0134049_10720111	3300012403	Grasslands Soil	MQFTVSAVSTVTEISTMKTLKLAFLAAGLLAAAPAFAQTAGGTQNTGPQGTGNFVAGKPEGNGNFVAGQTNRIGTPVAGKPEGNGNFVAGKPKDPAK*
Ga0150984_1045688501	3300012469	Avena Fatua Rhizosphere	MKTLRFTLLAATLFAAAPAFAQTAGGTPNTGPQGSGNFVAGKPEGNGNFVAGKPEGSGNFVAGKPKDPAK*
Ga0150984_1115942611	3300012469	Avena Fatua Rhizosphere	RRGRDMGDLQMKTIKFALLAAGLLAAAPAFAQTAGGTQNTGPQGTGNFVAGKPEGNGNFVAGKPEGNGNFVAGKPEGNGNFVAGKPKDPAK*
Ga0150984_1233277411	3300012469	Avena Fatua Rhizosphere	MKTLKLAVVAAGLLASATAFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGSGNFVAGKPEGTGNPVAGKPKDPAIPAK*
Ga0157296_103530031	3300012905	Soil	SLKFALLAAGLLAAAPAFAQTAGGTANTGPQGSGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPKDPAK*
Ga0157283_103709131	3300012907	Soil	MKTLQFALLAAGLLAAAPAFAQTAGGTANTGPQGSGNFVAGKPEGNGNFVAGKPEGNGNFVAGKPEG
Ga0157302_103925211	3300012915	Soil	LKFALLAAGLLAVAPALAQTAGGTANTGPQGSGNFVAGKPEGNGNFVAGKPEGNGNFVAGKPKDRNN*
Ga0164298_104760901	3300012955	Soil	MKMMKFALLAAGVLAAAPALAQTAGGTANTGPQGSGNFVAGKPEGNGNFVAGKPEGNGNFVAGKPKDRNN*
Ga0164303_100630393	3300012957	Soil	AAPAFAQTAGGTANTGPQGSGNFVAGKPEGNGNFVAGKPEGNGNFVAGKPKDRNN*
Ga0164301_100253011	3300012960	Soil	MKTLKFALLAAGLLAVAPAFAQTAGGTANTGPQGTCNFVAGKPEGSGNFVAGKPEGTGNFVAGKPEGNGNFVAGKPKDPAK*
Ga0164301_109263751	3300012960	Soil	MKSLKFALLAAGLLATAPAFAQTAGGTANTGPQGSGNFVAGKPEGSGNFVAGKPEGNGNFVAGK
Ga0164301_109286581	3300012960	Soil	MKMLKFALLAAGLLAAAPAFAQTAGGTANTGPQGSGNFVAGKPEGNGNFVAGQTNRIGTPVAGKPEGNGNFVAGKPKDRE*
Ga0164301_114205762	3300012960	Soil	GAGFSKIYRRRFYAARSRRRSSMKTLKLVVVAAGLLTSATSFAQTAGGTQNTGPQGTGNFVAGKPEGSGNSVAGKPEGNGNFVAGKPEATSKPLGDKPAAPPK*
Ga0164309_110867391	3300012984	Soil	VGDTTEISTMKTLKFAFLAAGLLAVAPAFAQTAGGTANTGPQGSGNFVAGKPEGNGNFVAGQTGRIGTPVAGKPEGNGNFVAGK
Ga0164308_103162411	3300012985	Soil	MKMMKFALLAAGVLAAAPALAQTAGGTANTGPQGSGNFVAGKPEGNGNFVAGKPEGNGNFVRATVMLASA*
Ga0164304_100780274	3300012986	Soil	MKSLKFALLAAGLLATAPAFAQTAGGTANTGPQGSGNFVAGKPEGSGNFVAGKPEGNGNFVAG
Ga0164307_100059647	3300012987	Soil	MKSLKFALLAAGLLAAAPAFAQTAGGTANTGPQGSGNFVAGKPEGSGNFVAGKPEGNGNFVAGK
Ga0157374_120002601	3300013296	Miscanthus Rhizosphere	MKKLKLVVVAAGLLTSATSFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPEG
Ga0163163_102007234	3300014325	Switchgrass Rhizosphere	VGDTTEISTMKTLKFAFLAAGLLAVAPAFAQTAGGTANTGPQGSGNFVAGKPEGNGNFVAGQTGRIGTPVAGKPEGNGNFVAGKPKDRE*
Ga0173483_100282692	3300015077	Soil	MKKLKLVVVAAGLLTSATSFAQTAGCTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPEGTGNPVGGKPAAPAK*
Ga0132258_109938983	3300015371	Arabidopsis Rhizosphere	MVAPALAQTAGGTQNSGPQGTGNWLASKPEGNGNFVAGKPEGNGNFVAGKPEGNGNFVAGKPKDRN*
Ga0132256_1011454341	3300015372	Arabidopsis Rhizosphere	MKTLKFALLAAGLLAVAPAFAQTAGGTANTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPKDPAK*
Ga0132257_1000891621	3300015373	Arabidopsis Rhizosphere	MVAPALAQTAGGTQNSGPQGTGNWLASKPEGNGNFVAGKPEGSGNFVAGATYHELHVSLEEMKRNRRATA
Ga0132255_1031456021	3300015374	Arabidopsis Rhizosphere	MVAPALAQTAGGTQNSGPQGTGNWLASKPEGNGNFVAGKPEGNGNFVAAKPKDRNQRAKASKL
Ga0132255_1037222632	3300015374	Arabidopsis Rhizosphere	MYRITARCRGRDTEISKMKTLKFALLAAGLLAVAPALAQTAGGTANTGPQGSGNFVAGKPEGN
Ga0066662_101452362	3300018468	Grasslands Soil	MKTLKLAVVAAGLLASAAAFAQTAGGTQNTGPQGSGNFVAGKPEGSGNFVAGKPEGSGNFVAGKPEGTGNPVAGKPATPAK
Ga0066662_105551191	3300018468	Grasslands Soil	MKTLKFALLAAGLLAAAPAFAQTAGGTPNTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPEGTGNPVAGKPKDPAK
Ga0066662_120280872	3300018468	Grasslands Soil	GGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGTGNFVAGKPEGTGNPVAGKPATPAK
Ga0066662_123158412	3300018468	Grasslands Soil	MKTLKLAVLTAGLLASATAFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGSGNFVAGKPEGTGNPVAGKPATPAK
Ga0066662_123253611	3300018468	Grasslands Soil	MKTLKFALVAAGLFAAAPAFAQTAGGTANTGPQGTGNFVAGKPEGSGNFVAGKPEGSGNFVA
Ga0066662_126521662	3300018468	Grasslands Soil	GGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGTGNFVAGKPEGTGNPVAGKPATSAK
Ga0213881_105289981	3300021374	Exposed Rock	MKTLKFALLAAGLLAVAPAFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPE
Ga0213881_105972232	3300021374	Exposed Rock	MMTLKFALLAAGLLAAAPTFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGSGNFVAGKPEGTGNPVAGKPRDPAK
Ga0213876_106768751	3300021384	Plant Roots	MNTFKLALVAAGLLASATAFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGTGNPVAGKPEGSGNPVAGKPATPAK
Ga0213875_101400422	3300021388	Plant Roots	MKTLKFALLAAGLLAVAPAFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPEGTGNPVAGKPKDPAK
Ga0213880_100481721	3300021953	Exposed Rock	LAQTAGNTPHTGPQGSGNFVAGKPEGSGNFVAGKPEGTGNFVAGKPEGTGNPVAGKPKDA
Ga0207713_12374671	3300025735	Switchgrass Rhizosphere	MKKLKLVVVAAGLLTSATAFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPEGTGNPVAGKPAAPAK
Ga0207692_111423021	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKTLKFALLAAGLLAAAPAFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPKDPAK
Ga0207710_105858492	3300025900	Switchgrass Rhizosphere	MKTLKFALLAAGLLAAAPAFAQTAGGTANTGPQGTGNFVAGQTNRIGTPVAGKPEGNGNFVAGKPEGNGNFVAGKPKDRNN
Ga0207693_112709211	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKTLKFALLAAGLLAVAPALAQTAGGTANTGPQGTGNFVAGKPEGSGNFVAGKPEGTGNFVAGKPEGNS
Ga0207700_108222051	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MKMMKFALLAAGLLAVAPAFAQTAGGTANTGPQGSGNFVAGKPEGNGNFVAGQTGRIGTPVAGKPEGNGNFVAGKPKDRE
Ga0207661_101869212	3300025944	Corn Rhizosphere	SATSFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPEGTGNPVAGKPAAPAK
Ga0207679_118963162	3300025945	Corn Rhizosphere	AGLLAVAPAFAQTAGGTANTGPQGSGNFVAGKPEGNGNFVAGQTGRIGTPVAGKPEGNGNFVAGKPKDRE
Ga0209577_103539981	3300026552	Soil	MKTLKLAVVAAGLLASATAFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGTGNFVAGKPEGTGNPVAGKPATSAK
Ga0307276_100769252	3300028705	Soil	MKTLKLAVVAAGLLASAGAFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGTGNFVAGK
Ga0307291_11058382	3300028707	Soil	MKTLKFALLAAGLLAAAPAFAQTAGGTANTGPQGSGNFVAGKPEGNGNFVAGKPEGNGNFVAGKPKDRNN
Ga0307279_100962462	3300028709	Soil	MNAIKQTLLAAGLLTSLPVLAQTAGGTQNTGPQGTGNFVAGKPEGTGNPIAGQTGRMGTPVAGKPEGTGNPVAGQPVDKMEKK
Ga0307288_102112512	3300028778	Soil	MNAIKLTLLAAGFLTSLPVLAQTAGGTQNTGPQGTGNFVAGKPEGTGNPIAGQTGRMGTPVAGKPEGTGNPVAGQPVDKMEKK
Ga0307304_102512381	3300028885	Soil	MNAIKLTLLAAGLLTSLPVLAQTAGGTQNTGPQGTGNFVAGKPEGTGNPIAGQTGRMGTPVAGKPEGTGNPVAGQPVDKMEKK
Ga0308154_1031901	3300030986	Soil	MKTIKLAVLAAGLLASASAFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPEGTGNPIAGKPAAPRTPAK
Ga0308183_11829001	3300030988	Soil	RDRPLGRKWRTSMNTLKLAFVAAGLLAAAPAFAQTAGGTQNTGPQGTGNFVAGKPEGNGNFVAGKPEGNGNFVAGKPEGNGNFVAGKPRDRNN
Ga0308189_104130051	3300031058	Soil	AVSTATEISTMKTLKLAFLAAGLLAAAPAFAQTAGGTQNTGPQGTGNFVAGTPEGNGNFVAGQTNRIGTPVAGKPEGNGNFVAGKPKDPAK
Ga0308181_11352742	3300031099	Soil	LKLAFFAAGLLVAAPAFAQGTAGGTPNTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPEATSKPVGDKPAAPPK
Ga0308177_10108511	3300031423	Soil	MNILKLAFFAAGLLVAAPAFAQGTAGGTPNTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPEATSKPVGDKPAAPPK
Ga0308175_1005138732	3300031938	Soil	MKTLKFALLAAGLLAAAPAFAQTAGGTANTGPQGSGNFVAGKPEGNGNFVAGQTGRIGTPVAGKPEGNGN
Ga0308175_1011107892	3300031938	Soil	MKSLKFALLAAGLLAAAPAFAQTAGGTANTGPQGSGNFVAGKPEGNGNFVAGKPEGNGNFVAGKPEGNCNFVDG
Ga0308175_1016011322	3300031938	Soil	MKTLKLVVVAAGLLTSATSFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPEATSKPVGDKPAAPPK
Ga0308175_1018393402	3300031938	Soil	MKFAYIALAASLIPAAPALAQTAGGTQNTGPQGTGNFVAGQPEGTGNPVAGQNNRYGAPVAGQSEGTGNPVAGSKDKAR
Ga0308176_104456301	3300031996	Soil	IPAAPALAQTAGGTQNTGPQGTGNFVAGQPEGTGNPVAGQNNRYGAPVAGQSEGTGNPVAGSKDKAR
Ga0372943_0007528_575_823	3300034268	Soil	MKTLKFALVAAGLFAAAPAFAQTAGGTTNTGPQGTGNFVAGKPEGSGNFVAGKPEGSGNFVAGRPEGTGNPVAGKPKDPAAK
Ga0372943_0043345_2147_2404	3300034268	Soil	MYTLKLAVVAAGLLAAAPAFAQGTAGSTPNTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPEGTGNPVAGKPATPATPAK
Ga0372943_0106176_44_292	3300034268	Soil	MKTLKFALLAAGLLAAAPAFAQTAGGTANTGPQGTGNFVAGKPEGSGNFVAGKPEGTGNFVAGKPEGTGNPVAGKPKDPAAK
Ga0372943_0269551_821_1072	3300034268	Soil	MANWCSPPRKQLAVGHKWRIRMNKTKLILLAAGLLTSLPVLAQTAGGTQNTGPQGTGNFVAGQTGREGTPVAGKPEGTGNPVAG
Ga0372943_0764870_350_601	3300034268	Soil	MNTFKLTLLAAGLLTSLPVLAQTAGGTQNTGPQGTGNFVAGKPEGTGNPVAGQTGRMGTPVAGKPEGTGNPVAGQPSDKMEKK
Ga0372943_0810794_421_618	3300034268	Soil	AFAQGTAGSTPNTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPEGTGNPVAGKPKDPMAK
Ga0372943_0818665_350_598	3300034268	Soil	MKTLKFALLAAGLMAAAPAFAQTAGGTTNTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPEGTGNPVAGKPKDPMAK
Ga0372943_0940220_365_571	3300034268	Soil	VASASAFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGTGNFVAGKPEGTGNPVAGKPATPAK
Ga0370548_064143_245_532	3300034644	Soil	LLFGVKDGETSMKTIKLAVLAAGLLASASAFAQTAGGTQNTGPQGTGNFVAGKPEGSGNFVAGKPEGNGNFVAGKPEGTGNPIAGKPAAPRTPAK
Ga0370548_151687_221_466	3300034644	Soil	MKTLKLAFLAAGLLAAAPAFAQTAGGTQNTGPQGTGNFVAGKPEGNGNFVAGQTNRIGTPVAGKPEGNGNFVAGKPKDPAK

Hidden Markov Model


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