Metagenome / Metatranscriptome Family F084051

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084051
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	104 residues
Representative Sequence	MATAGDRGEQRSVGIAPVRARGRTYWFPERGSYTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD
Number of Associated Samples	82
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.43 %
% of genes near scaffold ends (potentially truncated)	44.64 %
% of genes from short scaffolds (< 2000 bps)	95.54 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.429 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (33.929 % of family members)
Environment Ontology (ENVO)	Unclassified (36.607 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.893 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.54% β-sheet: 8.96% Coil/Unstructured: 48.51%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF09954	DUF2188	8.93
PF05532	CsbD	3.57
PF14019	DUF4235	3.57
PF03861	ANTAR	0.89
PF02776	TPP_enzyme_N	0.89
PF10099	RskA	0.89
PF06165	Glyco_transf_36	0.89
PF03706	LPG_synthase_TM	0.89
PF00005	ABC_tran	0.89
PF05974	DUF892	0.89
PF00069	Pkinase	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.57
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	3.57
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.89
COG3459	Cellobiose phosphorylase	Carbohydrate transport and metabolism [G]	0.89
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.89
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.43 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.43 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.43 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	86.61 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	86.61 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	72.32 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	56.25 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	16.07 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	56.25 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	16.07 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	56.25 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	9.82 %
Plantactinospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Plantactinospora	3.57 %
Unclassified	root	N/A	3.57 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	2.68 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	56.25 %
Micromonospora lupini	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora lupini	4.46 %
Unclassified	root	N/A	3.57 %
unclassified Plantactinospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Plantactinospora → unclassified Plantactinospora	2.68 %
Micromonospora tulbaghiae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora tulbaghiae	2.68 %
Micromonospora chersina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora chersina	1.79 %
Actinoplanes liguriensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes liguriensis	0.89 %
Actinoplanes cyaneus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes cyaneus	0.89 %
Actinoplanes missouriensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes missouriensis	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	56.25 %
Micromonospora lupini	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora lupini	4.46 %
Unclassified	root	N/A	3.57 %
Plantactinospora sp. BC1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Plantactinospora → unclassified Plantactinospora → Plantactinospora sp. BC1	2.68 %
Micromonospora tulbaghiae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora tulbaghiae	2.68 %
Micromonospora chersina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora chersina	1.79 %
Actinoplanes liguriensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes liguriensis	0.89 %
Actinoplanes cyaneus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes cyaneus	0.89 %
Actinoplanes missouriensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes missouriensis	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0995462	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
2228664021\|ICCgaii200_c0996047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1365	Open in IMG/M
2228664022\|INPgaii200_c0689174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes cyaneus	574	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_10899448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	723	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101697551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2068	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105829370	Not Available	615	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105830124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1102	Open in IMG/M
3300000787\|JGI11643J11755_11046638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300000956\|JGI10216J12902_102105958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1064	Open in IMG/M
3300000956\|JGI10216J12902_102486239	All Organisms → cellular organisms → Bacteria	2904	Open in IMG/M
3300000956\|JGI10216J12902_103279374	All Organisms → cellular organisms → Bacteria	1777	Open in IMG/M
3300000956\|JGI10216J12902_107254341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes missouriensis	615	Open in IMG/M
3300000956\|JGI10216J12902_111441966	All Organisms → cellular organisms → Bacteria	3072	Open in IMG/M
3300003321\|soilH1_10137539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1143	Open in IMG/M
3300003324\|soilH2_10206464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1591	Open in IMG/M
3300004114\|Ga0062593_100343345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1300	Open in IMG/M
3300004114\|Ga0062593_101959277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300004156\|Ga0062589_100757217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	872	Open in IMG/M
3300004156\|Ga0062589_102035292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora lupini	583	Open in IMG/M
3300004157\|Ga0062590_100139746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1634	Open in IMG/M
3300004157\|Ga0062590_100224355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1386	Open in IMG/M
3300004463\|Ga0063356_101099480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1145	Open in IMG/M
3300004479\|Ga0062595_100607144	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300004479\|Ga0062595_101757924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora lupini	587	Open in IMG/M
3300004479\|Ga0062595_102407540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora lupini	522	Open in IMG/M
3300004480\|Ga0062592_100696708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	883	Open in IMG/M
3300004643\|Ga0062591_101278411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	720	Open in IMG/M
3300005093\|Ga0062594_100271298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1262	Open in IMG/M
3300005093\|Ga0062594_100945355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	821	Open in IMG/M
3300005329\|Ga0070683_100445855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1235	Open in IMG/M
3300005354\|Ga0070675_100817019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	852	Open in IMG/M
3300005366\|Ga0070659_102035222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora lupini	516	Open in IMG/M
3300005456\|Ga0070678_100573805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1004	Open in IMG/M
3300005564\|Ga0070664_101445881	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300005577\|Ga0068857_101703933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	616	Open in IMG/M
3300005616\|Ga0068852_100916999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora lupini	893	Open in IMG/M
3300005618\|Ga0068864_101454573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300005719\|Ga0068861_100462617	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300005888\|Ga0075289_1077220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300006755\|Ga0079222_12646803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora tulbaghiae	505	Open in IMG/M
3300006806\|Ga0079220_11402840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	593	Open in IMG/M
3300006806\|Ga0079220_11787365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300006954\|Ga0079219_10089176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1477	Open in IMG/M
3300009094\|Ga0111539_11928655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300009156\|Ga0111538_11660885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	805	Open in IMG/M
3300010371\|Ga0134125_10669810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1145	Open in IMG/M
3300010375\|Ga0105239_11441869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	795	Open in IMG/M
3300010399\|Ga0134127_13065194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora chersina	545	Open in IMG/M
3300011003\|Ga0138514_100098807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300012201\|Ga0137365_10500469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	893	Open in IMG/M
3300012212\|Ga0150985_101355900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300012212\|Ga0150985_120986167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora tulbaghiae	518	Open in IMG/M
3300012350\|Ga0137372_10043983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4001	Open in IMG/M
3300012469\|Ga0150984_108365556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora tulbaghiae	637	Open in IMG/M
3300012469\|Ga0150984_116964961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300012906\|Ga0157295_10067933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	899	Open in IMG/M
3300012916\|Ga0157310_10469959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	540	Open in IMG/M
3300012986\|Ga0164304_11146239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	625	Open in IMG/M
3300012988\|Ga0164306_10957988	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300012989\|Ga0164305_10529746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	933	Open in IMG/M
3300013096\|Ga0157307_1035630	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300013306\|Ga0163162_10080553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3324	Open in IMG/M
3300014326\|Ga0157380_12652076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora chersina	567	Open in IMG/M
3300019356\|Ga0173481_10706123	Not Available	545	Open in IMG/M
3300019361\|Ga0173482_10372345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300019362\|Ga0173479_10289865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	740	Open in IMG/M
3300020002\|Ga0193730_1187395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300020077\|Ga0206351_10488803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300020078\|Ga0206352_10560188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300022756\|Ga0222622_10475161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	890	Open in IMG/M
3300022898\|Ga0247745_1069629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300025901\|Ga0207688_10076722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1903	Open in IMG/M
3300025915\|Ga0207693_11056490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300025918\|Ga0207662_11345627	Not Available	507	Open in IMG/M
3300025932\|Ga0207690_10465185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1018	Open in IMG/M
3300025933\|Ga0207706_10570576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	973	Open in IMG/M
3300025945\|Ga0207679_11248476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	682	Open in IMG/M
3300025960\|Ga0207651_11632026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300026078\|Ga0207702_12023758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300026118\|Ga0207675_100725868	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300027775\|Ga0209177_10476137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300027775\|Ga0209177_10493904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300028705\|Ga0307276_10151591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300028713\|Ga0307303_10047923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	899	Open in IMG/M
3300028714\|Ga0307309_10079740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	756	Open in IMG/M
3300028768\|Ga0307280_10105620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	940	Open in IMG/M
3300028771\|Ga0307320_10222513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300028784\|Ga0307282_10412748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300028807\|Ga0307305_10139672	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300028819\|Ga0307296_10300155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	876	Open in IMG/M
3300028819\|Ga0307296_10708994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300028824\|Ga0307310_10045596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1815	Open in IMG/M
3300028824\|Ga0307310_10757295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes liguriensis	500	Open in IMG/M
3300030902\|Ga0308202_1126210	Not Available	551	Open in IMG/M
3300030903\|Ga0308206_1083059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300030903\|Ga0308206_1152047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Plantactinospora → unclassified Plantactinospora → Plantactinospora sp. BC1	558	Open in IMG/M
3300030905\|Ga0308200_1019687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1068	Open in IMG/M
3300030993\|Ga0308190_1194405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300031039\|Ga0102760_10686170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	566	Open in IMG/M
3300031039\|Ga0102760_10751468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300031058\|Ga0308189_10053690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1130	Open in IMG/M
3300031058\|Ga0308189_10196963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	727	Open in IMG/M
3300031058\|Ga0308189_10376903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300031058\|Ga0308189_10385599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300031091\|Ga0308201_10038018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1140	Open in IMG/M
3300031091\|Ga0308201_10151038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	727	Open in IMG/M
3300031091\|Ga0308201_10176841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Plantactinospora → unclassified Plantactinospora → Plantactinospora sp. BC1	689	Open in IMG/M
3300031091\|Ga0308201_10284104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300031092\|Ga0308204_10041906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Plantactinospora	1074	Open in IMG/M
3300031092\|Ga0308204_10062624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	938	Open in IMG/M
3300031092\|Ga0308204_10185795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300031092\|Ga0308204_10246921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Plantactinospora → unclassified Plantactinospora → Plantactinospora sp. BC1	577	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.68%
Host-Associated	Host-Associated	22.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.79%
Plants	Host-Associated → Plants	22.32%
Aquatic	Environmental → Aquatic	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.71%
Sediment	Environmental → Aquatic → Sediment	0.89%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.32%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.04%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.57%
Loam	Environmental → Terrestrial → Soil → Loam	2.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.89%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.29%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	19.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	33.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	11.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.79%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020077	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031039	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 6C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_09954621	2228664021	Soil	MATAGDRGEQRSVGIAPVRARGRTYWFPERGSHTSETKPFYLTSEFLVFALYLMGLGVAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD
ICCgaii200_09960473	2228664021	Soil	RGRTYWFPERGSHTSETKPFYLTSEFLVFALYLMGLGVAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD
INPgaii200_06891741	2228664022	Soil	VGIAPVRARGRTYWFPERGSYTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD
ICChiseqgaiiFebDRAFT_108994482	3300000363	Soil	MATVSGGGEQRAAGITPVRVRGRTYWFPERGSYTSETKPFYLTSEFLVFAFYLIGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD*
INPhiseqgaiiFebDRAFT_1016975513	3300000364	Soil	MATAGDRGEQRSVGIAPVRARGRTYWFPERGSYTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD*
INPhiseqgaiiFebDRAFT_1058293701	3300000364	Soil	MATPERDRGQRTGIAVVRRRALFPVHGDYSSETKPFYLTSEFLVYAIYVIGLGIAAATDATIDSRFFWIFATVATAAYILSRGIA
INPhiseqgaiiFebDRAFT_1058301241	3300000364	Soil	MATPERDRGQRTGIAVVRRRALFPVHGDYSSETKPFYLTSEFLVYAIYVIGLGIAAATDATIDSRFFWIFATVATAAYILSRGIAKAATRSRAHDPREDIDLGRD*
JGI11643J11755_110466382	3300000787	Soil	MATAGDRGEQRAVGIAPVRRGRSYWFPERGSYTSETKPFYLTSEFLVFGLYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD*
JGI10216J12902_1021059581	3300000956	Soil	AADSPFRRLRNAEREPELDDGGRSMATAGSGGEQRAEIGIARVRARGRTYWFPERGSHTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD*
JGI10216J12902_1024862391	3300000956	Soil	MATAGEGERRAIGIAPVRGRTYWFPERGSYTSETKPFYLTSEFLVFGLYLMGLGIAAATSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD*
JGI10216J12902_1032793743	3300000956	Soil	MATAGDRGEQRAIGIAPVRGRTYWFPERGSYTSETKPFYLTSEFLVFGLYLMGLGIAAATSPSIDARLFWILTTVAVVGYMLSRGIAKSASRSRAHDPREDIDLGRD*
JGI10216J12902_1072543411	3300000956	Soil	PVRARGRTYWFPERGSYTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD*
JGI10216J12902_1114419666	3300000956	Soil	MATAGSSRDRPAAAVRMRGRTYWFPERGAYSSETKPFYLTSEFLVFGLYLMGLGIAAATSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIDLGGD*
soilH1_101375393	3300003321	Sugarcane Root And Bulk Soil	MSSGTPSGEQRSVGIAPVRGRRAALFPVHRDYTSETKPFYLTSEFLVFALYLMGLGIAAGTDATIDARMFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIDIGRD*
soilH2_102064643	3300003324	Sugarcane Root And Bulk Soil	MTSTEGGTLDHGAAGTGPTRSRRDQWFPSRTTYTSETKPFYLTSEFLVFVLYVMGLGVSASTDATIDSRLFWILTTVATAAYMLSRGIAKAATRSRAHDPREDIDLGR*
Ga0062593_1003433454	3300004114	Soil	MSTGSSYEGRSGAGAVRGRRIVWFPARADFSSETKPFYLTSEFLVFALYLMGLAIAASTSPSIDARLFWILATVAVAAYIISRGIAKAATRSRAYDPREDVGRD*
Ga0062593_1019592772	3300004114	Soil	MATPAGGRGEERSIGIAPVRRVKLFPVRGDYTSETKPFYLTSEFLVYAVFMIGLGIAAATDATIDSRFFWIWGTVATAAYMLSRGIA
Ga0062589_1007572173	3300004156	Soil	MATAGEGERRAIGIAPVRGRTYWFPDRSSHTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD*
Ga0062589_1020352921	3300004156	Soil	MSTGSSYEGRSGAGAVRGRRIVWFPARADYSSETKPFYLTSEFLVFALYLMGLAIAASTSPSIDARLFWILATVAVAAYIISRGIAKAATRSRAYDPREDVGRD*
Ga0062590_1001397464	3300004157	Soil	MATAGDRGDQRSVGIAPVRARGRTYWFPERGSHTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIDIGKD*
Ga0062590_1002243552	3300004157	Soil	MATPAGDRGERRSIGIASVRRRAMFPVHGDYTSETKPFYLTSEFLVYALYMIGLGIAAATDATIDSRFFWIFATVATAAYVLSRGIAKAATRSRARDPREDIDPGRD*
Ga0063356_1010994802	3300004463	Arabidopsis Thaliana Rhizosphere	MATSGSSYEESGAGRVGGMRRTAWLVPRRAGTSETKPFYLTSEFLVFGLYLMGLGIAAATSPSIDARLFWILATIVAAAYMLSRGIAKAATRSRAYDPREDIGRD*
Ga0062595_1006071443	3300004479	Soil	MATAGDRGDQRSVGIAPVRARGRTYWFPERGSHTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIDIGKN*
Ga0062595_1017579241	3300004479	Soil	MATPERDRGQGSGITVMRRRALFPVHGDHTSETKPFYLTSEFLVYALYMIGLGIAAATDATIDSRFFWIWGTVATVAYILSRGIAKSATRSRAHDPREDIDIGRNG*
Ga0062595_1024075401	3300004479	Soil	MSSGVPSGDERSIGIAPVRVRRAALFPVRGDYTSETKPFYLTSEFLVFALYLMGLGIAAGTDATIDARMFWVLATVAVVGYMLSRGIAKAATRSRAHDPREDIDIGSS*
Ga0062592_1006967083	3300004480	Soil	MATPAGDRGERRSIGIASVRRRAMFPVHGDYTSETKPFYLTSEFLVYALYMIGLGIAAATDATIDSRFFWIFATVATAAYMLSRGIAKAATRSRAHDPREDIDLGRD*
Ga0062591_1012784111	3300004643	Soil	MATPERDQGQRTGIAVVRRRALFPVHGDYSSETKPFYLTSEFLVYAIYMIGLGIAAATDATIDSRFFWIFATVATAAYILSRGIAKAATRSRAHDPREDI*
Ga0062594_1002712982	3300005093	Soil	MATAGDRGEQRSVGIAPVRARGRTYWFPERGSHTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIDIGTD*
Ga0062594_1009453552	3300005093	Soil	MATAGDRGERRGVGIAPVRGRTYWFPERGSYTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD*
Ga0070683_1004458552	3300005329	Corn Rhizosphere	MATAGDRGDQRSVGIAPVRARGRTYWFPERGSHTSETKPFYLTSEFLVFALYLMGLGVAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD*
Ga0070675_1008170191	3300005354	Miscanthus Rhizosphere	MSSGAPSGDERSIGIAPVRGRRALLPVHGDYTSETKPFYLTSEFLVFALYLMGLGIAAGTDATIDARMFWVLATVAVVGYMLSRGIAKAATRSRAHDPREDIDIGPS*
Ga0070659_1020352221	3300005366	Corn Rhizosphere	MATPAGDRGQRTGIAVVRRRAMFPVHGDYTSETKPFYLTSEFLVYALYMIGLGIAAATDATIDSRFFWIFATVATAAYMLSRGIAKAATRSRAHDPREDIDPGRD*
Ga0070678_1005738051	3300005456	Miscanthus Rhizosphere	MSSGAPSGGDRSIGIAPVRVRRAALFPVRGDYTSETKPFYLTSEFLVFALYLMGLGIAAGTDATIDARMFWVLATVAVVGYMLSRGIAKAATRSRAHDPREDIDIGSS*
Ga0070664_1014458811	3300005564	Corn Rhizosphere	MATAGDRGDQRSVGIAPVRARGRTYWFPERGSHTSETKPFYLTSEFLVFALYLMGLGVAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSR
Ga0068857_1017039331	3300005577	Corn Rhizosphere	DRGDQRSVGIAPVRARGRTYWFPERGSHTSETKPFYLTSEFLVFALYLMGLGVAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD*
Ga0068852_1009169993	3300005616	Corn Rhizosphere	APVRGRTYWFPERGSYTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD*
Ga0068864_1014545732	3300005618	Switchgrass Rhizosphere	MSSGVPSGDERSIGIAPVRVRRAALFPVRGDYTSETKPFYLTSEFLVFALYLMGLGIAAGTDATIDARMFWVLATVAVVGYMLSRGIAKAATRSRAHDPREDIDIGPS*
Ga0068861_1004626171	3300005719	Switchgrass Rhizosphere	MATAGDRGERRGVGIAPVRGRTYWFPERGSYTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAAT
Ga0075289_10772201	3300005888	Rice Paddy Soil	MATPGQSEGQRVGIGIAPVRTGRAYWFPERSSYTSETKPFYLTSEFLVFAIYLIGLGIAAATSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAYDPREDIGEDSTSSR*
Ga0079222_126468031	3300006755	Agricultural Soil	MATAGDQGERRSIGIAPVRRRPLFPVHGDYTSETKPFYLTSEFLVYAFYMIGLGIAAATDATIDSRFFCIFGTVATAAYILSRGIAKAATRSRAHDPREDIGRD*
Ga0079220_114028401	3300006806	Agricultural Soil	MSSGTPSGEQRSVGIAPVRGRRAALFPVHRDYSSETKPFYLTSEFLVFALYLMGLGIAAGTDATIDARMFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIDIGRD*
Ga0079220_117873651	3300006806	Agricultural Soil	GPMATPERDRRQGSGIAVIRRRALFPVHGDYTSETKPFYLTSEFLVYAIYMIGLGIAAGTDATIDSRFFWIWGTVATVAYILSRGIAKAATRSRAHDPREDIGRD*
Ga0079219_100891761	3300006954	Agricultural Soil	MATPERDRRQGSGIAVIRRRALFPVHGDYTSETKPFYLTSEFLVYAIYMIGLGIAAGTDATIDSRFFWIWGTVATVAYILSRGIAKAATRSRAHDR
Ga0111539_119286551	3300009094	Populus Rhizosphere	MATGGSYEGRSGVGVGRGRRIIWFPPRSDYTSETKPFYLTSEFLVFALYLMGLAIAASTSPSIDARLFWILATIAVAAYIISRGIAKAATRSRAYDP
Ga0111538_116608852	3300009156	Populus Rhizosphere	MATGGSYEGRSGVGVGRGRRIIWFPPRSDYTSETKPFYLTSEFLVFALYLMGLAIAASTSPSIDARLFWILATIAVAAYIISRGIAKAATRSRAYDPREDVGRD*
Ga0134125_106698103	3300010371	Terrestrial Soil	VELEAERDDGGNSMATVSGGGEQRAAGITPVRVRGRTYWFPERGSYTSETKPFYLTSEFLVFAFYLIGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD*
Ga0105239_114418693	3300010375	Corn Rhizosphere	MATSRSSYEESGAGRVGGMRRTAWLVPRRAGTSETKPFYLTSEFLVFGLYLMGLGIAAATSPSIDARLFWILATIVAAAYMLSRGIAKAATRSRAYDPRE
Ga0134127_130651941	3300010399	Terrestrial Soil	RETQFDNGGSSMATAGDRGEQRSVGITPVRVRGRTYWFPERGSHTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIDIGTD
Ga0138514_1000988071	3300011003	Soil	MATTGGSYEERPAAAGGTMQGSGLRRTAWLPARQDYSSETKPFYLTSEFLVFALYLMGLAIAASTSPSIDARLFWILATVAVAAYMLSRGIAKAATRSRAHDPREDIDVGRD*
Ga0137365_105004691	3300012201	Vadose Zone Soil	MSEHASRPESEDQGGDMTTSGSSYEQRGAGRVSGVRRTAWFPSRESYTSETKPFYLTSEFLVFALYLMGLAIAAATSPSIDARLFWILATIVAAAYMLSRGIAKA
Ga0150985_1013559002	3300012212	Avena Fatua Rhizosphere	MATTGSDYEGRPSAGMGRGRRMVWFPARHEYTSETKPFYLTSEFLVFGLYLMGLGIAASTSPSIDARLFWILATIAVVAYILSRGIAKAATRSRAYDPREDVGRD*
Ga0150985_1209861671	3300012212	Avena Fatua Rhizosphere	RKSMATPGEQREIGIAPVRRRPLFPVRGDYTSETKPFYLTSEFLVFALYLMGLGIAAGTDSTIDARFFWVFATVAVVGYMLSRGIAKAATRSRAHDPREDIDLGRD*
Ga0137372_100439836	3300012350	Vadose Zone Soil	MTTSGSSYEQRGAGRVSGVRRTAWFPSRESYTSETKPFYLTSEFLVFALYLMGLAIAAATSPSIDARLFWILATIVAAAYMLSRGIAKAATRSRAYDPREDIGRD*
Ga0150984_1083655561	3300012469	Avena Fatua Rhizosphere	MATPGEQREIGIAPVRRRPLFPVRGDYTSETKPFYLTSEFLVFALYLMGLGIAAGTDSTIDARFFWVFATVAVVGYMLSRGIAKAATRSRAHDPREDIDLGRD*
Ga0150984_1169649612	3300012469	Avena Fatua Rhizosphere	MASTGGSYPQRTPGQGSRFTSDRSAWFPRRVDYTSETKPFYLTSEFLVFVLYEMGLGIAAGSSPTIDARLFWILTTAATIGYMLARGIAKA
Ga0157295_100679331	3300012906	Soil	MATAGDRGERRGVGIAPARGRTYWFPERGSYTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD*
Ga0157310_104699591	3300012916	Soil	FDNGGSSMATAGDRGDQRSVGIAPVRARGRTYWFPERGSHTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD*
Ga0164304_111462391	3300012986	Soil	MATVSGGGEQRAAGMTPVRVRGRTYWFPERGSYTSETKPFYLTSEFLVFAFYLIGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD*
Ga0164306_109579882	3300012988	Soil	AGMTPVRVRGRTYWFPERGSYTSETKPFYLTSEFLVFAFYLIGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD*
Ga0164305_105297462	3300012989	Soil	MATVSGGGEQRAAGMTPVRVRGRTYWFPERGSYTSETKPFYLTSEFLVFAFYLIGFGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD*
Ga0157307_10356303	3300013096	Soil	MATAGDRGERRGVGIAPARGRTYWFPERGSYTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDP
Ga0163162_100805535	3300013306	Switchgrass Rhizosphere	MATAGDRGERRGVGIAPVRGRTYWFPERGSYTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPRED
Ga0157380_126520761	3300014326	Switchgrass Rhizosphere	MATAGDRGEQRSVGIAPVRVRGRTYWFPERGSHTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD*
Ga0173481_107061231	3300019356	Soil	MATPAGDRGQRTGIAVVRRRAMFPVHGDYTSETKPFYLTSEFLVYAIFMIGLGIAAATDATIDSRFFWVWGT
Ga0173482_103723451	3300019361	Soil	MATPTGDRGERRAIGIAPVRRRAMFPVHGDYSSETKPFYLTSEFLVYAIFMIGLGIAAATDATIDSRFFWVWGTVATAAYMLSRGVAKAG
Ga0173479_102898652	3300019362	Soil	MATAGDRGERRGVGIAPVRGRTYWFPERGSYTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLIRGIAKAATRSRAHDPREDIGD
Ga0193730_11873951	3300020002	Soil	TTGGSYEERPAAAGGTMQGRGIRRTAWLPARQDYSSETKPFYLTSEFLVFALYLMGLAIAASTSPSIDARLFWILATVAVAAYMLSRGIAKAATRSRAHDPREDIDVGRD
Ga0206351_104888032	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	MATAGDRGDQRSVGIAPVRARGRMYWFPERGSYTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSR
Ga0206352_105601882	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MSSGVPSGDERSIGIAPVRVRRAALFPVRGDYTSETKPFYLTSEFLVFALYLMGLGIAAGTDATIDARMFWVLATVAVVGYMLSRGIAKAATRSRAHDPREDIDIGPS
Ga0222622_104751612	3300022756	Groundwater Sediment	MATAGNRGEQRSVGIAPVRVRGRTYWFPERGSYTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD
Ga0247745_10696291	3300022898	Soil	MATAGDRGERRGVGIAPVRGRTYWFPERGSYTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD
Ga0207688_100767223	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MATPAGDRGERRSIGIASVRRRAMFPVHGDYTSETKPFYLTSEFLVYALYMIGLGIAAATDATIDSRFFWIFATVATAAYVLSRGIAKAATRSRARDPREDIDPGRD
Ga0207693_110564902	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MATAGNRGEQRSVGIAPVRVRGRTYWFPERGSYTSETKPFYLTSEFLVFVLYLMGLGISASTDSTIDARLFWILTTIAASAYMLSRGIAKAATRSRAHDPREDIDPGRD
Ga0207662_113456271	3300025918	Switchgrass Rhizosphere	MATPTGDRGERRSIGIAPVRRRAMFPVHGDYSSETKPFYLTSEFLVYAIFMIGLGIAAATDATIDSRFFWVWGTVATAAYMLSRG
Ga0207690_104651854	3300025932	Corn Rhizosphere	MATAGDRGERRGVGIAPVRGRTYWFPERGSYTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAH
Ga0207706_105705761	3300025933	Corn Rhizosphere	MATPAGDRGQRTGIAVVRRRAMFPVHGDYTSETKPFYLTSEFLVYALYMIGLGIAAATDATIDSRFFWIFATVATAAYMLSRGIAKAATRSRAHDPREDIDLGRD
Ga0207679_112484762	3300025945	Corn Rhizosphere	MATAGDRGDQRSVGIAPVRARGRTYWFPERGSHTSETKPFYLTSEFLVFALYLMGLGVAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD
Ga0207651_116320261	3300025960	Switchgrass Rhizosphere	GSAMATAGDRGERRGVGIAPVRGRTYWFPERGSYTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD
Ga0207702_120237582	3300026078	Corn Rhizosphere	MATAGDRGERRGVGIAPVRGRTYWFPERGSYTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPRE
Ga0207675_1007258682	3300026118	Switchgrass Rhizosphere	MATPAGGRGEERSIGIAPVRRVKLFPVRGDYTSETKPFYLTSEFLVYALYMIGLGIAAATDATIDSRFFWIFATVATAAYVLSRGIAKAATRSRARDPREDIDPGRD
Ga0209177_104761371	3300027775	Agricultural Soil	MSSGTPSGEQRSVGIAPVRGRRAGLFPVHRDYTSETKPFYLTSEFLVFALYLMGLGIAAGTDATIDARMFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIDIGRD
Ga0209177_104939041	3300027775	Agricultural Soil	MATPERDRRQGSGIAVIRRRALFPVHGDYTSETKPFYLTSEFLVYAIYMIGLGIAAGTDATIDSRFFWIWGTVATVAYILSRGIAKAA
Ga0307276_101515911	3300028705	Soil	MATPAGDQGQRRSIGIAPVRRRALFPVHGDHTSETKPFYLTSEFLVYALYMIGLGIAAGTDATIDARFFWIWSTVATAAYMLSRGIAKAATRSRAHDPREDIDLGRD
Ga0307303_100479233	3300028713	Soil	MATSGSGHEQAGAGRTGGIRRTAWLAPGRDHTSETKPFYLTSEFLVFGLYLMGLGIAASTSPSIDARLFWILATIAASAYMLSRGIAKAATRSRAHDPREDIGSDSP
Ga0307309_100797401	3300028714	Soil	SIGIAPVRRRALFPVHGDHTSETKPFYLTSEFLVYALYMIGLGIAAGTDATIDARFFWIWSTVATAAYMLSRGIAKAATRSRAHDPREDIDLGRD
Ga0307280_101056202	3300028768	Soil	PTDVPLLIRRFGDCETRNERRNSITEVAMATAGNRGEQRSVGIAPVRVRGRTYWFPERGSYTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD
Ga0307320_102225132	3300028771	Soil	MATTSGESYEGRPAAGGGSTRVRGRTAWLPARQDYTSETKPFYLTSEFLVFALYLMGLAIAASTSPSIDARLFWILATVAVAAYMLSRGIAKAATRSRAHDPREDIDLGRD
Ga0307282_104127482	3300028784	Soil	TRATTGDSYEERPAAAGGTMQGRGIRRTAWLPARQDYSSETKPFYLTSEFLVFALYLMGLAIAASTSPSIDARLFWILATVAVAAYMLSRGIAKAATRSRAHDPREDIDVGRD
Ga0307305_101396724	3300028807	Soil	MATTGGSYEERPAAAGGTMQGRGMMQGRGIRRTAWLPARQDYSSETKPFYLTSEFLVFALYLMGLAIAASTSPSIDARLFWILATVAVAAYMLSRGIAKAATR
Ga0307296_103001552	3300028819	Soil	MATASGGGGEQRAAGMTPVRIRGRTYWFPERGSYTSETKPFYLTSEFLVFAFYLIGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD
Ga0307296_107089942	3300028819	Soil	MATTGGSYEERPAAAGGTMQGRGIRRTAWLPARQDYSSETKPFYLTSEFLVFALYLMGLAIAASTSPSIDARLFWILATVAVAAYMLSRGIAKAATRSRAHDPREDIDV
Ga0307310_100455963	3300028824	Soil	MATPAGDQGQRRSIAIAPVRRRALFPVHGDHTSETKPFYLTSEFLVYALYMIGLGIAAGTDATIDARFFWIWSTVATAAYMLSRGIAKAATRSRAHDPREDIDLGRD
Ga0307310_107572951	3300028824	Soil	MATTGGSYEERPAAAGGTMQGRGMMQGRGIRRTAWLPARQDYSSETKPFYLTSEFLVFALYLMGLAIAASTSPSIDARLFWILATVAVAAYMLSRGIAKAATRSRAHDPRE
Ga0308202_11262101	3300030902	Soil	MATPTGDQGQRRSIGIAPVRRRAPFPVHGDHTSETKPFYLTSEFLVYALYMIGLGIAAGTDATIDARFFWIWSTVATAAYML
Ga0308206_10830591	3300030903	Soil	MATSGSGHEQAGAGRTGGISRTAWLAPRRDHTSETKPFYLTSEFLVFGLYLMGLGIAASTSPSIDARLFWILATIAASAYMLSRGIAKAATRSRAHDPREDIGSDSP
Ga0308206_11520471	3300030903	Soil	SMATARGGGEQRAVGIAPVRIRGRTYWFPERGSYTSETKPFYLTSEFLVFAFYLIGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD
Ga0308200_10196871	3300030905	Soil	MATPAGDQGQRRSIGIAPVRRRAPFPVHGDHTSETKPFYLTSEFLVYALYMIGLGIAAGTDATIDARFFWIWSTVATAAYMLSRGIAKAATRSRAHDPREDIDLGRD
Ga0308190_11944051	3300030993	Soil	MATPGSSSEDRPGAVRVSAVRRSAWFPARHDYTSETKPFYLTSEFLVFALYLMGLAIAASTSPSIDARFFWIWATVAVVGYMLSRGIAKAATCSRAHDPREDIDLGRD
Ga0102760_106861702	3300031039	Soil	DEMAARESSGSTAGAQRVQMARRTVWLPARADYTSETKPFYLTSEFLVYALFMIGLGIAAGTDATIDSRFFWVWGTIATVAYMLSRGVAKAGTRSRAHDPREDVDLGRD
Ga0102760_107514682	3300031039	Soil	MSSGTPSGEQRSVGIAPVRARRAALFPVHRDYTSETKPFYLTSEFLVFALYLMGLGIAAGTDATIDARMFWILATIAVVGYMLSRGIAKAATRSRAHDPREDIDIGS
Ga0308189_100536901	3300031058	Soil	EGGTRGMATPAGDQGQRRSIGIAPVRRRAPFPVHGDHTSETKPFYLTSEFLVYALYMIGLGIAAGTDATIDARFFWIWSTVATAAYMLSRGIAKAATRSRAHDPREDIDLGRD
Ga0308189_101969631	3300031058	Soil	RTDMATPAGDRGGRRSIGIAPVRGRALFPVHGDHTSETKPFYLTSEFLVYAIFMIGLGIAAATDATIDSRFFWTFATIATVAYILSRGIAKAATRSRAHDPREDIGRD
Ga0308189_103769031	3300031058	Soil	TREETTMATPGSSSEDRPGAVRVSAVRRSAWFPAGRDYTSETKPFYLTSEFLVFALYLMGLGISASTSPSIDARLFWILTTIAVAAYLLSRGIAKAATRSRAHDPREDIGLQ
Ga0308189_103855991	3300031058	Soil	MATTGSNYEDRPGAGTGRVPVRRTAWFPARQDYSSETKPFYLTSEFLVFALYVMGLGIAASTSPSIDARLFWILTTIVVAAYLLSRGIAKAATRSRAHDPREDIDLGRD
Ga0308201_100380183	3300031091	Soil	TRGMATPAGDQGQRRSIGIAPVRRRALFPVHGDHTSETKPFYLTSEFLVYALYMIGLGIAAGTDATIDARFFWIWSTVATAAYMLSRGIAKAATRSRAHDPREDIDLGRD
Ga0308201_101510381	3300031091	Soil	MATTGGSYEERPAAAGGTMQGRGIRRTAWLPARQDYSSETKPFYLTSEFLVFALYLMGLAIAASTSPSIDARLFWILATVAVAAYMLSRGIAKAATRSRAHDPREDIDVGRD
Ga0308201_101768411	3300031091	Soil	EAERDDGGNSMATARGGGEQRAVGIAPVRIRGRTYWFPERGSYTSETKPFYLTSEFLVFAFYLIGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD
Ga0308201_102841042	3300031091	Soil	MATAGDRGEQRSVGIAPVRGRTYWFPERGSYTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD
Ga0308204_100419061	3300031092	Soil	EQRSVGIAPVRASGRMYWFPERGSYTSETKPFYLTSEFLVFALYLMGLGIAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD
Ga0308204_100626242	3300031092	Soil	GTRGMATPAGDQGQRRSIGIAPVRRRALFPVHGDHTSETKPFYLTSEFLVYALYMIGLGIAAGTDATIDARFFWIWSTVATAAYMLSRGIAKAATRSRAHDPREDIDLGRD
Ga0308204_101857951	3300031092	Soil	GGSYEDRPAGEAARRVSIARRTAWFPVRQDYTSETKPFYLTSEFLVFALYLMGLAIAASTSPTIDARLFWILATVAVAAYMLSRGIAKAATRSRAHDPREDIDPGRD
Ga0308204_102469211	3300031092	Soil	GGETRMATAGGRGEQRAEIGIAPVRARGRMYWFPERGSYTSETKPFYLTSEFLVFALYLMGLGVAASTSPSIDARLFWILATVAVVGYMLSRGIAKAATRSRAHDPREDIGD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084051

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences