NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F084050

Metagenome / Metatranscriptome Family F084050

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F084050
Family Type Metagenome / Metatranscriptome
Number of Sequences 112
Average Sequence Length 70 residues
Representative Sequence MKEIMLKRISLMLLLAIQALGGGAITLAHARDAVVAPPGFEARHDARCAILHDELRCALCHYASARVV
Number of Associated Samples 105
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 74.11 %
% of genes near scaffold ends (potentially truncated) 98.21 %
% of genes from short scaffolds (< 2000 bps) 84.82 %
Associated GOLD sequencing projects 99
AlphaFold2 3D model prediction Yes
3D model pTM-score0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(18.750 % of family members)
Environment Ontology (ENVO) Unclassified
(41.071 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 46.88%    β-sheet: 0.00%    Coil/Unstructured: 53.13%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.33
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF01261AP_endonuc_2 67.86
PF01135PCMT 10.71
PF12698ABC2_membrane_3 1.79
PF13185GAF_2 1.79
PF13304AAA_21 0.89
PF13437HlyD_3 0.89
PF00480ROK 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 10.71
COG2518Protein-L-isoaspartate O-methyltransferasePosttranslational modification, protein turnover, chaperones [O] 10.71
COG2519tRNA A58 N-methylase Trm61Translation, ribosomal structure and biogenesis [J] 10.71
COG4122tRNA 5-hydroxyU34 O-methylase TrmR/YrrMTranslation, ribosomal structure and biogenesis [J] 10.71
COG1940Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domainTranscription [K] 1.79

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002558|JGI25385J37094_10161522All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300002560|JGI25383J37093_10064007All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1158Open in IMG/M
3300002912|JGI25386J43895_10195292All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300004643|Ga0062591_100206811All Organisms → cellular organisms → Bacteria1448Open in IMG/M
3300005341|Ga0070691_10684641All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300005444|Ga0070694_100118793All Organisms → cellular organisms → Bacteria1894Open in IMG/M
3300005450|Ga0066682_10089729All Organisms → cellular organisms → Bacteria1919Open in IMG/M
3300005467|Ga0070706_100734894All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300005467|Ga0070706_101647406All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes585Open in IMG/M
3300005468|Ga0070707_102322951All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300005536|Ga0070697_101065435All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300005539|Ga0068853_102261034All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes527Open in IMG/M
3300005540|Ga0066697_10706741All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300005544|Ga0070686_100013590All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.4668Open in IMG/M
3300005545|Ga0070695_101276930All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300005547|Ga0070693_100321286All Organisms → cellular organisms → Bacteria1050Open in IMG/M
3300005549|Ga0070704_100274009All Organisms → cellular organisms → Bacteria → Proteobacteria1395Open in IMG/M
3300005552|Ga0066701_10429708All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300005554|Ga0066661_10869894All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300005555|Ga0066692_10111085All Organisms → cellular organisms → Bacteria1639Open in IMG/M
3300005576|Ga0066708_10588907All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300005598|Ga0066706_10089753All Organisms → cellular organisms → Bacteria2204Open in IMG/M
3300005598|Ga0066706_10969624All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300005713|Ga0066905_102165215All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes518Open in IMG/M
3300005718|Ga0068866_11374436All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300005879|Ga0075295_1058780All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300006031|Ga0066651_10475865All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300006032|Ga0066696_10072243All Organisms → cellular organisms → Bacteria2002Open in IMG/M
3300006034|Ga0066656_10577005All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300006791|Ga0066653_10017870All Organisms → cellular organisms → Bacteria2608Open in IMG/M
3300006846|Ga0075430_100162278All Organisms → cellular organisms → Bacteria1860Open in IMG/M
3300006852|Ga0075433_10072422All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes3030Open in IMG/M
3300006852|Ga0075433_10755550All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes850Open in IMG/M
3300006871|Ga0075434_100910053All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300007076|Ga0075435_100092946All Organisms → cellular organisms → Bacteria2492Open in IMG/M
3300007255|Ga0099791_10184898All Organisms → cellular organisms → Bacteria980Open in IMG/M
3300007788|Ga0099795_10580297All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300009012|Ga0066710_104209015All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300009012|Ga0066710_104254778All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300009090|Ga0099827_10216267All Organisms → cellular organisms → Bacteria1599Open in IMG/M
3300009143|Ga0099792_10637368All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300009597|Ga0105259_1079088All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300010301|Ga0134070_10045851All Organisms → cellular organisms → Bacteria1468Open in IMG/M
3300010301|Ga0134070_10146415All Organisms → cellular organisms → Bacteria845Open in IMG/M
3300010325|Ga0134064_10136549All Organisms → cellular organisms → Bacteria837Open in IMG/M
3300010326|Ga0134065_10091506All Organisms → cellular organisms → Bacteria998Open in IMG/M
3300010329|Ga0134111_10298686All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300010333|Ga0134080_10118455All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1102Open in IMG/M
3300010399|Ga0134127_10054176All Organisms → cellular organisms → Bacteria → Proteobacteria3333Open in IMG/M
3300010400|Ga0134122_10266643All Organisms → cellular organisms → Bacteria1454Open in IMG/M
3300012140|Ga0137351_1012825All Organisms → cellular organisms → Bacteria1030Open in IMG/M
3300012167|Ga0137319_1076900All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300012173|Ga0137327_1006516All Organisms → cellular organisms → Bacteria2152Open in IMG/M
3300012205|Ga0137362_10039544All Organisms → cellular organisms → Bacteria3793Open in IMG/M
3300012208|Ga0137376_10015999All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.5592Open in IMG/M
3300012209|Ga0137379_10004217All Organisms → cellular organisms → Bacteria13492Open in IMG/M
3300012209|Ga0137379_10381165All Organisms → cellular organisms → Bacteria1319Open in IMG/M
3300012351|Ga0137386_10100504All Organisms → cellular organisms → Bacteria2045Open in IMG/M
3300012354|Ga0137366_10064817All Organisms → cellular organisms → Bacteria2787Open in IMG/M
3300012355|Ga0137369_10082405All Organisms → cellular organisms → Bacteria2693Open in IMG/M
3300012363|Ga0137390_10655423All Organisms → cellular organisms → Bacteria1014Open in IMG/M
3300012371|Ga0134022_1036469All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300012373|Ga0134042_1052968All Organisms → cellular organisms → Bacteria1098Open in IMG/M
3300012386|Ga0134046_1209301All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300012388|Ga0134031_1214580All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes627Open in IMG/M
3300012399|Ga0134061_1024922All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300012409|Ga0134045_1499593All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300012912|Ga0157306_10243370All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300012917|Ga0137395_10431059All Organisms → cellular organisms → Bacteria946Open in IMG/M
3300012918|Ga0137396_10208876All Organisms → cellular organisms → Bacteria1436Open in IMG/M
3300012922|Ga0137394_10189251All Organisms → cellular organisms → Bacteria1756Open in IMG/M
3300012923|Ga0137359_10917458All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300012925|Ga0137419_10350259All Organisms → cellular organisms → Bacteria1142Open in IMG/M
3300012927|Ga0137416_11141356All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300012957|Ga0164303_10833053All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300012976|Ga0134076_10186145All Organisms → cellular organisms → Bacteria865Open in IMG/M
3300014154|Ga0134075_10308438All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300014166|Ga0134079_10189773All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300015054|Ga0137420_1073827All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300015358|Ga0134089_10176074All Organisms → cellular organisms → Bacteria853Open in IMG/M
3300017656|Ga0134112_10067799All Organisms → cellular organisms → Bacteria1313Open in IMG/M
3300017656|Ga0134112_10339432All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300017657|Ga0134074_1392355All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300018027|Ga0184605_10409285All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300018063|Ga0184637_10546215All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes666Open in IMG/M
3300018071|Ga0184618_10008217All Organisms → cellular organisms → Bacteria3050Open in IMG/M
3300018468|Ga0066662_10876362All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes879Open in IMG/M
3300020006|Ga0193735_1105632All Organisms → cellular organisms → Bacteria780Open in IMG/M
3300020170|Ga0179594_10067154All Organisms → cellular organisms → Bacteria1243Open in IMG/M
3300021418|Ga0193695_1082339All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300025910|Ga0207684_11052254All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes679Open in IMG/M
3300026296|Ga0209235_1120821All Organisms → cellular organisms → Bacteria1099Open in IMG/M
3300026298|Ga0209236_1005287All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae7856Open in IMG/M
3300026318|Ga0209471_1206060All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300026324|Ga0209470_1036998All Organisms → cellular organisms → Bacteria2447Open in IMG/M
3300026331|Ga0209267_1252299All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300026343|Ga0209159_1110631All Organisms → cellular organisms → Bacteria1179Open in IMG/M
3300026523|Ga0209808_1322080All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300026540|Ga0209376_1138948All Organisms → cellular organisms → Bacteria1180Open in IMG/M
3300026542|Ga0209805_1177851All Organisms → cellular organisms → Bacteria946Open in IMG/M
3300028536|Ga0137415_11117026All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300028719|Ga0307301_10300144All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes527Open in IMG/M
3300028875|Ga0307289_10432563All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes541Open in IMG/M
3300028878|Ga0307278_10414888All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300028881|Ga0307277_10408958All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300031199|Ga0307495_10023163All Organisms → cellular organisms → Bacteria1071Open in IMG/M
3300031740|Ga0307468_101905507All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300032180|Ga0307471_102817480All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300032205|Ga0307472_102742541All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300033417|Ga0214471_10422749All Organisms → cellular organisms → Bacteria1072Open in IMG/M
3300033815|Ga0364946_026786All Organisms → cellular organisms → Bacteria1125Open in IMG/M
3300034164|Ga0364940_0039031All Organisms → cellular organisms → Bacteria1255Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil18.75%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil16.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil16.96%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.04%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil7.14%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.46%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil3.57%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.68%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.68%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.79%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.89%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.89%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.89%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.89%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002912Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cmEnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005879Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009597Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT299EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012140Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT690_2EnvironmentalOpen in IMG/M
3300012167Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT333_2EnvironmentalOpen in IMG/M
3300012173Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2EnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012371Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012373Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012386Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012388Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012399Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012409Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021418Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300033417Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155EnvironmentalOpen in IMG/M
3300033815Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17EnvironmentalOpen in IMG/M
3300034164Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25385J37094_1016152223300002558Grasslands SoilMKETMLKRIPLMLLLAIQALGGGAISLAHARDAVVAPPGFEARHDARCAILH
JGI25383J37093_1006400713300002560Grasslands SoilMLRRIPLSILLAIQAFGGGAITLAHARDAVVAPPGFEASHDARCAILHDELRCALCHYASARVVTPQA
JGI25386J43895_1019529223300002912Grasslands SoilMKEIMLKRLPLAILLALQALGGGAISLAHARDVVVAPPGFEASHTARCSILHDEMRCALC
Ga0062591_10020681133300004643SoilMKEAMLRRIPLLFLLVVQALGGGAITLAHARDVVSAPPGIEASHDARCAILHDEMRCALCHYAGARIVTPPSFTLPASSESIRFSPVEPLL
Ga0070691_1068464113300005341Corn, Switchgrass And Miscanthus RhizosphereMKEAMLKRIPLLFLLVVQALGGGAITLAHARDVVSAPPGIEASHDARCAILHDEMRCALCHYAGARVV
Ga0070694_10011879333300005444Corn, Switchgrass And Miscanthus RhizosphereMLRRIPLAILLAVQALGGGAISLAHARDTVVAPPGFEAGHSARCAILHDELRCALCHYASARVV
Ga0066682_1008972933300005450SoilMKGIMLKRITLAILLTLQALGGGAISLAHARDVVVAPPGFEASHTARCAILHDEMRCALCHYASARVVTQHAFTLAAPATA
Ga0070706_10073489413300005467Corn, Switchgrass And Miscanthus RhizosphereMKETMLKRFPLMLLLAIQAFGGGAITLAHMRDAVVAPPGFESRHDARCAILHDELRCALCQYASARVVRQHVFTLTTPQVAI
Ga0070706_10164740613300005467Corn, Switchgrass And Miscanthus RhizosphereMKEIMLRRIPLAILLAVQALGGGAISLAHARDTVVAPPGFEAGHSARCAILHDELRCALCHYASARVVAPPTFTIPEPTSDVRFAP
Ga0070707_10232295123300005468Corn, Switchgrass And Miscanthus RhizosphereMKEIMRKRIPLAILLALQALGGGAISLAHARDVGVAPPGFEASHTARCAILHDEMRCALCQYAS
Ga0070697_10106543513300005536Corn, Switchgrass And Miscanthus RhizosphereMKEIMVRRISLSILLAIQALGGGAISLAHARDAVVAPPGYEASHTARCAILHDELRCALCHYASARVVTQHAFTLAAPAT
Ga0068853_10226103413300005539Corn RhizosphereMKEAMLKRIPLLFLLVVQALGGGAITLAHARDVVSAPPGIEASHDARCAILHDEMRCALCHYAGARVVTPPSFTLPASSESIRF
Ga0066697_1070674123300005540SoilMKEIMLKRIPLAILLALQALGGGAITLAHARDAVAAPPGFEASHNARCAILHDEM
Ga0070686_10001359013300005544Switchgrass RhizosphereMKEAMLKRIPLLFLLVVQALGGGAITLAHARDVVSAPPGIEASHDARCAILHDEMRCALCHYAGARVVTPPSFTLPASSESIRFSPV
Ga0070695_10127693013300005545Corn, Switchgrass And Miscanthus RhizosphereMKETMLKRIPLMLLLAIQALGGGAISLAHARDAVVAPPGFEASHNARCAILHDELRCALCHYASAR
Ga0070693_10032128623300005547Corn, Switchgrass And Miscanthus RhizosphereMKEAMLKRIPLFLLLVVQALGGGAITLAHARDVVAAPPGVEARHDARCAILHDELRCALCHYAGARIVTPQSFTLPASSESIRFTPVE
Ga0070704_10027400913300005549Corn, Switchgrass And Miscanthus RhizosphereMKEAMLKRLPLILLLVIQALGGGAVTLAHARDVVAAPPGVEASHDARCVILHDEMRCALCHYASARIVSPPVFTFATPSAPVRFT
Ga0066701_1042970813300005552SoilMLRRIALTLLLAIQALGGGAISLAHARDAVVAPPGFEASHNARCAILHDELRCALCHYASARVVTQH
Ga0066661_1086989413300005554SoilMKETMLKRIPLMLLLAIQALGGGAISLAHARDVVVAPPGFEARHDARCGILHDELRCALCHFASARVVMQQAFTLVTPQA
Ga0066692_1011108513300005555SoilMKEIMLKRIALAILLAIQAVGGGAISLAHARDAVVQPPGYEAGHDARCAILHDEMRCALCHYASAR
Ga0066708_1058890723300005576SoilMKEIMLKRIPLAILLALQALGGGAITLAHARDAVAAPPGFEASHNARCAILHDEMRCALCQYASGRVITPQTFTMPEPIGVVR
Ga0066706_1008975313300005598SoilMKEIMLKRIPLAILLALQALGGGAISLAHARDVVVAPPGFEASHTARCSILHDEMRCALC
Ga0066706_1096962423300005598SoilMKEIMLKRIPLAILLALQALGGGAISLAHARDVVVAPPGFEASHTARCAILHDEMRCALCQYASARVVTPPTFTIPERAAGVRFAPEQ
Ga0066905_10216521513300005713Tropical Forest SoilMREIMLKRIPLAILLAIQALGGGAVSLAHARDAVVQPPGYEASHDARCAILHDELRCALCHYASARVVTQQVFTLPTPVVAR
Ga0068866_1137443613300005718Miscanthus RhizosphereMKEAMLKRIPLLFLLVVQALGGGAITLAHARDVVSAPPGIEASHDARCAILHDEMRCALCHYAGARVVTPPS
Ga0075295_105878013300005879Rice Paddy SoilMLKRITLTLLLVIQALGGGAITLAHARDQVTEPPHIEATHSARCAILHDELRCALCHYASARVVT
Ga0066651_1047586523300006031SoilMFKRISLAILLAIQALGGGAVSLAHARDAVVAPPGYEASHSARCAILHDELRCALCQYASARVVTQHAFTLAVPATDV
Ga0066696_1007224333300006032SoilMKEAMLKRVSLTLLLVIQALGGGAISLAHARDPVAEPPHVEASHSARCAILHDELRCALCHYASARAVTQDAFTFTAPARDVRIASAQ
Ga0066656_1057700523300006034SoilMKETMLRQITVSVLLAIQVLGGGAVTLAHARDVLFAPAGVEASHDARCVILHDELRCALCHYAGARVITQQTFTIAT
Ga0066653_1001787043300006791SoilMKGTMVRRIPLAILLVIQALGGGAISLAHAREAVVQPPGYEASHDARCAILHDEMRCALC
Ga0075430_10016227813300006846Populus RhizosphereMKEIMLKRIPLTLFLAIQVLGGGAVTLAHARDVVVAQPGVEASHSARCAILHNELRCALCHYASARAVTQKVFTIEM
Ga0075433_1007242253300006852Populus RhizosphereMKEIMVRRISLSILLAIQAIGGGAVSLAHARDAVVAPPGYEASHSARCAILHDELRCALCQYASARVV
Ga0075433_1075555023300006852Populus RhizosphereMKETMLKRTALGMLLAIQVLGGGAVTLAHARDVVAAPPGVEASHSARCAILHDELRCALCHYANARVVAQQVFTVEIPLAGVRFTHTQSFV
Ga0075434_10091005323300006871Populus RhizosphereMKEIMVRRISLSILLAIQALGGGAISLAHARDAVVAPPGYEASHSARCAILHDELRCALCQYASARVVTQHAFTLAIPATDVRFT
Ga0075435_10009294613300007076Populus RhizosphereMKRTMVRRISLAVLLVIQALGGGAVSFAHARDAVVQPPGYEASHNARCAILHDEMRCALCHYA
Ga0099791_1018489823300007255Vadose Zone SoilMKETMLRRISVGVLLAIQVLGGGAITLAHARDVVFAPAGIEASHDARCAILHDELRCALCHYAGARVVTQ
Ga0099795_1058029723300007788Vadose Zone SoilMKETMLKRIPLMILLVIQALGGGAITLAHARDAVVAPPGFEARHDARCAILHDELRCALCHYASARVVVTQQSFNLVTPRSEIRVVP
Ga0066710_10420901523300009012Grasslands SoilMKRTMLRRISVSVLLAIQVLGGGAVTLAHARDVVFAPAGFEASHDARCAILHDELRCALCHYAGARVI
Ga0066710_10425477823300009012Grasslands SoilMKEIMLKRIPLAILLALQALGGGAITLAHARDAVAAPPGFEASHNARCAILHDE
Ga0099827_1021626733300009090Vadose Zone SoilMLRRIALTLLLGIQALGGGAISLAHAREEAVAPPHFEAAHEHCAVLHDELRCALCHYASARVVTQQAFTLAE
Ga0099792_1063736813300009143Vadose Zone SoilMLRRISLTLLLAIQALGGGAITLAHTRDAVVAPPGFEASHNARCAILHDELRCALCHYASARVVAQQAFTLPTPATTVRVAPVPRV
Ga0105259_107908813300009597SoilMKEIMLKRIPLALLLVIQALGGGAITLAHARDVVAAPPGIEASHNERCAILHDELRCALCHYASARVVTP
Ga0134070_1004585113300010301Grasslands SoilMKGIMLKRITLAILLTLQALGGGAISLAHARDVVVAPPGFEASHTARCAILHD
Ga0134070_1014641523300010301Grasslands SoilMKETMLRQITVSVLLAIQVLGGGAVTLAHARDVLFAPAGFEASHDARCAILHDELRCALCHYAGARVITQQTFTIATPAT
Ga0134064_1013654923300010325Grasslands SoilMLRRISLTLLLAIQALGGGAISLAHARDAVVAPAGFEASHTARCAILHDELRCALCHYASARVVT
Ga0134065_1009150623300010326Grasslands SoilMLRRISLTLLLAIQALGGGAISLAHARDAVVAPAGFEASHTARCAILHDELRCALCHYAS
Ga0134111_1029868623300010329Grasslands SoilMKGIMLKRITLAILLTLQALGGGAISLAHARDVVVAPPGFEASHTARCAILHDEMRCPLCHYASARVVTPPTFTIPERATDVRFAPE
Ga0134080_1011845513300010333Grasslands SoilMKETMLKRISLMLLLAIQALGGGAITLAHARDAVVAPPGFEARHDARCAILHDELRCALCHYASARVVRQQAFTLNTPQVAVRVAPVQP
Ga0134127_1005417613300010399Terrestrial SoilMKEAMLRRIPLLFLLVVQALGGGAITLAHARDVVSAPPGIEASHDARCAILHDEMRCALCHYAGARIVTP
Ga0134122_1026664333300010400Terrestrial SoilMLKRFPLMLLLAIQAFGGGAITLAHMRDAVVAPPGFESRHDARCAILHD
Ga0137351_101282513300012140SoilMAKRIPLILLLVVQALGGGAITLAHSRDVVAAPPGVEASHDGRCAILHDQMRCALCHYASARVVTQ*
Ga0137319_107690023300012167SoilMKEIMLKRIPLALLLVIQVLGGGAITLAHARDVVVAPPGIEASHNERCAILHDELRCALCHYASARVVTPPAFTIVAPA
Ga0137327_100651613300012173SoilMVKRIPLILLLVVQALGGGAITLAHARDAVAESAHIEASHDTQCAILHDEVRCALCHYAGARVITQQVLLSLEPSDIIR
Ga0137362_1003954453300012205Vadose Zone SoilMLKRIPLMLLLAIQAFGGGAITLAHARDAVTAPPGFEARHDGRCAILHDELRCALCHYASAR
Ga0137376_1001599913300012208Vadose Zone SoilMKETMLKRISLMLLLAIQALGGGAITLAHARDAVVAPPGFEARHDARCAILHDELRCALCHYASARVVRQQAFTLNTPQVAVR
Ga0137379_10004217173300012209Vadose Zone SoilMLRRIALTLLLAIQALGGGAISLAHARDAVVAPPGFEASHNARCAILHDELRCALC
Ga0137379_1038116513300012209Vadose Zone SoilMFKRISLAILLAIQALGGGAVSLAHARDAVVAPPGYEASHSARCAILHDELRCALCQYASARIVTQHAFTL
Ga0137386_1010050413300012351Vadose Zone SoilMLRRIALTLLLAIQALGGGAVSLAHARDAVVAPPGYEASHSARCAILHDELRCALCQYASARVVTQHAFTLAVPATDVRFTPV
Ga0137366_1006481743300012354Vadose Zone SoilMFKRISLAILLVIQALGGGAVSLAHARDAVVAPPGYEASHSARCAILHDELRCALCQY
Ga0137369_1008240543300012355Vadose Zone SoilMLRRIPLMLLLAIQALGGGAISLAHAREEVVAPPGFEAAHEHCAVLHDELRCALCHYASARVVTQ
Ga0137390_1065542313300012363Vadose Zone SoilMKETMLKRIPLMLLLAIQALGGGAITLAHARDAVVAPPGFESRHDARCAILHDELRCA
Ga0134022_103646913300012371Grasslands SoilMKEIMLKRIPLAILLALQALGGGAITLAHARDAVAAPPGFEASHNARCAILHDEMRCALCHYASGRVITPQTFTMPEPIGVVRFA
Ga0134042_105296833300012373Grasslands SoilMLRRISLTLLLAIQALGGGAITLAHARDAVAPPPGFEASHNARCAILH
Ga0134046_120930123300012386Grasslands SoilMLRRISLTLLLAIQALGGGAITLAHARDAVAPPPGFEASHNARCAILHDELRCALCHYAS
Ga0134031_121458023300012388Grasslands SoilMVRRIPLAILLVIQALGGGAISLAHAREAVVQPPGYEASHDARCAILHDEMRCALCHYASTHVVTQQVFALPAPVVARRVTPAQTA*
Ga0134061_102492213300012399Grasslands SoilMKETMLKRIPLMLLLVIQALGGGAITLAHARDVLVAPPGFEASHNARCAILHDELRCALCHYASARVVTQQAFTLS
Ga0134045_149959323300012409Grasslands SoilMLKRIPLMLLLVIQALGGGAITLAHARDAVVAPPGFEARHDARCAILHDELRCALCHYASARVVRQQAFTLN
Ga0157306_1024337023300012912SoilMKEAMLRRIPLLFLLVVQALGGGVITLAHARDVVSAPPGIEASHDARCAIL
Ga0137395_1043105913300012917Vadose Zone SoilMKETMLKRIPLMLLLAIQAFGGGAITLAHARDAVTAPPGFEARHDGRCAILHDELRCALCHYASARVV
Ga0137396_1020887613300012918Vadose Zone SoilMKEIMLKRISLMLLLAIQALGGGAITLAHARDAVVAPPGFEARHDARCAILHDELRCALCHYASARVV
Ga0137394_1018925133300012922Vadose Zone SoilMKETMLRRISVSVLLAIQGLGGGAITLAHARDVVFAPAGFEASHDARCAILHDELRCALCHYAGARVITQQTFTVAIPAATVH
Ga0137359_1091745823300012923Vadose Zone SoilMKEIMVRRISLGILLAIQALGGGAVSLAHSRDAVVAPPGYEASHSARCTILHDELRCA
Ga0137419_1035025913300012925Vadose Zone SoilMKETMLKRIPLMLLLAIQALGGGAITLAHARDAVVAPPGFEARHDARCAI
Ga0137416_1114135623300012927Vadose Zone SoilMKEIMVRRISLSILLAIQALGGGAVSLAHVRDAVVAPPGYEASHSARCAILHDELRCALCHYAGARVVTQEAFRFAAPASAVRVI
Ga0164303_1083305323300012957SoilMLKRTLLTLLLIIQAVGGGAVSLAHARDLVTEPPHIEATHGAGCAILHDELRCALCHYASTGVITPDAV
Ga0134076_1018614513300012976Grasslands SoilMKETMLKRIALMLLLAIQALGGGAISLAHARDAVVAPPGFEARHDARCAILHDELRCAL
Ga0134075_1030843823300014154Grasslands SoilMKEIMLKRFALAILLALQALGGGAITLAHARDALVAPPGFEASHTARCAILHDE
Ga0134079_1018977323300014166Grasslands SoilMLKRIPLMLLVAIQALGGGAISLAHARDVVVAPPGFEARHDARCGILHDELRCALCHYAS
Ga0137420_107382713300015054Vadose Zone SoilMKGTMLRRISVSVLLAIQGLGGGAITLAHARDVVFAPAGFEASHDARCAILHDELRCALCHYAGARVVTQQTFTVAIPAATVHLRRRSSRLFP
Ga0134089_1017607423300015358Grasslands SoilMLRRISLTLLLAIQALGGGAITLAHARDAVVAPPGFEASHNARCAILHDELRCALCHYAS
Ga0134112_1006779933300017656Grasslands SoilMLRRISLTLLLAIQALGGGAITLAHARDAVVAPPGFEASHNARCAILHDELRCALCHYASARVVTQHAFTLPTPATTVRFA
Ga0134112_1033943213300017656Grasslands SoilMKETMLKRISLMLLLAIQALGGGAITLAHARDVLVAPPGFEASHNARCAILHDELRCALCHYASARVVTQQAFTLSTPRAA
Ga0134074_139235523300017657Grasslands SoilMKEIMLKRIALAILLAIQAAGGGAISLAHARDAVVQPPGYEAGHDARCAILHDEMRCALCHYAS
Ga0184605_1040928523300018027Groundwater SedimentMKETMLKRIPLMLLLAIQALGGGAITLAHARDAVVAPPRFEAQHDGRCAILHDELRCALCHYASARVVTPQTFTLAIPTIGI
Ga0184637_1054621513300018063Groundwater SedimentMKENMLRRIPLAILLAIQALGGGAITLAHARDIVVAPPGFEASHDGRCAILHDELRCALCQYASARVVTPQTVTIPAPAKTIRFTPVQP
Ga0184618_1000821713300018071Groundwater SedimentMKETMLKRIPLTILLAIQAFGGGAITLAHARDVVVAPPGFEASHNARCAILHDELRC
Ga0066662_1087636213300018468Grasslands SoilMLKRIALAMLLAIQVLGGGAVTLAHARDVVAAPPGVEASHTARCAILHDELRCALCQYANAHIVSQQVFTVEIPLAGVRFTHTQPS
Ga0193735_110563213300020006SoilMLKRIPLMLLLAIQALGAGAITLAHARDAVVAPPRFEAQHDGRCAILHDELRCALCHYA
Ga0179594_1006715433300020170Vadose Zone SoilMLRRISLTLLLAIQALGGGAITLAHTRDAVVAPPGFEASHNARCAILHDELRCALCHYASARVVTQQAFTLPTPATT
Ga0193695_108233923300021418SoilMKETMLKRIPLMLLLAIQALGGGAITLAHARDVVVAPPGFEARHDARCGILHDELRCALCHYA
Ga0207684_1105225413300025910Corn, Switchgrass And Miscanthus RhizosphereMKEIMLRRIPLAILLAVQALGGGAISLAHARDTVVAPPGFEAGHSARCAILHDELRCALCHYASARVVAPPTFTIPEPTSDVRFAPEQPAI
Ga0209235_112082123300026296Grasslands SoilMKETMLRRIPLSILLAIQAFGGGAITLAHARDAVVAPPGFEASHDARCAILHDELRCALCHYASARVV
Ga0209236_1005287103300026298Grasslands SoilMKETMLKRIPLMLLLAIQALGGGAISLAHARDAVVAPPGFEARHDARCAILHDELRCALC
Ga0209471_120606023300026318SoilMKEIMLKRLPLAILLALQALGGGAISLAHARDVVVAPPGFEASHTARCSILHDEMRCALCHYASARVVTQHAFTLAA
Ga0209470_103699843300026324SoilMKETMLKRISLMLLLAIQALGGGAITLAHARDAVVAPPGFEARHDARCAILHDELRCA
Ga0209267_125229913300026331SoilMLKRISLMLLLAIQTLGGGAITLAHARDAVVAPPGFEARHDARCAILHDELRCAICQYAS
Ga0209159_111063133300026343SoilMKGIMLKRITLAILLTLQALGGGAISLAHARDVVVAPPGFEASHTARCAILHDEMRCALCHYASARVVTPPTFTIP
Ga0209808_132208023300026523SoilMLKRIPLMLLVAIQALGGGAISLAHARDVVVAPPAFEARHDARCGILHDELRCALCHY
Ga0209376_113894833300026540SoilMKEIMLKRIPLAILLALQALGGGAITLAHARDALVAPPGFEASHTARCAILHDEMRCALCHYA
Ga0209805_117785113300026542SoilMKETMLKRIPLMLLLAIQALGGGAISLAHARDVVVAPPGFEARHDARCGILHDELRCALCHF
Ga0137415_1111702623300028536Vadose Zone SoilMKETMLKRIPLMLLLAIQALGGGAITLAHARDVVVAPPGFEARHDARCAILHDELRCALCQYASARVVTQR
Ga0307301_1030014423300028719SoilMLRRISLTLLLAIQALGGGAITLAHARDAVVAPPGFEASHNARCAILHDE
Ga0307289_1043256323300028875SoilMLRRISLTLLLAIQALGGGAITLAHARDAVVAPPGFEASHNARCAILHDELRCALCHYASARVVTQQAFTLPTPAITVRVAPVPR
Ga0307278_1041488823300028878SoilMKETMLKRIPLMLLLAIQALGGGAITLAHARDAVVAPPGFEARHDGRCAILHDELRC
Ga0307277_1040895823300028881SoilMLRRISLTLLLAIQALGGGAITLAHTRDAVVAPPGFEASHNARCAILHDELRCALCQ
Ga0307495_1002316313300031199SoilMKEIMLKRIALAILLAIQAVGGGAISLAHARDAVVQPPGYEAGHDARCAILHDEMRCALCHYASARVVTQQVFTLPAPATMVRFAPLPPA
Ga0307468_10190550713300031740Hardwood Forest SoilMKRTMPKRIALSILLAIQMLGGSAVTLAHARDVVVAQPGVEASHSARCAILHDE
Ga0307471_10281748023300032180Hardwood Forest SoilMKRTMPKRIALSILLAIQMLGGSAVTLAHARDVVVAQQGVEASHSARCAILHDELRCALCHYASARVVAQQTMAVPAVP
Ga0307472_10274254123300032205Hardwood Forest SoilMKEIMRKRIPLAILLALQALGGGAISLAHARDVGVAPPGFEASHTARCAILHD
Ga0214471_1042274913300033417SoilMKEIMLTRIPLAILLAIQAVGGGAITLAHARDVAAAPPGFEASHDGRCAILHDELRCALCHYASARVVTP
Ga0364946_026786_967_11253300033815SedimentMKENMLRRIPLAILLAIQALGGGAITLAHARDVVVAPPGFEASHDGQCAILHD
Ga0364940_0039031_3_2633300034164SedimentMKAMLRVLLFVQVFGGGAITLAHARDVVTAPPGIEASHDGRCAILHDELRCALCHYAGARVVVQQTVFTPAAQVARVQPLRTPPGIA

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.